Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:49:53 (175859): wrapper (7.7.26015): starting
14:49:53 (175859): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 14:49:53] Arguments: --nthreads 8
[2025-12-02 14:49:53] Threads: 8
[2025-12-02 14:49:53] Checking for CVMFS
[2025-12-02 14:49:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 14:49:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 14:49:54] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 14:49:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 14:49:54] 2.13.3.0 7100 39068 219384 153567 0 520 38647693 40960001 54543 16776704 0 526244132 99.701 373684957 47809 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 14:49:54] CVMFS is ok
[2025-12-02 14:49:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 14:49:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 14:49:54] Further information can be found at the LHC@home message board.
[2025-12-02 14:49:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 14:49:54] Checking for apptainer binary...
[2025-12-02 14:49:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 14:49:54] Running /usr/bin/apptainer --version
[2025-12-02 14:49:54] apptainer version 1.4.4-1.el9
[2025-12-02 14:49:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 14:49:54] c8-6-10.aglt2.org
[2025-12-02 14:49:54] apptainer works
[2025-12-02 14:49:55] Set ATHENA_PROC_NUMBER=8
[2025-12-02 14:49:55] Set ATHENA_CORE_NUMBER=8
[2025-12-02 14:49:55] Starting ATLAS job with PandaID=6905332098
[2025-12-02 14:49:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 01:27:38]  *** The last 200 lines of the pilot log: ***
[2025-12-03 01:27:38] 2025-12-03 06:26:22,907 | INFO     | time since job start (38162s) is within the limit (172800.0s)
[2025-12-03 01:27:38] 2025-12-03 06:26:24,057 | INFO     | monitor loop #2393: job 0:6905332098 is in state 'finished'
[2025-12-03 01:27:38] 2025-12-03 06:26:24,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 01:27:38] 2025-12-03 06:26:24,929 | INFO     | time since job start (38164s) is within the limit (172800.0s)
[2025-12-03 01:27:38] 2025-12-03 06:26:26,564 | INFO     | monitor loop #2394: job 0:6905332098 is in state 'finished'
[2025-12-03 01:27:38] 2025-12-03 06:26:26,564 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 01:27:38] 2025-12-03 06:26:26,936 | INFO     | time since job start (38166s) is within the limit (172800.0s)
[2025-12-03 01:27:38] 2025-12-03 06:26:28,958 | INFO     | time since job start (38168s) is within the limit (172800.0s)
[2025-12-03 01:27:38] 2025-12-03 06:26:29,069 | INFO     | monitor loop #2395: job 0:6905332098 is in state 'finished'
[2025-12-03 01:27:38] 2025-12-03 06:26:29,069 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 01:27:38] 2025-12-03 06:26:30,967 | INFO     | time since job start (38170s) is within the limit (172800.0s)
[2025-12-03 01:27:38] 2025-12-03 06:26:31,574 | INFO     | monitor loop #2396: job 0:6905332098 is in state 'finished'
[2025-12-03 01:27:38] 2025-12-03 06:26:31,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 01:27:38] 2025-12-03 06:26:32,974 | INFO     | time since job start (38172s) is within the limit (172800.0s)
[2025-12-03 01:27:38] 2025-12-03 06:26:34,078 | INFO     | monitor loop #2397: job 0:6905332098 is in state 'finished'
[2025-12-03 01:27:38] 2025-12-03 06:26:34,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 01:27:38] 2025-12-03 06:26:34,491 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-03 01:27:38] 2025-12-03 06:26:34,541 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9924687499993
[2025-12-03 01:27:38] 2025-12-03 06:26:34,625 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6905332098/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 01:27:38] 2025-12-03 06:26:34,625 | INFO     | extracted standard info from prmon json
[2025-12-03 01:27:38] 2025-12-03 06:26:34,626 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 01:27:38] 2025-12-03 06:26:34,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 01:27:38] 2025-12-03 06:26:34,680 | INFO     | fitting pss+swap vs Time
[2025-12-03 01:27:38] 2025-12-03 06:26:34,680 | INFO     | sum of square deviations: 75341518599.37022
[2025-12-03 01:27:38] 2025-12-03 06:26:34,701 | INFO     | sum of deviations: -828219690745.0237
[2025-12-03 01:27:38] 2025-12-03 06:26:34,701 | INFO     | mean x: 1764724091.1105769
[2025-12-03 01:27:38] 2025-12-03 06:26:34,701 | INFO     | mean y: 3243297.2612179485
[2025-12-03 01:27:38] 2025-12-03 06:26:34,701 | INFO     | intersect: 19402629826.246212
[2025-12-03 01:27:38] 2025-12-03 06:26:34,706 | INFO     | chi2: 29.927448850899808
[2025-12-03 01:27:38] 2025-12-03 06:26:34,706 | INFO     | sum of square deviations: 73545214681.29565
[2025-12-03 01:27:38] 2025-12-03 06:26:34,713 | INFO     | sum of deviations: -587249649722.9485
[2025-12-03 01:27:38] 2025-12-03 06:26:34,713 | INFO     | mean x: 1764723938.6235864
[2025-12-03 01:27:38] 2025-12-03 06:26:34,713 | INFO     | mean y: 3263747.2019386105
[2025-12-03 01:27:38] 2025-12-03 06:26:34,713 | INFO     | intersect: 14094371092.59892
[2025-12-03 01:27:38] 2025-12-03 06:26:34,714 | INFO     | chi2: 25.956962721829576
[2025-12-03 01:27:38] 2025-12-03 06:26:34,714 | INFO     | current chi2=25.956962721829576 (change=13.267038392919526 %)
[2025-12-03 01:27:38] 2025-12-03 06:26:34,718 | INFO     | right removable region: 618
[2025-12-03 01:27:38] 2025-12-03 06:26:34,718 | INFO     | sum of square deviations: 73544601631.29567
[2025-12-03 01:27:38] 2025-12-03 06:26:34,727 | INFO     | sum of deviations: -1022230609438.9095
[2025-12-03 01:27:38] 2025-12-03 06:26:34,727 | INFO     | mean x: 1764724243.6235864
[2025-12-03 01:27:38] 2025-12-03 06:26:34,727 | INFO     | mean y: 3259729.103392569
[2025-12-03 01:27:38] 2025-12-03 06:26:34,727 | INFO     | intersect: 24531982423.051804
[2025-12-03 01:27:38] 2025-12-03 06:26:34,728 | INFO     | chi2: 27.742713891294354
[2025-12-03 01:27:38] 2025-12-03 06:26:34,728 | INFO     | current chi2=27.742713891294354 (change=7.300104230366989 %)
[2025-12-03 01:27:38] 2025-12-03 06:26:34,728 | INFO     | left removable region: 10
[2025-12-03 01:27:38] 2025-12-03 06:26:34,728 | INFO     | sum of square deviations: 69693212215.37985
[2025-12-03 01:27:38] 2025-12-03 06:26:34,736 | INFO     | sum of deviations: -754795715049.6168
[2025-12-03 01:27:38] 2025-12-03 06:26:34,737 | INFO     | mean x: 1764724213.149671
[2025-12-03 01:27:38] 2025-12-03 06:26:34,737 | INFO     | mean y: 3286153.666118421
[2025-12-03 01:27:38] 2025-12-03 06:26:34,737 | INFO     | intersect: 19115710907.64714
[2025-12-03 01:27:38] 2025-12-03 06:26:34,737 | INFO     | chi2: 23.027403185916505
[2025-12-03 01:27:38] 2025-12-03 06:26:34,737 | INFO     | current memory leak: -10.83 B/s (using 608 data points, chi2=23.03)
[2025-12-03 01:27:38] 2025-12-03 06:26:34,742 | INFO     | could have reported an average CPU frequency of 3799 MHz (24 samples)
[2025-12-03 01:27:38] 2025-12-03 06:26:34,742 | INFO     | ..............................
[2025-12-03 01:27:38] 2025-12-03 06:26:34,742 | INFO     | . Timing measurements:
[2025-12-03 01:27:38] 2025-12-03 06:26:34,742 | INFO     | . get job = 0 s
[2025-12-03 01:27:38] 2025-12-03 06:26:34,743 | INFO     | . initial setup = 4 s
[2025-12-03 01:27:38] 2025-12-03 06:26:34,743 | INFO     | . payload setup = 23 s
[2025-12-03 01:27:38] 2025-12-03 06:26:34,743 | INFO     | . stage-in = 0 s
[2025-12-03 01:27:38] 2025-12-03 06:26:34,743 | INFO     | . payload execution = 38070 s
[2025-12-03 01:27:38] 2025-12-03 06:26:34,743 | INFO     | . stage-out = 6 s
[2025-12-03 01:27:38] 2025-12-03 06:26:34,743 | INFO     | . log creation = 2 s
[2025-12-03 01:27:38] 2025-12-03 06:26:34,743 | INFO     | ..............................
[2025-12-03 01:27:38] 2025-12-03 06:26:34,981 | INFO     | time since job start (38174s) is within the limit (172800.0s)
[2025-12-03 01:27:38] 2025-12-03 06:26:35,126 | INFO     | 
[2025-12-03 01:27:38] 2025-12-03 06:26:35,127 | INFO     | job summary report
[2025-12-03 01:27:38] 2025-12-03 06:26:35,127 | INFO     | --------------------------------------------------
[2025-12-03 01:27:38] 2025-12-03 06:26:35,127 | INFO     | PanDA job id: 6905332098
[2025-12-03 01:27:38] 2025-12-03 06:26:35,127 | INFO     | task id: 47530725
[2025-12-03 01:27:38] 2025-12-03 06:26:35,127 | INFO     | errors: (none)
[2025-12-03 01:27:38] 2025-12-03 06:26:35,127 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 01:27:38] 2025-12-03 06:26:35,127 | INFO     | pilot state: finished 
[2025-12-03 01:27:38] 2025-12-03 06:26:35,127 | INFO     | transexitcode: 0
[2025-12-03 01:27:38] 2025-12-03 06:26:35,127 | INFO     | exeerrorcode: 0
[2025-12-03 01:27:38] 2025-12-03 06:26:35,127 | INFO     | exeerrordiag: 
[2025-12-03 01:27:38] 2025-12-03 06:26:35,127 | INFO     | exitcode: 0
[2025-12-03 01:27:38] 2025-12-03 06:26:35,127 | INFO     | exitmsg: OK
[2025-12-03 01:27:38] 2025-12-03 06:26:35,143 | INFO     | cpuconsumptiontime: 121128 s
[2025-12-03 01:27:38] 2025-12-03 06:26:35,143 | INFO     | nevents: 1000
[2025-12-03 01:27:38] 2025-12-03 06:26:35,143 | INFO     | neventsw: 0
[2025-12-03 01:27:38] 2025-12-03 06:26:35,143 | INFO     | pid: 201395
[2025-12-03 01:27:38] 2025-12-03 06:26:35,143 | INFO     | pgrp: 201395
[2025-12-03 01:27:38] 2025-12-03 06:26:35,143 | INFO     | corecount: 8
[2025-12-03 01:27:38] 2025-12-03 06:26:35,143 | INFO     | event service: False
[2025-12-03 01:27:38] 2025-12-03 06:26:35,143 | INFO     | sizes: {0: 2284228, 1: 2284427, 12: 2284427, 13: 2284717, 23: 2284773, 38098: 2347039, 38106: 2356033, 38108: 2356089, 38139: 2356335}
[2025-12-03 01:27:38] 2025-12-03 06:26:35,143 | INFO     | --------------------------------------------------
[2025-12-03 01:27:38] 2025-12-03 06:26:35,143 | INFO     | 
[2025-12-03 01:27:38] 2025-12-03 06:26:35,143 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-03 01:27:38] 2025-12-03 06:26:35,198 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,199 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 01:27:38] 2025-12-03 06:26:35,200 | INFO     | job 6905332098 has completed (purged errors)
[2025-12-03 01:27:38] 2025-12-03 06:26:35,200 | INFO     | overall cleanup function is called
[2025-12-03 01:27:38] 2025-12-03 06:26:36,355 | INFO     | --- collectZombieJob: --- 10, [201395]
[2025-12-03 01:27:38] 2025-12-03 06:26:36,357 | INFO     | zombie collector waiting for pid 201395
[2025-12-03 01:27:38] 2025-12-03 06:26:36,357 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 01:27:38] 2025-12-03 06:26:36,358 | INFO     | collected zombie processes
[2025-12-03 01:27:38] 2025-12-03 06:26:36,358 | INFO     | will attempt to kill all subprocesses of pid=201395
[2025-12-03 01:27:38] 2025-12-03 06:26:37,703 | INFO     | process IDs to be killed: [201395] (in reverse order)
[2025-12-03 01:27:38] 2025-12-03 06:26:38,705 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 01:27:38] 2025-12-03 06:26:38,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 01:27:38] 2025-12-03 06:26:38,779 | INFO     | did not find any defunct processes belonging to 201395
[2025-12-03 01:27:38] 2025-12-03 06:26:38,841 | INFO     | did not find any defunct processes belonging to 201395
[2025-12-03 01:27:38] 2025-12-03 06:26:38,842 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 01:27:38] 2025-12-03 06:26:38,843 | INFO     | ready for new job
[2025-12-03 01:27:38] 2025-12-03 06:26:38,843 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 01:27:38] 2025-12-03 06:26:38,865 | INFO     | ***************************************
[2025-12-03 01:27:38] 2025-12-03 06:26:38,865 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 01:27:38] 2025-12-03 06:26:38,865 | INFO     | ***************************************
[2025-12-03 01:27:38] 2025-12-03 06:26:38,865 | INFO     | 
[2025-12-03 01:27:38] 2025-12-03 06:26:38,886 | INFO     | architecture information:
[2025-12-03 01:27:38] 2025-12-03 06:26:38,890 | INFO     | executing command: cat /etc/os-release
[2025-12-03 01:27:38] 2025-12-03 06:26:38,955 | INFO     | cat /etc/os-release:
[2025-12-03 01:27:38] NAME="CentOS Linux"
[2025-12-03 01:27:38] VERSION="7 (Core)"
[2025-12-03 01:27:38] ID="centos"
[2025-12-03 01:27:38] ID_LIKE="rhel fedora"
[2025-12-03 01:27:38] VERSION_ID="7"
[2025-12-03 01:27:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 01:27:38] ANSI_COLOR="0;31"
[2025-12-03 01:27:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 01:27:38] HOME_URL="https://www.centos.org/"
[2025-12-03 01:27:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 01:27:38] 
[2025-12-03 01:27:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 01:27:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 01:27:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 01:27:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 01:27:38] 
[2025-12-03 01:27:38] 2025-12-03 06:26:38,955 | INFO     | ***************************************
[2025-12-03 01:27:38] 2025-12-03 06:26:39,458 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-03 01:27:38] 2025-12-03 06:26:39,540 | INFO     | sufficient remaining disk space (162293350400 B)
[2025-12-03 01:27:38] 2025-12-03 06:26:39,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 01:27:38] 2025-12-03 06:26:39,541 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 01:27:38] 2025-12-03 06:26:39,541 | INFO     | update_server=False
[2025-12-03 01:27:38] 2025-12-03 06:26:39,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 01:27:38] 2025-12-03 06:26:39,845 | INFO     | all payload control threads have been joined
[2025-12-03 01:27:38] 2025-12-03 06:26:39,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 01:27:38] 2025-12-03 06:26:39,957 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 01:27:38] 2025-12-03 06:26:40,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 01:27:38] 2025-12-03 06:26:40,153 | INFO     | aborting loop
[2025-12-03 01:27:38] 2025-12-03 06:26:40,329 | INFO     | all job control threads have been joined
[2025-12-03 01:27:38] 2025-12-03 06:26:40,450 | INFO     | all data control threads have been joined
[2025-12-03 01:27:38] 2025-12-03 06:26:40,548 | INFO     | [job] retrieve thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:40,605 | INFO     | [payload] failed_post thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:40,706 | INFO     | [payload] validate_post thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:40,844 | INFO     | [job] validate thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:40,851 | INFO     | [payload] control thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:40,976 | INFO     | [job] queue monitor thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:41,159 | INFO     | [job] job monitor thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:41,318 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 01:27:38] 2025-12-03 06:26:41,339 | INFO     | [job] control thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:41,456 | INFO     | [data] control thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:41,741 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:41,770 | INFO     | [data] copytool_in thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:41,830 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:41,885 | INFO     | [data] copytool_out thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:41,935 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:41,970 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:26:45,330 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 01:27:38] 2025-12-03 06:27:10,143 | INFO     | PID=186483 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-03 01:27:38] 2025-12-03 06:27:10,144 | INFO     | .. there are 51 such processes running
[2025-12-03 01:27:38] 2025-12-03 06:27:10,145 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 01:27:38] 2025-12-03 06:27:10,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 01:27:38] 2025-12-03 06:27:10,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 01:27:38] 2025-12-03 06:27:30,743 | INFO     | [monitor] cgroup control has ended
[2025-12-03 01:27:38] 2025-12-03 06:27:31,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140493210609472)>', '<ExcThread(monitor, started 140492725540608)>']
[2025-12-03 01:27:38] 2025-12-03 06:27:32,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 01:27:38] 2025-12-03 06:27:32,326 | INFO     | [monitor] control thread has ended
[2025-12-03 01:27:38] 2025-12-03 06:27:36,377 | INFO     | all workflow threads have been joined
[2025-12-03 01:27:38] 2025-12-03 06:27:36,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 01:27:38] 2025-12-03 06:27:36,377 | INFO     | traces error code: 0
[2025-12-03 01:27:38] 2025-12-03 06:27:36,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 01:27:38] 2025-12-03 06:27:37,487 [wrapper] ==== pilot stdout END ====
[2025-12-03 01:27:38] 2025-12-03 06:27:37,503 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 01:27:38] 2025-12-03 06:27:37,527 [wrapper] pilotpid: 186483
[2025-12-03 01:27:38] 2025-12-03 06:27:37,548 [wrapper] Pilot exit status: 0
[2025-12-03 01:27:38] 2025-12-03 06:27:37,683 [wrapper] pandaids: 6905332098
[2025-12-03 01:27:38] 2025-12-03 06:27:37,940 [wrapper] cleanup supervisor_pilot 1410474 186484
[2025-12-03 01:27:38] 2025-12-03 06:27:37,969 [wrapper] Test setup, not cleaning
[2025-12-03 01:27:38] 2025-12-03 06:27:37,992 [wrapper] apfmon messages muted
[2025-12-03 01:27:38] 2025-12-03 06:27:38,024 [wrapper] ==== wrapper stdout END ====
[2025-12-03 01:27:38] 2025-12-03 06:27:38,045 [wrapper] ==== wrapper stderr END ====
[2025-12-03 01:27:38]  *** Error codes and diagnostics ***
[2025-12-03 01:27:38]     "exeErrorCode": 0,
[2025-12-03 01:27:38]     "exeErrorDiag": "",
[2025-12-03 01:27:38]     "pilotErrorCode": 0,
[2025-12-03 01:27:38]     "pilotErrorDiag": "",
[2025-12-03 01:27:38]  *** Listing of results directory ***
[2025-12-03 01:27:38] total 1074252
[2025-12-03 01:27:38] -rwx------. 1 boincer umatlas     36292 Nov 29 19:20 runpilot2-wrapper.sh
[2025-12-03 01:27:38] -rw-r--r--. 1 boincer umatlas    576529 Nov 29 19:24 pilot3.tar.gz
[2025-12-03 01:27:38] -rw-r--r--. 1 boincer umatlas      5112 Nov 29 19:24 queuedata.json
[2025-12-03 01:27:38] -rw-r--r--. 1 boincer umatlas       100 Dec  2 14:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 01:27:38] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 14:49 run_atlas
[2025-12-03 01:27:38] -rw-r--r--. 1 boincer umatlas       105 Dec  2 14:49 job.xml
[2025-12-03 01:27:38] -rw-r--r--. 2 boincer umatlas 377725870 Dec  2 14:49 EVNT.47530720._000035.pool.root.1
[2025-12-03 01:27:38] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 14:49 start_atlas.sh
[2025-12-03 01:27:38] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 14:49 shared
[2025-12-03 01:27:38] -rw-r--r--. 2 boincer umatlas    590135 Dec  2 14:49 input.tar.gz
[2025-12-03 01:27:38] -rw-r--r--. 1 boincer umatlas         0 Dec  2 14:49 boinc_lockfile
[2025-12-03 01:27:38] -rw-r--r--. 1 boincer umatlas      2878 Dec  2 14:49 pandaJob.out
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas        57 Dec  2 14:49 setup.sh.local
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas    989224 Dec  2 14:50 agis_schedconf.cvmfs.json
[2025-12-03 01:27:38] drwx------. 5 boincer umatlas      4096 Dec  2 14:50 pilot3
[2025-12-03 01:27:38] -rw-r--r--. 1 boincer umatlas       533 Dec  3 00:47 boinc_task_state.xml
[2025-12-03 01:27:38] -rw-r--r--. 1 boincer umatlas      7173 Dec  3 01:18 init_data.xml
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas 704517639 Dec  3 01:24 HITS.47530725._001841.pool.root.1
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas      1065 Dec  3 01:25 memory_monitor_summary.json
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas   1516240 Dec  3 01:25 agis_ddmendpoints.agis.ALL.json
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas   1950483 Dec  3 01:26 log.47530725._001841.job.log.tgz.1
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas     27743 Dec  3 01:26 heartbeat.json
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas        95 Dec  3 01:27 pilot_heartbeat.json
[2025-12-03 01:27:38] -rw-r--r--. 1 boincer umatlas        29 Dec  3 01:27 wrapper_checkpoint.txt
[2025-12-03 01:27:38] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 01:27 boinc_mmap_file
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas      4824 Dec  3 01:27 pilotlog.txt
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas   4964750 Dec  3 01:27 log.47530725._001841.job.log.1
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas       353 Dec  3 01:27 output.list
[2025-12-03 01:27:38] -rw-r--r--. 1 boincer umatlas       620 Dec  3 01:27 runtime_log
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas   6952960 Dec  3 01:27 result.tar.gz
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas       665 Dec  3 01:27 UM7MDmZMkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdEMKDmAf6Rpn.diag
[2025-12-03 01:27:38] -rw-r--r--. 1 boincer umatlas      9338 Dec  3 01:27 runtime_log.err
[2025-12-03 01:27:38] -rw-r--r--. 1 boincer umatlas     21533 Dec  3 01:27 stderr.txt
[2025-12-03 01:27:38] HITS file was successfully produced:
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas 704517639 Dec  3 01:24 shared/HITS.pool.root.1
[2025-12-03 01:27:38]  *** Contents of shared directory: ***
[2025-12-03 01:27:38] total 1064280
[2025-12-03 01:27:38] -rw-r--r--. 2 boincer umatlas 377725870 Dec  2 14:49 ATLAS.root_0
[2025-12-03 01:27:38] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 14:49 start_atlas.sh
[2025-12-03 01:27:38] -rw-r--r--. 2 boincer umatlas    590135 Dec  2 14:49 input.tar.gz
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas 704517639 Dec  3 01:24 HITS.pool.root.1
[2025-12-03 01:27:38] -rw-------. 1 boincer umatlas   6952960 Dec  3 01:27 result.tar.gz
01:27:40 (175859): run_atlas exited; CPU time 121637.735406
01:27:40 (175859): called boinc_finish(0)

</stderr_txt>
]]>

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