Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:47:44 (3737729): wrapper (7.7.26015): starting
18:47:44 (3737729): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 18:47:44] Arguments: --nthreads 8
[2025-12-02 18:47:44] Threads: 8
[2025-12-02 18:47:44] Checking for CVMFS
[2025-12-02 18:47:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 18:47:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 18:47:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 18:47:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 18:47:47] 2.13.3.0 9438 39347 325408 153574 0 833 33635949 40960001 60628 16776704 0 585039855 99.779 335239758 45367 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 18:47:47] CVMFS is ok
[2025-12-02 18:47:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 18:47:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 18:47:47] Further information can be found at the LHC@home message board.
[2025-12-02 18:47:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 18:47:47] Checking for apptainer binary...
[2025-12-02 18:47:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 18:47:47] Running /usr/bin/apptainer --version
[2025-12-02 18:47:47] apptainer version 1.4.4-1.el9
[2025-12-02 18:47:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 18:47:48] c8-7-3.aglt2.org
[2025-12-02 18:47:48] apptainer works
[2025-12-02 18:47:48] Set ATHENA_PROC_NUMBER=8
[2025-12-02 18:47:48] Set ATHENA_CORE_NUMBER=8
[2025-12-02 18:47:48] Starting ATLAS job with PandaID=6895333982
[2025-12-02 18:47:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 05:57:47]  *** The last 200 lines of the pilot log: ***
[2025-12-03 05:57:47] 2025-12-03 10:56:49,617 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 05:57:47] 2025-12-03 10:56:49,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 05:57:47] 2025-12-03 10:56:49,624 | INFO     | fitting pss+swap vs Time
[2025-12-03 05:57:47] 2025-12-03 10:56:49,625 | INFO     | sum of square deviations: 85547405307.12749
[2025-12-03 05:57:47] 2025-12-03 10:56:49,647 | INFO     | sum of deviations: 1471231584494.9539
[2025-12-03 05:57:47] 2025-12-03 10:56:49,659 | INFO     | mean x: 1764739512.592934
[2025-12-03 05:57:47] 2025-12-03 10:56:49,659 | INFO     | mean y: 2834134.2073732717
[2025-12-03 05:57:47] 2025-12-03 10:56:49,659 | INFO     | intersect: -30346894183.229244
[2025-12-03 05:57:47] 2025-12-03 10:56:49,659 | INFO     | chi2: 15.128997270570402
[2025-12-03 05:57:47] 2025-12-03 10:56:49,660 | INFO     | sum of square deviations: 83591619786.84203
[2025-12-03 05:57:47] 2025-12-03 10:56:49,690 | INFO     | sum of deviations: 1638148350670.3157
[2025-12-03 05:57:47] 2025-12-03 10:56:49,690 | INFO     | mean x: 1764739360.1052632
[2025-12-03 05:57:47] 2025-12-03 10:56:49,690 | INFO     | mean y: 2847132.3482972137
[2025-12-03 05:57:47] 2025-12-03 10:56:49,690 | INFO     | intersect: -34580821415.90103
[2025-12-03 05:57:47] 2025-12-03 10:56:49,690 | INFO     | chi2: 13.054003013617452
[2025-12-03 05:57:47] 2025-12-03 10:56:49,691 | INFO     | current chi2=13.054003013617452 (change=13.715345570121299 %)
[2025-12-03 05:57:47] 2025-12-03 10:56:49,691 | INFO     | right removable region: 645
[2025-12-03 05:57:47] 2025-12-03 10:56:49,691 | INFO     | sum of square deviations: 83590987216.84212
[2025-12-03 05:57:47] 2025-12-03 10:56:49,710 | INFO     | sum of deviations: 1196002647693.3691
[2025-12-03 05:57:47] 2025-12-03 10:56:49,710 | INFO     | mean x: 1764739665.1052632
[2025-12-03 05:57:47] 2025-12-03 10:56:49,710 | INFO     | mean y: 2855588.068111455
[2025-12-03 05:57:47] 2025-12-03 10:56:49,710 | INFO     | intersect: -25246676475.481304
[2025-12-03 05:57:47] 2025-12-03 10:56:49,711 | INFO     | chi2: 9.954744660203971
[2025-12-03 05:57:47] 2025-12-03 10:56:49,711 | INFO     | current chi2=9.954744660203971 (change=34.200895920786614 %)
[2025-12-03 05:57:47] 2025-12-03 10:56:49,711 | INFO     | sum of square deviations: 81664616201.3571
[2025-12-03 05:57:47] 2025-12-03 10:56:49,716 | INFO     | sum of deviations: 956074157605.5729
[2025-12-03 05:57:47] 2025-12-03 10:56:49,716 | INFO     | mean x: 1764739817.6177847
[2025-12-03 05:57:47] 2025-12-03 10:56:49,716 | INFO     | mean y: 2874582.177847114
[2025-12-03 05:57:47] 2025-12-03 10:56:49,716 | INFO     | intersect: -20657507024.977707
[2025-12-03 05:57:47] 2025-12-03 10:56:49,716 | INFO     | chi2: 6.232595091871392
[2025-12-03 05:57:47] 2025-12-03 10:56:49,717 | INFO     | current chi2=6.232595091871392 (change=37.390708605642054 %)
[2025-12-03 05:57:47] 2025-12-03 10:56:49,717 | INFO     | sum of square deviations: 79768059698.16818
[2025-12-03 05:57:47] 2025-12-03 10:56:49,722 | INFO     | sum of deviations: 727561273975.3914
[2025-12-03 05:57:47] 2025-12-03 10:56:49,722 | INFO     | mean x: 1764739970.1305032
[2025-12-03 05:57:47] 2025-12-03 10:56:49,722 | INFO     | mean y: 2892950.995283019
[2025-12-03 05:57:47] 2025-12-03 10:56:49,722 | INFO     | intersect: -16093229554.199965
[2025-12-03 05:57:47] 2025-12-03 10:56:49,722 | INFO     | chi2: 2.9718356370041312
[2025-12-03 05:57:47] 2025-12-03 10:56:49,722 | INFO     | current chi2=2.9718356370041312 (change=52.31784524427029 %)
[2025-12-03 05:57:47] 2025-12-03 10:56:49,723 | INFO     | sum of square deviations: 77901162739.33788
[2025-12-03 05:57:47] 2025-12-03 10:56:49,727 | INFO     | sum of deviations: 634659132463.0095
[2025-12-03 05:57:47] 2025-12-03 10:56:49,727 | INFO     | mean x: 1764740122.6402535
[2025-12-03 05:57:47] 2025-12-03 10:56:49,727 | INFO     | mean y: 2900524.440570523
[2025-12-03 05:57:47] 2025-12-03 10:56:49,727 | INFO     | intersect: -14374400094.359512
[2025-12-03 05:57:47] 2025-12-03 10:56:49,728 | INFO     | chi2: 2.3999138853050415
[2025-12-03 05:57:47] 2025-12-03 10:56:49,728 | INFO     | current chi2=2.3999138853050415 (change=19.24473024610596 %)
[2025-12-03 05:57:47] 2025-12-03 10:56:49,728 | INFO     | left removable region: 40
[2025-12-03 05:57:47] 2025-12-03 10:56:49,728 | INFO     | sum of square deviations: 68662395981.19993
[2025-12-03 05:57:47] 2025-12-03 10:56:49,733 | INFO     | sum of deviations: 680477022436.764
[2025-12-03 05:57:47] 2025-12-03 10:56:49,733 | INFO     | mean x: 1764740549.6727273
[2025-12-03 05:57:47] 2025-12-03 10:56:49,733 | INFO     | mean y: 2926920.1553719006
[2025-12-03 05:57:47] 2025-12-03 10:56:49,733 | INFO     | intersect: -17486491814.13287
[2025-12-03 05:57:47] 2025-12-03 10:56:49,733 | INFO     | chi2: 0.0631809931133944
[2025-12-03 05:57:47] 2025-12-03 10:56:49,733 | INFO     | current memory leak: 9.91 B/s (using 605 data points, chi2=0.06)
[2025-12-03 05:57:47] 2025-12-03 10:56:49,734 | INFO     | could have reported an average CPU frequency of 3790 MHz (25 samples)
[2025-12-03 05:57:47] 2025-12-03 10:56:49,734 | INFO     | ..............................
[2025-12-03 05:57:47] 2025-12-03 10:56:49,734 | INFO     | . Timing measurements:
[2025-12-03 05:57:47] 2025-12-03 10:56:49,734 | INFO     | . get job = 0 s
[2025-12-03 05:57:47] 2025-12-03 10:56:49,734 | INFO     | . initial setup = 9 s
[2025-12-03 05:57:47] 2025-12-03 10:56:49,734 | INFO     | . payload setup = 82 s
[2025-12-03 05:57:47] 2025-12-03 10:56:49,734 | INFO     | . stage-in = 0 s
[2025-12-03 05:57:47] 2025-12-03 10:56:49,734 | INFO     | . payload execution = 39781 s
[2025-12-03 05:57:47] 2025-12-03 10:56:49,734 | INFO     | . stage-out = 3 s
[2025-12-03 05:57:47] 2025-12-03 10:56:49,734 | INFO     | . log creation = 0 s
[2025-12-03 05:57:47] 2025-12-03 10:56:49,735 | INFO     | ..............................
[2025-12-03 05:57:47] 2025-12-03 10:56:49,836 | INFO     | 
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | job summary report
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | --------------------------------------------------
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | PanDA job id: 6895333982
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | task id: 47556137
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | errors: (none)
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | pilot state: finished 
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | transexitcode: 0
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | exeerrorcode: 0
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | exeerrordiag: 
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | exitcode: 0
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | exitmsg: OK
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | cpuconsumptiontime: 137243 s
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | nevents: 1000
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | neventsw: 0
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | pid: 3868369
[2025-12-03 05:57:47] 2025-12-03 10:56:49,837 | INFO     | pgrp: 3868369
[2025-12-03 05:57:47] 2025-12-03 10:56:49,838 | INFO     | corecount: 8
[2025-12-03 05:57:47] 2025-12-03 10:56:49,838 | INFO     | event service: False
[2025-12-03 05:57:47] 2025-12-03 10:56:49,838 | INFO     | sizes: {0: 2284093, 1: 2284292, 12: 2284292, 23: 2284320, 34: 2284348, 44: 2284376, 50: 2284794, 55: 2284822, 39867: 2327799, 39871: 2336793, 39872: 2336849, 39883
[2025-12-03 05:57:47] 2025-12-03 10:56:49,838 | INFO     | --------------------------------------------------
[2025-12-03 05:57:47] 2025-12-03 10:56:49,838 | INFO     | 
[2025-12-03 05:57:47] 2025-12-03 10:56:49,838 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-12-03 05:57:47] 2025-12-03 10:56:49,907 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | job 6895333982 has completed (purged errors)
[2025-12-03 05:57:47] 2025-12-03 10:56:49,908 | INFO     | overall cleanup function is called
[2025-12-03 05:57:47] 2025-12-03 10:56:50,922 | INFO     | --- collectZombieJob: --- 10, [3868369]
[2025-12-03 05:57:47] 2025-12-03 10:56:50,922 | INFO     | zombie collector waiting for pid 3868369
[2025-12-03 05:57:47] 2025-12-03 10:56:50,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 05:57:47] 2025-12-03 10:56:50,922 | INFO     | collected zombie processes
[2025-12-03 05:57:47] 2025-12-03 10:56:50,922 | INFO     | will attempt to kill all subprocesses of pid=3868369
[2025-12-03 05:57:47] 2025-12-03 10:56:51,426 | INFO     | process IDs to be killed: [3868369] (in reverse order)
[2025-12-03 05:57:47] 2025-12-03 10:56:51,608 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 05:57:47] 2025-12-03 10:56:51,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 05:57:47] 2025-12-03 10:56:51,637 | INFO     | did not find any defunct processes belonging to 3868369
[2025-12-03 05:57:47] 2025-12-03 10:56:51,664 | INFO     | did not find any defunct processes belonging to 3868369
[2025-12-03 05:57:47] 2025-12-03 10:56:51,665 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 05:57:47] 2025-12-03 10:56:51,666 | INFO     | ready for new job
[2025-12-03 05:57:47] 2025-12-03 10:56:51,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 05:57:47] 2025-12-03 10:56:51,669 | INFO     | ***************************************
[2025-12-03 05:57:47] 2025-12-03 10:56:51,669 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 05:57:47] 2025-12-03 10:56:51,669 | INFO     | ***************************************
[2025-12-03 05:57:47] 2025-12-03 10:56:51,669 | INFO     | 
[2025-12-03 05:57:47] 2025-12-03 10:56:51,684 | INFO     | architecture information:
[2025-12-03 05:57:47] 2025-12-03 10:56:51,688 | INFO     | executing command: cat /etc/os-release
[2025-12-03 05:57:47] 2025-12-03 10:56:51,711 | INFO     | cat /etc/os-release:
[2025-12-03 05:57:47] NAME="CentOS Linux"
[2025-12-03 05:57:47] VERSION="7 (Core)"
[2025-12-03 05:57:47] ID="centos"
[2025-12-03 05:57:47] ID_LIKE="rhel fedora"
[2025-12-03 05:57:47] VERSION_ID="7"
[2025-12-03 05:57:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 05:57:47] ANSI_COLOR="0;31"
[2025-12-03 05:57:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 05:57:47] HOME_URL="https://www.centos.org/"
[2025-12-03 05:57:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 05:57:47] 
[2025-12-03 05:57:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 05:57:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 05:57:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 05:57:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 05:57:47] 
[2025-12-03 05:57:47] 2025-12-03 10:56:51,711 | INFO     | ***************************************
[2025-12-03 05:57:47] 2025-12-03 10:56:52,215 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-12-03 05:57:47] 2025-12-03 10:56:52,245 | INFO     | sufficient remaining disk space (166752944128 B)
[2025-12-03 05:57:47] 2025-12-03 10:56:52,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 05:57:47] 2025-12-03 10:56:52,246 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 05:57:47] 2025-12-03 10:56:52,246 | INFO     | update_server=False
[2025-12-03 05:57:47] 2025-12-03 10:56:52,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 05:57:47] 2025-12-03 10:56:52,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 05:57:47] 2025-12-03 10:56:52,247 | INFO     | aborting loop
[2025-12-03 05:57:47] 2025-12-03 10:56:52,247 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 05:57:47] 2025-12-03 10:56:52,578 | INFO     | all payload control threads have been joined
[2025-12-03 05:57:47] 2025-12-03 10:56:52,910 | INFO     | all job control threads have been joined
[2025-12-03 05:57:47] 2025-12-03 10:56:53,156 | INFO     | all data control threads have been joined
[2025-12-03 05:57:47] 2025-12-03 10:56:53,251 | INFO     | [job] retrieve thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:53,252 | INFO     | [job] job monitor thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:53,318 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:53,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 05:57:47] 2025-12-03 10:56:53,582 | INFO     | [data] copytool_in thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:53,593 | INFO     | [payload] control thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:53,620 | INFO     | [job] validate thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:53,624 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:53,916 | INFO     | [job] control thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:53,963 | INFO     | [payload] failed_post thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:54,073 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:54,161 | INFO     | [data] control thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:54,253 | INFO     | [data] copytool_out thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:54,601 | INFO     | [payload] validate_post thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:54,671 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:54,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 05:57:47] 2025-12-03 10:56:55,853 | INFO     | [job] queue monitor thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:56:57,535 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 05:57:47] 2025-12-03 10:57:22,967 | INFO     | PID=3802790 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 05:57:47] 2025-12-03 10:57:22,968 | INFO     | .. there are 26 such processes running
[2025-12-03 05:57:47] 2025-12-03 10:57:22,968 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 05:57:47] 2025-12-03 10:57:22,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 05:57:47] 2025-12-03 10:57:22,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 05:57:47] 2025-12-03 10:57:41,221 | INFO     | [monitor] cgroup control has ended
[2025-12-03 05:57:47] 2025-12-03 10:57:41,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140039347717952)>', '<ExcThread(monitor, started 140038264313600)>']
[2025-12-03 05:57:47] 2025-12-03 10:57:42,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 05:57:47] 2025-12-03 10:57:42,083 | INFO     | [monitor] control thread has ended
[2025-12-03 05:57:47] 2025-12-03 10:57:46,695 | INFO     | all workflow threads have been joined
[2025-12-03 05:57:47] 2025-12-03 10:57:46,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 05:57:47] 2025-12-03 10:57:46,695 | INFO     | traces error code: 0
[2025-12-03 05:57:47] 2025-12-03 10:57:46,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 05:57:47] 2025-12-03 10:57:46,994 [wrapper] ==== pilot stdout END ====
[2025-12-03 05:57:47] 2025-12-03 10:57:47,008 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 05:57:47] 2025-12-03 10:57:47,022 [wrapper] pilotpid: 3802790
[2025-12-03 05:57:47] 2025-12-03 10:57:47,030 [wrapper] Pilot exit status: 0
[2025-12-03 05:57:47] 2025-12-03 10:57:47,077 [wrapper] pandaids: 6895333982
[2025-12-03 05:57:47] 2025-12-03 10:57:47,230 [wrapper] cleanup supervisor_pilot 1029819 3802791
[2025-12-03 05:57:47] 2025-12-03 10:57:47,244 [wrapper] Test setup, not cleaning
[2025-12-03 05:57:47] 2025-12-03 10:57:47,248 [wrapper] apfmon messages muted
[2025-12-03 05:57:47] 2025-12-03 10:57:47,255 [wrapper] ==== wrapper stdout END ====
[2025-12-03 05:57:47] 2025-12-03 10:57:47,260 [wrapper] ==== wrapper stderr END ====
[2025-12-03 05:57:47]  *** Error codes and diagnostics ***
[2025-12-03 05:57:47]     "exeErrorCode": 0,
[2025-12-03 05:57:47]     "exeErrorDiag": "",
[2025-12-03 05:57:47]     "pilotErrorCode": 0,
[2025-12-03 05:57:47]     "pilotErrorDiag": "",
[2025-12-03 05:57:47]  *** Listing of results directory ***
[2025-12-03 05:57:47] total 1324704
[2025-12-03 05:57:47] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 20:38 pilot3.tar.gz
[2025-12-03 05:57:47] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 21:08 queuedata.json
[2025-12-03 05:57:47] -rwx------. 1 boincer umatlas     36292 Nov 21 21:09 runpilot2-wrapper.sh
[2025-12-03 05:57:47] -rw-r--r--. 1 boincer umatlas       100 Dec  2 18:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 05:57:47] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 18:47 run_atlas
[2025-12-03 05:57:47] -rw-r--r--. 1 boincer umatlas       105 Dec  2 18:47 job.xml
[2025-12-03 05:57:47] -rw-r--r--. 2 boincer umatlas 409896366 Dec  2 18:47 EVNT.47483658._000216.pool.root.1
[2025-12-03 05:57:47] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 18:47 start_atlas.sh
[2025-12-03 05:57:47] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 18:47 shared
[2025-12-03 05:57:47] -rw-r--r--. 2 boincer umatlas    590101 Dec  2 18:47 input.tar.gz
[2025-12-03 05:57:47] -rw-r--r--. 1 boincer umatlas         0 Dec  2 18:47 boinc_lockfile
[2025-12-03 05:57:47] -rw-r--r--. 1 boincer umatlas      2785 Dec  2 18:47 pandaJob.out
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas        57 Dec  2 18:47 setup.sh.local
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas    989284 Dec  2 18:50 agis_schedconf.cvmfs.json
[2025-12-03 05:57:47] drwx------. 5 boincer umatlas      4096 Dec  2 18:50 pilot3
[2025-12-03 05:57:47] -rw-r--r--. 1 boincer umatlas       533 Dec  3 05:49 boinc_task_state.xml
[2025-12-03 05:57:47] -rw-r--r--. 1 boincer umatlas      7174 Dec  3 05:54 init_data.xml
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas 929535866 Dec  3 05:56 HITS.47556137._002130.pool.root.1
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas      1064 Dec  3 05:56 memory_monitor_summary.json
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas   1516240 Dec  3 05:56 agis_ddmendpoints.agis.ALL.json
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas   1854875 Dec  3 05:56 log.47556137._002130.job.log.tgz.1
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas      8620 Dec  3 05:56 heartbeat.json
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas        95 Dec  3 05:57 pilot_heartbeat.json
[2025-12-03 05:57:47] -rw-r--r--. 1 boincer umatlas        29 Dec  3 05:57 wrapper_checkpoint.txt
[2025-12-03 05:57:47] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 05:57 boinc_mmap_file
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas      4825 Dec  3 05:57 pilotlog.txt
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas   4717228 Dec  3 05:57 log.47556137._002130.job.log.1
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas       353 Dec  3 05:57 output.list
[2025-12-03 05:57:47] -rw-r--r--. 1 boincer umatlas       620 Dec  3 05:57 runtime_log
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas   6594560 Dec  3 05:57 result.tar.gz
[2025-12-03 05:57:47] -rw-r--r--. 1 boincer umatlas      9333 Dec  3 05:57 runtime_log.err
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas       663 Dec  3 05:57 F40KDm2Esg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1tHKDmGV5hyn.diag
[2025-12-03 05:57:47] -rw-r--r--. 1 boincer umatlas     21175 Dec  3 05:57 stderr.txt
[2025-12-03 05:57:47] HITS file was successfully produced:
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas 929535866 Dec  3 05:56 shared/HITS.pool.root.1
[2025-12-03 05:57:47]  *** Contents of shared directory: ***
[2025-12-03 05:57:47] total 1315088
[2025-12-03 05:57:47] -rw-r--r--. 2 boincer umatlas 409896366 Dec  2 18:47 ATLAS.root_0
[2025-12-03 05:57:47] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 18:47 start_atlas.sh
[2025-12-03 05:57:47] -rw-r--r--. 2 boincer umatlas    590101 Dec  2 18:47 input.tar.gz
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas 929535866 Dec  3 05:56 HITS.pool.root.1
[2025-12-03 05:57:47] -rw-------. 1 boincer umatlas   6594560 Dec  3 05:57 result.tar.gz
05:57:49 (3737729): run_atlas exited; CPU time 138047.172568
05:57:49 (3737729): called boinc_finish(0)

</stderr_txt>
]]>

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