Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:09:16 (3385): wrapper (7.7.26015): starting
16:09:16 (3385): wrapper: running run_atlas (--nthreads 12)
[2025-12-02 16:09:16] Arguments: --nthreads 12
[2025-12-02 16:09:16] Threads: 12
[2025-12-02 16:09:16] Checking for CVMFS
[2025-12-02 16:09:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 16:09:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 16:09:16] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 16:09:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 16:09:16] 2.11.2.0 2913 296843 96060 153568 2 81 15857444 20275200 1 130560 1 134124468 99.963 17826928 14036 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 16:09:16] CVMFS is ok
[2025-12-02 16:09:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 16:09:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 16:09:16] Further information can be found at the LHC@home message board.
[2025-12-02 16:09:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 16:09:16] Checking for apptainer binary...
[2025-12-02 16:09:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 16:09:16] Running /usr/bin/apptainer --version
[2025-12-02 16:09:16] apptainer version 1.3.2-1.el7
[2025-12-02 16:09:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 16:09:18] c-205-6.aglt2.org
[2025-12-02 16:09:18] apptainer works
[2025-12-02 16:09:18] Set ATHENA_PROC_NUMBER=12
[2025-12-02 16:09:18] Set ATHENA_CORE_NUMBER=12
[2025-12-02 16:09:18] Starting ATLAS job with PandaID=6901063801
[2025-12-02 16:09:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 23:26:23]  *** The last 200 lines of the pilot log: ***
[2025-12-02 23:26:23] 2025-12-03 04:25:49,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 23:26:23] 2025-12-03 04:25:49,988 | INFO     | time since job start (26176s) is within the limit (172800.0s)
[2025-12-02 23:26:23] 2025-12-03 04:25:50,613 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-02 23:26:23] 2025-12-03 04:25:50,617 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-12-02 23:26:23] 2025-12-03 04:25:50,620 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6901063801/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 23:26:23] 2025-12-03 04:25:50,620 | INFO     | extracted standard info from prmon json
[2025-12-02 23:26:23] 2025-12-03 04:25:50,620 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 23:26:23] 2025-12-03 04:25:50,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 23:26:23] 2025-12-03 04:25:50,627 | INFO     | fitting pss+swap vs Time
[2025-12-02 23:26:23] 2025-12-03 04:25:50,628 | INFO     | sum of square deviations: 24481978947.118877
[2025-12-02 23:26:23] 2025-12-03 04:25:50,632 | INFO     | sum of deviations: 428647235647.0419
[2025-12-02 23:26:23] 2025-12-03 04:25:50,632 | INFO     | mean x: 1764722856.2097902
[2025-12-02 23:26:23] 2025-12-03 04:25:50,632 | INFO     | mean y: 3427918.132867133
[2025-12-02 23:26:23] 2025-12-03 04:25:50,632 | INFO     | intersect: -30894547103.878155
[2025-12-02 23:26:23] 2025-12-03 04:25:50,633 | INFO     | chi2: 6.082345386514787
[2025-12-02 23:26:23] 2025-12-03 04:25:50,633 | INFO     | sum of square deviations: 23635925416.896297
[2025-12-02 23:26:23] 2025-12-03 04:25:50,637 | INFO     | sum of deviations: 598010045914.8303
[2025-12-02 23:26:23] 2025-12-03 04:25:50,637 | INFO     | mean x: 1764722703.712264
[2025-12-02 23:26:23] 2025-12-03 04:25:50,637 | INFO     | mean y: 3458421.8018867923
[2025-12-02 23:26:23] 2025-12-03 04:25:50,637 | INFO     | intersect: -44645603819.67526
[2025-12-02 23:26:23] 2025-12-03 04:25:50,638 | INFO     | chi2: 2.8545430710162343
[2025-12-02 23:26:23] 2025-12-03 04:25:50,638 | INFO     | current chi2=2.8545430710162343 (change=53.068382513346535 %)
[2025-12-02 23:26:23] 2025-12-03 04:25:50,639 | INFO     | sum of square deviations: 22809593186.66799
[2025-12-02 23:26:23] 2025-12-03 04:25:50,642 | INFO     | sum of deviations: 611406725879.68
[2025-12-02 23:26:23] 2025-12-03 04:25:50,643 | INFO     | mean x: 1764722551.214797
[2025-12-02 23:26:23] 2025-12-03 04:25:50,643 | INFO     | mean y: 3460856.8257756564
[2025-12-02 23:26:23] 2025-12-03 04:25:50,643 | INFO     | intersect: -47299585203.41346
[2025-12-02 23:26:23] 2025-12-03 04:25:50,643 | INFO     | chi2: 2.66581963239619
[2025-12-02 23:26:23] 2025-12-03 04:25:50,643 | INFO     | current chi2=2.66581963239619 (change=6.611336172722648 %)
[2025-12-02 23:26:23] 2025-12-03 04:25:50,644 | INFO     | right removable region: 418
[2025-12-02 23:26:23] 2025-12-03 04:25:50,644 | INFO     | sum of square deviations: 23635870516.8963
[2025-12-02 23:26:23] 2025-12-03 04:25:50,648 | INFO     | sum of deviations: 281848956202.7171
[2025-12-02 23:26:23] 2025-12-03 04:25:50,648 | INFO     | mean x: 1764723008.712264
[2025-12-02 23:26:23] 2025-12-03 04:25:50,648 | INFO     | mean y: 3454304.169811321
[2025-12-02 23:26:23] 2025-12-03 04:25:50,648 | INFO     | intersect: -21040210562.622803
[2025-12-02 23:26:23] 2025-12-03 04:25:50,649 | INFO     | chi2: 3.6580835228203314
[2025-12-02 23:26:23] 2025-12-03 04:25:50,649 | INFO     | current chi2=3.6580835228203314 (change=39.85735287360209 %)
[2025-12-02 23:26:23] 2025-12-03 04:25:50,649 | INFO     | sum of square deviations: 22809509372.095356
[2025-12-02 23:26:23] 2025-12-03 04:25:50,653 | INFO     | sum of deviations: 241512961163.6895
[2025-12-02 23:26:23] 2025-12-03 04:25:50,653 | INFO     | mean x: 1764723161.2124104
[2025-12-02 23:26:23] 2025-12-03 04:25:50,653 | INFO     | mean y: 3461744.0596658713
[2025-12-02 23:26:23] 2025-12-03 04:25:50,653 | INFO     | intersect: -18681881695.197475
[2025-12-02 23:26:23] 2025-12-03 04:25:50,654 | INFO     | chi2: 3.5719722349835163
[2025-12-02 23:26:23] 2025-12-03 04:25:50,654 | INFO     | current chi2=3.5719722349835163 (change=2.354000046735524 %)
[2025-12-02 23:26:23] 2025-12-03 04:25:50,654 | INFO     | left removable region: 20
[2025-12-02 23:26:23] 2025-12-03 04:25:50,655 | INFO     | sum of square deviations: 19549036157.771343
[2025-12-02 23:26:23] 2025-12-03 04:25:50,658 | INFO     | sum of deviations: 366890227399.15875
[2025-12-02 23:26:23] 2025-12-03 04:25:50,658 | INFO     | mean x: 1764723130.7110553
[2025-12-02 23:26:23] 2025-12-03 04:25:50,658 | INFO     | mean y: 3507029.1231155777
[2025-12-02 23:26:23] 2025-12-03 04:25:50,659 | INFO     | intersect: -33116267546.860226
[2025-12-02 23:26:23] 2025-12-03 04:25:50,659 | INFO     | chi2: 0.06902146764406394
[2025-12-02 23:26:23] 2025-12-03 04:25:50,659 | INFO     | current memory leak: 18.77 B/s (using 398 data points, chi2=0.07)
[2025-12-02 23:26:23] 2025-12-03 04:25:50,660 | INFO     | could have reported an average CPU frequency of 2403 MHz (18 samples)
[2025-12-02 23:26:23] 2025-12-03 04:25:50,660 | INFO     | ..............................
[2025-12-02 23:26:23] 2025-12-03 04:25:50,660 | INFO     | . Timing measurements:
[2025-12-02 23:26:23] 2025-12-03 04:25:50,660 | INFO     | . get job = 0 s
[2025-12-02 23:26:23] 2025-12-03 04:25:50,660 | INFO     | . initial setup = 2 s
[2025-12-02 23:26:23] 2025-12-03 04:25:50,660 | INFO     | . payload setup = 7 s
[2025-12-02 23:26:23] 2025-12-03 04:25:50,660 | INFO     | . stage-in = 0 s
[2025-12-02 23:26:23] 2025-12-03 04:25:50,660 | INFO     | . payload execution = 26140 s
[2025-12-02 23:26:23] 2025-12-03 04:25:50,660 | INFO     | . stage-out = 3 s
[2025-12-02 23:26:23] 2025-12-03 04:25:50,661 | INFO     | . log creation = 0 s
[2025-12-02 23:26:23] 2025-12-03 04:25:50,661 | INFO     | ..............................
[2025-12-02 23:26:23] 2025-12-03 04:25:50,963 | INFO     | 
[2025-12-02 23:26:23] 2025-12-03 04:25:50,964 | INFO     | job summary report
[2025-12-02 23:26:23] 2025-12-03 04:25:50,970 | INFO     | --------------------------------------------------
[2025-12-02 23:26:23] 2025-12-03 04:25:50,970 | INFO     | PanDA job id: 6901063801
[2025-12-02 23:26:23] 2025-12-03 04:25:50,971 | INFO     | task id: 47556185
[2025-12-02 23:26:23] 2025-12-03 04:25:50,971 | INFO     | errors: (none)
[2025-12-02 23:26:23] 2025-12-03 04:25:50,971 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 23:26:23] 2025-12-03 04:25:50,971 | INFO     | pilot state: finished 
[2025-12-02 23:26:23] 2025-12-03 04:25:50,971 | INFO     | transexitcode: 0
[2025-12-02 23:26:23] 2025-12-03 04:25:50,971 | INFO     | exeerrorcode: 0
[2025-12-02 23:26:23] 2025-12-03 04:25:50,972 | INFO     | exeerrordiag: 
[2025-12-02 23:26:23] 2025-12-03 04:25:50,972 | INFO     | exitcode: 0
[2025-12-02 23:26:23] 2025-12-03 04:25:50,972 | INFO     | exitmsg: OK
[2025-12-02 23:26:23] 2025-12-03 04:25:50,972 | INFO     | cpuconsumptiontime: 301303 s
[2025-12-02 23:26:23] 2025-12-03 04:25:50,972 | INFO     | nevents: 1000
[2025-12-02 23:26:23] 2025-12-03 04:25:50,972 | INFO     | neventsw: 0
[2025-12-02 23:26:23] 2025-12-03 04:25:50,972 | INFO     | pid: 13460
[2025-12-02 23:26:23] 2025-12-03 04:25:50,973 | INFO     | pgrp: 13460
[2025-12-02 23:26:23] 2025-12-03 04:25:50,973 | INFO     | corecount: 12
[2025-12-02 23:26:23] 2025-12-03 04:25:50,973 | INFO     | event service: False
[2025-12-02 23:26:23] 2025-12-03 04:25:50,973 | INFO     | sizes: {0: 2284317, 5: 2284579, 11: 2284635, 26150: 2322012, 26151: 2322011, 26154: 2331061, 26156: 2331245, 26161: 2331491}
[2025-12-02 23:26:23] 2025-12-03 04:25:50,973 | INFO     | --------------------------------------------------
[2025-12-02 23:26:23] 2025-12-03 04:25:50,973 | INFO     | 
[2025-12-02 23:26:23] 2025-12-03 04:25:50,974 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-02 23:26:23] 2025-12-03 04:25:50,998 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:50,999 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:50,999 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:50,999 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:50,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:50,999 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,000 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,000 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,000 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,000 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,000 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,000 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,001 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,001 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,001 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,001 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,001 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,001 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 23:26:23] 2025-12-03 04:25:51,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,002 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 23:26:23] 2025-12-03 04:25:51,002 | INFO     | job 6901063801 has completed (purged errors)
[2025-12-02 23:26:23] 2025-12-03 04:25:51,002 | INFO     | overall cleanup function is called
[2025-12-02 23:26:23] 2025-12-03 04:25:52,020 | INFO     | --- collectZombieJob: --- 10, [13460]
[2025-12-02 23:26:23] 2025-12-03 04:25:52,020 | INFO     | zombie collector waiting for pid 13460
[2025-12-02 23:26:23] 2025-12-03 04:25:52,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 23:26:23] 2025-12-03 04:25:52,020 | INFO     | collected zombie processes
[2025-12-02 23:26:23] 2025-12-03 04:25:52,022 | INFO     | will attempt to kill all subprocesses of pid=13460
[2025-12-02 23:26:23] 2025-12-03 04:25:52,113 | INFO     | process IDs to be killed: [13460] (in reverse order)
[2025-12-02 23:26:23] 2025-12-03 04:25:52,163 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 23:26:23] 2025-12-03 04:25:52,164 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 23:26:23] 2025-12-03 04:25:52,167 | INFO     | did not find any defunct processes belonging to 13460
[2025-12-02 23:26:23] 2025-12-03 04:25:52,170 | INFO     | did not find any defunct processes belonging to 13460
[2025-12-02 23:26:23] 2025-12-03 04:25:52,172 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 23:26:23] 2025-12-03 04:25:52,173 | INFO     | ready for new job
[2025-12-02 23:26:23] 2025-12-03 04:25:52,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 23:26:23] 2025-12-03 04:25:52,175 | INFO     | ***************************************
[2025-12-02 23:26:23] 2025-12-03 04:25:52,176 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 23:26:23] 2025-12-03 04:25:52,176 | INFO     | ***************************************
[2025-12-02 23:26:23] 2025-12-03 04:25:52,176 | INFO     | 
[2025-12-02 23:26:23] 2025-12-03 04:25:52,176 | INFO     | architecture information:
[2025-12-02 23:26:23] 2025-12-03 04:25:52,177 | INFO     | executing command: cat /etc/os-release
[2025-12-02 23:26:23] 2025-12-03 04:25:52,192 | INFO     | cat /etc/os-release:
[2025-12-02 23:26:23] NAME="CentOS Linux"
[2025-12-02 23:26:23] VERSION="7 (Core)"
[2025-12-02 23:26:23] ID="centos"
[2025-12-02 23:26:23] ID_LIKE="rhel fedora"
[2025-12-02 23:26:23] VERSION_ID="7"
[2025-12-02 23:26:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 23:26:23] ANSI_COLOR="0;31"
[2025-12-02 23:26:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 23:26:23] HOME_URL="https://www.centos.org/"
[2025-12-02 23:26:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 23:26:23] 
[2025-12-02 23:26:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 23:26:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 23:26:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 23:26:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 23:26:23] 
[2025-12-02 23:26:23] 2025-12-03 04:25:52,193 | INFO     | ***************************************
[2025-12-02 23:26:23] 2025-12-03 04:25:52,696 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-02 23:26:23] 2025-12-03 04:25:52,712 | INFO     | sufficient remaining disk space (28230811648 B)
[2025-12-02 23:26:23] 2025-12-03 04:25:52,713 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 23:26:23] 2025-12-03 04:25:52,713 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 23:26:23] 2025-12-03 04:25:52,713 | INFO     | update_server=False
[2025-12-02 23:26:23] 2025-12-03 04:25:52,713 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 23:26:23] 2025-12-03 04:25:52,714 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 23:26:23] 2025-12-03 04:25:52,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 23:26:23] 2025-12-03 04:25:52,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 23:26:23] 2025-12-03 04:25:52,864 | INFO     | all payload control threads have been joined
[2025-12-02 23:26:23] 2025-12-03 04:25:53,102 | INFO     | all data control threads have been joined
[2025-12-02 23:26:23] 2025-12-03 04:25:53,188 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 23:26:23] 2025-12-03 04:25:53,188 | INFO     | aborting loop
[2025-12-02 23:26:23] 2025-12-03 04:25:53,719 | INFO     | [job] retrieve thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:53,719 | INFO     | [job] queue monitor thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:53,869 | INFO     | [payload] control thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:53,884 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:53,904 | INFO     | all job control threads have been joined
[2025-12-02 23:26:23] 2025-12-03 04:25:54,107 | INFO     | [data] control thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:54,195 | INFO     | [job] job monitor thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:54,219 | INFO     | [data] copytool_in thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:54,347 | INFO     | [payload] failed_post thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:54,475 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:54,587 | INFO     | [payload] validate_post thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:54,716 | INFO     | [data] copytool_out thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:54,764 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:54,910 | INFO     | [job] control thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:55,024 | INFO     | [job] validate thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:25:56,720 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:26:03,320 | INFO     | job.realtimelogging is not enabled
[2025-12-02 23:26:23] 2025-12-03 04:26:04,322 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 23:26:23] 2025-12-03 04:26:15,736 | INFO     | [monitor] cgroup control has ended
[2025-12-02 23:26:23] 2025-12-03 04:26:17,001 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140675958593344)>', '<ExcThread(monitor, started 140674984822528)>']
[2025-12-02 23:26:23] 2025-12-03 04:26:22,027 | INFO     | all workflow threads have been joined
[2025-12-02 23:26:23] 2025-12-03 04:26:22,027 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 23:26:23] 2025-12-03 04:26:22,028 | INFO     | traces error code: 0
[2025-12-02 23:26:23] 2025-12-03 04:26:22,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 23:26:23] 2025-12-03 04:26:23,187 | INFO     | PID=7082 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-02 23:26:23] 2025-12-03 04:26:23,187 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 23:26:23] 2025-12-03 04:26:23,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 23:26:23] 2025-12-03 04:26:23,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 23:26:23] 2025-12-03 04:26:23,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 23:26:23] 2025-12-03 04:26:23,188 | CRITICAL | thread 'MainThread' is not alive
[2025-12-02 23:26:23] 2025-12-03 04:26:23,188 | INFO     | [monitor] control thread has ended
[2025-12-02 23:26:23] 2025-12-03 04:26:23,276 [wrapper] ==== pilot stdout END ====
[2025-12-02 23:26:23] 2025-12-03 04:26:23,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 23:26:23] 2025-12-03 04:26:23,283 [wrapper] pilotpid: 7082
[2025-12-02 23:26:23] 2025-12-03 04:26:23,287 [wrapper] Pilot exit status: 0
[2025-12-02 23:26:23] 2025-12-03 04:26:23,301 [wrapper] pandaids: 6901063801
[2025-12-02 23:26:23] 2025-12-03 04:26:23,340 [wrapper] cleanup supervisor_pilot 24868 7083
[2025-12-02 23:26:23] 2025-12-03 04:26:23,344 [wrapper] Test setup, not cleaning
[2025-12-02 23:26:23] 2025-12-03 04:26:23,348 [wrapper] apfmon messages muted
[2025-12-02 23:26:23] 2025-12-03 04:26:23,352 [wrapper] ==== wrapper stdout END ====
[2025-12-02 23:26:23] 2025-12-03 04:26:23,356 [wrapper] ==== wrapper stderr END ====
[2025-12-02 23:26:23]  *** Error codes and diagnostics ***
[2025-12-02 23:26:23]     "exeErrorCode": 0,
[2025-12-02 23:26:23]     "exeErrorDiag": "",
[2025-12-02 23:26:23]     "pilotErrorCode": 0,
[2025-12-02 23:26:23]     "pilotErrorDiag": "",
[2025-12-02 23:26:23]  *** Listing of results directory ***
[2025-12-02 23:26:23] total 1324652
[2025-12-02 23:26:23] -rw-r--r-- 1 boincer umatlas    576529 Nov 28 05:28 pilot3.tar.gz
[2025-12-02 23:26:23] -rwx------ 1 boincer umatlas     36292 Nov 28 05:31 runpilot2-wrapper.sh
[2025-12-02 23:26:23] -rw-r--r-- 1 boincer umatlas      5112 Nov 28 05:33 queuedata.json
[2025-12-02 23:26:23] -rw-r--r-- 1 boincer umatlas       100 Dec  2 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 23:26:23] -rwxr-xr-x 1 boincer umatlas      7986 Dec  2 16:09 run_atlas
[2025-12-02 23:26:23] -rw-r--r-- 1 boincer umatlas       105 Dec  2 16:09 job.xml
[2025-12-02 23:26:23] -rw-r--r-- 2 boincer umatlas 410462694 Dec  2 16:09 EVNT.47483658._004563.pool.root.1
[2025-12-02 23:26:23] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 16:09 start_atlas.sh
[2025-12-02 23:26:23] drwxrwx--x 2 boincer umatlas      4096 Dec  2 16:09 shared
[2025-12-02 23:26:23] -rw-r--r-- 2 boincer umatlas    590109 Dec  2 16:09 input.tar.gz
[2025-12-02 23:26:23] -rw-r--r-- 1 boincer umatlas         0 Dec  2 16:09 boinc_lockfile
[2025-12-02 23:26:23] -rw-r--r-- 1 boincer umatlas      2788 Dec  2 16:09 pandaJob.out
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas        57 Dec  2 16:09 setup.sh.local
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas    989224 Dec  2 16:09 agis_schedconf.cvmfs.json
[2025-12-02 23:26:23] drwx------ 5 boincer umatlas      4096 Dec  2 16:09 pilot3
[2025-12-02 23:26:23] -rw-r--r-- 1 boincer umatlas       532 Dec  2 23:17 boinc_task_state.xml
[2025-12-02 23:26:23] -rw-r--r-- 1 boincer umatlas      5955 Dec  2 23:18 init_data.xml
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas 930371565 Dec  2 23:25 HITS.47556185._003265.pool.root.1
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas      1064 Dec  2 23:25 memory_monitor_summary.json
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas        95 Dec  2 23:25 pilot_heartbeat.json
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas   1516240 Dec  2 23:25 agis_ddmendpoints.agis.ALL.json
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas   2182219 Dec  2 23:25 log.47556185._003265.job.log.tgz.1
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas      8661 Dec  2 23:25 heartbeat.json
[2025-12-02 23:26:23] -rw-r--r-- 1 boincer umatlas      8192 Dec  2 23:25 boinc_mmap_file
[2025-12-02 23:26:23] -rw-r--r-- 1 boincer umatlas        29 Dec  2 23:25 wrapper_checkpoint.txt
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas       814 Dec  2 23:26 pilotlog.txt
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas   3669639 Dec  2 23:26 log.47556185._003265.job.log.1
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas       353 Dec  2 23:26 output.list
[2025-12-02 23:26:23] -rw-r--r-- 1 boincer umatlas       620 Dec  2 23:26 runtime_log
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas   5867520 Dec  2 23:26 result.tar.gz
[2025-12-02 23:26:23] -rw-r--r-- 1 boincer umatlas      9340 Dec  2 23:26 runtime_log.err
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas       669 Dec  2 23:26 n2DLDm9vAj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXLLKDmPiQB7n.diag
[2025-12-02 23:26:23] -rw-r--r-- 1 boincer umatlas     21278 Dec  2 23:26 stderr.txt
[2025-12-02 23:26:23] HITS file was successfully produced:
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas 930371565 Dec  2 23:25 shared/HITS.pool.root.1
[2025-12-02 23:26:23]  *** Contents of shared directory: ***
[2025-12-02 23:26:23] total 1315744
[2025-12-02 23:26:23] -rw-r--r-- 2 boincer umatlas 410462694 Dec  2 16:09 ATLAS.root_0
[2025-12-02 23:26:23] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 16:09 start_atlas.sh
[2025-12-02 23:26:23] -rw-r--r-- 2 boincer umatlas    590109 Dec  2 16:09 input.tar.gz
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas 930371565 Dec  2 23:25 HITS.pool.root.1
[2025-12-02 23:26:23] -rw------- 1 boincer umatlas   5867520 Dec  2 23:26 result.tar.gz
23:26:24 (3385): run_atlas exited; CPU time 294679.736524
23:26:24 (3385): called boinc_finish(0)

</stderr_txt>
]]>

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