Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:24:25 (8961): wrapper (7.7.26015): starting
00:24:25 (8961): wrapper: running run_atlas (--nthreads 8)
[2025-12-03 00:24:25] Arguments: --nthreads 8
[2025-12-03 00:24:25] Threads: 8
[2025-12-03 00:24:25] Checking for CVMFS
[2025-12-03 00:24:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 00:24:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 00:24:25] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 00:24:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 00:24:25] 2.11.0.0 5006 74847 100204 153574 3 112 2221078 4096001 4381 130560 2 7245164 99.365 7737120 594 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-12-03 00:24:25] CVMFS is ok
[2025-12-03 00:24:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 00:24:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 00:24:25] Further information can be found at the LHC@home message board.
[2025-12-03 00:24:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 00:24:25] Checking for apptainer binary...
[2025-12-03 00:24:25] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-12-03 00:24:25] apptainer is not installed, using version from CVMFS
[2025-12-03 00:24:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 00:24:26] WARNING: Environment variable TMPDIR already has value [/tmp/job_10945653/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node011
[2025-12-03 00:24:26] apptainer works
[2025-12-03 00:24:26] Set ATHENA_PROC_NUMBER=8
[2025-12-03 00:24:26] Set ATHENA_CORE_NUMBER=8
[2025-12-03 00:24:26] Starting ATLAS job with PandaID=6893858405
[2025-12-03 00:24:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10945653/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 04:53:09]  *** The last 200 lines of the pilot log: ***
[2025-12-03 04:53:09] 2025-12-03 03:52:49,992 | INFO     | time since job start (16098s) is within the limit (172800.0s)
[2025-12-03 04:53:09] 2025-12-03 03:52:50,115 | INFO     | monitor loop #1177: job 0:6893858405 is in state 'finished'
[2025-12-03 04:53:09] 2025-12-03 03:52:50,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 04:53:09] 2025-12-03 03:52:50,133 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 04:53:09] 2025-12-03 03:52:50,137 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2381.193078125
[2025-12-03 04:53:09] 2025-12-03 03:52:50,142 | INFO     | using path: /tmp/job_10945653/atlas/pilot/slots/0/PanDA_Pilot-6893858405/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 04:53:09] 2025-12-03 03:52:50,143 | INFO     | extracted standard info from prmon json
[2025-12-03 04:53:09] 2025-12-03 03:52:50,143 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 04:53:09] 2025-12-03 03:52:50,143 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 04:53:09] 2025-12-03 03:52:50,145 | INFO     | fitting pss+swap vs Time
[2025-12-03 04:53:09] 2025-12-03 03:52:50,145 | INFO     | sum of square deviations: 5705372090.0
[2025-12-03 04:53:09] 2025-12-03 03:52:50,146 | INFO     | sum of deviations: 109676737757.49998
[2025-12-03 04:53:09] 2025-12-03 03:52:50,146 | INFO     | mean x: 1764725910.5
[2025-12-03 04:53:09] 2025-12-03 03:52:50,146 | INFO     | mean y: 2903556.0795454546
[2025-12-03 04:53:09] 2025-12-03 03:52:50,147 | INFO     | intersect: -33921155707.12162
[2025-12-03 04:53:09] 2025-12-03 03:52:50,147 | INFO     | chi2: 2.8835846945272428
[2025-12-03 04:53:09] 2025-12-03 03:52:50,147 | INFO     | sum of square deviations: 5387301010.0
[2025-12-03 04:53:09] 2025-12-03 03:52:50,148 | INFO     | sum of deviations: 158641803605.00015
[2025-12-03 04:53:09] 2025-12-03 03:52:50,148 | INFO     | mean x: 1764725758.0
[2025-12-03 04:53:09] 2025-12-03 03:52:50,148 | INFO     | mean y: 2926872.3243243243
[2025-12-03 04:53:09] 2025-12-03 03:52:50,148 | INFO     | intersect: -51963591537.85098
[2025-12-03 04:53:09] 2025-12-03 03:52:50,148 | INFO     | chi2: 1.463834889766276
[2025-12-03 04:53:09] 2025-12-03 03:52:50,148 | INFO     | current chi2=1.463834889766276 (change=49.235585396728965 %)
[2025-12-03 04:53:09] 2025-12-03 03:52:50,148 | INFO     | sum of square deviations: 5081276667.5
[2025-12-03 04:53:09] 2025-12-03 03:52:50,149 | INFO     | sum of deviations: 152853510707.50006
[2025-12-03 04:53:09] 2025-12-03 03:52:50,149 | INFO     | mean x: 1764725605.5
[2025-12-03 04:53:09] 2025-12-03 03:52:50,149 | INFO     | mean y: 2923989.350393701
[2025-12-03 04:53:09] 2025-12-03 03:52:50,149 | INFO     | intersect: -53083046700.13947
[2025-12-03 04:53:09] 2025-12-03 03:52:50,150 | INFO     | chi2: 1.4623194090504248
[2025-12-03 04:53:09] 2025-12-03 03:52:50,150 | INFO     | current chi2=1.4623194090504248 (change=0.10352811826293132 %)
[2025-12-03 04:53:09] 2025-12-03 03:52:50,150 | INFO     | right removable region: 253
[2025-12-03 04:53:09] 2025-12-03 03:52:50,150 | INFO     | sum of square deviations: 5387301010.0
[2025-12-03 04:53:09] 2025-12-03 03:52:50,151 | INFO     | sum of deviations: 59650984878.000046
[2025-12-03 04:53:09] 2025-12-03 03:52:50,151 | INFO     | mean x: 1764726063.0
[2025-12-03 04:53:09] 2025-12-03 03:52:50,151 | INFO     | mean y: 2927361.8494208492
[2025-12-03 04:53:09] 2025-12-03 03:52:50,151 | INFO     | intersect: -19537032908.131027
[2025-12-03 04:53:09] 2025-12-03 03:52:50,151 | INFO     | chi2: 1.4840100300188614
[2025-12-03 04:53:09] 2025-12-03 03:52:50,151 | INFO     | current chi2=1.4840100300188614 (change=48.535930543834375 %)
[2025-12-03 04:53:09] 2025-12-03 03:52:50,151 | INFO     | sum of square deviations: 5081276667.5
[2025-12-03 04:53:09] 2025-12-03 03:52:50,152 | INFO     | sum of deviations: 47554632448.499985
[2025-12-03 04:53:09] 2025-12-03 03:52:50,152 | INFO     | mean x: 1764726215.5
[2025-12-03 04:53:09] 2025-12-03 03:52:50,152 | INFO     | mean y: 2933382.657480315
[2025-12-03 04:53:09] 2025-12-03 03:52:50,152 | INFO     | intersect: -16512779506.407495
[2025-12-03 04:53:09] 2025-12-03 03:52:50,152 | INFO     | chi2: 1.459289973267189
[2025-12-03 04:53:09] 2025-12-03 03:52:50,152 | INFO     | current chi2=1.459289973267189 (change=1.6657607598082314 %)
[2025-12-03 04:53:09] 2025-12-03 03:52:50,152 | INFO     | left removable region: 20
[2025-12-03 04:53:09] 2025-12-03 03:52:50,153 | INFO     | sum of square deviations: 3922276332.0
[2025-12-03 04:53:09] 2025-12-03 03:52:50,153 | INFO     | sum of deviations: 72697915099.99998
[2025-12-03 04:53:09] 2025-12-03 03:52:50,153 | INFO     | mean x: 1764726185.0
[2025-12-03 04:53:09] 2025-12-03 03:52:50,153 | INFO     | mean y: 2965772.2746781115
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | intersect: -32705569657.828434
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | chi2: 0.014014151890727857
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | current memory leak: 18.53 B/s (using 233 data points, chi2=0.01)
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | could have reported an average CPU frequency of 3009 MHz (12 samples)
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | ..............................
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | . Timing measurements:
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | . get job = 0 s
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | . initial setup = 1 s
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | . payload setup = 2 s
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | . stage-in = 0 s
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | . payload execution = 16073 s
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | . stage-out = 1 s
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | . log creation = 0 s
[2025-12-03 04:53:09] 2025-12-03 03:52:50,154 | INFO     | ..............................
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | 
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | job summary report
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | --------------------------------------------------
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | PanDA job id: 6893858405
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | task id: 47523449
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | errors: (none)
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | pilot state: finished 
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | transexitcode: 0
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | exeerrorcode: 0
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | exeerrordiag: 
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | exitcode: 0
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | exitmsg: OK
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | cpuconsumptiontime: 121614 s
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | nevents: 1000
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | neventsw: 0
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | pid: 23780
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | pgrp: 23780
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | corecount: 8
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | event service: False
[2025-12-03 04:53:09] 2025-12-03 03:52:50,203 | INFO     | sizes: {0: 2284435, 2: 2284697, 11: 2284725, 16079: 2317055, 16080: 2326079, 16082: 2326135, 16086: 2326509}
[2025-12-03 04:53:09] 2025-12-03 03:52:50,204 | INFO     | --------------------------------------------------
[2025-12-03 04:53:09] 2025-12-03 03:52:50,204 | INFO     | 
[2025-12-03 04:53:09] 2025-12-03 03:52:50,204 | INFO     | executing command: ls -lF /tmp/job_10945653/atlas/pilot/slots/0
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,213 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 04:53:09] 2025-12-03 03:52:50,214 | INFO     | job 6893858405 has completed (purged errors)
[2025-12-03 04:53:09] 2025-12-03 03:52:50,214 | INFO     | overall cleanup function is called
[2025-12-03 04:53:09] 2025-12-03 03:52:51,221 | INFO     | --- collectZombieJob: --- 10, [23780]
[2025-12-03 04:53:09] 2025-12-03 03:52:51,221 | INFO     | zombie collector waiting for pid 23780
[2025-12-03 04:53:09] 2025-12-03 03:52:51,221 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 04:53:09] 2025-12-03 03:52:51,221 | INFO     | collected zombie processes
[2025-12-03 04:53:09] 2025-12-03 03:52:51,221 | INFO     | will attempt to kill all subprocesses of pid=23780
[2025-12-03 04:53:09] 2025-12-03 03:52:51,311 | INFO     | process IDs to be killed: [23780] (in reverse order)
[2025-12-03 04:53:09] 2025-12-03 03:52:51,342 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 04:53:09] 2025-12-03 03:52:51,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 04:53:09] 2025-12-03 03:52:51,345 | INFO     | did not find any defunct processes belonging to 23780
[2025-12-03 04:53:09] 2025-12-03 03:52:51,348 | INFO     | did not find any defunct processes belonging to 23780
[2025-12-03 04:53:09] 2025-12-03 03:52:51,349 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 04:53:09] 2025-12-03 03:52:51,349 | INFO     | ready for new job
[2025-12-03 04:53:09] 2025-12-03 03:52:51,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 04:53:09] 2025-12-03 03:52:51,350 | INFO     | ***************************************
[2025-12-03 04:53:09] 2025-12-03 03:52:51,350 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 04:53:09] 2025-12-03 03:52:51,350 | INFO     | ***************************************
[2025-12-03 04:53:09] 2025-12-03 03:52:51,350 | INFO     | 
[2025-12-03 04:53:09] 2025-12-03 03:52:51,365 | INFO     | architecture information:
[2025-12-03 04:53:09] 2025-12-03 03:52:51,365 | INFO     | executing command: cat /etc/os-release
[2025-12-03 04:53:09] 2025-12-03 03:52:51,371 | INFO     | cat /etc/os-release:
[2025-12-03 04:53:09] NAME="CentOS Linux"
[2025-12-03 04:53:09] VERSION="7 (Core)"
[2025-12-03 04:53:09] ID="centos"
[2025-12-03 04:53:09] ID_LIKE="rhel fedora"
[2025-12-03 04:53:09] VERSION_ID="7"
[2025-12-03 04:53:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 04:53:09] ANSI_COLOR="0;31"
[2025-12-03 04:53:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 04:53:09] HOME_URL="https://www.centos.org/"
[2025-12-03 04:53:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 04:53:09] 
[2025-12-03 04:53:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 04:53:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 04:53:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 04:53:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 04:53:09] 
[2025-12-03 04:53:09] 2025-12-03 03:52:51,371 | INFO     | ***************************************
[2025-12-03 04:53:09] 2025-12-03 03:52:51,873 | INFO     | executing command: df -mP /tmp/job_10945653/atlas/pilot/slots/0
[2025-12-03 04:53:09] 2025-12-03 03:52:51,879 | INFO     | sufficient remaining disk space (224685719552 B)
[2025-12-03 04:53:09] 2025-12-03 03:52:51,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 04:53:09] 2025-12-03 03:52:51,880 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 04:53:09] 2025-12-03 03:52:51,880 | INFO     | update_server=False
[2025-12-03 04:53:09] 2025-12-03 03:52:51,880 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 04:53:09] 2025-12-03 03:52:51,880 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-03 04:53:09] 2025-12-03 03:52:51,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 04:53:09] 2025-12-03 03:52:51,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 04:53:09] 2025-12-03 03:52:51,880 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 04:53:09] 2025-12-03 03:52:51,880 | INFO     | aborting loop
[2025-12-03 04:53:09] 2025-12-03 03:52:51,880 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 04:53:09] 2025-12-03 03:52:51,880 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 04:53:09] 2025-12-03 03:52:51,887 | INFO     | all payload control threads have been joined
[2025-12-03 04:53:09] 2025-12-03 03:52:52,034 | INFO     | all job control threads have been joined
[2025-12-03 04:53:09] 2025-12-03 03:52:52,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 04:53:09] 2025-12-03 03:52:52,556 | INFO     | all data control threads have been joined
[2025-12-03 04:53:09] 2025-12-03 03:52:52,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 04:53:09] 2025-12-03 03:52:52,885 | INFO     | [job] retrieve thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:52,885 | INFO     | [job] job monitor thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:52,885 | INFO     | [job] queue monitor thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:52,893 | INFO     | [payload] control thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:53,039 | INFO     | [job] control thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:53,081 | INFO     | [job] validate thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:53,170 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:53,473 | INFO     | [payload] validate_post thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:53,562 | INFO     | [data] control thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:53,972 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:54,234 | INFO     | [data] copytool_in thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:54,235 | INFO     | [data] copytool_out thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:54,282 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:54,406 | INFO     | [payload] failed_post thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:56,595 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:52:57,677 | INFO     | [monitor] cgroup control has ended
[2025-12-03 04:53:09] 2025-12-03 03:53:02,220 | INFO     | job.realtimelogging is not enabled
[2025-12-03 04:53:09] 2025-12-03 03:53:03,225 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 04:53:09] 2025-12-03 03:53:04,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2025-12-03 04:53:09] 2025-12-03 03:53:04,945 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 04:53:09] 2025-12-03 03:53:04,945 | INFO     | [monitor] control thread has ended
[2025-12-03 04:53:09] 2025-12-03 03:53:09,659 | INFO     | all workflow threads have been joined
[2025-12-03 04:53:09] 2025-12-03 03:53:09,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 04:53:09] 2025-12-03 03:53:09,659 | INFO     | traces error code: 0
[2025-12-03 04:53:09] 2025-12-03 03:53:09,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 04:53:09] 2025-12-03 03:53:09,715 [wrapper] ==== pilot stdout END ====
[2025-12-03 04:53:09] 2025-12-03 03:53:09,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 04:53:09] 2025-12-03 03:53:09,718 [wrapper] pilotpid: 17126
[2025-12-03 04:53:09] 2025-12-03 03:53:09,719 [wrapper] Pilot exit status: 0
[2025-12-03 04:53:09] 2025-12-03 03:53:09,722 [wrapper] pandaids: 6893858405
[2025-12-03 04:53:09] 2025-12-03 03:53:09,742 [wrapper] cleanup supervisor_pilot 10082 17127
[2025-12-03 04:53:09] 2025-12-03 03:53:09,743 [wrapper] Test setup, not cleaning
[2025-12-03 04:53:09] 2025-12-03 03:53:09,745 [wrapper] apfmon messages muted
[2025-12-03 04:53:09] 2025-12-03 03:53:09,746 [wrapper] ==== wrapper stdout END ====
[2025-12-03 04:53:09] 2025-12-03 03:53:09,747 [wrapper] ==== wrapper stderr END ====
[2025-12-03 04:53:09]  *** Error codes and diagnostics ***
[2025-12-03 04:53:09]     "exeErrorCode": 0,
[2025-12-03 04:53:09]     "exeErrorDiag": "",
[2025-12-03 04:53:09]     "pilotErrorCode": 0,
[2025-12-03 04:53:09]     "pilotErrorDiag": "",
[2025-12-03 04:53:09]  *** Listing of results directory ***
[2025-12-03 04:53:09] total 1326052
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user    576529 Nov 20 14:12 pilot3.tar.gz
[2025-12-03 04:53:09] -rwx------ 1 mf493845 unix-user     36292 Nov 20 14:19 runpilot2-wrapper.sh
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user      5112 Nov 20 14:19 queuedata.json
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user       100 Dec  2 22:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 04:53:09] -rwxr-xr-x 1 mf493845 unix-user      7986 Dec  2 22:39 run_atlas
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user       105 Dec  2 22:39 job.xml
[2025-12-03 04:53:09] -rw-r--r-- 2 mf493845 unix-user     15847 Dec  3 00:24 start_atlas.sh
[2025-12-03 04:53:09] drwxrwx--x 2 mf493845 unix-user       100 Dec  3 00:24 shared
[2025-12-03 04:53:09] -rw-r--r-- 2 mf493845 unix-user    590096 Dec  3 00:24 input.tar.gz
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user      6391 Dec  3 00:24 init_data.xml
[2025-12-03 04:53:09] -rw-r--r-- 2 mf493845 unix-user 411419789 Dec  3 00:24 EVNT.47493127._000512.pool.root.1
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user         0 Dec  3 00:24 boinc_setup_complete
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user      8192 Dec  3 00:24 boinc_mmap_file
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user         0 Dec  3 00:24 boinc_lockfile
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user      2783 Dec  3 00:24 pandaJob.out
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user    989284 Dec  3 00:24 agis_schedconf.cvmfs.json
[2025-12-03 04:53:09] drwx------ 5 mf493845 unix-user       440 Dec  3 00:24 pilot3
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user 934786388 Dec  3 04:52 HITS.47523449._005111.pool.root.1
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user        95 Dec  3 04:52 pilot_heartbeat.json
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user      1029 Dec  3 04:52 memory_monitor_summary.json
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user   1516240 Dec  3 04:52 agis_ddmendpoints.agis.ALL.json
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user   1557276 Dec  3 04:52 log.47523449._005111.job.log.tgz.1
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user      8564 Dec  3 04:52 heartbeat.json
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user      4638 Dec  3 04:53 pilotlog.txt
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user   2331244 Dec  3 04:53 log.47523449._005111.job.log.1
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user       353 Dec  3 04:53 output.list
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user       620 Dec  3 04:53 runtime_log
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user   3911680 Dec  3 04:53 result.tar.gz
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user      9221 Dec  3 04:53 runtime_log.err
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user       649 Dec  3 04:53 pIENDmIkJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmuHKDmR4Qu2n.diag
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user     21642 Dec  3 04:53 stderr.txt
[2025-12-03 04:53:09] HITS file was successfully produced:
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user 934786388 Dec  3 04:52 shared/HITS.pool.root.1
[2025-12-03 04:53:09]  *** Contents of shared directory: ***
[2025-12-03 04:53:09] total 1319076
[2025-12-03 04:53:09] -rw-r--r-- 2 mf493845 unix-user     15847 Dec  3 00:24 start_atlas.sh
[2025-12-03 04:53:09] -rw-r--r-- 2 mf493845 unix-user    590096 Dec  3 00:24 input.tar.gz
[2025-12-03 04:53:09] -rw-r--r-- 2 mf493845 unix-user 411419789 Dec  3 00:24 ATLAS.root_0
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user 934786388 Dec  3 04:52 HITS.pool.root.1
[2025-12-03 04:53:09] -rw------- 1 mf493845 unix-user   3911680 Dec  3 04:53 result.tar.gz
04:53:11 (8961): run_atlas exited; CPU time 121805.547602
04:53:11 (8961): called boinc_finish(0)

</stderr_txt>
]]>

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