Name lPQMDmkKWj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmt7OKDmYwv1Mm_3
Workunit 237783875
Created 2 Dec 2025, 11:53:39 UTC
Sent 2 Dec 2025, 22:24:58 UTC
Report deadline 10 Dec 2025, 22:24:58 UTC
Received 3 Dec 2025, 2:25:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10987639
Run time 1 hours 23 min 25 sec
CPU time 10 hours 4 min 8 sec
Validate state Valid
Credit 92.69
Device peak FLOPS 8.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.91 GB
Peak swap size 3.07 GB
Peak disk usage 868.01 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:01:26 (2118): wrapper (7.7.26015): starting
02:01:26 (2118): wrapper: running run_atlas (--nthreads 8)
[2025-12-03 02:01:26] Arguments: --nthreads 8
[2025-12-03 02:01:26] Threads: 8
[2025-12-03 02:01:26] Checking for CVMFS
[2025-12-03 02:01:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 02:01:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 02:01:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 02:01:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 02:01:28] 2.11.0.0 8643 74946 111148 153575 1 110 3348030 4096001 2829 130560 0 10768050 99.697 5406780 541 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-12-03 02:01:28] CVMFS is ok
[2025-12-03 02:01:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 02:01:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 02:01:28] Further information can be found at the LHC@home message board.
[2025-12-03 02:01:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 02:01:28] Checking for apptainer binary...
[2025-12-03 02:01:28] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-12-03 02:01:28] apptainer is not installed, using version from CVMFS
[2025-12-03 02:01:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 02:01:28] WARNING: Environment variable TMPDIR already has value [/tmp/job_10946380/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node013
[2025-12-03 02:01:28] apptainer works
[2025-12-03 02:01:28] Set ATHENA_PROC_NUMBER=8
[2025-12-03 02:01:28] Set ATHENA_CORE_NUMBER=8
[2025-12-03 02:01:28] Starting ATLAS job with PandaID=6904565247
[2025-12-03 02:01:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10946380/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 03:24:47]  *** The last 200 lines of the pilot log: ***
[2025-12-03 03:24:47]  storage_token=
[2025-12-03 03:24:47]  surl=/tmp/job_10946380/atlas/pilot/slots/0/PanDA_Pilot-6904565247/log.47523845._000135.job.log.tgz.1
[2025-12-03 03:24:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/da/log.47523845._000135.job.log.tgz.1
[2025-12-03 03:24:47]  workdir=None
[2025-12-03 03:24:47] ]
[2025-12-03 03:24:47] 2025-12-03 02:23:35,261 | INFO     | transferring file log.47523845._000135.job.log.tgz.1 from /tmp/job_10946380/atlas/pilot/slots/0/PanDA_Pilot-6904565247/log.47523845._000135.job.log.tgz.1 to /tmp/j
[2025-12-03 03:24:47] 2025-12-03 02:23:35,261 | INFO     | executing command: /usr/bin/env mv /tmp/job_10946380/atlas/pilot/slots/0/PanDA_Pilot-6904565247/log.47523845._000135.job.log.tgz.1 /tmp/job_10946380/atlas/pilot/sl
[2025-12-03 03:24:47] 2025-12-03 02:23:35,270 | INFO     | adding to output.list: log.47523845._000135.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/da/log.47523845._000135.job.log.tg
[2025-12-03 03:24:47] 2025-12-03 02:23:35,270 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-03 03:24:47] 2025-12-03 02:23:35,270 | INFO     | summary of transferred files:
[2025-12-03 03:24:47] 2025-12-03 02:23:35,270 | INFO     |  -- lfn=log.47523845._000135.job.log.tgz.1, status_code=0, status=transferred
[2025-12-03 03:24:47] 2025-12-03 02:23:35,270 | INFO     | stage-out finished correctly
[2025-12-03 03:24:47] 2025-12-03 02:23:35,271 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 03:24:47] 2025-12-03 02:23:35,423 | WARNING  | process 13033 can no longer be monitored (due to stat problems) - aborting
[2025-12-03 03:24:47] 2025-12-03 02:23:35,423 | INFO     | using path: /tmp/job_10946380/atlas/pilot/slots/0/PanDA_Pilot-6904565247/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 03:24:47] 2025-12-03 02:23:35,483 | INFO     | time since job start (4922s) is within the limit (172800.0s)
[2025-12-03 03:24:47] 2025-12-03 02:23:35,523 | INFO     | number of running child processes to parent process 13033: 1
[2025-12-03 03:24:47] 2025-12-03 02:23:35,523 | INFO     | maximum number of monitored processes: 6
[2025-12-03 03:24:47] 2025-12-03 02:23:37,489 | INFO     | time since job start (4924s) is within the limit (172800.0s)
[2025-12-03 03:24:47] 2025-12-03 02:23:37,687 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-03 03:24:47] 2025-12-03 02:23:38,026 | INFO     | monitor loop #368: job 0:6904565247 is in state 'finished'
[2025-12-03 03:24:47] 2025-12-03 02:23:38,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 03:24:47] 2025-12-03 02:23:38,987 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 03:24:47] 2025-12-03 02:23:38,987 | INFO     | job 6904565247 has state=finished
[2025-12-03 03:24:47] 2025-12-03 02:23:38,987 | INFO     | preparing for final server update for job 6904565247 in state='finished'
[2025-12-03 03:24:47] 2025-12-03 02:23:38,987 | INFO     | this job has now completed (state=finished)
[2025-12-03 03:24:47] 2025-12-03 02:23:38,987 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-03 03:24:47] 2025-12-03 02:23:38,987 | INFO     | log transfer has been attempted: DONE
[2025-12-03 03:24:47] 2025-12-03 02:23:38,987 | INFO     | job 6904565247 has finished - writing final server update
[2025-12-03 03:24:47] 2025-12-03 02:23:38,987 | INFO     | total number of processed events: 400 (read)
[2025-12-03 03:24:47] 2025-12-03 02:23:38,987 | INFO     | executing command: lscpu
[2025-12-03 03:24:47] 2025-12-03 02:23:39,018 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-03 03:24:47] 2025-12-03 02:23:39,494 | INFO     | time since job start (4926s) is within the limit (172800.0s)
[2025-12-03 03:24:47] 2025-12-03 02:23:40,528 | INFO     | monitor loop #369: job 0:6904565247 is in state 'finished'
[2025-12-03 03:24:47] 2025-12-03 02:23:40,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 03:24:47] 2025-12-03 02:23:40,845 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 03:24:47] 2025-12-03 02:23:40,861 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2599.506015625
[2025-12-03 03:24:47] 2025-12-03 02:23:40,866 | INFO     | using path: /tmp/job_10946380/atlas/pilot/slots/0/PanDA_Pilot-6904565247/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 03:24:47] 2025-12-03 02:23:40,866 | INFO     | extracted standard info from prmon json
[2025-12-03 03:24:47] 2025-12-03 02:23:40,867 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 03:24:47] 2025-12-03 02:23:40,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 03:24:47] 2025-12-03 02:23:40,867 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-03 03:24:47] 2025-12-03 02:23:40,867 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-03 03:24:47] 2025-12-03 02:23:40,868 | INFO     | fitting pss+swap vs Time
[2025-12-03 03:24:47] 2025-12-03 02:23:40,868 | INFO     | sum of square deviations: 125630262.5
[2025-12-03 03:24:47] 2025-12-03 02:23:40,868 | INFO     | sum of deviations: -5664217860.5
[2025-12-03 03:24:47] 2025-12-03 02:23:40,868 | INFO     | mean x: 1764726242.5
[2025-12-03 03:24:47] 2025-12-03 02:23:40,868 | INFO     | mean y: 2664030.2837837837
[2025-12-03 03:24:47] 2025-12-03 02:23:40,868 | INFO     | intersect: 79567839671.47575
[2025-12-03 03:24:47] 2025-12-03 02:23:40,868 | INFO     | chi2: 0.10938086274114817
[2025-12-03 03:24:47] 2025-12-03 02:23:40,868 | INFO     | current memory leak: -45.09 B/s (using 74 data points, chi2=0.11)
[2025-12-03 03:24:47] 2025-12-03 02:23:40,869 | INFO     | could have reported an average CPU frequency of 2730 MHz (6 samples)
[2025-12-03 03:24:47] 2025-12-03 02:23:40,869 | INFO     | ..............................
[2025-12-03 03:24:47] 2025-12-03 02:23:40,869 | INFO     | . Timing measurements:
[2025-12-03 03:24:47] 2025-12-03 02:23:40,869 | INFO     | . get job = 0 s
[2025-12-03 03:24:47] 2025-12-03 02:23:40,869 | INFO     | . initial setup = 1 s
[2025-12-03 03:24:47] 2025-12-03 02:23:40,869 | INFO     | . payload setup = 2 s
[2025-12-03 03:24:47] 2025-12-03 02:23:40,869 | INFO     | . stage-in = 0 s
[2025-12-03 03:24:47] 2025-12-03 02:23:40,869 | INFO     | . payload execution = 4902 s
[2025-12-03 03:24:47] 2025-12-03 02:23:40,869 | INFO     | . stage-out = 0 s
[2025-12-03 03:24:47] 2025-12-03 02:23:40,869 | INFO     | . log creation = 0 s
[2025-12-03 03:24:47] 2025-12-03 02:23:40,869 | INFO     | ..............................
[2025-12-03 03:24:47] 2025-12-03 02:23:40,918 | INFO     | 
[2025-12-03 03:24:47] 2025-12-03 02:23:40,918 | INFO     | job summary report
[2025-12-03 03:24:47] 2025-12-03 02:23:40,918 | INFO     | --------------------------------------------------
[2025-12-03 03:24:47] 2025-12-03 02:23:40,918 | INFO     | PanDA job id: 6904565247
[2025-12-03 03:24:47] 2025-12-03 02:23:40,918 | INFO     | task id: 47523845
[2025-12-03 03:24:47] 2025-12-03 02:23:40,918 | INFO     | errors: (none)
[2025-12-03 03:24:47] 2025-12-03 02:23:40,918 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | pilot state: finished 
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | transexitcode: 0
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | exeerrorcode: 0
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | exeerrordiag: 
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | exitcode: 0
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | exitmsg: OK
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | cpuconsumptiontime: 36157 s
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | nevents: 400
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | neventsw: 0
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | pid: 13033
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | pgrp: 13033
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | corecount: 8
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | event service: False
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | sizes: {0: 2284027, 2: 2284289, 11: 2284317, 4908: 2310734, 4909: 2319762, 4911: 2319818, 4915: 2320140}
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | --------------------------------------------------
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | 
[2025-12-03 03:24:47] 2025-12-03 02:23:40,919 | INFO     | executing command: ls -lF /tmp/job_10946380/atlas/pilot/slots/0
[2025-12-03 03:24:47] 2025-12-03 02:23:40,929 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,929 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,929 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,929 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,929 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,929 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,930 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,930 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 03:24:47] 2025-12-03 02:23:40,930 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,930 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 03:24:47] 2025-12-03 02:23:40,930 | INFO     | job 6904565247 has completed (purged errors)
[2025-12-03 03:24:47] 2025-12-03 02:23:40,930 | INFO     | overall cleanup function is called
[2025-12-03 03:24:47] 2025-12-03 02:23:41,936 | INFO     | --- collectZombieJob: --- 10, [13033]
[2025-12-03 03:24:47] 2025-12-03 02:23:41,936 | INFO     | zombie collector waiting for pid 13033
[2025-12-03 03:24:47] 2025-12-03 02:23:41,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 03:24:47] 2025-12-03 02:23:41,936 | INFO     | collected zombie processes
[2025-12-03 03:24:47] 2025-12-03 02:23:41,936 | INFO     | will attempt to kill all subprocesses of pid=13033
[2025-12-03 03:24:47] 2025-12-03 02:23:42,041 | INFO     | process IDs to be killed: [13033] (in reverse order)
[2025-12-03 03:24:47] 2025-12-03 02:23:42,079 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 03:24:47] 2025-12-03 02:23:42,080 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 03:24:47] 2025-12-03 02:23:42,083 | INFO     | did not find any defunct processes belonging to 13033
[2025-12-03 03:24:47] 2025-12-03 02:23:42,086 | INFO     | did not find any defunct processes belonging to 13033
[2025-12-03 03:24:47] 2025-12-03 02:23:42,087 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 03:24:47] 2025-12-03 02:23:42,087 | INFO     | ready for new job
[2025-12-03 03:24:47] 2025-12-03 02:23:42,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 03:24:47] 2025-12-03 02:23:42,088 | INFO     | ***************************************
[2025-12-03 03:24:47] 2025-12-03 02:23:42,088 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 03:24:47] 2025-12-03 02:23:42,088 | INFO     | ***************************************
[2025-12-03 03:24:47] 2025-12-03 02:23:42,088 | INFO     | 
[2025-12-03 03:24:47] 2025-12-03 02:23:42,102 | INFO     | architecture information:
[2025-12-03 03:24:47] 2025-12-03 02:23:42,102 | INFO     | executing command: cat /etc/os-release
[2025-12-03 03:24:47] 2025-12-03 02:23:42,108 | INFO     | cat /etc/os-release:
[2025-12-03 03:24:47] NAME="CentOS Linux"
[2025-12-03 03:24:47] VERSION="7 (Core)"
[2025-12-03 03:24:47] ID="centos"
[2025-12-03 03:24:47] ID_LIKE="rhel fedora"
[2025-12-03 03:24:47] VERSION_ID="7"
[2025-12-03 03:24:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 03:24:47] ANSI_COLOR="0;31"
[2025-12-03 03:24:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 03:24:47] HOME_URL="https://www.centos.org/"
[2025-12-03 03:24:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 03:24:47] 
[2025-12-03 03:24:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 03:24:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 03:24:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 03:24:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 03:24:47] 
[2025-12-03 03:24:47] 2025-12-03 02:23:42,108 | INFO     | ***************************************
[2025-12-03 03:24:47] 2025-12-03 02:23:42,611 | INFO     | executing command: df -mP /tmp/job_10946380/atlas/pilot/slots/0
[2025-12-03 03:24:47] 2025-12-03 02:23:42,618 | INFO     | sufficient remaining disk space (224293552128 B)
[2025-12-03 03:24:47] 2025-12-03 02:23:42,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 03:24:47] 2025-12-03 02:23:42,618 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 03:24:47] 2025-12-03 02:23:42,618 | INFO     | update_server=False
[2025-12-03 03:24:47] 2025-12-03 02:23:42,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 03:24:47] 2025-12-03 02:23:42,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 03:24:47] 2025-12-03 02:23:42,723 | INFO     | all job control threads have been joined
[2025-12-03 03:24:47] 2025-12-03 02:23:43,031 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-03 03:24:47] 2025-12-03 02:23:43,031 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-03 03:24:47] 2025-12-03 02:23:43,031 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 03:24:47] 2025-12-03 02:23:43,031 | INFO     | will abort loop
[2025-12-03 03:24:47] 2025-12-03 02:23:43,177 | INFO     | all payload control threads have been joined
[2025-12-03 03:24:47] 2025-12-03 02:23:43,332 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 03:24:47] 2025-12-03 02:23:43,522 | INFO     | all data control threads have been joined
[2025-12-03 03:24:47] 2025-12-03 02:23:43,623 | INFO     | [job] retrieve thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:43,623 | INFO     | [job] queue monitor thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:43,677 | INFO     | [job] validate thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:43,728 | INFO     | [job] control thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:43,739 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 03:24:47] 2025-12-03 02:23:43,739 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:43,811 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:43,845 | INFO     | [payload] validate_post thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:43,891 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:44,036 | INFO     | [job] job monitor thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:44,055 | INFO     | [payload] failed_post thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:44,182 | INFO     | [payload] control thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:44,341 | INFO     | [data] copytool_in thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:44,527 | INFO     | [data] control thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:44,802 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:45,337 | INFO     | [data] copytool_out thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:23:47,744 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 03:24:47] 2025-12-03 02:24:12,696 | INFO     | PID=6013 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-03 03:24:47] 2025-12-03 02:24:12,696 | INFO     | .. there are 3 such processes running
[2025-12-03 03:24:47] 2025-12-03 02:24:12,696 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 03:24:47] 2025-12-03 02:24:12,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 03:24:47] 2025-12-03 02:24:12,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 03:24:47] 2025-12-03 02:24:41,136 | INFO     | [monitor] cgroup control has ended
[2025-12-03 03:24:47] 2025-12-03 02:24:42,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067122944)>']
[2025-12-03 03:24:47] 2025-12-03 02:24:42,847 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 03:24:47] 2025-12-03 02:24:42,847 | INFO     | [monitor] control thread has ended
[2025-12-03 03:24:47] 2025-12-03 02:24:47,749 | INFO     | all workflow threads have been joined
[2025-12-03 03:24:47] 2025-12-03 02:24:47,749 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 03:24:47] 2025-12-03 02:24:47,749 | INFO     | traces error code: 0
[2025-12-03 03:24:47] 2025-12-03 02:24:47,750 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 03:24:47] 2025-12-03 02:24:47,803 [wrapper] ==== pilot stdout END ====
[2025-12-03 03:24:47] 2025-12-03 02:24:47,804 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 03:24:47] 2025-12-03 02:24:47,805 [wrapper] pilotpid: 6013
[2025-12-03 03:24:47] 2025-12-03 02:24:47,807 [wrapper] Pilot exit status: 0
[2025-12-03 03:24:47] 2025-12-03 02:24:47,811 [wrapper] pandaids: 6904565247
[2025-12-03 03:24:47] 2025-12-03 02:24:47,833 [wrapper] cleanup supervisor_pilot 21200 6014
[2025-12-03 03:24:47] 2025-12-03 02:24:47,834 [wrapper] Test setup, not cleaning
[2025-12-03 03:24:47] 2025-12-03 02:24:47,835 [wrapper] apfmon messages muted
[2025-12-03 03:24:47] 2025-12-03 02:24:47,836 [wrapper] ==== wrapper stdout END ====
[2025-12-03 03:24:47] 2025-12-03 02:24:47,837 [wrapper] ==== wrapper stderr END ====
[2025-12-03 03:24:47]  *** Error codes and diagnostics ***
[2025-12-03 03:24:47]     "exeErrorCode": 0,
[2025-12-03 03:24:47]     "exeErrorDiag": "",
[2025-12-03 03:24:47]     "pilotErrorCode": 0,
[2025-12-03 03:24:47]     "pilotErrorDiag": "",
[2025-12-03 03:24:47]  *** Listing of results directory ***
[2025-12-03 03:24:47] total 598100
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user    576529 Nov 29 10:19 pilot3.tar.gz
[2025-12-03 03:24:47] -rwx------ 1 mf493845 unix-user     36292 Nov 29 10:22 runpilot2-wrapper.sh
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user      5112 Nov 29 10:25 queuedata.json
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user       100 Dec  3 00:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 03:24:47] -rwxr-xr-x 1 mf493845 unix-user      7986 Dec  3 00:43 run_atlas
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user       105 Dec  3 00:43 job.xml
[2025-12-03 03:24:47] -rw-r--r-- 2 mf493845 unix-user 306069958 Dec  3 02:01 EVNT.47523841._000001.pool.root.1
[2025-12-03 03:24:47] -rw-r--r-- 2 mf493845 unix-user     15847 Dec  3 02:01 start_atlas.sh
[2025-12-03 03:24:47] drwxrwx--x 2 mf493845 unix-user       100 Dec  3 02:01 shared
[2025-12-03 03:24:47] -rw-r--r-- 2 mf493845 unix-user    589960 Dec  3 02:01 input.tar.gz
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user      6391 Dec  3 02:01 init_data.xml
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user         0 Dec  3 02:01 boinc_setup_complete
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user      8192 Dec  3 02:01 boinc_mmap_file
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user         0 Dec  3 02:01 boinc_lockfile
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user      2617 Dec  3 02:01 pandaJob.out
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user    989284 Dec  3 02:01 agis_schedconf.cvmfs.json
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user   1516240 Dec  3 02:01 agis_ddmendpoints.agis.ALL.json
[2025-12-03 03:24:47] drwx------ 5 mf493845 unix-user       440 Dec  3 02:01 pilot3
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user 300350732 Dec  3 03:23 HITS.47523845._000135.pool.root.1
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user      1020 Dec  3 03:23 memory_monitor_summary.json
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user    327802 Dec  3 03:23 log.47523845._000135.job.log.tgz.1
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user        95 Dec  3 03:23 pilot_heartbeat.json
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user      7760 Dec  3 03:23 heartbeat.json
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user      5020 Dec  3 03:24 pilotlog.txt
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user    743460 Dec  3 03:24 log.47523845._000135.job.log.1
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user       357 Dec  3 03:24 output.list
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user       620 Dec  3 03:24 runtime_log
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user   1095680 Dec  3 03:24 result.tar.gz
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user      9220 Dec  3 03:24 runtime_log.err
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user       645 Dec  3 03:24 lPQMDmkKWj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmt7OKDmYwv1Mm.diag
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user     23033 Dec  3 03:24 stderr.txt
[2025-12-03 03:24:47] HITS file was successfully produced:
[2025-12-03 03:24:47] -rw------- 1 mf493845 unix-user 300350732 Dec  3 03:23 shared/HITS.pool.root.1
[2025-12-03 03:24:47]  *** Contents of shared directory: ***
[2025-12-03 03:24:48] total 593880
[2025-12-03 03:24:48] -rw-r--r-- 2 mf493845 unix-user 306069958 Dec  3 02:01 ATLAS.root_0
[2025-12-03 03:24:48] -rw-r--r-- 2 mf493845 unix-user     15847 Dec  3 02:01 start_atlas.sh
[2025-12-03 03:24:48] -rw-r--r-- 2 mf493845 unix-user    589960 Dec  3 02:01 input.tar.gz
[2025-12-03 03:24:48] -rw------- 1 mf493845 unix-user 300350732 Dec  3 03:23 HITS.pool.root.1
[2025-12-03 03:24:48] -rw------- 1 mf493845 unix-user   1095680 Dec  3 03:24 result.tar.gz
03:24:49 (2118): run_atlas exited; CPU time 36228.423136
03:24:49 (2118): called boinc_finish(0)

</stderr_txt>
]]>


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