Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:54:26 (3266974): wrapper (7.7.26015): starting
22:54:26 (3266974): wrapper: running run_atlas (--nthreads 9)
[2025-12-02 22:54:26] Arguments: --nthreads 9
[2025-12-02 22:54:26] Threads: 9
[2025-12-02 22:54:26] Checking for CVMFS
[2025-12-02 22:54:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 22:54:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 22:54:26] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 22:54:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 22:54:26] 2.13.3.0 4548 3298 92396 153579 0 101 7463546 37030913 1910 16776704 0 3857373 99.805 801344 47377 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 22:54:26] CVMFS is ok
[2025-12-02 22:54:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 22:54:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 22:54:26] Further information can be found at the LHC@home message board.
[2025-12-02 22:54:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 22:54:26] Checking for apptainer binary...
[2025-12-02 22:54:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 22:54:26] Running /usr/bin/apptainer --version
[2025-12-02 22:54:26] apptainer version 1.4.4-1.el9
[2025-12-02 22:54:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 22:54:26] c-205-36.aglt2.org
[2025-12-02 22:54:26] apptainer works
[2025-12-02 22:54:26] Set ATHENA_PROC_NUMBER=9
[2025-12-02 22:54:26] Set ATHENA_CORE_NUMBER=9
[2025-12-02 22:54:26] Starting ATLAS job with PandaID=6895369854
[2025-12-02 22:54:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 07:34:31]  *** The last 200 lines of the pilot log: ***
[2025-12-03 07:34:31] 2025-12-03 12:33:51,792 | INFO     | time since job start (31154s) is within the limit (172800.0s)
[2025-12-03 07:34:31] 2025-12-03 12:33:52,221 | INFO     | monitor loop #2313: job 0:6895369854 is in state 'finished'
[2025-12-03 07:34:31] 2025-12-03 12:33:52,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 07:34:31] 2025-12-03 12:33:53,047 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 07:34:31] 2025-12-03 12:33:53,053 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2637.4393750000004
[2025-12-03 07:34:31] 2025-12-03 12:33:53,059 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895369854/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 07:34:31] 2025-12-03 12:33:53,060 | INFO     | extracted standard info from prmon json
[2025-12-03 07:34:31] 2025-12-03 12:33:53,060 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 07:34:31] 2025-12-03 12:33:53,060 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 07:34:31] 2025-12-03 12:33:53,071 | INFO     | fitting pss+swap vs Time
[2025-12-03 07:34:31] 2025-12-03 12:33:53,072 | INFO     | sum of square deviations: 41375043283.929306
[2025-12-03 07:34:31] 2025-12-03 12:33:53,078 | INFO     | sum of deviations: 649872665130.4338
[2025-12-03 07:34:31] 2025-12-03 12:33:53,078 | INFO     | mean x: 1764749656.0117416
[2025-12-03 07:34:31] 2025-12-03 12:33:53,079 | INFO     | mean y: 3106943.927592955
[2025-12-03 07:34:31] 2025-12-03 12:33:53,079 | INFO     | intersect: -27715596680.6273
[2025-12-03 07:34:31] 2025-12-03 12:33:53,080 | INFO     | chi2: 5.00863664280256
[2025-12-03 07:34:31] 2025-12-03 12:33:53,080 | INFO     | sum of square deviations: 40172352796.428894
[2025-12-03 07:34:31] 2025-12-03 12:33:53,087 | INFO     | sum of deviations: 821246945337.8315
[2025-12-03 07:34:31] 2025-12-03 12:33:53,087 | INFO     | mean x: 1764749503.5118577
[2025-12-03 07:34:31] 2025-12-03 12:33:53,087 | INFO     | mean y: 3128648.4446640317
[2025-12-03 07:34:31] 2025-12-03 12:33:53,087 | INFO     | intersect: -36073800835.61589
[2025-12-03 07:34:31] 2025-12-03 12:33:53,088 | INFO     | chi2: 2.053340446020521
[2025-12-03 07:34:31] 2025-12-03 12:33:53,088 | INFO     | current chi2=2.053340446020521 (change=59.00400463325318 %)
[2025-12-03 07:34:31] 2025-12-03 12:33:53,089 | INFO     | sum of square deviations: 38993197633.92808
[2025-12-03 07:34:31] 2025-12-03 12:33:53,095 | INFO     | sum of deviations: 831761034393.4739
[2025-12-03 07:34:31] 2025-12-03 12:33:53,095 | INFO     | mean x: 1764749351.011976
[2025-12-03 07:34:31] 2025-12-03 12:33:53,096 | INFO     | mean y: 3129988.754491018
[2025-12-03 07:34:31] 2025-12-03 12:33:53,096 | INFO     | intersect: -37640608783.92193
[2025-12-03 07:34:31] 2025-12-03 12:33:53,096 | INFO     | chi2: 1.912887380493339
[2025-12-03 07:34:31] 2025-12-03 12:33:53,097 | INFO     | current chi2=1.912887380493339 (change=6.84022300341802 %)
[2025-12-03 07:34:31] 2025-12-03 12:33:53,097 | INFO     | right removable region: 500
[2025-12-03 07:34:31] 2025-12-03 12:33:53,098 | INFO     | sum of square deviations: 40172349136.42889
[2025-12-03 07:34:31] 2025-12-03 12:33:53,104 | INFO     | sum of deviations: 519617002909.37427
[2025-12-03 07:34:31] 2025-12-03 12:33:53,104 | INFO     | mean x: 1764749808.5118577
[2025-12-03 07:34:31] 2025-12-03 12:33:53,104 | INFO     | mean y: 3123408.1877470356
[2025-12-03 07:34:31] 2025-12-03 12:33:53,105 | INFO     | intersect: -22823373575.337666
[2025-12-03 07:34:31] 2025-12-03 12:33:53,105 | INFO     | chi2: 3.21148838566663
[2025-12-03 07:34:31] 2025-12-03 12:33:53,105 | INFO     | current chi2=3.21148838566663 (change=35.88098688928538 %)
[2025-12-03 07:34:31] 2025-12-03 12:33:53,106 | INFO     | sum of square deviations: 38993190313.928085
[2025-12-03 07:34:31] 2025-12-03 12:33:53,112 | INFO     | sum of deviations: 489346299396.70575
[2025-12-03 07:34:31] 2025-12-03 12:33:53,113 | INFO     | mean x: 1764749961.011976
[2025-12-03 07:34:31] 2025-12-03 12:33:53,113 | INFO     | mean y: 3127319.2155688624
[2025-12-03 07:34:31] 2025-12-03 12:33:53,113 | INFO     | intersect: -22143659230.67155
[2025-12-03 07:34:31] 2025-12-03 12:33:53,114 | INFO     | chi2: 3.194372690624065
[2025-12-03 07:34:31] 2025-12-03 12:33:53,114 | INFO     | current chi2=3.194372690624065 (change=0.5329521077813896 %)
[2025-12-03 07:34:31] 2025-12-03 12:33:53,114 | INFO     | left removable region: 20
[2025-12-03 07:34:31] 2025-12-03 12:33:53,115 | INFO     | sum of square deviations: 34292488589.925068
[2025-12-03 07:34:31] 2025-12-03 12:33:53,120 | INFO     | sum of deviations: 633196172599.0997
[2025-12-03 07:34:31] 2025-12-03 12:33:53,120 | INFO     | mean x: 1764749930.5125
[2025-12-03 07:34:31] 2025-12-03 12:33:53,121 | INFO     | mean y: 3155718.15
[2025-12-03 07:34:31] 2025-12-03 12:33:53,121 | INFO     | intersect: -32582198904.47536
[2025-12-03 07:34:31] 2025-12-03 12:33:53,121 | INFO     | chi2: 0.06795950162367995
[2025-12-03 07:34:31] 2025-12-03 12:33:53,122 | INFO     | current memory leak: 18.46 B/s (using 480 data points, chi2=0.07)
[2025-12-03 07:34:31] 2025-12-03 12:33:53,122 | INFO     | could have reported an average CPU frequency of 2612 MHz (21 samples)
[2025-12-03 07:34:31] 2025-12-03 12:33:53,123 | INFO     | ..............................
[2025-12-03 07:34:31] 2025-12-03 12:33:53,123 | INFO     | . Timing measurements:
[2025-12-03 07:34:31] 2025-12-03 12:33:53,123 | INFO     | . get job = 0 s
[2025-12-03 07:34:31] 2025-12-03 12:33:53,123 | INFO     | . initial setup = 2 s
[2025-12-03 07:34:31] 2025-12-03 12:33:53,123 | INFO     | . payload setup = 5 s
[2025-12-03 07:34:31] 2025-12-03 12:33:53,123 | INFO     | . stage-in = 0 s
[2025-12-03 07:34:31] 2025-12-03 12:33:53,123 | INFO     | . payload execution = 31120 s
[2025-12-03 07:34:31] 2025-12-03 12:33:53,124 | INFO     | . stage-out = 3 s
[2025-12-03 07:34:31] 2025-12-03 12:33:53,124 | INFO     | . log creation = 0 s
[2025-12-03 07:34:31] 2025-12-03 12:33:53,124 | INFO     | ..............................
[2025-12-03 07:34:31] 2025-12-03 12:33:53,233 | INFO     | 
[2025-12-03 07:34:31] 2025-12-03 12:33:53,234 | INFO     | job summary report
[2025-12-03 07:34:31] 2025-12-03 12:33:53,234 | INFO     | --------------------------------------------------
[2025-12-03 07:34:31] 2025-12-03 12:33:53,234 | INFO     | PanDA job id: 6895369854
[2025-12-03 07:34:31] 2025-12-03 12:33:53,234 | INFO     | task id: 47556137
[2025-12-03 07:34:31] 2025-12-03 12:33:53,234 | INFO     | errors: (none)
[2025-12-03 07:34:31] 2025-12-03 12:33:53,234 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 07:34:31] 2025-12-03 12:33:53,234 | INFO     | pilot state: finished 
[2025-12-03 07:34:31] 2025-12-03 12:33:53,235 | INFO     | transexitcode: 0
[2025-12-03 07:34:31] 2025-12-03 12:33:53,235 | INFO     | exeerrorcode: 0
[2025-12-03 07:34:31] 2025-12-03 12:33:53,235 | INFO     | exeerrordiag: 
[2025-12-03 07:34:31] 2025-12-03 12:33:53,235 | INFO     | exitcode: 0
[2025-12-03 07:34:31] 2025-12-03 12:33:53,235 | INFO     | exitmsg: OK
[2025-12-03 07:34:31] 2025-12-03 12:33:53,235 | INFO     | cpuconsumptiontime: 275404 s
[2025-12-03 07:34:31] 2025-12-03 12:33:53,235 | INFO     | nevents: 1000
[2025-12-03 07:34:31] 2025-12-03 12:33:53,235 | INFO     | neventsw: 0
[2025-12-03 07:34:31] 2025-12-03 12:33:53,235 | INFO     | pid: 3277058
[2025-12-03 07:34:31] 2025-12-03 12:33:53,236 | INFO     | pgrp: 3277058
[2025-12-03 07:34:31] 2025-12-03 12:33:53,236 | INFO     | corecount: 9
[2025-12-03 07:34:31] 2025-12-03 12:33:53,236 | INFO     | event service: False
[2025-12-03 07:34:31] 2025-12-03 12:33:53,236 | INFO     | sizes: {0: 2284093, 1: 2284292, 4: 2284554, 11: 2284582, 31129: 2323860, 31134: 2332854, 31137: 2333038, 31141: 2333284}
[2025-12-03 07:34:31] 2025-12-03 12:33:53,236 | INFO     | --------------------------------------------------
[2025-12-03 07:34:31] 2025-12-03 12:33:53,236 | INFO     | 
[2025-12-03 07:34:31] 2025-12-03 12:33:53,236 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-03 07:34:31] 2025-12-03 12:33:53,253 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 07:34:31] 2025-12-03 12:33:53,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,255 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 07:34:31] 2025-12-03 12:33:53,256 | INFO     | job 6895369854 has completed (purged errors)
[2025-12-03 07:34:31] 2025-12-03 12:33:53,256 | INFO     | overall cleanup function is called
[2025-12-03 07:34:31] 2025-12-03 12:33:54,272 | INFO     | --- collectZombieJob: --- 10, [3277058]
[2025-12-03 07:34:31] 2025-12-03 12:33:54,273 | INFO     | zombie collector waiting for pid 3277058
[2025-12-03 07:34:31] 2025-12-03 12:33:54,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 07:34:31] 2025-12-03 12:33:54,273 | INFO     | collected zombie processes
[2025-12-03 07:34:31] 2025-12-03 12:33:54,273 | INFO     | will attempt to kill all subprocesses of pid=3277058
[2025-12-03 07:34:31] 2025-12-03 12:33:54,468 | INFO     | process IDs to be killed: [3277058] (in reverse order)
[2025-12-03 07:34:31] 2025-12-03 12:33:54,522 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 07:34:31] 2025-12-03 12:33:54,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 07:34:31] 2025-12-03 12:33:54,528 | INFO     | did not find any defunct processes belonging to 3277058
[2025-12-03 07:34:31] 2025-12-03 12:33:54,532 | INFO     | did not find any defunct processes belonging to 3277058
[2025-12-03 07:34:31] 2025-12-03 12:33:54,534 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 07:34:31] 2025-12-03 12:33:54,534 | INFO     | ready for new job
[2025-12-03 07:34:31] 2025-12-03 12:33:54,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 07:34:31] 2025-12-03 12:33:54,537 | INFO     | ***************************************
[2025-12-03 07:34:31] 2025-12-03 12:33:54,537 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 07:34:31] 2025-12-03 12:33:54,538 | INFO     | ***************************************
[2025-12-03 07:34:31] 2025-12-03 12:33:54,538 | INFO     | 
[2025-12-03 07:34:31] 2025-12-03 12:33:54,540 | INFO     | architecture information:
[2025-12-03 07:34:31] 2025-12-03 12:33:54,540 | INFO     | executing command: cat /etc/os-release
[2025-12-03 07:34:31] 2025-12-03 12:33:54,552 | INFO     | cat /etc/os-release:
[2025-12-03 07:34:31] NAME="CentOS Linux"
[2025-12-03 07:34:31] VERSION="7 (Core)"
[2025-12-03 07:34:31] ID="centos"
[2025-12-03 07:34:31] ID_LIKE="rhel fedora"
[2025-12-03 07:34:31] VERSION_ID="7"
[2025-12-03 07:34:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 07:34:31] ANSI_COLOR="0;31"
[2025-12-03 07:34:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 07:34:31] HOME_URL="https://www.centos.org/"
[2025-12-03 07:34:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 07:34:31] 
[2025-12-03 07:34:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 07:34:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 07:34:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 07:34:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 07:34:31] 
[2025-12-03 07:34:31] 2025-12-03 12:33:54,552 | INFO     | ***************************************
[2025-12-03 07:34:31] 2025-12-03 12:33:55,055 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-03 07:34:31] 2025-12-03 12:33:55,069 | INFO     | sufficient remaining disk space (38946209792 B)
[2025-12-03 07:34:31] 2025-12-03 12:33:55,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 07:34:31] 2025-12-03 12:33:55,069 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 07:34:31] 2025-12-03 12:33:55,070 | INFO     | update_server=False
[2025-12-03 07:34:31] 2025-12-03 12:33:55,070 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 07:34:31] 2025-12-03 12:33:55,070 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 07:34:31] 2025-12-03 12:33:55,070 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 07:34:31] 2025-12-03 12:33:55,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 07:34:31] 2025-12-03 12:33:55,369 | INFO     | all job control threads have been joined
[2025-12-03 07:34:31] 2025-12-03 12:33:55,406 | INFO     | all data control threads have been joined
[2025-12-03 07:34:31] 2025-12-03 12:33:55,735 | INFO     | all payload control threads have been joined
[2025-12-03 07:34:31] 2025-12-03 12:33:55,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 07:34:31] 2025-12-03 12:33:55,740 | INFO     | aborting loop
[2025-12-03 07:34:31] 2025-12-03 12:33:56,075 | INFO     | [job] retrieve thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:56,076 | INFO     | [job] queue monitor thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:56,375 | INFO     | [job] control thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:56,412 | INFO     | [data] control thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:56,612 | INFO     | [data] copytool_in thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:56,705 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:56,741 | INFO     | [payload] control thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:56,745 | INFO     | [job] job monitor thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:56,930 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:57,017 | INFO     | [payload] validate_post thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:57,076 | INFO     | [data] copytool_out thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:57,089 | INFO     | [job] validate thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:57,298 | INFO     | [payload] failed_post thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:57,343 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:57,482 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:33:59,217 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 07:34:31] 2025-12-03 12:34:25,117 | INFO     | PID=3270666 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 07:34:31] 2025-12-03 12:34:25,117 | INFO     | .. there are 3 such processes running
[2025-12-03 07:34:31] 2025-12-03 12:34:25,117 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 07:34:31] 2025-12-03 12:34:25,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 07:34:31] 2025-12-03 12:34:25,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 07:34:31] 2025-12-03 12:34:25,468 | INFO     | [monitor] cgroup control has ended
[2025-12-03 07:34:31] 2025-12-03 12:34:26,100 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455286417216)>', '<ExcThread(monitor, started 140454783854336)>']
[2025-12-03 07:34:31] 2025-12-03 12:34:26,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 07:34:31] 2025-12-03 12:34:26,123 | INFO     | [monitor] control thread has ended
[2025-12-03 07:34:31] 2025-12-03 12:34:31,125 | INFO     | all workflow threads have been joined
[2025-12-03 07:34:31] 2025-12-03 12:34:31,126 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 07:34:31] 2025-12-03 12:34:31,126 | INFO     | traces error code: 0
[2025-12-03 07:34:31] 2025-12-03 12:34:31,126 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 07:34:31] 2025-12-03 12:34:31,232 [wrapper] ==== pilot stdout END ====
[2025-12-03 07:34:31] 2025-12-03 12:34:31,234 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 07:34:31] 2025-12-03 12:34:31,236 [wrapper] pilotpid: 3270666
[2025-12-03 07:34:31] 2025-12-03 12:34:31,238 [wrapper] Pilot exit status: 0
[2025-12-03 07:34:31] 2025-12-03 12:34:31,246 [wrapper] pandaids: 6895369854
[2025-12-03 07:34:31] 2025-12-03 12:34:31,282 [wrapper] cleanup supervisor_pilot 3755124 3270667
[2025-12-03 07:34:31] 2025-12-03 12:34:31,284 [wrapper] Test setup, not cleaning
[2025-12-03 07:34:31] 2025-12-03 12:34:31,287 [wrapper] apfmon messages muted
[2025-12-03 07:34:31] 2025-12-03 12:34:31,289 [wrapper] ==== wrapper stdout END ====
[2025-12-03 07:34:31] 2025-12-03 12:34:31,291 [wrapper] ==== wrapper stderr END ====
[2025-12-03 07:34:31]  *** Error codes and diagnostics ***
[2025-12-03 07:34:31]     "exeErrorCode": 0,
[2025-12-03 07:34:31]     "exeErrorDiag": "",
[2025-12-03 07:34:31]     "pilotErrorCode": 0,
[2025-12-03 07:34:31]     "pilotErrorDiag": "",
[2025-12-03 07:34:31]  *** Listing of results directory ***
[2025-12-03 07:34:31] total 1312168
[2025-12-03 07:34:31] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 15:16 pilot3.tar.gz
[2025-12-03 07:34:31] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 15:34 queuedata.json
[2025-12-03 07:34:31] -rwx------. 1 boincer umatlas     36292 Nov 23 15:35 runpilot2-wrapper.sh
[2025-12-03 07:34:31] -rw-r--r--. 1 boincer umatlas       100 Dec  2 22:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 07:34:31] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 22:54 run_atlas
[2025-12-03 07:34:31] -rw-r--r--. 1 boincer umatlas       105 Dec  2 22:54 job.xml
[2025-12-03 07:34:31] -rw-r--r--. 2 boincer umatlas 407289607 Dec  2 22:54 EVNT.47483658._000893.pool.root.1
[2025-12-03 07:34:31] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 22:54 start_atlas.sh
[2025-12-03 07:34:31] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 22:54 shared
[2025-12-03 07:34:31] -rw-r--r--. 2 boincer umatlas    590108 Dec  2 22:54 input.tar.gz
[2025-12-03 07:34:31] -rw-r--r--. 1 boincer umatlas         0 Dec  2 22:54 boinc_lockfile
[2025-12-03 07:34:31] -rw-r--r--. 1 boincer umatlas      2785 Dec  2 22:54 pandaJob.out
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas    989300 Dec  2 22:54 agis_schedconf.cvmfs.json
[2025-12-03 07:34:31] drwx------. 5 boincer umatlas      4096 Dec  2 22:54 pilot3
[2025-12-03 07:34:31] -rw-r--r--. 1 boincer umatlas       533 Dec  3 07:25 boinc_task_state.xml
[2025-12-03 07:34:31] -rw-r--r--. 1 boincer umatlas      6527 Dec  3 07:31 init_data.xml
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas 919777187 Dec  3 07:33 HITS.47556137._008797.pool.root.1
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas      1045 Dec  3 07:33 memory_monitor_summary.json
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas   1516240 Dec  3 07:33 agis_ddmendpoints.agis.ALL.json
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas   1897143 Dec  3 07:33 log.47556137._008797.job.log.tgz.1
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas        95 Dec  3 07:33 pilot_heartbeat.json
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas      8615 Dec  3 07:33 heartbeat.json
[2025-12-03 07:34:31] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 07:34 boinc_mmap_file
[2025-12-03 07:34:31] -rw-r--r--. 1 boincer umatlas        29 Dec  3 07:34 wrapper_checkpoint.txt
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas      4823 Dec  3 07:34 pilotlog.txt
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas   4440392 Dec  3 07:34 log.47556137._008797.job.log.1
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas       353 Dec  3 07:34 output.list
[2025-12-03 07:34:31] -rw-r--r--. 1 boincer umatlas       620 Dec  3 07:34 runtime_log
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas   6359040 Dec  3 07:34 result.tar.gz
[2025-12-03 07:34:31] -rw-r--r--. 1 boincer umatlas      8818 Dec  3 07:34 runtime_log.err
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas       659 Dec  3 07:34 aaeMDm6yVh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmokIKDm6jn2tn.diag
[2025-12-03 07:34:31] -rw-r--r--. 1 boincer umatlas     21312 Dec  3 07:34 stderr.txt
[2025-12-03 07:34:31] HITS file was successfully produced:
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas 919777187 Dec  3 07:33 shared/HITS.pool.root.1
[2025-12-03 07:34:31]  *** Contents of shared directory: ***
[2025-12-03 07:34:31] total 1302780
[2025-12-03 07:34:31] -rw-r--r--. 2 boincer umatlas 407289607 Dec  2 22:54 ATLAS.root_0
[2025-12-03 07:34:31] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 22:54 start_atlas.sh
[2025-12-03 07:34:31] -rw-r--r--. 2 boincer umatlas    590108 Dec  2 22:54 input.tar.gz
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas 919777187 Dec  3 07:33 HITS.pool.root.1
[2025-12-03 07:34:31] -rw-------. 1 boincer umatlas   6359040 Dec  3 07:34 result.tar.gz
07:34:33 (3266974): run_atlas exited; CPU time 275769.898987
07:34:33 (3266974): called boinc_finish(0)

</stderr_txt>
]]>

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