Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:19:45 (743662): wrapper (7.7.26015): starting
16:19:45 (743662): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 16:19:45] Arguments: --nthreads 8
[2025-12-02 16:19:45] Threads: 8
[2025-12-02 16:19:45] Checking for CVMFS
[2025-12-02 16:19:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 16:19:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 16:19:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 16:19:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 16:19:45] 2.13.2.0 8902 45014 281500 153569 2 155 37519623 40960000 21660 16776704 0 104208484 99.604 116045190 36173 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 16:19:45] CVMFS is ok
[2025-12-02 16:19:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 16:19:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 16:19:45] Further information can be found at the LHC@home message board.
[2025-12-02 16:19:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 16:19:45] Checking for apptainer binary...
[2025-12-02 16:19:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 16:19:45] Running /usr/bin/apptainer --version
[2025-12-02 16:19:45] apptainer version 1.4.4-1.el9
[2025-12-02 16:19:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 16:19:46] c-211-35-2.aglt2.org
[2025-12-02 16:19:46] apptainer works
[2025-12-02 16:19:46] Set ATHENA_PROC_NUMBER=8
[2025-12-02 16:19:46] Set ATHENA_CORE_NUMBER=8
[2025-12-02 16:19:46] Starting ATLAS job with PandaID=6908987259
[2025-12-02 16:19:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 00:00:27]  *** The last 200 lines of the pilot log: ***
[2025-12-03 00:00:27] 2025-12-03 02:13:15,403 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2588.460239583334
[2025-12-03 00:00:27] 2025-12-03 02:13:15,460 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6908987259/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 00:00:27] 2025-12-03 02:13:15,461 | INFO     | extracted standard info from prmon json
[2025-12-03 00:00:27] 2025-12-03 02:13:15,461 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 00:00:27] 2025-12-03 02:13:15,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 00:00:27] 2025-12-03 02:13:15,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-03 00:00:27] 2025-12-03 02:13:15,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-03 00:00:27] 2025-12-03 02:13:15,468 | INFO     | fitting pss+swap vs Time
[2025-12-03 00:00:27] 2025-12-03 02:13:15,469 | INFO     | sum of square deviations: 7407461724.496524
[2025-12-03 00:00:27] 2025-12-03 02:13:15,471 | INFO     | sum of deviations: -79796322267.25696
[2025-12-03 00:00:27] 2025-12-03 02:13:15,471 | INFO     | mean x: 1764719187.8090277
[2025-12-03 00:00:27] 2025-12-03 02:13:15,472 | INFO     | mean y: 2569911.8680555555
[2025-12-03 00:00:27] 2025-12-03 02:13:15,472 | INFO     | intersect: 19012874150.89433
[2025-12-03 00:00:27] 2025-12-03 02:13:15,472 | INFO     | chi2: 3.2067750844087204
[2025-12-03 00:00:27] 2025-12-03 02:13:15,473 | INFO     | sum of square deviations: 7028338854.636046
[2025-12-03 00:00:27] 2025-12-03 02:13:15,475 | INFO     | sum of deviations: -40868434541.65368
[2025-12-03 00:00:27] 2025-12-03 02:13:15,480 | INFO     | mean x: 1764719035.310954
[2025-12-03 00:00:27] 2025-12-03 02:13:15,480 | INFO     | mean y: 2585412.7915194347
[2025-12-03 00:00:27] 2025-12-03 02:13:15,480 | INFO     | intersect: 10264086155.80751
[2025-12-03 00:00:27] 2025-12-03 02:13:15,481 | INFO     | chi2: 1.7749553273637992
[2025-12-03 00:00:27] 2025-12-03 02:13:15,481 | INFO     | current chi2=1.7749553273637992 (change=44.649834159133945 %)
[2025-12-03 00:00:27] 2025-12-03 02:13:15,481 | INFO     | sum of square deviations: 6662292209.312971
[2025-12-03 00:00:27] 2025-12-03 02:13:15,488 | INFO     | sum of deviations: -39957577691.31654
[2025-12-03 00:00:27] 2025-12-03 02:13:15,488 | INFO     | mean x: 1764718882.794964
[2025-12-03 00:00:27] 2025-12-03 02:13:15,488 | INFO     | mean y: 2585792.345323741
[2025-12-03 00:00:27] 2025-12-03 02:13:15,488 | INFO     | intersect: 10586614479.055336
[2025-12-03 00:00:27] 2025-12-03 02:13:15,489 | INFO     | chi2: 1.7730148517705353
[2025-12-03 00:00:27] 2025-12-03 02:13:15,489 | INFO     | current chi2=1.7730148517705353 (change=0.10932532009951879 %)
[2025-12-03 00:00:27] 2025-12-03 02:13:15,489 | INFO     | right removable region: 277
[2025-12-03 00:00:27] 2025-12-03 02:13:15,490 | INFO     | sum of square deviations: 7028301889.010631
[2025-12-03 00:00:27] 2025-12-03 02:13:15,496 | INFO     | sum of deviations: -127038711154.75278
[2025-12-03 00:00:27] 2025-12-03 02:13:15,496 | INFO     | mean x: 1764719340.3144877
[2025-12-03 00:00:27] 2025-12-03 02:13:15,496 | INFO     | mean y: 2588775.671378092
[2025-12-03 00:00:27] 2025-12-03 02:13:15,496 | INFO     | intersect: 31900431822.78853
[2025-12-03 00:00:27] 2025-12-03 02:13:15,497 | INFO     | chi2: 1.7155829844291755
[2025-12-03 00:00:27] 2025-12-03 02:13:15,497 | INFO     | current chi2=1.7155829844291755 (change=46.50129992682345 %)
[2025-12-03 00:00:27] 2025-12-03 02:13:15,497 | INFO     | sum of square deviations: 6662322231.6438875
[2025-12-03 00:00:27] 2025-12-03 02:13:15,503 | INFO     | sum of deviations: -119552522175.78772
[2025-12-03 00:00:27] 2025-12-03 02:13:15,504 | INFO     | mean x: 1764719492.8165467
[2025-12-03 00:00:27] 2025-12-03 02:13:15,504 | INFO     | mean y: 2585636.866906475
[2025-12-03 00:00:27] 2025-12-03 02:13:15,504 | INFO     | intersect: 31669721954.12934
[2025-12-03 00:00:27] 2025-12-03 02:13:15,508 | INFO     | chi2: 1.7040702109575578
[2025-12-03 00:00:27] 2025-12-03 02:13:15,509 | INFO     | current chi2=1.7040702109575578 (change=0.6710706259101915 %)
[2025-12-03 00:00:27] 2025-12-03 02:13:15,509 | INFO     | left removable region: 20
[2025-12-03 00:00:27] 2025-12-03 02:13:15,509 | INFO     | sum of square deviations: 5263649345.097254
[2025-12-03 00:00:27] 2025-12-03 02:13:15,511 | INFO     | sum of deviations: -59348232273.32686
[2025-12-03 00:00:27] 2025-12-03 02:13:15,516 | INFO     | mean x: 1764719462.311284
[2025-12-03 00:00:27] 2025-12-03 02:13:15,516 | INFO     | mean y: 2593273.3540856033
[2025-12-03 00:00:27] 2025-12-03 02:13:15,516 | INFO     | intersect: 19900001645.37311
[2025-12-03 00:00:27] 2025-12-03 02:13:15,516 | INFO     | chi2: 0.20215067682326843
[2025-12-03 00:00:27] 2025-12-03 02:13:15,517 | INFO     | current memory leak: -11.28 B/s (using 257 data points, chi2=0.20)
[2025-12-03 00:00:27] 2025-12-03 02:13:15,517 | INFO     | could have reported an average CPU frequency of 2590 MHz (13 samples)
[2025-12-03 00:00:27] 2025-12-03 02:13:15,518 | INFO     | ..............................
[2025-12-03 00:00:27] 2025-12-03 02:13:15,518 | INFO     | . Timing measurements:
[2025-12-03 00:00:27] 2025-12-03 02:13:15,518 | INFO     | . get job = 0 s
[2025-12-03 00:00:27] 2025-12-03 02:13:15,518 | INFO     | . initial setup = 2 s
[2025-12-03 00:00:27] 2025-12-03 02:13:15,518 | INFO     | . payload setup = 8 s
[2025-12-03 00:00:27] 2025-12-03 02:13:15,518 | INFO     | . stage-in = 0 s
[2025-12-03 00:00:27] 2025-12-03 02:13:15,518 | INFO     | . payload execution = 17525 s
[2025-12-03 00:00:27] 2025-12-03 02:13:15,518 | INFO     | . stage-out = 5 s
[2025-12-03 00:00:27] 2025-12-03 02:13:15,518 | INFO     | . log creation = 0 s
[2025-12-03 00:00:27] 2025-12-03 02:13:15,518 | INFO     | ..............................
[2025-12-03 00:00:27] 2025-12-03 02:13:15,743 | INFO     | 
[2025-12-03 00:00:27] 2025-12-03 02:13:15,744 | INFO     | job summary report
[2025-12-03 00:00:27] 2025-12-03 02:13:15,744 | INFO     | --------------------------------------------------
[2025-12-03 00:00:27] 2025-12-03 02:13:15,744 | INFO     | PanDA job id: 6908987259
[2025-12-03 00:00:27] 2025-12-03 02:13:15,744 | INFO     | task id: 46965017
[2025-12-03 00:00:27] 2025-12-03 02:13:15,744 | INFO     | errors: (none)
[2025-12-03 00:00:27] 2025-12-03 02:13:15,744 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 00:00:27] 2025-12-03 02:13:15,744 | INFO     | pilot state: finished 
[2025-12-03 00:00:27] 2025-12-03 02:13:15,744 | INFO     | transexitcode: 0
[2025-12-03 00:00:27] 2025-12-03 02:13:15,744 | INFO     | exeerrorcode: 0
[2025-12-03 00:00:27] 2025-12-03 02:13:15,744 | INFO     | exeerrordiag: 
[2025-12-03 00:00:27] 2025-12-03 02:13:15,744 | INFO     | exitcode: 0
[2025-12-03 00:00:27] 2025-12-03 02:13:15,745 | INFO     | exitmsg: OK
[2025-12-03 00:00:27] 2025-12-03 02:13:15,745 | INFO     | cpuconsumptiontime: 49806 s
[2025-12-03 00:00:27] 2025-12-03 02:13:15,745 | INFO     | nevents: 400
[2025-12-03 00:00:27] 2025-12-03 02:13:15,745 | INFO     | neventsw: 0
[2025-12-03 00:00:27] 2025-12-03 02:13:15,745 | INFO     | pid: 766697
[2025-12-03 00:00:27] 2025-12-03 02:13:15,745 | INFO     | pgrp: 766697
[2025-12-03 00:00:27] 2025-12-03 02:13:15,745 | INFO     | corecount: 8
[2025-12-03 00:00:27] 2025-12-03 02:13:15,745 | INFO     | event service: False
[2025-12-03 00:00:27] 2025-12-03 02:13:15,745 | INFO     | sizes: {0: 2283152, 1: 2284008, 8: 2284270, 12: 2284298, 17535: 2316295, 17541: 2325293, 17545: 2325477, 17577: 2325671}
[2025-12-03 00:00:27] 2025-12-03 02:13:15,745 | INFO     | --------------------------------------------------
[2025-12-03 00:00:27] 2025-12-03 02:13:15,745 | INFO     | 
[2025-12-03 00:00:27] 2025-12-03 02:13:15,745 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-12-03 00:00:27] 2025-12-03 02:13:15,860 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,865 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,865 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,865 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,866 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,866 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 00:00:27] 2025-12-03 02:13:15,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,866 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 00:00:27] 2025-12-03 02:13:15,866 | INFO     | job 6908987259 has completed (purged errors)
[2025-12-03 00:00:27] 2025-12-03 02:13:15,867 | INFO     | overall cleanup function is called
[2025-12-03 00:00:27] 2025-12-03 02:13:16,884 | INFO     | --- collectZombieJob: --- 10, [766697]
[2025-12-03 00:00:27] 2025-12-03 02:13:16,885 | INFO     | zombie collector waiting for pid 766697
[2025-12-03 00:00:27] 2025-12-03 02:13:16,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 00:00:27] 2025-12-03 02:13:16,885 | INFO     | collected zombie processes
[2025-12-03 00:00:27] 2025-12-03 02:13:16,885 | INFO     | will attempt to kill all subprocesses of pid=766697
[2025-12-03 00:00:27] 2025-12-03 02:13:18,044 | INFO     | process IDs to be killed: [766697] (in reverse order)
[2025-12-03 00:00:27] 2025-12-03 02:13:18,320 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 00:00:27] 2025-12-03 02:13:18,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 00:00:27] 2025-12-03 02:13:18,373 | INFO     | did not find any defunct processes belonging to 766697
[2025-12-03 00:00:27] 2025-12-03 02:13:18,474 | INFO     | did not find any defunct processes belonging to 766697
[2025-12-03 00:00:27] 2025-12-03 02:13:18,499 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 00:00:27] 2025-12-03 02:13:18,499 | INFO     | ready for new job
[2025-12-03 00:00:27] 2025-12-03 02:13:18,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 00:00:27] 2025-12-03 02:13:18,502 | INFO     | ***************************************
[2025-12-03 00:00:27] 2025-12-03 02:13:18,502 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 00:00:27] 2025-12-03 02:13:18,502 | INFO     | ***************************************
[2025-12-03 00:00:27] 2025-12-03 02:13:18,520 | INFO     | 
[2025-12-03 00:00:27] 2025-12-03 02:13:18,544 | INFO     | architecture information:
[2025-12-03 00:00:27] 2025-12-03 02:13:18,551 | INFO     | executing command: cat /etc/os-release
[2025-12-03 00:00:27] 2025-12-03 02:13:18,625 | INFO     | cat /etc/os-release:
[2025-12-03 00:00:27] NAME="CentOS Linux"
[2025-12-03 00:00:27] VERSION="7 (Core)"
[2025-12-03 00:00:27] ID="centos"
[2025-12-03 00:00:27] ID_LIKE="rhel fedora"
[2025-12-03 00:00:27] VERSION_ID="7"
[2025-12-03 00:00:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 00:00:27] ANSI_COLOR="0;31"
[2025-12-03 00:00:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 00:00:27] HOME_URL="https://www.centos.org/"
[2025-12-03 00:00:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 00:00:27] 
[2025-12-03 00:00:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 00:00:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 00:00:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 00:00:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 00:00:27] 
[2025-12-03 00:00:27] 2025-12-03 02:13:18,625 | INFO     | ***************************************
[2025-12-03 00:00:27] 2025-12-03 02:13:19,129 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-12-03 00:00:27] 2025-12-03 02:13:19,204 | INFO     | sufficient remaining disk space (123696316416 B)
[2025-12-03 00:00:27] 2025-12-03 02:13:19,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 00:00:27] 2025-12-03 02:13:19,205 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 00:00:27] 2025-12-03 02:13:19,205 | INFO     | update_server=False
[2025-12-03 00:00:27] 2025-12-03 02:13:19,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 00:00:27] 2025-12-03 02:13:19,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 00:00:27] 2025-12-03 02:13:19,412 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-03 00:00:27] 2025-12-03 02:13:19,413 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-03 00:00:27] 2025-12-03 02:13:19,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 00:00:27] 2025-12-03 02:13:19,413 | INFO     | will abort loop
[2025-12-03 00:00:27] 2025-12-03 02:13:19,421 | INFO     | all data control threads have been joined
[2025-12-03 00:00:27] 2025-12-03 02:13:19,665 | INFO     | all job control threads have been joined
[2025-12-03 00:00:27] 2025-12-03 02:13:20,211 | INFO     | [job] retrieve thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:20,273 | INFO     | all payload control threads have been joined
[2025-12-03 00:00:27] 2025-12-03 02:13:20,352 | INFO     | [payload] validate_post thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:20,419 | INFO     | [job] job monitor thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:20,428 | INFO     | [data] control thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:20,477 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:20,477 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:20,521 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:20,522 | INFO     | [job] validate thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:20,671 | INFO     | [job] control thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:20,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 00:00:27] 2025-12-03 02:13:21,227 | INFO     | [data] copytool_out thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:21,290 | INFO     | [payload] control thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:21,493 | INFO     | [payload] failed_post thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:21,627 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:21,693 | INFO     | [data] copytool_in thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:21,762 | INFO     | [job] queue monitor thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:21,901 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 00:00:27] 2025-12-03 02:13:25,910 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 00:00:27] 2025-12-03 02:13:31,259 | INFO     | [monitor] cgroup control has ended
[2025-12-03 00:00:27] 2025-12-03 02:13:32,248 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139775198504768)>', '<ExcThread(monitor, started 139774719411968)>']
[2025-12-03 00:00:27] 2025-12-03 02:13:37,273 | INFO     | all workflow threads have been joined
[2025-12-03 00:00:27] 2025-12-03 02:13:37,274 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 00:00:27] 2025-12-03 02:13:37,274 | INFO     | traces error code: 0
[2025-12-03 00:00:27] 2025-12-03 02:13:37,274 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 00:00:27] 2025-12-03 02:13:52,339 | INFO     | PID=749702 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-03 00:00:27] 2025-12-03 02:13:52,357 | INFO     | .. there are 25 such processes running
[2025-12-03 00:00:27] 2025-12-03 02:13:52,359 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 00:00:27] 2025-12-03 02:13:52,359 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 00:00:27] 2025-12-03 02:13:52,359 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 00:00:27] 2025-12-03 02:13:52,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 00:00:27] 2025-12-03 02:13:52,359 | INFO     | [monitor] control thread has ended
[2025-12-03 00:00:27] 2025-12-03 02:13:52,787 [wrapper] ==== pilot stdout END ====
[2025-12-03 00:00:27] 2025-12-03 02:13:52,805 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 00:00:27] 2025-12-03 02:13:52,820 [wrapper] pilotpid: 749702
[2025-12-03 00:00:27] 2025-12-03 02:13:52,834 [wrapper] Pilot exit status: 0
[2025-12-03 00:00:27] 2025-12-03 02:13:53,009 [wrapper] pandaids: 6908987259
[2025-12-03 00:00:27] 2025-12-03 02:13:53,402 [wrapper] cleanup supervisor_pilot 1534971 749703
[2025-12-03 00:00:27] 2025-12-03 02:13:53,426 [wrapper] Test setup, not cleaning
[2025-12-03 00:00:27] 2025-12-03 02:13:53,437 [wrapper] apfmon messages muted
[2025-12-03 00:00:27] 2025-12-03 02:13:53,457 [wrapper] ==== wrapper stdout END ====
[2025-12-03 00:00:27] 2025-12-03 02:13:53,480 [wrapper] ==== wrapper stderr END ====
[2025-12-03 00:00:27]  *** Error codes and diagnostics ***
[2025-12-03 00:00:27]     "exeErrorCode": 0,
[2025-12-03 00:00:27]     "exeErrorDiag": "",
[2025-12-03 00:00:27]     "pilotErrorCode": 0,
[2025-12-03 00:00:27]     "pilotErrorDiag": "",
[2025-12-03 00:00:27]  *** Listing of results directory ***
[2025-12-03 00:00:27] total 457312
[2025-12-03 00:00:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 30 06:05 pilot3.tar.gz
[2025-12-03 00:00:27] -rwx------. 1 boincer umatlas     36292 Nov 30 06:08 runpilot2-wrapper.sh
[2025-12-03 00:00:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 30 06:08 queuedata.json
[2025-12-03 00:00:27] -rw-r--r--. 1 boincer umatlas       100 Dec  2 16:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 00:00:27] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 16:19 run_atlas
[2025-12-03 00:00:27] -rw-r--r--. 1 boincer umatlas       105 Dec  2 16:19 job.xml
[2025-12-03 00:00:27] -rw-r--r--. 2 boincer umatlas 272618607 Dec  2 16:19 EVNT.46965009._000054.pool.root.1
[2025-12-03 00:00:27] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 16:19 start_atlas.sh
[2025-12-03 00:00:27] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 16:19 shared
[2025-12-03 00:00:27] -rw-r--r--. 2 boincer umatlas    589970 Dec  2 16:19 input.tar.gz
[2025-12-03 00:00:27] -rw-r--r--. 1 boincer umatlas         0 Dec  2 16:19 boinc_lockfile
[2025-12-03 00:00:27] -rw-r--r--. 1 boincer umatlas      2652 Dec  2 16:19 pandaJob.out
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas        57 Dec  2 16:19 setup.sh.local
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas    989224 Dec  2 16:19 agis_schedconf.cvmfs.json
[2025-12-03 00:00:27] drwx------. 5 boincer umatlas      4096 Dec  2 16:20 pilot3
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas 186436012 Dec  2 21:10 HITS.46965017._001417.pool.root.1
[2025-12-03 00:00:27] -rw-r--r--. 1 boincer umatlas       529 Dec  2 21:11 boinc_task_state.xml
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas      1047 Dec  2 21:12 memory_monitor_summary.json
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas   1516240 Dec  2 21:12 agis_ddmendpoints.agis.ALL.json
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas    500951 Dec  2 21:12 log.46965017._001417.job.log.tgz.1
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas      7830 Dec  2 21:13 heartbeat.json
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas       822 Dec  2 21:13 pilotlog.txt
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas        95 Dec  2 21:13 pilot_heartbeat.json
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas   2162268 Dec  2 21:13 log.46965017._001417.job.log.1
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas       357 Dec  2 21:13 output.list
[2025-12-03 00:00:27] -rw-r--r--. 1 boincer umatlas       620 Dec  2 21:13 runtime_log
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas   2682880 Dec  2 21:13 result.tar.gz
[2025-12-03 00:00:27] -rw-r--r--. 1 boincer umatlas      9353 Dec  2 21:13 runtime_log.err
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas       658 Dec  2 21:13 HoHLDm8Suj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmybPKDm7oSghm.diag
[2025-12-03 00:00:27] -rw-r--r--. 1 boincer umatlas      6879 Dec  3 00:00 init_data.xml
[2025-12-03 00:00:27] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 00:00 boinc_mmap_file
[2025-12-03 00:00:27] -rw-r--r--. 1 boincer umatlas        26 Dec  3 00:00 wrapper_checkpoint.txt
[2025-12-03 00:00:27] -rw-r--r--. 1 boincer umatlas     21293 Dec  3 00:00 stderr.txt
[2025-12-03 00:00:27] HITS file was successfully produced:
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas 186436012 Dec  2 21:10 shared/HITS.pool.root.1
[2025-12-03 00:00:27]  *** Contents of shared directory: ***
[2025-12-03 00:00:27] total 451520
[2025-12-03 00:00:27] -rw-r--r--. 2 boincer umatlas 272618607 Dec  2 16:19 ATLAS.root_0
[2025-12-03 00:00:27] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 16:19 start_atlas.sh
[2025-12-03 00:00:27] -rw-r--r--. 2 boincer umatlas    589970 Dec  2 16:19 input.tar.gz
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas 186436012 Dec  2 21:10 HITS.pool.root.1
[2025-12-03 00:00:27] -rw-------. 1 boincer umatlas   2682880 Dec  2 21:13 result.tar.gz
00:00:29 (743662): run_atlas exited; CPU time 50564.977473
00:00:29 (743662): called boinc_finish(0)

</stderr_txt>
]]>

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