Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
23:48:45 (1489095): wrapper (7.7.26015): starting
23:48:45 (1489095): wrapper: running run_atlas (--nthreads 10)
[2025-12-06 23:48:45] Arguments: --nthreads 10
[2025-12-06 23:48:45] Threads: 10
[2025-12-06 23:48:45] Checking for CVMFS
[2025-12-06 23:48:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-06 23:48:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-06 23:48:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-06 23:48:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-06 23:48:45] 2.13.3.0 11319 1004 62756 153720 0 110 3910809 4096001 12786 130560 0 135889867 100.000 35892 650 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-06 23:48:45] CVMFS is ok
[2025-12-06 23:48:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-06 23:48:45] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-06 23:48:45] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-06 23:48:45] Further information can be found at the LHC@home message board.
[2025-12-06 23:48:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-06 23:48:45] Checking for apptainer binary...
[2025-12-06 23:48:45] apptainer is not installed, using version from CVMFS
[2025-12-06 23:48:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-06 23:48:45] 7950x-linux
[2025-12-06 23:48:45] apptainer works
[2025-12-06 23:48:45] Set ATHENA_PROC_NUMBER=10
[2025-12-06 23:48:45] Set ATHENA_CORE_NUMBER=10
[2025-12-06 23:48:45] Starting ATLAS job with PandaID=6900219935
[2025-12-06 23:48:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc532/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-07 17:00:50]  *** The last 200 lines of the pilot log: ***
[2025-12-07 17:00:50] 2025-12-08 00:59:59,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-07 17:00:50] 2025-12-08 01:00:00,065 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-07 17:00:50] 2025-12-08 01:00:00,067 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4000.0025312499997
[2025-12-07 17:00:50] 2025-12-08 01:00:00,071 | INFO     | using path: /var/lib/multiboinc/boinc532/slots/1/PanDA_Pilot-6900219935/memory_monitor_summary.json (trf name=prmon)
[2025-12-07 17:00:50] 2025-12-08 01:00:00,071 | INFO     | extracted standard info from prmon json
[2025-12-07 17:00:50] 2025-12-08 01:00:00,071 | INFO     | extracted standard memory fields from prmon json
[2025-12-07 17:00:50] 2025-12-08 01:00:00,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-07 17:00:50] 2025-12-08 01:00:00,079 | INFO     | fitting pss+swap vs Time
[2025-12-07 17:00:50] 2025-12-08 01:00:00,080 | INFO     | sum of square deviations: 323289698777.5
[2025-12-07 17:00:50] 2025-12-08 01:00:00,095 | INFO     | sum of deviations: 2337087113317.0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,095 | INFO     | mean x: 1765124666.5
[2025-12-07 17:00:50] 2025-12-08 01:00:00,095 | INFO     | mean y: 3161319.353057199
[2025-12-07 17:00:50] 2025-12-08 01:00:00,095 | INFO     | intersect: -12757066201.271618
[2025-12-07 17:00:50] 2025-12-08 01:00:00,096 | INFO     | chi2: 4.3834834327688075
[2025-12-07 17:00:50] 2025-12-08 01:00:00,096 | INFO     | sum of square deviations: 318530846760.0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,110 | INFO     | sum of deviations: 2615731389084.0005
[2025-12-07 17:00:50] 2025-12-08 01:00:00,110 | INFO     | mean x: 1765124514.0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,111 | INFO     | mean y: 3170240.5470763133
[2025-12-07 17:00:50] 2025-12-08 01:00:00,111 | INFO     | intersect: -14491788862.708097
[2025-12-07 17:00:50] 2025-12-08 01:00:00,112 | INFO     | chi2: 2.313738282950546
[2025-12-07 17:00:50] 2025-12-08 01:00:00,112 | INFO     | current chi2=2.313738282950546 (change=47.21690366948453 %)
[2025-12-07 17:00:50] 2025-12-08 01:00:00,113 | INFO     | sum of square deviations: 313818925855.0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,128 | INFO     | sum of deviations: 2638493012806.5
[2025-12-07 17:00:50] 2025-12-08 01:00:00,128 | INFO     | mean x: 1765124361.5
[2025-12-07 17:00:50] 2025-12-08 01:00:00,128 | INFO     | mean y: 3170974.775896414
[2025-12-07 17:00:50] 2025-12-08 01:00:00,128 | INFO     | intersect: -14837451788.378212
[2025-12-07 17:00:50] 2025-12-08 01:00:00,129 | INFO     | chi2: 2.227316071649456
[2025-12-07 17:00:50] 2025-12-08 01:00:00,129 | INFO     | current chi2=2.227316071649456 (change=3.735176616038078 %)
[2025-12-07 17:00:50] 2025-12-08 01:00:00,129 | INFO     | right removable region: 1003
[2025-12-07 17:00:50] 2025-12-08 01:00:00,129 | INFO     | sum of square deviations: 318530846760.0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,141 | INFO     | sum of deviations: 2067141918962.0002
[2025-12-07 17:00:50] 2025-12-08 01:00:00,141 | INFO     | mean x: 1765124819.0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,141 | INFO     | mean y: 3169956.9435084243
[2025-12-07 17:00:50] 2025-12-08 01:00:00,141 | INFO     | intersect: -11451806986.951374
[2025-12-07 17:00:50] 2025-12-08 01:00:00,142 | INFO     | chi2: 2.5074207251432337
[2025-12-07 17:00:50] 2025-12-08 01:00:00,142 | INFO     | current chi2=2.5074207251432337 (change=42.79844412325216 %)
[2025-12-07 17:00:50] 2025-12-08 01:00:00,142 | INFO     | sum of square deviations: 313818925855.0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,162 | INFO     | sum of deviations: 1975082076212.0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,162 | INFO     | mean x: 1765124971.5
[2025-12-07 17:00:50] 2025-12-08 01:00:00,162 | INFO     | mean y: 3172935.994023904
[2025-12-07 17:00:50] 2025-12-08 01:00:00,162 | INFO     | intersect: -11105993549.059515
[2025-12-07 17:00:50] 2025-12-08 01:00:00,163 | INFO     | chi2: 2.421755561093853
[2025-12-07 17:00:50] 2025-12-08 01:00:00,163 | INFO     | current chi2=2.421755561093853 (change=3.4164655013963525 %)
[2025-12-07 17:00:50] 2025-12-08 01:00:00,163 | INFO     | left removable region: 20
[2025-12-07 17:00:50] 2025-12-08 01:00:00,163 | INFO     | sum of square deviations: 294536097332.0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,174 | INFO     | sum of deviations: 2140823136432.9995
[2025-12-07 17:00:50] 2025-12-08 01:00:00,174 | INFO     | mean x: 1765124941.0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,174 | INFO     | mean y: 3187061.1525940998
[2025-12-07 17:00:50] 2025-12-08 01:00:00,174 | INFO     | intersect: -12826548739.034441
[2025-12-07 17:00:50] 2025-12-08 01:00:00,175 | INFO     | chi2: 0.2069796451088416
[2025-12-07 17:00:50] 2025-12-08 01:00:00,175 | INFO     | current memory leak: 7.27 B/s (using 983 data points, chi2=0.21)
[2025-12-07 17:00:50] 2025-12-08 01:00:00,175 | INFO     | could have reported an average CPU frequency of 3999 MHz (38 samples)
[2025-12-07 17:00:50] 2025-12-08 01:00:00,176 | INFO     | ..............................
[2025-12-07 17:00:50] 2025-12-08 01:00:00,176 | INFO     | . Timing measurements:
[2025-12-07 17:00:50] 2025-12-08 01:00:00,176 | INFO     | . get job = 0 s
[2025-12-07 17:00:50] 2025-12-08 01:00:00,176 | INFO     | . initial setup = 3 s
[2025-12-07 17:00:50] 2025-12-08 01:00:00,176 | INFO     | . payload setup = 7 s
[2025-12-07 17:00:50] 2025-12-08 01:00:00,176 | INFO     | . stage-in = 0 s
[2025-12-07 17:00:50] 2025-12-08 01:00:00,176 | INFO     | . payload execution = 61825 s
[2025-12-07 17:00:50] 2025-12-08 01:00:00,176 | INFO     | . stage-out = 3 s
[2025-12-07 17:00:50] 2025-12-08 01:00:00,176 | INFO     | . log creation = 0 s
[2025-12-07 17:00:50] 2025-12-08 01:00:00,176 | INFO     | ..............................
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | 
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | job summary report
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | --------------------------------------------------
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | PanDA job id: 6900219935
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | task id: 47556185
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | errors: (none)
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | pilot state: finished 
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | transexitcode: 0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | exeerrorcode: 0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | exeerrordiag: 
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | exitcode: 0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | exitmsg: OK
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | cpuconsumptiontime: 135771 s
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | nevents: 1000
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | neventsw: 0
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | pid: 1501777
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | pgrp: 1501777
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | corecount: 10
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | event service: False
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | sizes: {0: 2284097, 1: 2284352, 7: 2284614, 12: 2284642, 61832: 2337792, 61833: 2337791, 61836: 2347053, 61843: 2347243}
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | --------------------------------------------------
[2025-12-07 17:00:50] 2025-12-08 01:00:00,233 | INFO     | 
[2025-12-07 17:00:50] 2025-12-08 01:00:00,234 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc532/slots/1
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-07 17:00:50] 2025-12-08 01:00:00,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,254 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-07 17:00:50] 2025-12-08 01:00:00,254 | INFO     | job 6900219935 has completed (purged errors)
[2025-12-07 17:00:50] 2025-12-08 01:00:00,254 | INFO     | overall cleanup function is called
[2025-12-07 17:00:50] 2025-12-08 01:00:01,274 | INFO     | --- collectZombieJob: --- 10, [1501777]
[2025-12-07 17:00:50] 2025-12-08 01:00:01,274 | INFO     | zombie collector waiting for pid 1501777
[2025-12-07 17:00:50] 2025-12-08 01:00:01,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-07 17:00:50] 2025-12-08 01:00:01,274 | INFO     | collected zombie processes
[2025-12-07 17:00:50] 2025-12-08 01:00:01,274 | INFO     | will attempt to kill all subprocesses of pid=1501777
[2025-12-07 17:00:50] 2025-12-08 01:00:01,605 | INFO     | process IDs to be killed: [1501777] (in reverse order)
[2025-12-07 17:00:50] 2025-12-08 01:00:01,745 | WARNING  | found no corresponding commands to process id(s)
[2025-12-07 17:00:50] 2025-12-08 01:00:01,746 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-07 17:00:50] 2025-12-08 01:00:01,754 | INFO     | did not find any defunct processes belonging to 1501777
[2025-12-07 17:00:50] 2025-12-08 01:00:01,759 | INFO     | did not find any defunct processes belonging to 1501777
[2025-12-07 17:00:50] 2025-12-08 01:00:01,760 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-07 17:00:50] 2025-12-08 01:00:01,760 | INFO     | ready for new job
[2025-12-07 17:00:50] 2025-12-08 01:00:01,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-07 17:00:50] 2025-12-08 01:00:01,763 | INFO     | ***************************************
[2025-12-07 17:00:50] 2025-12-08 01:00:01,763 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-07 17:00:50] 2025-12-08 01:00:01,763 | INFO     | ***************************************
[2025-12-07 17:00:50] 2025-12-08 01:00:01,763 | INFO     | 
[2025-12-07 17:00:50] 2025-12-08 01:00:01,764 | INFO     | architecture information:
[2025-12-07 17:00:50] 2025-12-08 01:00:01,764 | INFO     | executing command: cat /etc/os-release
[2025-12-07 17:00:50] 2025-12-08 01:00:01,781 | INFO     | cat /etc/os-release:
[2025-12-07 17:00:50] NAME="CentOS Linux"
[2025-12-07 17:00:50] VERSION="7 (Core)"
[2025-12-07 17:00:50] ID="centos"
[2025-12-07 17:00:50] ID_LIKE="rhel fedora"
[2025-12-07 17:00:50] VERSION_ID="7"
[2025-12-07 17:00:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-07 17:00:50] ANSI_COLOR="0;31"
[2025-12-07 17:00:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-07 17:00:50] HOME_URL="https://www.centos.org/"
[2025-12-07 17:00:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-07 17:00:50] 
[2025-12-07 17:00:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-07 17:00:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-07 17:00:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-07 17:00:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-07 17:00:50] 
[2025-12-07 17:00:50] 2025-12-08 01:00:01,782 | INFO     | ***************************************
[2025-12-07 17:00:50] 2025-12-08 01:00:02,284 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc532/slots/1
[2025-12-07 17:00:50] 2025-12-08 01:00:02,315 | INFO     | sufficient remaining disk space (169547399168 B)
[2025-12-07 17:00:50] 2025-12-08 01:00:02,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-07 17:00:50] 2025-12-08 01:00:02,316 | INFO     | current server update state: UPDATING_FINAL
[2025-12-07 17:00:50] 2025-12-08 01:00:02,316 | INFO     | update_server=False
[2025-12-07 17:00:50] 2025-12-08 01:00:02,316 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-07 17:00:50] 2025-12-08 01:00:02,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-07 17:00:50] 2025-12-08 01:00:02,329 | INFO     | all data control threads have been joined
[2025-12-07 17:00:50] 2025-12-08 01:00:02,471 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-07 17:00:50] 2025-12-08 01:00:02,471 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-07 17:00:50] 2025-12-08 01:00:02,471 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-07 17:00:50] 2025-12-08 01:00:02,471 | INFO     | will abort loop
[2025-12-07 17:00:50] 2025-12-08 01:00:02,730 | INFO     | all payload control threads have been joined
[2025-12-07 17:00:50] 2025-12-08 01:00:03,321 | INFO     | [job] retrieve thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:03,334 | INFO     | [data] control thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:03,370 | INFO     | all job control threads have been joined
[2025-12-07 17:00:50] 2025-12-08 01:00:03,476 | INFO     | [job] job monitor thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:03,735 | INFO     | [payload] control thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:03,836 | INFO     | [job] create_data_payload thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:03,929 | INFO     | [payload] validate_post thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:04,303 | INFO     | [payload] failed_post thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:04,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-07 17:00:50] 2025-12-08 01:00:04,321 | INFO     | [data] copytool_out thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:04,375 | INFO     | [job] control thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:04,428 | INFO     | [payload] execute_payloads thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:04,537 | INFO     | [job] validate thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:04,584 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:04,584 | INFO     | [payload] validate_pre thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:04,726 | INFO     | [data] copytool_in thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:05,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-07 17:00:50] 2025-12-08 01:00:06,248 | INFO     | [job] queue monitor thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:08,323 | INFO     | [data] queue_monitor thread has finished
[2025-12-07 17:00:50] 2025-12-08 01:00:32,576 | INFO     | PID=1494002 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-07 17:00:50] 2025-12-08 01:00:32,576 | INFO     | .. there are 14 such processes running
[2025-12-07 17:00:50] 2025-12-08 01:00:32,576 | INFO     | found 0 job(s) in 20 queues
[2025-12-07 17:00:50] 2025-12-08 01:00:32,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-07 17:00:50] 2025-12-08 01:00:32,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-07 17:00:50] 2025-12-08 01:00:43,588 | INFO     | [monitor] cgroup control has ended
[2025-12-07 17:00:50] 2025-12-08 01:00:44,756 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136202098173760)>', '<ExcThread(monitor, started 136201432446720)>']
[2025-12-07 17:00:50] 2025-12-08 01:00:45,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-07 17:00:50] 2025-12-08 01:00:45,647 | INFO     | [monitor] control thread has ended
[2025-12-07 17:00:50] 2025-12-08 01:00:49,781 | INFO     | all workflow threads have been joined
[2025-12-07 17:00:50] 2025-12-08 01:00:49,781 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-07 17:00:50] 2025-12-08 01:00:49,781 | INFO     | traces error code: 0
[2025-12-07 17:00:50] 2025-12-08 01:00:49,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-07 17:00:50] 2025-12-08 01:00:49,890 [wrapper] ==== pilot stdout END ====
[2025-12-07 17:00:50] 2025-12-08 01:00:49,897 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-07 17:00:50] 2025-12-08 01:00:49,899 [wrapper] pilotpid: 1494002
[2025-12-07 17:00:50] 2025-12-08 01:00:49,901 [wrapper] Pilot exit status: 0
[2025-12-07 17:00:50] 2025-12-08 01:00:49,906 [wrapper] pandaids: 6900219935
[2025-12-07 17:00:50] 2025-12-08 01:00:49,953 [wrapper] cleanup supervisor_pilot 2890608 1494003
[2025-12-07 17:00:50] 2025-12-08 01:00:49,955 [wrapper] Test setup, not cleaning
[2025-12-07 17:00:50] 2025-12-08 01:00:49,957 [wrapper] apfmon messages muted
[2025-12-07 17:00:50] 2025-12-08 01:00:49,959 [wrapper] ==== wrapper stdout END ====
[2025-12-07 17:00:50] 2025-12-08 01:00:49,960 [wrapper] ==== wrapper stderr END ====
[2025-12-07 17:00:50]  *** Error codes and diagnostics ***
[2025-12-07 17:00:50]     "exeErrorCode": 0,
[2025-12-07 17:00:50]     "exeErrorDiag": "",
[2025-12-07 17:00:50]     "pilotErrorCode": 0,
[2025-12-07 17:00:50]     "pilotErrorDiag": "",
[2025-12-07 17:00:50]  *** Listing of results directory ***
[2025-12-07 17:00:50] total 1323984
[2025-12-07 17:00:50] -rw-r--r-- 1 root root    576529 Nov 27 08:16 pilot3.tar.gz
[2025-12-07 17:00:50] -rwx------ 1 4871 1028     36292 Nov 27 08:17 runpilot2-wrapper.sh
[2025-12-07 17:00:50] -rw-r--r-- 1 root root      5112 Nov 27 08:17 queuedata.json
[2025-12-07 17:00:50] -rw-r--r-- 1 root root       100 Dec  6 23:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-07 17:00:50] -rwxr-xr-x 1 root root      7986 Dec  6 23:48 run_atlas
[2025-12-07 17:00:50] -rw-r--r-- 1 root root       105 Dec  6 23:48 job.xml
[2025-12-07 17:00:50] -rw-r--r-- 2 root root 409593936 Dec  6 23:48 EVNT.47483658._004363.pool.root.1
[2025-12-07 17:00:50] -rw-r--r-- 1 root root      9523 Dec  6 23:48 init_data.xml
[2025-12-07 17:00:50] -rw-r--r-- 2 root root     15847 Dec  6 23:48 start_atlas.sh
[2025-12-07 17:00:50] drwxrwx--x 2 root root      4096 Dec  6 23:48 shared
[2025-12-07 17:00:50] -rw-r--r-- 2 root root    590103 Dec  6 23:48 input.tar.gz
[2025-12-07 17:00:50] -rw-r--r-- 1 root root         0 Dec  6 23:48 boinc_lockfile
[2025-12-07 17:00:50] -rw-r--r-- 1 root root      2784 Dec  6 23:48 pandaJob.out
[2025-12-07 17:00:50] -rw------- 1 root root    981435 Dec  6 23:48 agis_schedconf.cvmfs.json
[2025-12-07 17:00:50] drwxr-xr-x 5  320  320      4096 Dec  6 23:49 pilot3
[2025-12-07 17:00:50] -rw-r--r-- 1 root root       533 Dec  7 16:49 boinc_task_state.xml
[2025-12-07 17:00:50] -rw------- 1 root root 919926265 Dec  7 16:59 HITS.47556185._001261.pool.root.1
[2025-12-07 17:00:50] -rw------- 1 root root      1067 Dec  7 16:59 memory_monitor_summary.json
[2025-12-07 17:00:50] -rw------- 1 root root   1516240 Dec  7 16:59 agis_ddmendpoints.agis.ALL.json
[2025-12-07 17:00:50] -rw------- 1 root root   2365525 Dec  7 16:59 log.47556185._001261.job.log.tgz.1
[2025-12-07 17:00:50] -rw------- 1 root root      8597 Dec  7 17:00 heartbeat.json
[2025-12-07 17:00:50] -rw------- 1 root root        95 Dec  7 17:00 pilot_heartbeat.json
[2025-12-07 17:00:50] -rw-r--r-- 1 root root      8192 Dec  7 17:00 boinc_mmap_file
[2025-12-07 17:00:50] -rw-r--r-- 1 root root        29 Dec  7 17:00 wrapper_checkpoint.txt
[2025-12-07 17:00:50] -rw------- 1 root root      5025 Dec  7 17:00 pilotlog.txt
[2025-12-07 17:00:50] -rw------- 1 root root   8799320 Dec  7 17:00 log.47556185._001261.job.log.1
[2025-12-07 17:00:50] -rw------- 1 root root       353 Dec  7 17:00 output.list
[2025-12-07 17:00:50] -rw-r--r-- 1 root root       620 Dec  7 17:00 runtime_log
[2025-12-07 17:00:50] -rw------- 1 root root  11182080 Dec  7 17:00 result.tar.gz
[2025-12-07 17:00:50] -rw-r--r-- 1 root root      9021 Dec  7 17:00 runtime_log.err
[2025-12-07 17:00:50] -rw------- 1 root root       663 Dec  7 17:00 8jrKDmQrti8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJjKKDmTNcR2n.diag
[2025-12-07 17:00:50] -rw-r--r-- 1 root root     21411 Dec  7 17:00 stderr.txt
[2025-12-07 17:00:50] HITS file was successfully produced:
[2025-12-07 17:00:50] -rw------- 1 root root 919926265 Dec  7 16:59 shared/HITS.pool.root.1
[2025-12-07 17:00:50]  *** Contents of shared directory: ***
[2025-12-07 17:00:50] total 1309888
[2025-12-07 17:00:50] -rw-r--r-- 2 root root 409593936 Dec  6 23:48 ATLAS.root_0
[2025-12-07 17:00:50] -rw-r--r-- 2 root root     15847 Dec  6 23:48 start_atlas.sh
[2025-12-07 17:00:50] -rw-r--r-- 2 root root    590103 Dec  6 23:48 input.tar.gz
[2025-12-07 17:00:50] -rw------- 1 root root 919926265 Dec  7 16:59 HITS.pool.root.1
[2025-12-07 17:00:50] -rw------- 1 root root  11182080 Dec  7 17:00 result.tar.gz
17:00:51 (1489095): run_atlas exited; CPU time 136119.252581
17:00:51 (1489095): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN