Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:52:38 (17056): wrapper (7.7.26015): starting
03:52:38 (17056): wrapper: running run_atlas (--nthreads 8)
[2025-12-03 03:52:38] Arguments: --nthreads 8
[2025-12-03 03:52:38] Threads: 8
[2025-12-03 03:52:38] Checking for CVMFS
[2025-12-03 03:52:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 03:52:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 03:52:38] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 03:52:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 03:52:38] 2.11.0.0 4833 75404 93104 153577 1 108 3690110 4096000 2104 130560 1 5384038 99.391 5601246 559 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-12-03 03:52:38] CVMFS is ok
[2025-12-03 03:52:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 03:52:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 03:52:38] Further information can be found at the LHC@home message board.
[2025-12-03 03:52:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 03:52:38] Checking for apptainer binary...
[2025-12-03 03:52:38] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-12-03 03:52:38] apptainer is not installed, using version from CVMFS
[2025-12-03 03:52:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 03:52:38] WARNING: Environment variable TMPDIR already has value [/tmp/job_10946843/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node382
[2025-12-03 03:52:38] apptainer works
[2025-12-03 03:52:38] Set ATHENA_PROC_NUMBER=8
[2025-12-03 03:52:38] Set ATHENA_CORE_NUMBER=8
[2025-12-03 03:52:38] Starting ATLAS job with PandaID=6895475294
[2025-12-03 03:52:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10946843/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 08:47:19]  *** The last 200 lines of the pilot log: ***
[2025-12-03 08:47:19] 2025-12-03 07:46:24,490 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-03 08:47:19] 2025-12-03 07:46:24,664 | INFO     | time since job start (17621s) is within the limit (172800.0s)
[2025-12-03 08:47:19] 2025-12-03 07:46:26,669 | INFO     | time since job start (17623s) is within the limit (172800.0s)
[2025-12-03 08:47:19] 2025-12-03 07:46:26,710 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 08:47:19] 2025-12-03 07:46:26,730 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2472.3960234375
[2025-12-03 08:47:19] 2025-12-03 07:46:26,741 | INFO     | using path: /tmp/job_10946843/atlas/pilot/slots/0/PanDA_Pilot-6895475294/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 08:47:19] 2025-12-03 07:46:26,741 | INFO     | extracted standard info from prmon json
[2025-12-03 08:47:19] 2025-12-03 07:46:26,741 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 08:47:19] 2025-12-03 07:46:26,741 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 08:47:19] 2025-12-03 07:46:26,744 | INFO     | fitting pss+swap vs Time
[2025-12-03 08:47:19] 2025-12-03 07:46:26,744 | INFO     | sum of square deviations: 7484568240.0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,745 | INFO     | sum of deviations: 153250223932.99994
[2025-12-03 08:47:19] 2025-12-03 07:46:26,746 | INFO     | mean x: 1764739166.0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,746 | INFO     | mean y: 2890021.60899654
[2025-12-03 08:47:19] 2025-12-03 07:46:26,746 | INFO     | intersect: -36131014259.933846
[2025-12-03 08:47:19] 2025-12-03 07:46:26,746 | INFO     | chi2: 3.871593499986757
[2025-12-03 08:47:19] 2025-12-03 07:46:26,746 | INFO     | sum of square deviations: 7102775035.0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,747 | INFO     | sum of deviations: 216699211398.49994
[2025-12-03 08:47:19] 2025-12-03 07:46:26,747 | INFO     | mean x: 1764739013.5
[2025-12-03 08:47:19] 2025-12-03 07:46:26,747 | INFO     | mean y: 2915291.01056338
[2025-12-03 08:47:19] 2025-12-03 07:46:26,747 | INFO     | intersect: -53837668236.582
[2025-12-03 08:47:19] 2025-12-03 07:46:26,747 | INFO     | chi2: 2.315679687783632
[2025-12-03 08:47:19] 2025-12-03 07:46:26,748 | INFO     | current chi2=2.315679687783632 (change=40.187943600185484 %)
[2025-12-03 08:47:19] 2025-12-03 07:46:26,748 | INFO     | sum of square deviations: 6734191380.0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,749 | INFO     | sum of deviations: 213802761727.0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,749 | INFO     | mean x: 1764738861.0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,749 | INFO     | mean y: 2914065.204301075
[2025-12-03 08:47:19] 2025-12-03 07:46:26,749 | INFO     | intersect: -56025496907.68973
[2025-12-03 08:47:19] 2025-12-03 07:46:26,749 | INFO     | chi2: 2.279672526016744
[2025-12-03 08:47:19] 2025-12-03 07:46:26,749 | INFO     | current chi2=2.279672526016744 (change=1.5549284280051245 %)
[2025-12-03 08:47:19] 2025-12-03 07:46:26,749 | INFO     | right removable region: 278
[2025-12-03 08:47:19] 2025-12-03 07:46:26,749 | INFO     | sum of square deviations: 7102775035.0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,751 | INFO     | sum of deviations: 80074687525.5
[2025-12-03 08:47:19] 2025-12-03 07:46:26,751 | INFO     | mean x: 1764739318.5
[2025-12-03 08:47:19] 2025-12-03 07:46:26,751 | INFO     | mean y: 2919085.6725352113
[2025-12-03 08:47:19] 2025-12-03 07:46:26,751 | INFO     | intersect: -19892255518.129528
[2025-12-03 08:47:19] 2025-12-03 07:46:26,751 | INFO     | chi2: 1.6813904653600884
[2025-12-03 08:47:19] 2025-12-03 07:46:26,751 | INFO     | current chi2=1.6813904653600884 (change=56.571100107337216 %)
[2025-12-03 08:47:19] 2025-12-03 07:46:26,751 | INFO     | sum of square deviations: 6734191380.0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,752 | INFO     | sum of deviations: 66485178620.99997
[2025-12-03 08:47:19] 2025-12-03 07:46:26,752 | INFO     | mean x: 1764739471.0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,752 | INFO     | mean y: 2924702.9569892474
[2025-12-03 08:47:19] 2025-12-03 07:46:26,752 | INFO     | intersect: -17419956876.77085
[2025-12-03 08:47:19] 2025-12-03 07:46:26,753 | INFO     | chi2: 1.6575255589591942
[2025-12-03 08:47:19] 2025-12-03 07:46:26,753 | INFO     | current chi2=1.6575255589591942 (change=1.4193554021244728 %)
[2025-12-03 08:47:19] 2025-12-03 07:46:26,753 | INFO     | left removable region: 20
[2025-12-03 08:47:19] 2025-12-03 07:46:26,753 | INFO     | sum of square deviations: 5325139844.5
[2025-12-03 08:47:19] 2025-12-03 07:46:26,754 | INFO     | sum of deviations: 103994094115.00002
[2025-12-03 08:47:19] 2025-12-03 07:46:26,754 | INFO     | mean x: 1764739440.5
[2025-12-03 08:47:19] 2025-12-03 07:46:26,754 | INFO     | mean y: 2961215.031007752
[2025-12-03 08:47:19] 2025-12-03 07:46:26,754 | INFO     | intersect: -34460449103.3587
[2025-12-03 08:47:19] 2025-12-03 07:46:26,754 | INFO     | chi2: 0.026110486015493022
[2025-12-03 08:47:19] 2025-12-03 07:46:26,754 | INFO     | current memory leak: 19.53 B/s (using 258 data points, chi2=0.03)
[2025-12-03 08:47:19] 2025-12-03 07:46:26,754 | INFO     | could have reported an average CPU frequency of 2513 MHz (13 samples)
[2025-12-03 08:47:19] 2025-12-03 07:46:26,754 | INFO     | ..............................
[2025-12-03 08:47:19] 2025-12-03 07:46:26,754 | INFO     | . Timing measurements:
[2025-12-03 08:47:19] 2025-12-03 07:46:26,754 | INFO     | . get job = 0 s
[2025-12-03 08:47:19] 2025-12-03 07:46:26,754 | INFO     | . initial setup = 1 s
[2025-12-03 08:47:19] 2025-12-03 07:46:26,755 | INFO     | . payload setup = 2 s
[2025-12-03 08:47:19] 2025-12-03 07:46:26,755 | INFO     | . stage-in = 0 s
[2025-12-03 08:47:19] 2025-12-03 07:46:26,755 | INFO     | . payload execution = 17597 s
[2025-12-03 08:47:19] 2025-12-03 07:46:26,755 | INFO     | . stage-out = 1 s
[2025-12-03 08:47:19] 2025-12-03 07:46:26,755 | INFO     | . log creation = 0 s
[2025-12-03 08:47:19] 2025-12-03 07:46:26,755 | INFO     | ..............................
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | 
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | job summary report
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | --------------------------------------------------
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | PanDA job id: 6895475294
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | task id: 47556149
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | errors: (none)
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | pilot state: finished 
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | transexitcode: 0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | exeerrorcode: 0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | exeerrordiag: 
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | exitcode: 0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | exitmsg: OK
[2025-12-03 08:47:19] 2025-12-03 07:46:26,806 | INFO     | cpuconsumptiontime: 130915 s
[2025-12-03 08:47:19] 2025-12-03 07:46:26,807 | INFO     | nevents: 1000
[2025-12-03 08:47:19] 2025-12-03 07:46:26,807 | INFO     | neventsw: 0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,807 | INFO     | pid: 11923
[2025-12-03 08:47:19] 2025-12-03 07:46:26,807 | INFO     | pgrp: 11923
[2025-12-03 08:47:19] 2025-12-03 07:46:26,807 | INFO     | corecount: 8
[2025-12-03 08:47:19] 2025-12-03 07:46:26,807 | INFO     | event service: False
[2025-12-03 08:47:19] 2025-12-03 07:46:26,807 | INFO     | sizes: {0: 2284441, 3: 2284703, 11: 2284731, 17604: 2317640, 17606: 2326720, 17610: 2326938}
[2025-12-03 08:47:19] 2025-12-03 07:46:26,807 | INFO     | --------------------------------------------------
[2025-12-03 08:47:19] 2025-12-03 07:46:26,807 | INFO     | 
[2025-12-03 08:47:19] 2025-12-03 07:46:26,807 | INFO     | executing command: ls -lF /tmp/job_10946843/atlas/pilot/slots/0
[2025-12-03 08:47:19] 2025-12-03 07:46:26,816 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,816 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,816 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,816 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | job 6895475294 has completed (purged errors)
[2025-12-03 08:47:19] 2025-12-03 07:46:26,817 | INFO     | overall cleanup function is called
[2025-12-03 08:47:19] 2025-12-03 07:46:27,825 | INFO     | --- collectZombieJob: --- 10, [11923]
[2025-12-03 08:47:19] 2025-12-03 07:46:27,825 | INFO     | zombie collector waiting for pid 11923
[2025-12-03 08:47:19] 2025-12-03 07:46:27,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 08:47:19] 2025-12-03 07:46:27,825 | INFO     | collected zombie processes
[2025-12-03 08:47:19] 2025-12-03 07:46:27,825 | INFO     | will attempt to kill all subprocesses of pid=11923
[2025-12-03 08:47:19] 2025-12-03 07:46:27,986 | INFO     | process IDs to be killed: [11923] (in reverse order)
[2025-12-03 08:47:19] 2025-12-03 07:46:28,038 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 08:47:19] 2025-12-03 07:46:28,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 08:47:19] 2025-12-03 07:46:28,044 | INFO     | did not find any defunct processes belonging to 11923
[2025-12-03 08:47:19] 2025-12-03 07:46:28,049 | INFO     | did not find any defunct processes belonging to 11923
[2025-12-03 08:47:19] 2025-12-03 07:46:28,050 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 08:47:19] 2025-12-03 07:46:28,050 | INFO     | ready for new job
[2025-12-03 08:47:19] 2025-12-03 07:46:28,050 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 08:47:19] 2025-12-03 07:46:28,051 | INFO     | ***************************************
[2025-12-03 08:47:19] 2025-12-03 07:46:28,051 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 08:47:19] 2025-12-03 07:46:28,051 | INFO     | ***************************************
[2025-12-03 08:47:19] 2025-12-03 07:46:28,051 | INFO     | 
[2025-12-03 08:47:19] 2025-12-03 07:46:28,067 | INFO     | architecture information:
[2025-12-03 08:47:19] 2025-12-03 07:46:28,067 | INFO     | executing command: cat /etc/os-release
[2025-12-03 08:47:19] 2025-12-03 07:46:28,075 | INFO     | cat /etc/os-release:
[2025-12-03 08:47:19] NAME="CentOS Linux"
[2025-12-03 08:47:19] VERSION="7 (Core)"
[2025-12-03 08:47:19] ID="centos"
[2025-12-03 08:47:19] ID_LIKE="rhel fedora"
[2025-12-03 08:47:19] VERSION_ID="7"
[2025-12-03 08:47:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 08:47:19] ANSI_COLOR="0;31"
[2025-12-03 08:47:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 08:47:19] HOME_URL="https://www.centos.org/"
[2025-12-03 08:47:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 08:47:19] 
[2025-12-03 08:47:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 08:47:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 08:47:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 08:47:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 08:47:19] 
[2025-12-03 08:47:19] 2025-12-03 07:46:28,075 | INFO     | ***************************************
[2025-12-03 08:47:19] 2025-12-03 07:46:28,578 | INFO     | executing command: df -mP /tmp/job_10946843/atlas/pilot/slots/0
[2025-12-03 08:47:19] 2025-12-03 07:46:28,585 | INFO     | sufficient remaining disk space (220635070464 B)
[2025-12-03 08:47:19] 2025-12-03 07:46:28,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 08:47:19] 2025-12-03 07:46:28,585 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 08:47:19] 2025-12-03 07:46:28,585 | INFO     | update_server=False
[2025-12-03 08:47:19] 2025-12-03 07:46:28,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 08:47:19] 2025-12-03 07:46:28,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 08:47:19] 2025-12-03 07:46:28,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 08:47:19] 2025-12-03 07:46:28,586 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-03 08:47:19] 2025-12-03 07:46:28,586 | INFO     | aborting loop
[2025-12-03 08:47:19] 2025-12-03 07:46:28,586 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 08:47:19] 2025-12-03 07:46:28,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 08:47:19] 2025-12-03 07:46:28,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 08:47:19] 2025-12-03 07:46:29,017 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 08:47:19] 2025-12-03 07:46:29,566 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 08:47:19] 2025-12-03 07:46:29,581 | INFO     | all payload control threads have been joined
[2025-12-03 08:47:19] 2025-12-03 07:46:29,591 | INFO     | [job] retrieve thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:29,591 | INFO     | [job] queue monitor thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:29,591 | INFO     | [job] job monitor thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:29,618 | INFO     | all data control threads have been joined
[2025-12-03 08:47:19] 2025-12-03 07:46:29,627 | INFO     | [job] validate thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:29,898 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:29,902 | INFO     | [payload] validate_post thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:29,919 | INFO     | all job control threads have been joined
[2025-12-03 08:47:19] 2025-12-03 07:46:30,111 | INFO     | [data] copytool_in thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:30,400 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:30,586 | INFO     | [payload] control thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:30,623 | INFO     | [data] control thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:30,637 | INFO     | [payload] failed_post thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:30,849 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:30,924 | INFO     | [job] control thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:31,022 | INFO     | [data] copytool_out thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:33,571 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:46:39,147 | INFO     | job.realtimelogging is not enabled
[2025-12-03 08:47:19] 2025-12-03 07:46:40,152 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 08:47:19] 2025-12-03 07:47:12,934 | INFO     | [monitor] cgroup control has ended
[2025-12-03 08:47:19] 2025-12-03 07:47:14,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2025-12-03 08:47:19] 2025-12-03 07:47:14,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 08:47:19] 2025-12-03 07:47:14,787 | INFO     | [monitor] control thread has ended
[2025-12-03 08:47:19] 2025-12-03 07:47:19,653 | INFO     | all workflow threads have been joined
[2025-12-03 08:47:19] 2025-12-03 07:47:19,654 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 08:47:19] 2025-12-03 07:47:19,654 | INFO     | traces error code: 0
[2025-12-03 08:47:19] 2025-12-03 07:47:19,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 08:47:19] 2025-12-03 07:47:19,715 [wrapper] ==== pilot stdout END ====
[2025-12-03 08:47:19] 2025-12-03 07:47:19,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 08:47:19] 2025-12-03 07:47:19,718 [wrapper] pilotpid: 21966
[2025-12-03 08:47:19] 2025-12-03 07:47:19,719 [wrapper] Pilot exit status: 0
[2025-12-03 08:47:19] 2025-12-03 07:47:19,724 [wrapper] pandaids: 6895475294
[2025-12-03 08:47:19] 2025-12-03 07:47:19,761 [wrapper] cleanup supervisor_pilot 28482 21967
[2025-12-03 08:47:19] 2025-12-03 07:47:19,763 [wrapper] Test setup, not cleaning
[2025-12-03 08:47:19] 2025-12-03 07:47:19,764 [wrapper] apfmon messages muted
[2025-12-03 08:47:19] 2025-12-03 07:47:19,766 [wrapper] ==== wrapper stdout END ====
[2025-12-03 08:47:19] 2025-12-03 07:47:19,767 [wrapper] ==== wrapper stderr END ====
[2025-12-03 08:47:19]  *** Error codes and diagnostics ***
[2025-12-03 08:47:19]     "exeErrorCode": 0,
[2025-12-03 08:47:19]     "exeErrorDiag": "",
[2025-12-03 08:47:19]     "pilotErrorCode": 0,
[2025-12-03 08:47:19]     "pilotErrorDiag": "",
[2025-12-03 08:47:19]  *** Listing of results directory ***
[2025-12-03 08:47:19] total 1318796
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user      5112 Nov 24 10:01 queuedata.json
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user    576529 Nov 24 10:01 pilot3.tar.gz
[2025-12-03 08:47:19] -rwx------ 1 mf493845 unix-user     36292 Nov 24 10:02 runpilot2-wrapper.sh
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user       100 Dec  3 02:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 08:47:19] -rwxr-xr-x 1 mf493845 unix-user      7986 Dec  3 02:07 run_atlas
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user       105 Dec  3 02:07 job.xml
[2025-12-03 08:47:19] -rw-r--r-- 2 mf493845 unix-user     15847 Dec  3 03:52 start_atlas.sh
[2025-12-03 08:47:19] drwxrwx--x 2 mf493845 unix-user       100 Dec  3 03:52 shared
[2025-12-03 08:47:19] -rw-r--r-- 2 mf493845 unix-user    590108 Dec  3 03:52 input.tar.gz
[2025-12-03 08:47:19] -rw-r--r-- 2 mf493845 unix-user 411346600 Dec  3 03:52 EVNT.47483658._001287.pool.root.1
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user         0 Dec  3 03:52 boinc_setup_complete
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user      6391 Dec  3 03:52 init_data.xml
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user      8192 Dec  3 03:52 boinc_mmap_file
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user         0 Dec  3 03:52 boinc_lockfile
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user      2786 Dec  3 03:52 pandaJob.out
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user    989292 Dec  3 03:52 agis_schedconf.cvmfs.json
[2025-12-03 08:47:19] drwx------ 5 mf493845 unix-user       440 Dec  3 03:52 pilot3
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user        95 Dec  3 08:45 pilot_heartbeat.json
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user 927056864 Dec  3 08:45 HITS.47556149._002733.pool.root.1
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user      1029 Dec  3 08:46 memory_monitor_summary.json
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user   1516240 Dec  3 08:46 agis_ddmendpoints.agis.ALL.json
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user   1581940 Dec  3 08:46 log.47556149._002733.job.log.tgz.1
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user      8591 Dec  3 08:46 heartbeat.json
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user      4638 Dec  3 08:47 pilotlog.txt
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user   2495743 Dec  3 08:47 log.47556149._002733.job.log.1
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user       353 Dec  3 08:47 output.list
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user       620 Dec  3 08:47 runtime_log
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user   4096000 Dec  3 08:47 result.tar.gz
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user      9221 Dec  3 08:47 runtime_log.err
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user       651 Dec  3 08:47 gxCMDmldhh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJZLKDmXq2JGo.diag
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user     21697 Dec  3 08:47 stderr.txt
[2025-12-03 08:47:19] HITS file was successfully produced:
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user 927056864 Dec  3 08:45 shared/HITS.pool.root.1
[2025-12-03 08:47:19]  *** Contents of shared directory: ***
[2025-12-03 08:47:19] total 1311636
[2025-12-03 08:47:19] -rw-r--r-- 2 mf493845 unix-user     15847 Dec  3 03:52 start_atlas.sh
[2025-12-03 08:47:19] -rw-r--r-- 2 mf493845 unix-user    590108 Dec  3 03:52 input.tar.gz
[2025-12-03 08:47:19] -rw-r--r-- 2 mf493845 unix-user 411346600 Dec  3 03:52 ATLAS.root_0
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user 927056864 Dec  3 08:45 HITS.pool.root.1
[2025-12-03 08:47:19] -rw------- 1 mf493845 unix-user   4096000 Dec  3 08:47 result.tar.gz
08:47:21 (17056): run_atlas exited; CPU time 131265.346575
08:47:21 (17056): called boinc_finish(0)

</stderr_txt>
]]>

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