Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:15:04 (3067376): wrapper (7.7.26015): starting
19:15:04 (3067376): wrapper: running run_atlas (--nthreads 9)
[2025-12-02 19:15:04] Arguments: --nthreads 9
[2025-12-02 19:15:04] Threads: 9
[2025-12-02 19:15:04] Checking for CVMFS
[2025-12-02 19:15:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 19:15:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 19:15:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 19:15:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 19:15:05] 2.13.3.0 4548 3079 91748 153575 3 69 7197691 37030912 1910 16776704 0 3638920 99.793 796059 47463 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 19:15:05] CVMFS is ok
[2025-12-02 19:15:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 19:15:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 19:15:05] Further information can be found at the LHC@home message board.
[2025-12-02 19:15:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 19:15:05] Checking for apptainer binary...
[2025-12-02 19:15:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 19:15:05] Running /usr/bin/apptainer --version
[2025-12-02 19:15:05] apptainer version 1.4.4-1.el9
[2025-12-02 19:15:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 19:15:05] c-205-36.aglt2.org
[2025-12-02 19:15:05] apptainer works
[2025-12-02 19:15:05] Set ATHENA_PROC_NUMBER=9
[2025-12-02 19:15:05] Set ATHENA_CORE_NUMBER=9
[2025-12-02 19:15:05] Starting ATLAS job with PandaID=6895352934
[2025-12-02 19:15:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 04:06:11]  *** The last 200 lines of the pilot log: ***
[2025-12-03 04:06:11] 2025-12-03 09:05:22,752 | INFO     | time since job start (31807s) is within the limit (172800.0s)
[2025-12-03 04:06:11] 2025-12-03 09:05:23,020 | INFO     | monitor loop #2362: job 0:6895352934 is in state 'finished'
[2025-12-03 04:06:11] 2025-12-03 09:05:23,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 04:06:11] 2025-12-03 09:05:24,345 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 04:06:11] 2025-12-03 09:05:24,351 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2693.8978437500004
[2025-12-03 04:06:11] 2025-12-03 09:05:24,358 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895352934/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 04:06:11] 2025-12-03 09:05:24,359 | INFO     | extracted standard info from prmon json
[2025-12-03 04:06:11] 2025-12-03 09:05:24,359 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 04:06:11] 2025-12-03 09:05:24,359 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 04:06:11] 2025-12-03 09:05:24,370 | INFO     | fitting pss+swap vs Time
[2025-12-03 04:06:11] 2025-12-03 09:05:24,370 | INFO     | sum of square deviations: 43851890823.877106
[2025-12-03 04:06:11] 2025-12-03 09:05:24,378 | INFO     | sum of deviations: 540987285569.6583
[2025-12-03 04:06:11] 2025-12-03 09:05:24,378 | INFO     | mean x: 1764736799.015355
[2025-12-03 04:06:11] 2025-12-03 09:05:24,378 | INFO     | mean y: 3103888.792706334
[2025-12-03 04:06:11] 2025-12-03 09:05:24,378 | INFO     | intersect: -21767911059.65225
[2025-12-03 04:06:11] 2025-12-03 09:05:24,379 | INFO     | chi2: 4.780663354039274
[2025-12-03 04:06:11] 2025-12-03 09:05:24,380 | INFO     | sum of square deviations: 42601432608.876015
[2025-12-03 04:06:11] 2025-12-03 09:05:24,387 | INFO     | sum of deviations: 706491959108.1472
[2025-12-03 04:06:11] 2025-12-03 09:05:24,387 | INFO     | mean x: 1764736646.515504
[2025-12-03 04:06:11] 2025-12-03 09:05:24,388 | INFO     | mean y: 3124060.8565891474
[2025-12-03 04:06:11] 2025-12-03 09:05:24,388 | INFO     | intersect: -29262845986.519585
[2025-12-03 04:06:11] 2025-12-03 09:05:24,389 | INFO     | chi2: 2.228415206210923
[2025-12-03 04:06:11] 2025-12-03 09:05:24,389 | INFO     | current chi2=2.228415206210923 (change=53.386903841951295 %)
[2025-12-03 04:06:11] 2025-12-03 09:05:24,389 | INFO     | sum of square deviations: 41374974843.87431
[2025-12-03 04:06:11] 2025-12-03 09:05:24,397 | INFO     | sum of deviations: 712099697553.63
[2025-12-03 04:06:11] 2025-12-03 09:05:24,397 | INFO     | mean x: 1764736494.0156555
[2025-12-03 04:06:11] 2025-12-03 09:05:24,397 | INFO     | mean y: 3124743.671232877
[2025-12-03 04:06:11] 2025-12-03 09:05:24,397 | INFO     | intersect: -30369542028.752316
[2025-12-03 04:06:11] 2025-12-03 09:05:24,398 | INFO     | chi2: 2.150405242633667
[2025-12-03 04:06:11] 2025-12-03 09:05:24,398 | INFO     | current chi2=2.150405242633667 (change=3.5006924813576332 %)
[2025-12-03 04:06:11] 2025-12-03 09:05:24,398 | INFO     | right removable region: 510
[2025-12-03 04:06:11] 2025-12-03 09:05:24,399 | INFO     | sum of square deviations: 42601427728.876015
[2025-12-03 04:06:11] 2025-12-03 09:05:24,406 | INFO     | sum of deviations: 394496158474.5308
[2025-12-03 04:06:11] 2025-12-03 09:05:24,406 | INFO     | mean x: 1764736951.515504
[2025-12-03 04:06:11] 2025-12-03 09:05:24,407 | INFO     | mean y: 3121710.746124031
[2025-12-03 04:06:11] 2025-12-03 09:05:24,407 | INFO     | intersect: -16338629850.29454
[2025-12-03 04:06:11] 2025-12-03 09:05:24,407 | INFO     | chi2: 2.7544734782397815
[2025-12-03 04:06:11] 2025-12-03 09:05:24,408 | INFO     | current chi2=2.7544734782397815 (change=42.383027746296456 %)
[2025-12-03 04:06:11] 2025-12-03 09:05:24,408 | INFO     | sum of square deviations: 41374965083.87431
[2025-12-03 04:06:11] 2025-12-03 09:05:24,416 | INFO     | sum of deviations: 362782524971.71045
[2025-12-03 04:06:11] 2025-12-03 09:05:24,416 | INFO     | mean x: 1764737104.0156555
[2025-12-03 04:06:11] 2025-12-03 09:05:24,416 | INFO     | mean y: 3125650.5362035227
[2025-12-03 04:06:11] 2025-12-03 09:05:24,416 | INFO     | intersect: -15470380640.24214
[2025-12-03 04:06:11] 2025-12-03 09:05:24,417 | INFO     | chi2: 2.721687364720456
[2025-12-03 04:06:11] 2025-12-03 09:05:24,417 | INFO     | current chi2=2.721687364720456 (change=1.1902860484348294 %)
[2025-12-03 04:06:11] 2025-12-03 09:05:24,417 | INFO     | left removable region: 20
[2025-12-03 04:06:11] 2025-12-03 09:05:24,418 | INFO     | sum of square deviations: 36480699348.40001
[2025-12-03 04:06:11] 2025-12-03 09:05:24,425 | INFO     | sum of deviations: 498031117291.3143
[2025-12-03 04:06:11] 2025-12-03 09:05:24,425 | INFO     | mean x: 1764737073.5142858
[2025-12-03 04:06:11] 2025-12-03 09:05:24,425 | INFO     | mean y: 3151485.5979591836
[2025-12-03 04:06:11] 2025-12-03 09:05:24,425 | INFO     | intersect: -24088875042.02043
[2025-12-03 04:06:11] 2025-12-03 09:05:24,426 | INFO     | chi2: 0.06390753916626583
[2025-12-03 04:06:11] 2025-12-03 09:05:24,426 | INFO     | current memory leak: 13.65 B/s (using 490 data points, chi2=0.06)
[2025-12-03 04:06:11] 2025-12-03 09:05:24,427 | INFO     | could have reported an average CPU frequency of 2612 MHz (21 samples)
[2025-12-03 04:06:11] 2025-12-03 09:05:24,427 | INFO     | ..............................
[2025-12-03 04:06:11] 2025-12-03 09:05:24,427 | INFO     | . Timing measurements:
[2025-12-03 04:06:11] 2025-12-03 09:05:24,427 | INFO     | . get job = 0 s
[2025-12-03 04:06:11] 2025-12-03 09:05:24,427 | INFO     | . initial setup = 2 s
[2025-12-03 04:06:11] 2025-12-03 09:05:24,427 | INFO     | . payload setup = 5 s
[2025-12-03 04:06:11] 2025-12-03 09:05:24,428 | INFO     | . stage-in = 0 s
[2025-12-03 04:06:11] 2025-12-03 09:05:24,428 | INFO     | . payload execution = 31778 s
[2025-12-03 04:06:11] 2025-12-03 09:05:24,428 | INFO     | . stage-out = 3 s
[2025-12-03 04:06:11] 2025-12-03 09:05:24,428 | INFO     | . log creation = 0 s
[2025-12-03 04:06:11] 2025-12-03 09:05:24,428 | INFO     | ..............................
[2025-12-03 04:06:11] 2025-12-03 09:05:24,544 | INFO     | 
[2025-12-03 04:06:11] 2025-12-03 09:05:24,544 | INFO     | job summary report
[2025-12-03 04:06:11] 2025-12-03 09:05:24,544 | INFO     | --------------------------------------------------
[2025-12-03 04:06:11] 2025-12-03 09:05:24,544 | INFO     | PanDA job id: 6895352934
[2025-12-03 04:06:11] 2025-12-03 09:05:24,544 | INFO     | task id: 47556149
[2025-12-03 04:06:11] 2025-12-03 09:05:24,544 | INFO     | errors: (none)
[2025-12-03 04:06:11] 2025-12-03 09:05:24,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 04:06:11] 2025-12-03 09:05:24,545 | INFO     | pilot state: finished 
[2025-12-03 04:06:11] 2025-12-03 09:05:24,545 | INFO     | transexitcode: 0
[2025-12-03 04:06:11] 2025-12-03 09:05:24,545 | INFO     | exeerrorcode: 0
[2025-12-03 04:06:11] 2025-12-03 09:05:24,545 | INFO     | exeerrordiag: 
[2025-12-03 04:06:11] 2025-12-03 09:05:24,545 | INFO     | exitcode: 0
[2025-12-03 04:06:11] 2025-12-03 09:05:24,545 | INFO     | exitmsg: OK
[2025-12-03 04:06:11] 2025-12-03 09:05:24,545 | INFO     | cpuconsumptiontime: 280866 s
[2025-12-03 04:06:11] 2025-12-03 09:05:24,545 | INFO     | nevents: 1000
[2025-12-03 04:06:11] 2025-12-03 09:05:24,545 | INFO     | neventsw: 0
[2025-12-03 04:06:11] 2025-12-03 09:05:24,546 | INFO     | pid: 3077517
[2025-12-03 04:06:11] 2025-12-03 09:05:24,546 | INFO     | pgrp: 3077517
[2025-12-03 04:06:11] 2025-12-03 09:05:24,546 | INFO     | corecount: 9
[2025-12-03 04:06:11] 2025-12-03 09:05:24,546 | INFO     | event service: False
[2025-12-03 04:06:11] 2025-12-03 09:05:24,546 | INFO     | sizes: {0: 2284213, 4: 2284475, 11: 2284503, 31787: 2324033, 31790: 2333027, 31791: 2333083, 31794: 2333457}
[2025-12-03 04:06:11] 2025-12-03 09:05:24,546 | INFO     | --------------------------------------------------
[2025-12-03 04:06:11] 2025-12-03 09:05:24,546 | INFO     | 
[2025-12-03 04:06:11] 2025-12-03 09:05:24,546 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-03 04:06:11] 2025-12-03 09:05:24,562 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,562 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,563 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,563 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,563 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,564 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,564 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,564 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,564 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,564 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,564 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,564 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,564 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 04:06:11] 2025-12-03 09:05:24,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,565 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 04:06:11] 2025-12-03 09:05:24,565 | INFO     | job 6895352934 has completed (purged errors)
[2025-12-03 04:06:11] 2025-12-03 09:05:24,565 | INFO     | overall cleanup function is called
[2025-12-03 04:06:11] 2025-12-03 09:05:25,582 | INFO     | --- collectZombieJob: --- 10, [3077517]
[2025-12-03 04:06:11] 2025-12-03 09:05:25,582 | INFO     | zombie collector waiting for pid 3077517
[2025-12-03 04:06:11] 2025-12-03 09:05:25,582 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 04:06:11] 2025-12-03 09:05:25,582 | INFO     | collected zombie processes
[2025-12-03 04:06:11] 2025-12-03 09:05:25,582 | INFO     | will attempt to kill all subprocesses of pid=3077517
[2025-12-03 04:06:11] 2025-12-03 09:05:25,775 | INFO     | process IDs to be killed: [3077517] (in reverse order)
[2025-12-03 04:06:11] 2025-12-03 09:05:25,829 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 04:06:11] 2025-12-03 09:05:25,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 04:06:11] 2025-12-03 09:05:25,835 | INFO     | did not find any defunct processes belonging to 3077517
[2025-12-03 04:06:11] 2025-12-03 09:05:25,841 | INFO     | did not find any defunct processes belonging to 3077517
[2025-12-03 04:06:11] 2025-12-03 09:05:25,842 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 04:06:11] 2025-12-03 09:05:25,842 | INFO     | ready for new job
[2025-12-03 04:06:11] 2025-12-03 09:05:25,843 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 04:06:11] 2025-12-03 09:05:25,845 | INFO     | ***************************************
[2025-12-03 04:06:11] 2025-12-03 09:05:25,846 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 04:06:11] 2025-12-03 09:05:25,846 | INFO     | ***************************************
[2025-12-03 04:06:11] 2025-12-03 09:05:25,846 | INFO     | 
[2025-12-03 04:06:11] 2025-12-03 09:05:25,848 | INFO     | architecture information:
[2025-12-03 04:06:11] 2025-12-03 09:05:25,848 | INFO     | executing command: cat /etc/os-release
[2025-12-03 04:06:11] 2025-12-03 09:05:25,861 | INFO     | cat /etc/os-release:
[2025-12-03 04:06:11] NAME="CentOS Linux"
[2025-12-03 04:06:11] VERSION="7 (Core)"
[2025-12-03 04:06:11] ID="centos"
[2025-12-03 04:06:11] ID_LIKE="rhel fedora"
[2025-12-03 04:06:11] VERSION_ID="7"
[2025-12-03 04:06:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 04:06:11] ANSI_COLOR="0;31"
[2025-12-03 04:06:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 04:06:11] HOME_URL="https://www.centos.org/"
[2025-12-03 04:06:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 04:06:11] 
[2025-12-03 04:06:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 04:06:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 04:06:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 04:06:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 04:06:11] 
[2025-12-03 04:06:11] 2025-12-03 09:05:25,861 | INFO     | ***************************************
[2025-12-03 04:06:11] 2025-12-03 09:05:26,364 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-03 04:06:11] 2025-12-03 09:05:26,378 | INFO     | sufficient remaining disk space (38707134464 B)
[2025-12-03 04:06:11] 2025-12-03 09:05:26,378 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 04:06:11] 2025-12-03 09:05:26,379 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 04:06:11] 2025-12-03 09:05:26,379 | INFO     | update_server=False
[2025-12-03 04:06:11] 2025-12-03 09:05:26,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 04:06:11] 2025-12-03 09:05:26,379 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 04:06:11] 2025-12-03 09:05:26,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 04:06:11] 2025-12-03 09:05:26,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 04:06:11] 2025-12-03 09:05:26,528 | INFO     | aborting loop
[2025-12-03 04:06:11] 2025-12-03 09:05:26,530 | INFO     | all payload control threads have been joined
[2025-12-03 04:06:11] 2025-12-03 09:05:26,735 | INFO     | all data control threads have been joined
[2025-12-03 04:06:11] 2025-12-03 09:05:26,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 04:06:11] 2025-12-03 09:05:27,385 | INFO     | [job] retrieve thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:27,385 | INFO     | [job] queue monitor thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:27,503 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:27,520 | INFO     | all job control threads have been joined
[2025-12-03 04:06:11] 2025-12-03 09:05:27,532 | INFO     | [payload] control thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:27,533 | INFO     | [job] job monitor thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:27,697 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:27,741 | INFO     | [data] control thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:27,790 | INFO     | [payload] validate_post thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:28,207 | INFO     | [payload] failed_post thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:28,382 | INFO     | [data] copytool_out thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:28,525 | INFO     | [job] control thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:28,567 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:28,589 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:28,733 | INFO     | [job] validate thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:28,795 | INFO     | [data] copytool_in thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:30,754 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 04:06:11] 2025-12-03 09:05:56,079 | INFO     | PID=3071070 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 04:06:11] 2025-12-03 09:05:56,079 | INFO     | .. there are 3 such processes running
[2025-12-03 04:06:11] 2025-12-03 09:05:56,080 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 04:06:11] 2025-12-03 09:05:56,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 04:06:11] 2025-12-03 09:05:56,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 04:06:11] 2025-12-03 09:06:05,748 | INFO     | [monitor] cgroup control has ended
[2025-12-03 04:06:11] 2025-12-03 09:06:06,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824582653760)>', '<ExcThread(monitor, started 139824220575488)>']
[2025-12-03 04:06:11] 2025-12-03 09:06:06,130 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 04:06:11] 2025-12-03 09:06:06,131 | INFO     | [monitor] control thread has ended
[2025-12-03 04:06:11] 2025-12-03 09:06:11,115 | INFO     | all workflow threads have been joined
[2025-12-03 04:06:11] 2025-12-03 09:06:11,115 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 04:06:11] 2025-12-03 09:06:11,115 | INFO     | traces error code: 0
[2025-12-03 04:06:11] 2025-12-03 09:06:11,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 04:06:11] 2025-12-03 09:06:11,239 [wrapper] ==== pilot stdout END ====
[2025-12-03 04:06:11] 2025-12-03 09:06:11,241 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 04:06:11] 2025-12-03 09:06:11,244 [wrapper] pilotpid: 3071070
[2025-12-03 04:06:11] 2025-12-03 09:06:11,246 [wrapper] Pilot exit status: 0
[2025-12-03 04:06:11] 2025-12-03 09:06:11,255 [wrapper] pandaids: 6895352934
[2025-12-03 04:06:11] 2025-12-03 09:06:11,294 [wrapper] cleanup supervisor_pilot 3565110 3071071
[2025-12-03 04:06:11] 2025-12-03 09:06:11,296 [wrapper] Test setup, not cleaning
[2025-12-03 04:06:11] 2025-12-03 09:06:11,299 [wrapper] apfmon messages muted
[2025-12-03 04:06:11] 2025-12-03 09:06:11,301 [wrapper] ==== wrapper stdout END ====
[2025-12-03 04:06:11] 2025-12-03 09:06:11,304 [wrapper] ==== wrapper stderr END ====
[2025-12-03 04:06:11]  *** Error codes and diagnostics ***
[2025-12-03 04:06:11]     "exeErrorCode": 0,
[2025-12-03 04:06:11]     "exeErrorDiag": "",
[2025-12-03 04:06:11]     "pilotErrorCode": 0,
[2025-12-03 04:06:11]     "pilotErrorDiag": "",
[2025-12-03 04:06:11]  *** Listing of results directory ***
[2025-12-03 04:06:11] total 1317392
[2025-12-03 04:06:11] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 22:47 pilot3.tar.gz
[2025-12-03 04:06:11] -rwx------. 1 boincer umatlas     36292 Nov 22 23:30 runpilot2-wrapper.sh
[2025-12-03 04:06:11] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 23:30 queuedata.json
[2025-12-03 04:06:11] -rw-r--r--. 1 boincer umatlas       100 Dec  2 19:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 04:06:11] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 19:15 run_atlas
[2025-12-03 04:06:11] -rw-r--r--. 1 boincer umatlas       105 Dec  2 19:15 job.xml
[2025-12-03 04:06:11] -rw-r--r--. 2 boincer umatlas 410016101 Dec  2 19:15 EVNT.47483658._001137.pool.root.1
[2025-12-03 04:06:11] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 19:15 start_atlas.sh
[2025-12-03 04:06:11] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 19:15 shared
[2025-12-03 04:06:11] -rw-r--r--. 2 boincer umatlas    590100 Dec  2 19:15 input.tar.gz
[2025-12-03 04:06:11] -rw-r--r--. 1 boincer umatlas         0 Dec  2 19:15 boinc_lockfile
[2025-12-03 04:06:11] -rw-r--r--. 1 boincer umatlas      2784 Dec  2 19:15 pandaJob.out
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas    989284 Dec  2 19:15 agis_schedconf.cvmfs.json
[2025-12-03 04:06:11] drwx------. 5 boincer umatlas      4096 Dec  2 19:15 pilot3
[2025-12-03 04:06:11] -rw-r--r--. 1 boincer umatlas       533 Dec  3 03:57 boinc_task_state.xml
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas 922196596 Dec  3 04:04 HITS.47556149._001237.pool.root.1
[2025-12-03 04:06:11] -rw-r--r--. 1 boincer umatlas      6527 Dec  3 04:05 init_data.xml
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas      1045 Dec  3 04:05 memory_monitor_summary.json
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas   1516240 Dec  3 04:05 agis_ddmendpoints.agis.ALL.json
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas   1907989 Dec  3 04:05 log.47556149._001237.job.log.tgz.1
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas      8619 Dec  3 04:05 heartbeat.json
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas        95 Dec  3 04:05 pilot_heartbeat.json
[2025-12-03 04:06:11] -rw-r--r--. 1 boincer umatlas        29 Dec  3 04:06 wrapper_checkpoint.txt
[2025-12-03 04:06:11] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 04:06 boinc_mmap_file
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas      4823 Dec  3 04:06 pilotlog.txt
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas   4533950 Dec  3 04:06 log.47556149._001237.job.log.1
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas       353 Dec  3 04:06 output.list
[2025-12-03 04:06:11] -rw-r--r--. 1 boincer umatlas       620 Dec  3 04:06 runtime_log
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas   6461440 Dec  3 04:06 result.tar.gz
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas       659 Dec  3 04:06 ioPKDm5uGh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhbKKDmEsfMJn.diag
[2025-12-03 04:06:11] -rw-r--r--. 1 boincer umatlas      8818 Dec  3 04:06 runtime_log.err
[2025-12-03 04:06:11] -rw-r--r--. 1 boincer umatlas     21315 Dec  3 04:06 stderr.txt
[2025-12-03 04:06:11] HITS file was successfully produced:
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas 922196596 Dec  3 04:04 shared/HITS.pool.root.1
[2025-12-03 04:06:11]  *** Contents of shared directory: ***
[2025-12-03 04:06:11] total 1307908
[2025-12-03 04:06:11] -rw-r--r--. 2 boincer umatlas 410016101 Dec  2 19:15 ATLAS.root_0
[2025-12-03 04:06:11] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 19:15 start_atlas.sh
[2025-12-03 04:06:11] -rw-r--r--. 2 boincer umatlas    590100 Dec  2 19:15 input.tar.gz
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas 922196596 Dec  3 04:04 HITS.pool.root.1
[2025-12-03 04:06:11] -rw-------. 1 boincer umatlas   6461440 Dec  3 04:06 result.tar.gz
04:06:13 (3067376): run_atlas exited; CPU time 281159.321162
04:06:13 (3067376): called boinc_finish(0)

</stderr_txt>
]]>

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