Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:24:28 (632753): wrapper (7.7.26015): starting
14:24:28 (632753): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 14:24:28] Arguments: --nthreads 8
[2025-12-02 14:24:28] Threads: 8
[2025-12-02 14:24:28] Checking for CVMFS
[2025-12-02 14:24:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 14:24:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 14:24:29] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 14:24:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 14:24:30] 2.13.3.0 12357 39059 305908 153567 2 498 17345071 32503809 58867 16776704 0 625193846 99.633 551578495 45386 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 14:24:30] CVMFS is ok
[2025-12-02 14:24:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 14:24:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 14:24:30] Further information can be found at the LHC@home message board.
[2025-12-02 14:24:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 14:24:30] Checking for apptainer binary...
[2025-12-02 14:24:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 14:24:30] Running /usr/bin/apptainer --version
[2025-12-02 14:24:31] apptainer version 1.4.4-1.el9
[2025-12-02 14:24:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 14:24:31] c8-7-2.aglt2.org
[2025-12-02 14:24:31] apptainer works
[2025-12-02 14:24:31] Set ATHENA_PROC_NUMBER=8
[2025-12-02 14:24:31] Set ATHENA_CORE_NUMBER=8
[2025-12-02 14:24:31] Starting ATLAS job with PandaID=6905330546
[2025-12-02 14:24:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 02:00:36]  *** The last 200 lines of the pilot log: ***
[2025-12-03 02:00:36] 2025-12-03 07:00:00,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 02:00:36] 2025-12-03 07:00:00,218 | INFO     | fitting pss+swap vs Time
[2025-12-03 02:00:36] 2025-12-03 07:00:00,234 | INFO     | sum of square deviations: 97064704461.97382
[2025-12-03 02:00:36] 2025-12-03 07:00:00,253 | INFO     | sum of deviations: 1276631869507.6858
[2025-12-03 02:00:36] 2025-12-03 07:00:00,254 | INFO     | mean x: 1764724466.34757
[2025-12-03 02:00:36] 2025-12-03 07:00:00,254 | INFO     | mean y: 3377486.6877761413
[2025-12-03 02:00:36] 2025-12-03 07:00:00,254 | INFO     | intersect: -23206949141.585754
[2025-12-03 02:00:36] 2025-12-03 07:00:00,254 | INFO     | chi2: 14.677954884774266
[2025-12-03 02:00:36] 2025-12-03 07:00:00,254 | INFO     | sum of square deviations: 94936320360.3266
[2025-12-03 02:00:36] 2025-12-03 07:00:00,267 | INFO     | sum of deviations: 1539985160608.5703
[2025-12-03 02:00:36] 2025-12-03 07:00:00,267 | INFO     | mean x: 1764724313.8575668
[2025-12-03 02:00:36] 2025-12-03 07:00:00,267 | INFO     | mean y: 3396340.505934718
[2025-12-03 02:00:36] 2025-12-03 07:00:00,267 | INFO     | intersect: -28622626298.57547
[2025-12-03 02:00:36] 2025-12-03 07:00:00,268 | INFO     | chi2: 11.658932071705184
[2025-12-03 02:00:36] 2025-12-03 07:00:00,268 | INFO     | current chi2=11.658932071705184 (change=20.568415946016934 %)
[2025-12-03 02:00:36] 2025-12-03 07:00:00,268 | INFO     | right removable region: 673
[2025-12-03 02:00:36] 2025-12-03 07:00:00,269 | INFO     | sum of square deviations: 94935762210.3266
[2025-12-03 02:00:36] 2025-12-03 07:00:00,310 | INFO     | sum of deviations: 937424074073.7332
[2025-12-03 02:00:36] 2025-12-03 07:00:00,310 | INFO     | mean x: 1764724618.8575668
[2025-12-03 02:00:36] 2025-12-03 07:00:00,310 | INFO     | mean y: 3401783.434718101
[2025-12-03 02:00:36] 2025-12-03 07:00:00,310 | INFO     | intersect: -17422016239.361023
[2025-12-03 02:00:36] 2025-12-03 07:00:00,311 | INFO     | chi2: 9.644907895891796
[2025-12-03 02:00:36] 2025-12-03 07:00:00,311 | INFO     | current chi2=9.644907895891796 (change=34.289838253307 %)
[2025-12-03 02:00:36] 2025-12-03 07:00:00,311 | INFO     | sum of square deviations: 92838169383.54253
[2025-12-03 02:00:36] 2025-12-03 07:00:00,334 | INFO     | sum of deviations: 634088697136.3903
[2025-12-03 02:00:36] 2025-12-03 07:00:00,334 | INFO     | mean x: 1764724771.367713
[2025-12-03 02:00:36] 2025-12-03 07:00:00,334 | INFO     | mean y: 3423836.823617339
[2025-12-03 02:00:36] 2025-12-03 07:00:00,334 | INFO     | intersect: -12049722390.758413
[2025-12-03 02:00:36] 2025-12-03 07:00:00,334 | INFO     | chi2: 5.80815093305701
[2025-12-03 02:00:36] 2025-12-03 07:00:00,334 | INFO     | current chi2=5.80815093305701 (change=39.78013065805465 %)
[2025-12-03 02:00:36] 2025-12-03 07:00:00,347 | INFO     | sum of square deviations: 90771693419.11894
[2025-12-03 02:00:36] 2025-12-03 07:00:00,352 | INFO     | sum of deviations: 393915719918.2971
[2025-12-03 02:00:36] 2025-12-03 07:00:00,352 | INFO     | mean x: 1764724923.878012
[2025-12-03 02:00:36] 2025-12-03 07:00:00,352 | INFO     | mean y: 3441546.1641566264
[2025-12-03 02:00:36] 2025-12-03 07:00:00,353 | INFO     | intersect: -7654814708.210749
[2025-12-03 02:00:36] 2025-12-03 07:00:00,353 | INFO     | chi2: 3.404336208839789
[2025-12-03 02:00:36] 2025-12-03 07:00:00,353 | INFO     | current chi2=3.404336208839789 (change=41.386919037106 %)
[2025-12-03 02:00:36] 2025-12-03 07:00:00,353 | INFO     | sum of square deviations: 88736466406.42192
[2025-12-03 02:00:36] 2025-12-03 07:00:00,358 | INFO     | sum of deviations: 358106030868.7209
[2025-12-03 02:00:36] 2025-12-03 07:00:00,358 | INFO     | mean x: 1764725076.3748102
[2025-12-03 02:00:36] 2025-12-03 07:00:00,359 | INFO     | mean y: 3444225.766312595
[2025-12-03 02:00:36] 2025-12-03 07:00:00,359 | INFO     | intersect: -7118303103.912664
[2025-12-03 02:00:36] 2025-12-03 07:00:00,359 | INFO     | chi2: 3.3741466725513263
[2025-12-03 02:00:36] 2025-12-03 07:00:00,359 | INFO     | current chi2=3.3741466725513263 (change=0.886796556993155 %)
[2025-12-03 02:00:36] 2025-12-03 07:00:00,359 | INFO     | left removable region: 40
[2025-12-03 02:00:36] 2025-12-03 07:00:00,359 | INFO     | sum of square deviations: 78642114253.71509
[2025-12-03 02:00:36] 2025-12-03 07:00:00,365 | INFO     | sum of deviations: 594129942053.3696
[2025-12-03 02:00:36] 2025-12-03 07:00:00,365 | INFO     | mean x: 1764725503.3838863
[2025-12-03 02:00:36] 2025-12-03 07:00:00,365 | INFO     | mean y: 3469066.8009478673
[2025-12-03 02:00:36] 2025-12-03 07:00:00,365 | INFO     | intersect: -13328780085.13537
[2025-12-03 02:00:36] 2025-12-03 07:00:00,366 | INFO     | chi2: 0.0907899991892524
[2025-12-03 02:00:36] 2025-12-03 07:00:00,366 | INFO     | current memory leak: 7.55 B/s (using 633 data points, chi2=0.09)
[2025-12-03 02:00:36] 2025-12-03 07:00:00,366 | INFO     | could have reported an average CPU frequency of 3797 MHz (26 samples)
[2025-12-03 02:00:36] 2025-12-03 07:00:00,367 | INFO     | ..............................
[2025-12-03 02:00:36] 2025-12-03 07:00:00,367 | INFO     | . Timing measurements:
[2025-12-03 02:00:36] 2025-12-03 07:00:00,367 | INFO     | . get job = 0 s
[2025-12-03 02:00:36] 2025-12-03 07:00:00,367 | INFO     | . initial setup = 5 s
[2025-12-03 02:00:36] 2025-12-03 07:00:00,367 | INFO     | . payload setup = 106 s
[2025-12-03 02:00:36] 2025-12-03 07:00:00,367 | INFO     | . stage-in = 0 s
[2025-12-03 02:00:36] 2025-12-03 07:00:00,367 | INFO     | . payload execution = 41394 s
[2025-12-03 02:00:36] 2025-12-03 07:00:00,367 | INFO     | . stage-out = 5 s
[2025-12-03 02:00:36] 2025-12-03 07:00:00,367 | INFO     | . log creation = 1 s
[2025-12-03 02:00:36] 2025-12-03 07:00:00,367 | INFO     | ..............................
[2025-12-03 02:00:36] 2025-12-03 07:00:00,584 | INFO     | time since job start (41642s) is within the limit (172800.0s)
[2025-12-03 02:00:36] 2025-12-03 07:00:00,925 | INFO     | 
[2025-12-03 02:00:36] 2025-12-03 07:00:00,925 | INFO     | job summary report
[2025-12-03 02:00:36] 2025-12-03 07:00:00,925 | INFO     | --------------------------------------------------
[2025-12-03 02:00:36] 2025-12-03 07:00:00,925 | INFO     | PanDA job id: 6905330546
[2025-12-03 02:00:36] 2025-12-03 07:00:00,925 | INFO     | task id: 47530725
[2025-12-03 02:00:36] 2025-12-03 07:00:00,925 | INFO     | errors: (none)
[2025-12-03 02:00:36] 2025-12-03 07:00:00,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | pilot state: finished 
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | transexitcode: 0
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | exeerrorcode: 0
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | exeerrordiag: 
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | exitcode: 0
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | exitmsg: OK
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | cpuconsumptiontime: 121677 s
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | nevents: 1000
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | neventsw: 0
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | pid: 707381
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | pgrp: 707381
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | corecount: 8
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | event service: False
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | sizes: {0: 2284228, 1: 2284427, 12: 2284427, 23: 2284455, 34: 2284483, 36: 2284773, 44: 2284929, 41505: 2347184, 41506: 2347183, 41513: 2356233, 41515: 2356289, 41
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | --------------------------------------------------
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | 
[2025-12-03 02:00:36] 2025-12-03 07:00:00,926 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-12-03 02:00:36] 2025-12-03 07:00:00,993 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,993 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,994 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,994 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,994 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,994 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | job 6905330546 has completed (purged errors)
[2025-12-03 02:00:36] 2025-12-03 07:00:00,996 | INFO     | overall cleanup function is called
[2025-12-03 02:00:36] 2025-12-03 07:00:02,023 | INFO     | --- collectZombieJob: --- 10, [707381]
[2025-12-03 02:00:36] 2025-12-03 07:00:02,023 | INFO     | zombie collector waiting for pid 707381
[2025-12-03 02:00:36] 2025-12-03 07:00:02,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 02:00:36] 2025-12-03 07:00:02,023 | INFO     | collected zombie processes
[2025-12-03 02:00:36] 2025-12-03 07:00:02,023 | INFO     | will attempt to kill all subprocesses of pid=707381
[2025-12-03 02:00:36] 2025-12-03 07:00:04,947 | INFO     | process IDs to be killed: [707381] (in reverse order)
[2025-12-03 02:00:36] 2025-12-03 07:00:05,485 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 02:00:36] 2025-12-03 07:00:05,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 02:00:36] 2025-12-03 07:00:05,549 | INFO     | did not find any defunct processes belonging to 707381
[2025-12-03 02:00:36] 2025-12-03 07:00:05,610 | INFO     | did not find any defunct processes belonging to 707381
[2025-12-03 02:00:36] 2025-12-03 07:00:05,614 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 02:00:36] 2025-12-03 07:00:05,614 | INFO     | ready for new job
[2025-12-03 02:00:36] 2025-12-03 07:00:05,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 02:00:36] 2025-12-03 07:00:05,617 | INFO     | ***************************************
[2025-12-03 02:00:36] 2025-12-03 07:00:05,617 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 02:00:36] 2025-12-03 07:00:05,617 | INFO     | ***************************************
[2025-12-03 02:00:36] 2025-12-03 07:00:05,617 | INFO     | 
[2025-12-03 02:00:36] 2025-12-03 07:00:05,626 | INFO     | architecture information:
[2025-12-03 02:00:36] 2025-12-03 07:00:05,633 | INFO     | executing command: cat /etc/os-release
[2025-12-03 02:00:36] 2025-12-03 07:00:05,675 | INFO     | cat /etc/os-release:
[2025-12-03 02:00:36] NAME="CentOS Linux"
[2025-12-03 02:00:36] VERSION="7 (Core)"
[2025-12-03 02:00:36] ID="centos"
[2025-12-03 02:00:36] ID_LIKE="rhel fedora"
[2025-12-03 02:00:36] VERSION_ID="7"
[2025-12-03 02:00:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 02:00:36] ANSI_COLOR="0;31"
[2025-12-03 02:00:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 02:00:36] HOME_URL="https://www.centos.org/"
[2025-12-03 02:00:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 02:00:36] 
[2025-12-03 02:00:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 02:00:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 02:00:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 02:00:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 02:00:36] 
[2025-12-03 02:00:36] 2025-12-03 07:00:05,675 | INFO     | ***************************************
[2025-12-03 02:00:36] 2025-12-03 07:00:06,179 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-12-03 02:00:36] 2025-12-03 07:00:06,224 | INFO     | sufficient remaining disk space (91276443648 B)
[2025-12-03 02:00:36] 2025-12-03 07:00:06,224 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 02:00:36] 2025-12-03 07:00:06,225 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 02:00:36] 2025-12-03 07:00:06,225 | INFO     | update_server=False
[2025-12-03 02:00:36] 2025-12-03 07:00:06,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 02:00:36] 2025-12-03 07:00:06,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 02:00:36] 2025-12-03 07:00:06,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 02:00:36] 2025-12-03 07:00:06,225 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 02:00:36] 2025-12-03 07:00:06,225 | INFO     | aborting loop
[2025-12-03 02:00:36] 2025-12-03 07:00:06,750 | INFO     | all data control threads have been joined
[2025-12-03 02:00:36] 2025-12-03 07:00:07,056 | INFO     | all job control threads have been joined
[2025-12-03 02:00:36] 2025-12-03 07:00:07,230 | INFO     | [job] retrieve thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:07,230 | INFO     | [job] queue monitor thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:07,256 | INFO     | [job] job monitor thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:07,328 | INFO     | [job] validate thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:07,472 | INFO     | [payload] validate_post thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:07,540 | INFO     | all payload control threads have been joined
[2025-12-03 02:00:36] 2025-12-03 07:00:07,557 | INFO     | [payload] failed_post thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:07,636 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:07,636 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:07,637 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:07,757 | INFO     | [data] control thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:08,062 | INFO     | [job] control thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:08,202 | INFO     | [data] copytool_in thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:08,232 | INFO     | [data] copytool_out thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:08,408 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:08,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 02:00:36] 2025-12-03 07:00:08,546 | INFO     | [payload] control thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:12,427 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 02:00:36] 2025-12-03 07:00:13,329 | INFO     | [monitor] cgroup control has ended
[2025-12-03 02:00:36] 2025-12-03 07:00:13,866 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600900446016)>', '<ExcThread(monitor, started 140600552699648)>']
[2025-12-03 02:00:36] 2025-12-03 07:00:18,892 | INFO     | all workflow threads have been joined
[2025-12-03 02:00:36] 2025-12-03 07:00:18,892 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 02:00:36] 2025-12-03 07:00:18,892 | INFO     | traces error code: 0
[2025-12-03 02:00:36] 2025-12-03 07:00:18,893 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 02:00:36] 2025-12-03 07:00:35,108 | INFO     | PID=660754 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-03 02:00:36] 2025-12-03 07:00:35,116 | INFO     | .. there are 42 such processes running
[2025-12-03 02:00:36] 2025-12-03 07:00:35,117 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 02:00:36] 2025-12-03 07:00:35,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 02:00:36] 2025-12-03 07:00:35,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 02:00:36] 2025-12-03 07:00:35,117 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 02:00:36] 2025-12-03 07:00:35,117 | INFO     | [monitor] control thread has ended
[2025-12-03 02:00:36] 2025-12-03 07:00:35,376 [wrapper] ==== pilot stdout END ====
[2025-12-03 02:00:36] 2025-12-03 07:00:35,402 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 02:00:36] 2025-12-03 07:00:35,415 [wrapper] pilotpid: 660754
[2025-12-03 02:00:36] 2025-12-03 07:00:35,457 [wrapper] Pilot exit status: 0
[2025-12-03 02:00:36] 2025-12-03 07:00:35,490 [wrapper] pandaids: 6905330546
[2025-12-03 02:00:36] 2025-12-03 07:00:35,689 [wrapper] cleanup supervisor_pilot 2735714 660755
[2025-12-03 02:00:36] 2025-12-03 07:00:35,734 [wrapper] Test setup, not cleaning
[2025-12-03 02:00:36] 2025-12-03 07:00:35,737 [wrapper] apfmon messages muted
[2025-12-03 02:00:36] 2025-12-03 07:00:35,754 [wrapper] ==== wrapper stdout END ====
[2025-12-03 02:00:36] 2025-12-03 07:00:35,798 [wrapper] ==== wrapper stderr END ====
[2025-12-03 02:00:36]  *** Error codes and diagnostics ***
[2025-12-03 02:00:36]     "exeErrorCode": 0,
[2025-12-03 02:00:36]     "exeErrorDiag": "",
[2025-12-03 02:00:36]     "pilotErrorCode": 0,
[2025-12-03 02:00:36]     "pilotErrorDiag": "",
[2025-12-03 02:00:36]  *** Listing of results directory ***
[2025-12-03 02:00:36] total 1071808
[2025-12-03 02:00:36] -rwx------. 1 boincer umatlas     36292 Nov 29 19:20 runpilot2-wrapper.sh
[2025-12-03 02:00:36] -rw-r--r--. 1 boincer umatlas    576529 Nov 29 19:24 pilot3.tar.gz
[2025-12-03 02:00:36] -rw-r--r--. 1 boincer umatlas      5112 Nov 29 19:24 queuedata.json
[2025-12-03 02:00:36] -rw-r--r--. 1 boincer umatlas       100 Dec  2 14:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 02:00:36] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 14:24 run_atlas
[2025-12-03 02:00:36] -rw-r--r--. 1 boincer umatlas       105 Dec  2 14:24 job.xml
[2025-12-03 02:00:36] -rw-r--r--. 2 boincer umatlas 376577342 Dec  2 14:24 EVNT.47530720._000036.pool.root.1
[2025-12-03 02:00:36] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 14:24 start_atlas.sh
[2025-12-03 02:00:36] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 14:24 shared
[2025-12-03 02:00:36] -rw-r--r--. 2 boincer umatlas    590134 Dec  2 14:24 input.tar.gz
[2025-12-03 02:00:36] -rw-r--r--. 1 boincer umatlas         0 Dec  2 14:24 boinc_lockfile
[2025-12-03 02:00:36] -rw-r--r--. 1 boincer umatlas      2878 Dec  2 14:24 pandaJob.out
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas        57 Dec  2 14:24 setup.sh.local
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas    989224 Dec  2 14:25 agis_schedconf.cvmfs.json
[2025-12-03 02:00:36] drwx------. 5 boincer umatlas      4096 Dec  2 14:25 pilot3
[2025-12-03 02:00:36] -rw-r--r--. 1 boincer umatlas       533 Dec  3 01:52 boinc_task_state.xml
[2025-12-03 02:00:36] -rw-r--r--. 1 boincer umatlas      7171 Dec  3 01:56 init_data.xml
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas 703778479 Dec  3 01:58 HITS.47530725._001707.pool.root.1
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas      1059 Dec  3 01:59 memory_monitor_summary.json
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas   1516240 Dec  3 01:59 agis_ddmendpoints.agis.ALL.json
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas   1926391 Dec  3 01:59 log.47530725._001707.job.log.tgz.1
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas     27808 Dec  3 02:00 heartbeat.json
[2025-12-03 02:00:36] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 02:00 boinc_mmap_file
[2025-12-03 02:00:36] -rw-r--r--. 1 boincer umatlas        29 Dec  3 02:00 wrapper_checkpoint.txt
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas        95 Dec  3 02:00 pilot_heartbeat.json
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas       822 Dec  3 02:00 pilotlog.txt
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas   4685774 Dec  3 02:00 log.47530725._001707.job.log.1
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas       353 Dec  3 02:00 output.list
[2025-12-03 02:00:36] -rw-r--r--. 1 boincer umatlas       620 Dec  3 02:00 runtime_log
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas   6656000 Dec  3 02:00 result.tar.gz
[2025-12-03 02:00:36] -rw-r--r--. 1 boincer umatlas      9333 Dec  3 02:00 runtime_log.err
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas       661 Dec  3 02:00 m5eNDmZMkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDWPKDmXgajgn.diag
[2025-12-03 02:00:36] -rw-r--r--. 1 boincer umatlas     21161 Dec  3 02:00 stderr.txt
[2025-12-03 02:00:36] HITS file was successfully produced:
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas 703778479 Dec  3 01:58 shared/HITS.pool.root.1
[2025-12-03 02:00:36]  *** Contents of shared directory: ***
[2025-12-03 02:00:36] total 1062140
[2025-12-03 02:00:36] -rw-r--r--. 2 boincer umatlas 376577342 Dec  2 14:24 ATLAS.root_0
[2025-12-03 02:00:36] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 14:24 start_atlas.sh
[2025-12-03 02:00:36] -rw-r--r--. 2 boincer umatlas    590134 Dec  2 14:24 input.tar.gz
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas 703778479 Dec  3 01:58 HITS.pool.root.1
[2025-12-03 02:00:36] -rw-------. 1 boincer umatlas   6656000 Dec  3 02:00 result.tar.gz
02:00:37 (632753): run_atlas exited; CPU time 122556.438515
02:00:37 (632753): called boinc_finish(0)

</stderr_txt>
]]>

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