Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:31:28 (1701831): wrapper (7.7.26015): starting
17:31:28 (1701831): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 17:31:28] Arguments: --nthreads 8
[2025-12-02 17:31:28] Threads: 8
[2025-12-02 17:31:28] Checking for CVMFS
[2025-12-02 17:31:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 17:31:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 17:31:28] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 17:31:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 17:31:30] 2.13.3.0 7100 39230 232604 153571 3 437 27264440 40960001 54371 16776704 0 528542506 99.700 377029124 47880 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 17:31:30] CVMFS is ok
[2025-12-02 17:31:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 17:31:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 17:31:30] Further information can be found at the LHC@home message board.
[2025-12-02 17:31:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 17:31:30] Checking for apptainer binary...
[2025-12-02 17:31:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 17:31:30] Running /usr/bin/apptainer --version
[2025-12-02 17:31:30] apptainer version 1.4.4-1.el9
[2025-12-02 17:31:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 17:31:30] c8-6-10.aglt2.org
[2025-12-02 17:31:30] apptainer works
[2025-12-02 17:31:30] Set ATHENA_PROC_NUMBER=8
[2025-12-02 17:31:30] Set ATHENA_CORE_NUMBER=8
[2025-12-02 17:31:30] Starting ATLAS job with PandaID=6895362396
[2025-12-02 17:31:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 00:27:07]  *** The last 200 lines of the pilot log: ***
[2025-12-03 00:27:07] 2025-12-03 05:26:20,083 | INFO     | monitor loop #1544: job 0:6895362396 is in state 'finished'
[2025-12-03 00:27:07] 2025-12-03 05:26:20,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:27:07] 2025-12-03 05:26:21,586 | INFO     | PID=1706635 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 00:27:07] 2025-12-03 05:26:21,586 | INFO     | .. there are 58 such processes running
[2025-12-03 00:27:07] 2025-12-03 05:26:22,587 | INFO     | time since job start (24855s) is within the limit (172800.0s)
[2025-12-03 00:27:07] 2025-12-03 05:26:22,590 | INFO     | monitor loop #1545: job 0:6895362396 is in state 'finished'
[2025-12-03 00:27:07] 2025-12-03 05:26:22,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:27:07] 2025-12-03 05:26:24,609 | INFO     | time since job start (24857s) is within the limit (172800.0s)
[2025-12-03 00:27:07] 2025-12-03 05:26:25,117 | INFO     | monitor loop #1546: job 0:6895362396 is in state 'finished'
[2025-12-03 00:27:07] 2025-12-03 05:26:25,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:27:07] 2025-12-03 05:26:26,618 | INFO     | time since job start (24859s) is within the limit (172800.0s)
[2025-12-03 00:27:07] 2025-12-03 05:26:27,630 | INFO     | monitor loop #1547: job 0:6895362396 is in state 'finished'
[2025-12-03 00:27:07] 2025-12-03 05:26:27,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:27:07] 2025-12-03 05:26:28,626 | INFO     | time since job start (24861s) is within the limit (172800.0s)
[2025-12-03 00:27:07] 2025-12-03 05:26:30,165 | INFO     | monitor loop #1548: job 0:6895362396 is in state 'finished'
[2025-12-03 00:27:07] 2025-12-03 05:26:30,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:27:07] 2025-12-03 05:26:30,635 | INFO     | time since job start (24863s) is within the limit (172800.0s)
[2025-12-03 00:27:07] 2025-12-03 05:26:32,319 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-03 00:27:07] 2025-12-03 05:26:32,326 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9914296875
[2025-12-03 00:27:07] 2025-12-03 05:26:32,351 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895362396/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 00:27:07] 2025-12-03 05:26:32,351 | INFO     | extracted standard info from prmon json
[2025-12-03 00:27:07] 2025-12-03 05:26:32,351 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 00:27:07] 2025-12-03 05:26:32,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 00:27:07] 2025-12-03 05:26:32,359 | INFO     | fitting pss+swap vs Time
[2025-12-03 00:27:07] 2025-12-03 05:26:32,363 | INFO     | sum of square deviations: 20750721799.559067
[2025-12-03 00:27:07] 2025-12-03 05:26:32,365 | INFO     | sum of deviations: -435002531958.1232
[2025-12-03 00:27:07] 2025-12-03 05:26:32,365 | INFO     | mean x: 1764727165.1157637
[2025-12-03 00:27:07] 2025-12-03 05:26:32,365 | INFO     | mean y: 2767270.300492611
[2025-12-03 00:27:07] 2025-12-03 05:26:32,365 | INFO     | intersect: 36997180884.23802
[2025-12-03 00:27:07] 2025-12-03 05:26:32,366 | INFO     | chi2: 22.167492825705747
[2025-12-03 00:27:07] 2025-12-03 05:26:32,366 | INFO     | sum of square deviations: 19993633248.842922
[2025-12-03 00:27:07] 2025-12-03 05:26:32,372 | INFO     | sum of deviations: -302686522517.75574
[2025-12-03 00:27:07] 2025-12-03 05:26:32,372 | INFO     | mean x: 1764727012.6359103
[2025-12-03 00:27:07] 2025-12-03 05:26:32,372 | INFO     | mean y: 2793908.344139651
[2025-12-03 00:27:07] 2025-12-03 05:26:32,372 | INFO     | intersect: 26719252893.047398
[2025-12-03 00:27:07] 2025-12-03 05:26:32,373 | INFO     | chi2: 18.351625935396555
[2025-12-03 00:27:07] 2025-12-03 05:26:32,373 | INFO     | current chi2=18.351625935396555 (change=17.213795535254473 %)
[2025-12-03 00:27:07] 2025-12-03 05:26:32,373 | INFO     | right removable region: 400
[2025-12-03 00:27:07] 2025-12-03 05:26:32,373 | INFO     | sum of square deviations: 19993257613.11219
[2025-12-03 00:27:07] 2025-12-03 05:26:32,379 | INFO     | sum of deviations: -542417098164.51624
[2025-12-03 00:27:07] 2025-12-03 05:26:32,379 | INFO     | mean x: 1764727317.6334164
[2025-12-03 00:27:07] 2025-12-03 05:26:32,379 | INFO     | mean y: 2788825.4862842895
[2025-12-03 00:27:07] 2025-12-03 05:26:32,379 | INFO     | intersect: 47879842640.5982
[2025-12-03 00:27:07] 2025-12-03 05:26:32,380 | INFO     | chi2: 19.918172370859537
[2025-12-03 00:27:07] 2025-12-03 05:26:32,380 | INFO     | current chi2=19.918172370859537 (change=10.146932143078738 %)
[2025-12-03 00:27:07] 2025-12-03 05:26:32,380 | INFO     | left removable region: 10
[2025-12-03 00:27:07] 2025-12-03 05:26:32,380 | INFO     | sum of square deviations: 18392588455.43578
[2025-12-03 00:27:07] 2025-12-03 05:26:32,382 | INFO     | sum of deviations: -394460681173.1026
[2025-12-03 00:27:07] 2025-12-03 05:26:32,382 | INFO     | mean x: 1764727287.1794872
[2025-12-03 00:27:07] 2025-12-03 05:26:32,382 | INFO     | mean y: 2823335.687179487
[2025-12-03 00:27:07] 2025-12-03 05:26:32,382 | INFO     | intersect: 37850434044.32839
[2025-12-03 00:27:07] 2025-12-03 05:26:32,382 | INFO     | chi2: 15.36848107058397
[2025-12-03 00:27:07] 2025-12-03 05:26:32,383 | INFO     | current memory leak: -21.45 B/s (using 390 data points, chi2=15.37)
[2025-12-03 00:27:07] 2025-12-03 05:26:32,387 | INFO     | could have reported an average CPU frequency of 3799 MHz (17 samples)
[2025-12-03 00:27:07] 2025-12-03 05:26:32,387 | INFO     | ..............................
[2025-12-03 00:27:07] 2025-12-03 05:26:32,387 | INFO     | . Timing measurements:
[2025-12-03 00:27:07] 2025-12-03 05:26:32,387 | INFO     | . get job = 0 s
[2025-12-03 00:27:07] 2025-12-03 05:26:32,387 | INFO     | . initial setup = 3 s
[2025-12-03 00:27:07] 2025-12-03 05:26:32,387 | INFO     | . payload setup = 25 s
[2025-12-03 00:27:07] 2025-12-03 05:26:32,387 | INFO     | . stage-in = 0 s
[2025-12-03 00:27:07] 2025-12-03 05:26:32,387 | INFO     | . payload execution = 24750 s
[2025-12-03 00:27:07] 2025-12-03 05:26:32,387 | INFO     | . stage-out = 9 s
[2025-12-03 00:27:07] 2025-12-03 05:26:32,388 | INFO     | . log creation = 2 s
[2025-12-03 00:27:07] 2025-12-03 05:26:32,388 | INFO     | ..............................
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | 
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | job summary report
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | --------------------------------------------------
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | PanDA job id: 6895362396
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | task id: 47556137
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | errors: (none)
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | pilot state: finished 
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | transexitcode: 0
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | exeerrorcode: 0
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | exeerrordiag: 
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | exitcode: 0
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | exitmsg: OK
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | cpuconsumptiontime: 132389 s
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | nevents: 1000
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | neventsw: 0
[2025-12-03 00:27:07] 2025-12-03 05:26:32,495 | INFO     | pid: 1717267
[2025-12-03 00:27:07] 2025-12-03 05:26:32,496 | INFO     | pgrp: 1717267
[2025-12-03 00:27:07] 2025-12-03 05:26:32,496 | INFO     | corecount: 8
[2025-12-03 00:27:07] 2025-12-03 05:26:32,496 | INFO     | event service: False
[2025-12-03 00:27:07] 2025-12-03 05:26:32,496 | INFO     | sizes: {0: 2284143, 1: 2284342, 12: 2284342, 18: 2284632, 22: 2284660, 24781: 2321602, 24791: 2330624, 24792: 2330680, 24826: 2330990}
[2025-12-03 00:27:07] 2025-12-03 05:26:32,496 | INFO     | --------------------------------------------------
[2025-12-03 00:27:07] 2025-12-03 05:26:32,496 | INFO     | 
[2025-12-03 00:27:07] 2025-12-03 05:26:32,496 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-12-03 00:27:07] 2025-12-03 05:26:32,579 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,579 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,580 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,580 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,580 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,580 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 00:27:07] 2025-12-03 05:26:32,585 | INFO     | job 6895362396 has completed (purged errors)
[2025-12-03 00:27:07] 2025-12-03 05:26:32,585 | INFO     | overall cleanup function is called
[2025-12-03 00:27:07] 2025-12-03 05:26:33,626 | INFO     | --- collectZombieJob: --- 10, [1717267]
[2025-12-03 00:27:07] 2025-12-03 05:26:33,626 | INFO     | zombie collector waiting for pid 1717267
[2025-12-03 00:27:07] 2025-12-03 05:26:33,626 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 00:27:07] 2025-12-03 05:26:33,626 | INFO     | collected zombie processes
[2025-12-03 00:27:07] 2025-12-03 05:26:33,626 | INFO     | will attempt to kill all subprocesses of pid=1717267
[2025-12-03 00:27:07] 2025-12-03 05:26:35,917 | INFO     | process IDs to be killed: [1717267] (in reverse order)
[2025-12-03 00:27:07] 2025-12-03 05:26:36,279 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 00:27:07] 2025-12-03 05:26:36,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 00:27:07] 2025-12-03 05:26:36,378 | INFO     | did not find any defunct processes belonging to 1717267
[2025-12-03 00:27:07] 2025-12-03 05:26:36,495 | INFO     | did not find any defunct processes belonging to 1717267
[2025-12-03 00:27:07] 2025-12-03 05:26:36,503 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 00:27:07] 2025-12-03 05:26:36,505 | INFO     | ready for new job
[2025-12-03 00:27:07] 2025-12-03 05:26:36,505 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 00:27:07] 2025-12-03 05:26:36,514 | INFO     | ***************************************
[2025-12-03 00:27:07] 2025-12-03 05:26:36,514 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 00:27:07] 2025-12-03 05:26:36,514 | INFO     | ***************************************
[2025-12-03 00:27:07] 2025-12-03 05:26:36,514 | INFO     | 
[2025-12-03 00:27:07] 2025-12-03 05:26:36,532 | INFO     | architecture information:
[2025-12-03 00:27:07] 2025-12-03 05:26:36,540 | INFO     | executing command: cat /etc/os-release
[2025-12-03 00:27:07] 2025-12-03 05:26:36,612 | INFO     | cat /etc/os-release:
[2025-12-03 00:27:07] NAME="CentOS Linux"
[2025-12-03 00:27:07] VERSION="7 (Core)"
[2025-12-03 00:27:07] ID="centos"
[2025-12-03 00:27:07] ID_LIKE="rhel fedora"
[2025-12-03 00:27:07] VERSION_ID="7"
[2025-12-03 00:27:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 00:27:07] ANSI_COLOR="0;31"
[2025-12-03 00:27:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 00:27:07] HOME_URL="https://www.centos.org/"
[2025-12-03 00:27:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 00:27:07] 
[2025-12-03 00:27:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 00:27:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 00:27:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 00:27:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 00:27:07] 
[2025-12-03 00:27:07] 2025-12-03 05:26:36,612 | INFO     | ***************************************
[2025-12-03 00:27:07] 2025-12-03 05:26:37,123 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-12-03 00:27:07] 2025-12-03 05:26:37,226 | INFO     | sufficient remaining disk space (159880577024 B)
[2025-12-03 00:27:07] 2025-12-03 05:26:37,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 00:27:07] 2025-12-03 05:26:37,227 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 00:27:07] 2025-12-03 05:26:37,227 | INFO     | update_server=False
[2025-12-03 00:27:07] 2025-12-03 05:26:37,227 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 00:27:07] 2025-12-03 05:26:37,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 00:27:07] 2025-12-03 05:26:37,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 00:27:07] 2025-12-03 05:26:37,233 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 00:27:07] 2025-12-03 05:26:37,233 | INFO     | aborting loop
[2025-12-03 00:27:07] 2025-12-03 05:26:37,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 00:27:07] 2025-12-03 05:26:37,989 | INFO     | all data control threads have been joined
[2025-12-03 00:27:07] 2025-12-03 05:26:38,107 | INFO     | all payload control threads have been joined
[2025-12-03 00:27:07] 2025-12-03 05:26:38,233 | INFO     | [job] retrieve thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:38,239 | INFO     | [job] job monitor thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:38,391 | INFO     | [payload] validate_post thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:38,493 | INFO     | [data] copytool_in thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:38,497 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:38,504 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:38,532 | INFO     | [job] queue monitor thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:38,651 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:38,923 | INFO     | all job control threads have been joined
[2025-12-03 00:27:07] 2025-12-03 05:26:38,996 | INFO     | [data] control thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:39,078 | INFO     | [payload] failed_post thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:39,113 | INFO     | [payload] control thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:39,236 | INFO     | [data] copytool_out thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:39,490 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:39,524 | INFO     | [job] validate thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:39,929 | INFO     | [job] control thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:41,242 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 00:27:07] 2025-12-03 05:26:49,654 | INFO     | [monitor] cgroup control has ended
[2025-12-03 00:27:07] 2025-12-03 05:26:51,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140315444406080)>', '<ExcThread(monitor, started 140314920589056)>']
[2025-12-03 00:27:07] 2025-12-03 05:26:56,042 | INFO     | all workflow threads have been joined
[2025-12-03 00:27:07] 2025-12-03 05:26:56,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 00:27:07] 2025-12-03 05:26:56,042 | INFO     | traces error code: 0
[2025-12-03 00:27:07] 2025-12-03 05:26:56,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 00:27:07] 2025-12-03 05:27:05,554 | INFO     | PID=1706635 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 00:27:07] 2025-12-03 05:27:05,555 | INFO     | .. there are 57 such processes running
[2025-12-03 00:27:07] 2025-12-03 05:27:05,559 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 00:27:07] 2025-12-03 05:27:05,559 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 00:27:07] 2025-12-03 05:27:05,559 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 00:27:07] 2025-12-03 05:27:05,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 00:27:07] 2025-12-03 05:27:05,559 | INFO     | [monitor] control thread has ended
[2025-12-03 00:27:07] 2025-12-03 05:27:05,933 [wrapper] ==== pilot stdout END ====
[2025-12-03 00:27:07] 2025-12-03 05:27:05,957 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 00:27:07] 2025-12-03 05:27:05,985 [wrapper] pilotpid: 1706635
[2025-12-03 00:27:07] 2025-12-03 05:27:06,013 [wrapper] Pilot exit status: 0
[2025-12-03 00:27:07] 2025-12-03 05:27:06,154 [wrapper] pandaids: 6895362396
[2025-12-03 00:27:07] 2025-12-03 05:27:06,824 [wrapper] cleanup supervisor_pilot  999585 1706636
[2025-12-03 00:27:07] 2025-12-03 05:27:06,877 [wrapper] Test setup, not cleaning
[2025-12-03 00:27:07] 2025-12-03 05:27:07,040 [wrapper] apfmon messages muted
[2025-12-03 00:27:07] 2025-12-03 05:27:07,075 [wrapper] ==== wrapper stdout END ====
[2025-12-03 00:27:07] 2025-12-03 05:27:07,141 [wrapper] ==== wrapper stderr END ====
[2025-12-03 00:27:07]  *** Error codes and diagnostics ***
[2025-12-03 00:27:07]     "exeErrorCode": 0,
[2025-12-03 00:27:07]     "exeErrorDiag": "",
[2025-12-03 00:27:07]     "pilotErrorCode": 0,
[2025-12-03 00:27:07]     "pilotErrorDiag": "",
[2025-12-03 00:27:07]  *** Listing of results directory ***
[2025-12-03 00:27:07] total 1307792
[2025-12-03 00:27:07] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 09:56 pilot3.tar.gz
[2025-12-03 00:27:07] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 10:03 queuedata.json
[2025-12-03 00:27:07] -rwx------. 1 boincer umatlas     36292 Nov 23 10:04 runpilot2-wrapper.sh
[2025-12-03 00:27:07] -rw-r--r--. 1 boincer umatlas       100 Dec  2 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 00:27:07] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 17:31 run_atlas
[2025-12-03 00:27:07] -rw-r--r--. 1 boincer umatlas       105 Dec  2 17:31 job.xml
[2025-12-03 00:27:07] -rw-r--r--. 2 boincer umatlas 409138899 Dec  2 17:31 EVNT.47483658._000784.pool.root.1
[2025-12-03 00:27:07] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 17:31 start_atlas.sh
[2025-12-03 00:27:07] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 17:31 shared
[2025-12-03 00:27:07] -rw-r--r--. 2 boincer umatlas    590104 Dec  2 17:31 input.tar.gz
[2025-12-03 00:27:07] -rw-r--r--. 1 boincer umatlas         0 Dec  2 17:31 boinc_lockfile
[2025-12-03 00:27:07] -rw-r--r--. 1 boincer umatlas      2785 Dec  2 17:31 pandaJob.out
[2025-12-03 00:27:07] -rw-------. 1 boincer umatlas        57 Dec  2 17:31 setup.sh.local
[2025-12-03 00:27:07] -rw-------. 1 boincer umatlas    989292 Dec  2 17:32 agis_schedconf.cvmfs.json
[2025-12-03 00:27:07] drwx------. 5 boincer umatlas      4096 Dec  2 17:32 pilot3
[2025-12-03 00:27:07] -rw-r--r--. 1 boincer umatlas       533 Dec  2 23:55 boinc_task_state.xml
[2025-12-03 00:27:07] -rw-r--r--. 1 boincer umatlas      7172 Dec  3 00:19 init_data.xml
[2025-12-03 00:27:07] -rw-------. 1 boincer umatlas 916272802 Dec  3 00:24 HITS.47556137._007725.pool.root.1
[2025-12-03 00:27:07] -rw-------. 1 boincer umatlas      1061 Dec  3 00:25 memory_monitor_summary.json
[2025-12-03 00:27:07] -rw-------. 1 boincer umatlas   1516240 Dec  3 00:25 agis_ddmendpoints.agis.ALL.json
[2025-12-03 00:27:07] -rw-------. 1 boincer umatlas   1694432 Dec  3 00:25 log.47556137._007725.job.log.tgz.1
[2025-12-03 00:27:07] -rw-------. 1 boincer umatlas      8629 Dec  3 00:26 heartbeat.json
[2025-12-03 00:27:07] -rw-r--r--. 1 boincer umatlas        29 Dec  3 00:27 wrapper_checkpoint.txt
[2025-12-03 00:27:07] -rw-------. 1 boincer umatlas        95 Dec  3 00:27 pilot_heartbeat.json
[2025-12-03 00:27:07] -rw-------. 1 boincer umatlas       823 Dec  3 00:27 pilotlog.txt
[2025-12-03 00:27:07] -rw-------. 1 boincer umatlas   3228162 Dec  3 00:27 log.47556137._007725.job.log.1
[2025-12-03 00:27:07] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 00:27 boinc_mmap_file
[2025-12-03 00:27:07] -rw-------. 1 boincer umatlas       353 Dec  3 00:27 output.list
[2025-12-03 00:27:07] -rw-r--r--. 1 boincer umatlas       620 Dec  3 00:27 runtime_log
[2025-12-03 00:27:07] -rw-------. 1 boincer umatlas   4945920 Dec  3 00:27 result.tar.gz
[2025-12-03 00:27:07] -rw-------. 1 boincer umatlas       664 Dec  3 00:27 yfINDmmoQh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmezKKDmVgcPIn.diag
[2025-12-03 00:27:07] -rw-r--r--. 1 boincer umatlas      9338 Dec  3 00:27 runtime_log.err
[2025-12-03 00:27:07] -rw-r--r--. 1 boincer umatlas     21868 Dec  3 00:27 stderr.txt
[2025-12-03 00:27:08] HITS file was successfully produced:
[2025-12-03 00:27:08] -rw-------. 1 boincer umatlas 916272802 Dec  3 00:24 shared/HITS.pool.root.1
[2025-12-03 00:27:08]  *** Contents of shared directory: ***
[2025-12-03 00:27:08] total 1299788
[2025-12-03 00:27:08] -rw-r--r--. 2 boincer umatlas 409138899 Dec  2 17:31 ATLAS.root_0
[2025-12-03 00:27:08] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 17:31 start_atlas.sh
[2025-12-03 00:27:08] -rw-r--r--. 2 boincer umatlas    590104 Dec  2 17:31 input.tar.gz
[2025-12-03 00:27:08] -rw-------. 1 boincer umatlas 916272802 Dec  3 00:24 HITS.pool.root.1
[2025-12-03 00:27:08] -rw-------. 1 boincer umatlas   4945920 Dec  3 00:27 result.tar.gz
00:27:29 (1701831): run_atlas exited; CPU time 132965.328636
00:27:29 (1701831): called boinc_finish(0)

</stderr_txt>
]]>

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