Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:24:13 (24943): wrapper (7.7.26015): starting
00:24:13 (24943): wrapper: running run_atlas (--nthreads 8)
[2025-12-03 00:24:13] Arguments: --nthreads 8
[2025-12-03 00:24:13] Threads: 8
[2025-12-03 00:24:13] Checking for CVMFS
[2025-12-03 00:24:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 00:24:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 00:24:13] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 00:24:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 00:24:13] 2.11.0.0 4264 74587 118316 153574 2 111 3279852 4096000 5225 130560 1 12372347 99.687 7298526 634 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-12-03 00:24:13] CVMFS is ok
[2025-12-03 00:24:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 00:24:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 00:24:13] Further information can be found at the LHC@home message board.
[2025-12-03 00:24:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 00:24:13] Checking for apptainer binary...
[2025-12-03 00:24:13] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-12-03 00:24:13] apptainer is not installed, using version from CVMFS
[2025-12-03 00:24:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 00:24:14] WARNING: Environment variable TMPDIR already has value [/tmp/job_10945674/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node032
[2025-12-03 00:24:14] apptainer works
[2025-12-03 00:24:14] Set ATHENA_PROC_NUMBER=8
[2025-12-03 00:24:14] Set ATHENA_CORE_NUMBER=8
[2025-12-03 00:24:14] Starting ATLAS job with PandaID=6894290835
[2025-12-03 00:24:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10945674/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 04:49:52]  *** The last 200 lines of the pilot log: ***
[2025-12-03 04:49:52] 2025-12-03 03:49:31,022 | INFO     | executing command: lscpu
[2025-12-03 04:49:52] 2025-12-03 03:49:31,055 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-03 04:49:52] 2025-12-03 03:49:32,817 | INFO     | time since job start (15914s) is within the limit (172800.0s)
[2025-12-03 04:49:52] 2025-12-03 03:49:32,871 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 04:49:52] 2025-12-03 03:49:32,875 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2490.313078125
[2025-12-03 04:49:52] 2025-12-03 03:49:32,881 | INFO     | using path: /tmp/job_10945674/atlas/pilot/slots/0/PanDA_Pilot-6894290835/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 04:49:52] 2025-12-03 03:49:32,881 | INFO     | extracted standard info from prmon json
[2025-12-03 04:49:52] 2025-12-03 03:49:32,881 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 04:49:52] 2025-12-03 03:49:32,881 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 04:49:52] 2025-12-03 03:49:32,884 | INFO     | fitting pss+swap vs Time
[2025-12-03 04:49:52] 2025-12-03 03:49:32,884 | INFO     | sum of square deviations: 5513070810.0
[2025-12-03 04:49:52] 2025-12-03 03:49:32,885 | INFO     | sum of deviations: 95733129586.99992
[2025-12-03 04:49:52] 2025-12-03 03:49:32,885 | INFO     | mean x: 1764725806.0
[2025-12-03 04:49:52] 2025-12-03 03:49:32,885 | INFO     | mean y: 2900093.318007663
[2025-12-03 04:49:52] 2025-12-03 03:49:32,885 | INFO     | intersect: -30641132986.19197
[2025-12-03 04:49:52] 2025-12-03 03:49:32,885 | INFO     | chi2: 2.7687873841978994
[2025-12-03 04:49:52] 2025-12-03 03:49:32,885 | INFO     | sum of square deviations: 5202255680.0
[2025-12-03 04:49:52] 2025-12-03 03:49:32,886 | INFO     | sum of deviations: 141936448921.5
[2025-12-03 04:49:52] 2025-12-03 03:49:32,886 | INFO     | mean x: 1764725653.5
[2025-12-03 04:49:52] 2025-12-03 03:49:32,886 | INFO     | mean y: 2922586.77734375
[2025-12-03 04:49:52] 2025-12-03 03:49:32,886 | INFO     | intersect: -48145209297.90224
[2025-12-03 04:49:52] 2025-12-03 03:49:32,887 | INFO     | chi2: 1.4094106786828486
[2025-12-03 04:49:52] 2025-12-03 03:49:32,887 | INFO     | current chi2=1.4094106786828486 (change=49.09646415153881 %)
[2025-12-03 04:49:52] 2025-12-03 03:49:32,887 | INFO     | sum of square deviations: 4903347750.0
[2025-12-03 04:49:52] 2025-12-03 03:49:32,888 | INFO     | sum of deviations: 136469533609.0
[2025-12-03 04:49:52] 2025-12-03 03:49:32,888 | INFO     | mean x: 1764725501.0
[2025-12-03 04:49:52] 2025-12-03 03:49:32,888 | INFO     | mean y: 2919797.426294821
[2025-12-03 04:49:52] 2025-12-03 03:49:32,888 | INFO     | intersect: -49112761640.705215
[2025-12-03 04:49:52] 2025-12-03 03:49:32,888 | INFO     | chi2: 1.408804101719332
[2025-12-03 04:49:52] 2025-12-03 03:49:32,888 | INFO     | current chi2=1.408804101719332 (change=0.04303763074106235 %)
[2025-12-03 04:49:52] 2025-12-03 03:49:32,888 | INFO     | right removable region: 250
[2025-12-03 04:49:52] 2025-12-03 03:49:32,888 | INFO     | sum of square deviations: 5202255680.0
[2025-12-03 04:49:52] 2025-12-03 03:49:32,889 | INFO     | sum of deviations: 48191906860.0
[2025-12-03 04:49:52] 2025-12-03 03:49:32,889 | INFO     | mean x: 1764725958.5
[2025-12-03 04:49:52] 2025-12-03 03:49:32,889 | INFO     | mean y: 2923232.9453125
[2025-12-03 04:49:52] 2025-12-03 03:49:32,889 | INFO     | intersect: -16344890918.599087
[2025-12-03 04:49:52] 2025-12-03 03:49:32,889 | INFO     | chi2: 1.403305077280385
[2025-12-03 04:49:52] 2025-12-03 03:49:32,889 | INFO     | current chi2=1.403305077280385 (change=49.3169795091755 %)
[2025-12-03 04:49:52] 2025-12-03 03:49:32,890 | INFO     | sum of square deviations: 4903347750.0
[2025-12-03 04:49:52] 2025-12-03 03:49:32,891 | INFO     | sum of deviations: 37951133896.0001
[2025-12-03 04:49:52] 2025-12-03 03:49:32,891 | INFO     | mean x: 1764726111.0
[2025-12-03 04:49:52] 2025-12-03 03:49:32,891 | INFO     | mean y: 2928453.565737052
[2025-12-03 04:49:52] 2025-12-03 03:49:32,891 | INFO     | intersect: -13655771753.517992
[2025-12-03 04:49:52] 2025-12-03 03:49:32,891 | INFO     | chi2: 1.386000223465767
[2025-12-03 04:49:52] 2025-12-03 03:49:32,891 | INFO     | current chi2=1.386000223465767 (change=1.2331498043287232 %)
[2025-12-03 04:49:52] 2025-12-03 03:49:32,891 | INFO     | left removable region: 20
[2025-12-03 04:49:52] 2025-12-03 03:49:32,891 | INFO     | sum of square deviations: 3772712597.5
[2025-12-03 04:49:52] 2025-12-03 03:49:32,892 | INFO     | sum of deviations: 64580658947.0
[2025-12-03 04:49:52] 2025-12-03 03:49:32,892 | INFO     | mean x: 1764726080.5
[2025-12-03 04:49:52] 2025-12-03 03:49:32,892 | INFO     | mean y: 2957970.8173913043
[2025-12-03 04:49:52] 2025-12-03 03:49:32,892 | INFO     | intersect: -30205325908.31172
[2025-12-03 04:49:52] 2025-12-03 03:49:32,892 | INFO     | chi2: 0.006388188903336703
[2025-12-03 04:49:52] 2025-12-03 03:49:32,892 | INFO     | current memory leak: 17.12 B/s (using 230 data points, chi2=0.01)
[2025-12-03 04:49:52] 2025-12-03 03:49:32,892 | INFO     | could have reported an average CPU frequency of 3014 MHz (12 samples)
[2025-12-03 04:49:52] 2025-12-03 03:49:32,892 | INFO     | ..............................
[2025-12-03 04:49:52] 2025-12-03 03:49:32,892 | INFO     | . Timing measurements:
[2025-12-03 04:49:52] 2025-12-03 03:49:32,893 | INFO     | . get job = 0 s
[2025-12-03 04:49:52] 2025-12-03 03:49:32,893 | INFO     | . initial setup = 1 s
[2025-12-03 04:49:52] 2025-12-03 03:49:32,893 | INFO     | . payload setup = 2 s
[2025-12-03 04:49:52] 2025-12-03 03:49:32,893 | INFO     | . stage-in = 0 s
[2025-12-03 04:49:52] 2025-12-03 03:49:32,893 | INFO     | . payload execution = 15890 s
[2025-12-03 04:49:52] 2025-12-03 03:49:32,893 | INFO     | . stage-out = 1 s
[2025-12-03 04:49:52] 2025-12-03 03:49:32,893 | INFO     | . log creation = 0 s
[2025-12-03 04:49:52] 2025-12-03 03:49:32,893 | INFO     | ..............................
[2025-12-03 04:49:52] 2025-12-03 03:49:33,106 | INFO     | 
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | job summary report
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | --------------------------------------------------
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | PanDA job id: 6894290835
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | task id: 47533967
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | errors: (none)
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | pilot state: finished 
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | transexitcode: 0
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | exeerrorcode: 0
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | exeerrordiag: 
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | exitcode: 0
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | exitmsg: OK
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | cpuconsumptiontime: 120110 s
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | nevents: 1000
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | neventsw: 0
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | pid: 3387
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | pgrp: 3387
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | corecount: 8
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | event service: False
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | sizes: {0: 2284389, 2: 2284651, 11: 2284679, 15895: 2316956, 15896: 2316955, 15897: 2326219, 15901: 2326409}
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | --------------------------------------------------
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | 
[2025-12-03 04:49:52] 2025-12-03 03:49:33,107 | INFO     | executing command: ls -lF /tmp/job_10945674/atlas/pilot/slots/0
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,118 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 04:49:52] 2025-12-03 03:49:33,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,118 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 04:49:52] 2025-12-03 03:49:33,118 | INFO     | job 6894290835 has completed (purged errors)
[2025-12-03 04:49:52] 2025-12-03 03:49:33,118 | INFO     | overall cleanup function is called
[2025-12-03 04:49:52] 2025-12-03 03:49:34,125 | INFO     | --- collectZombieJob: --- 10, [3387]
[2025-12-03 04:49:52] 2025-12-03 03:49:34,125 | INFO     | zombie collector waiting for pid 3387
[2025-12-03 04:49:52] 2025-12-03 03:49:34,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 04:49:52] 2025-12-03 03:49:34,125 | INFO     | collected zombie processes
[2025-12-03 04:49:52] 2025-12-03 03:49:34,125 | INFO     | will attempt to kill all subprocesses of pid=3387
[2025-12-03 04:49:52] 2025-12-03 03:49:34,226 | INFO     | process IDs to be killed: [3387] (in reverse order)
[2025-12-03 04:49:52] 2025-12-03 03:49:34,262 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 04:49:52] 2025-12-03 03:49:34,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 04:49:52] 2025-12-03 03:49:34,265 | INFO     | did not find any defunct processes belonging to 3387
[2025-12-03 04:49:52] 2025-12-03 03:49:34,268 | INFO     | did not find any defunct processes belonging to 3387
[2025-12-03 04:49:52] 2025-12-03 03:49:34,269 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 04:49:52] 2025-12-03 03:49:34,269 | INFO     | ready for new job
[2025-12-03 04:49:52] 2025-12-03 03:49:34,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 04:49:52] 2025-12-03 03:49:34,270 | INFO     | ***************************************
[2025-12-03 04:49:52] 2025-12-03 03:49:34,270 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 04:49:52] 2025-12-03 03:49:34,270 | INFO     | ***************************************
[2025-12-03 04:49:52] 2025-12-03 03:49:34,270 | INFO     | 
[2025-12-03 04:49:52] 2025-12-03 03:49:34,284 | INFO     | architecture information:
[2025-12-03 04:49:52] 2025-12-03 03:49:34,285 | INFO     | executing command: cat /etc/os-release
[2025-12-03 04:49:52] 2025-12-03 03:49:34,291 | INFO     | cat /etc/os-release:
[2025-12-03 04:49:52] NAME="CentOS Linux"
[2025-12-03 04:49:52] VERSION="7 (Core)"
[2025-12-03 04:49:52] ID="centos"
[2025-12-03 04:49:52] ID_LIKE="rhel fedora"
[2025-12-03 04:49:52] VERSION_ID="7"
[2025-12-03 04:49:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 04:49:52] ANSI_COLOR="0;31"
[2025-12-03 04:49:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 04:49:52] HOME_URL="https://www.centos.org/"
[2025-12-03 04:49:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 04:49:52] 
[2025-12-03 04:49:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 04:49:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 04:49:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 04:49:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 04:49:52] 
[2025-12-03 04:49:52] 2025-12-03 03:49:34,291 | INFO     | ***************************************
[2025-12-03 04:49:52] 2025-12-03 03:49:34,794 | INFO     | executing command: df -mP /tmp/job_10945674/atlas/pilot/slots/0
[2025-12-03 04:49:52] 2025-12-03 03:49:34,800 | INFO     | sufficient remaining disk space (223578423296 B)
[2025-12-03 04:49:52] 2025-12-03 03:49:34,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 04:49:52] 2025-12-03 03:49:34,800 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 04:49:52] 2025-12-03 03:49:34,800 | INFO     | update_server=False
[2025-12-03 04:49:52] 2025-12-03 03:49:34,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 04:49:52] 2025-12-03 03:49:34,800 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-03 04:49:52] 2025-12-03 03:49:34,801 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 04:49:52] 2025-12-03 03:49:34,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 04:49:52] 2025-12-03 03:49:34,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 04:49:52] 2025-12-03 03:49:34,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 04:49:52] 2025-12-03 03:49:34,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 04:49:52] 2025-12-03 03:49:34,801 | INFO     | aborting loop
[2025-12-03 04:49:52] 2025-12-03 03:49:34,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 04:49:52] 2025-12-03 03:49:35,059 | INFO     | all payload control threads have been joined
[2025-12-03 04:49:52] 2025-12-03 03:49:35,100 | INFO     | all job control threads have been joined
[2025-12-03 04:49:52] 2025-12-03 03:49:35,241 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 04:49:52] 2025-12-03 03:49:35,760 | INFO     | all data control threads have been joined
[2025-12-03 04:49:52] 2025-12-03 03:49:35,805 | INFO     | [job] retrieve thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:35,806 | INFO     | [job] queue monitor thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:35,806 | INFO     | [job] job monitor thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:36,064 | INFO     | [payload] control thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:36,105 | INFO     | [job] control thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:36,566 | INFO     | [data] copytool_in thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:36,623 | INFO     | [payload] failed_post thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:36,755 | INFO     | [job] validate thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:36,764 | INFO     | [data] control thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:36,806 | INFO     | [data] copytool_out thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:36,918 | INFO     | [payload] validate_post thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:37,221 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:37,231 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:37,299 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:39,246 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:44,733 | INFO     | [monitor] cgroup control has ended
[2025-12-03 04:49:52] 2025-12-03 03:49:45,115 | INFO     | job.realtimelogging is not enabled
[2025-12-03 04:49:52] 2025-12-03 03:49:46,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 04:49:52] 2025-12-03 03:49:47,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2025-12-03 04:49:52] 2025-12-03 03:49:47,867 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 04:49:52] 2025-12-03 03:49:47,867 | INFO     | [monitor] control thread has ended
[2025-12-03 04:49:52] 2025-12-03 03:49:52,319 | INFO     | all workflow threads have been joined
[2025-12-03 04:49:52] 2025-12-03 03:49:52,319 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 04:49:52] 2025-12-03 03:49:52,319 | INFO     | traces error code: 0
[2025-12-03 04:49:52] 2025-12-03 03:49:52,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 04:49:52] 2025-12-03 03:49:52,372 [wrapper] ==== pilot stdout END ====
[2025-12-03 04:49:52] 2025-12-03 03:49:52,374 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 04:49:52] 2025-12-03 03:49:52,375 [wrapper] pilotpid: 28844
[2025-12-03 04:49:52] 2025-12-03 03:49:52,376 [wrapper] Pilot exit status: 0
[2025-12-03 04:49:52] 2025-12-03 03:49:52,380 [wrapper] pandaids: 6894290835
[2025-12-03 04:49:52] 2025-12-03 03:49:52,405 [wrapper] cleanup supervisor_pilot 21279 28845
[2025-12-03 04:49:52] 2025-12-03 03:49:52,406 [wrapper] Test setup, not cleaning
[2025-12-03 04:49:52] 2025-12-03 03:49:52,407 [wrapper] apfmon messages muted
[2025-12-03 04:49:52] 2025-12-03 03:49:52,408 [wrapper] ==== wrapper stdout END ====
[2025-12-03 04:49:52] 2025-12-03 03:49:52,410 [wrapper] ==== wrapper stderr END ====
[2025-12-03 04:49:52]  *** Error codes and diagnostics ***
[2025-12-03 04:49:52]     "exeErrorCode": 0,
[2025-12-03 04:49:52]     "exeErrorDiag": "",
[2025-12-03 04:49:52]     "pilotErrorCode": 0,
[2025-12-03 04:49:52]     "pilotErrorDiag": "",
[2025-12-03 04:49:52]  *** Listing of results directory ***
[2025-12-03 04:49:52] total 1301644
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user    576529 Nov 21 12:49 pilot3.tar.gz
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user      5112 Nov 21 12:54 queuedata.json
[2025-12-03 04:49:52] -rwx------ 1 mf493845 unix-user     36292 Nov 21 12:56 runpilot2-wrapper.sh
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user       100 Dec  2 22:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 04:49:52] -rwxr-xr-x 1 mf493845 unix-user      7986 Dec  2 22:39 run_atlas
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user       105 Dec  2 22:39 job.xml
[2025-12-03 04:49:52] -rw-r--r-- 2 mf493845 unix-user 411103944 Dec  3 00:24 EVNT.47493127._002433.pool.root.1
[2025-12-03 04:49:52] -rw-r--r-- 2 mf493845 unix-user     15847 Dec  3 00:24 start_atlas.sh
[2025-12-03 04:49:52] drwxrwx--x 2 mf493845 unix-user       100 Dec  3 00:24 shared
[2025-12-03 04:49:52] -rw-r--r-- 2 mf493845 unix-user    590103 Dec  3 00:24 input.tar.gz
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user      6391 Dec  3 00:24 init_data.xml
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user         0 Dec  3 00:24 boinc_setup_complete
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user      8192 Dec  3 00:24 boinc_mmap_file
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user         0 Dec  3 00:24 boinc_lockfile
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user      2784 Dec  3 00:24 pandaJob.out
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user    989284 Dec  3 00:24 agis_schedconf.cvmfs.json
[2025-12-03 04:49:52] drwx------ 5 mf493845 unix-user       440 Dec  3 00:24 pilot3
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user 910175474 Dec  3 04:49 HITS.47533967._004042.pool.root.1
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user        95 Dec  3 04:49 pilot_heartbeat.json
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user      1028 Dec  3 04:49 memory_monitor_summary.json
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user   1516240 Dec  3 04:49 agis_ddmendpoints.agis.ALL.json
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user   1560234 Dec  3 04:49 log.47533967._004042.job.log.tgz.1
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user      8584 Dec  3 04:49 heartbeat.json
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user      4638 Dec  3 04:49 pilotlog.txt
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user   2297357 Dec  3 04:49 log.47533967._004042.job.log.1
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user       353 Dec  3 04:49 output.list
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user       620 Dec  3 04:49 runtime_log
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user   3880960 Dec  3 04:49 result.tar.gz
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user       649 Dec  3 04:49 VDMODmpveg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNOJKDmexcX3n.diag
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user      9221 Dec  3 04:49 runtime_log.err
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user     21655 Dec  3 04:49 stderr.txt
[2025-12-03 04:49:52] HITS file was successfully produced:
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user 910175474 Dec  3 04:49 shared/HITS.pool.root.1
[2025-12-03 04:49:52]  *** Contents of shared directory: ***
[2025-12-03 04:49:52] total 1294704
[2025-12-03 04:49:52] -rw-r--r-- 2 mf493845 unix-user 411103944 Dec  3 00:24 ATLAS.root_0
[2025-12-03 04:49:52] -rw-r--r-- 2 mf493845 unix-user     15847 Dec  3 00:24 start_atlas.sh
[2025-12-03 04:49:52] -rw-r--r-- 2 mf493845 unix-user    590103 Dec  3 00:24 input.tar.gz
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user 910175474 Dec  3 04:49 HITS.pool.root.1
[2025-12-03 04:49:52] -rw------- 1 mf493845 unix-user   3880960 Dec  3 04:49 result.tar.gz
04:49:53 (24943): run_atlas exited; CPU time 120291.414341
04:49:53 (24943): called boinc_finish(0)

</stderr_txt>
]]>

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