Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-02 20:02:45 (167367): vboxwrapper version 26210
2025-12-02 20:02:45 (167367): BOINC client version: 8.2.5
2025-12-02 20:02:45 (167367): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-12-02 20:02:45 (167367): Successfully copied 'init_data.xml' to the shared directory.
2025-12-02 20:02:45 (167367): Create VM. (boinc_c4905280f17c8302, slot#9)
2025-12-02 20:02:45 (167367): Setting Memory Size for VM. (4800MB)
2025-12-02 20:02:45 (167367): Setting CPU Count for VM. (8)
2025-12-02 20:02:46 (167367): Setting Chipset Options for VM.
2025-12-02 20:02:46 (167367): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-02 20:02:46 (167367): Setting Boot Options for VM.
2025-12-02 20:02:46 (167367): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-02 20:02:46 (167367): Enabling VM Network Access.
2025-12-02 20:02:46 (167367): Disabling USB Support for VM.
2025-12-02 20:02:46 (167367): Disabling COM Port Support for VM.
2025-12-02 20:02:46 (167367): Disabling LPT Port Support for VM.
2025-12-02 20:02:46 (167367): Disabling Audio Support for VM.
2025-12-02 20:02:46 (167367): Disabling Clipboard Support for VM.
2025-12-02 20:02:46 (167367): Disabling Drag and Drop Support for VM.
2025-12-02 20:02:46 (167367): Adding storage controller(s) to VM.
2025-12-02 20:02:46 (167367): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-02 20:02:46 (167367): Adding VirtualBox Guest Additions to VM.
2025-12-02 20:02:46 (167367): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-02 20:02:46 (167367): forwarding host port 40315 to guest port 80
2025-12-02 20:02:46 (167367): Enabling remote desktop for VM.
2025-12-02 20:02:46 (167367): Enabling shared directory for VM.
2025-12-02 20:02:46 (167367): Starting VM using VBoxManage interface. (boinc_c4905280f17c8302, slot#9)
2025-12-02 20:02:47 (167367): Successfully started VM. (PID = '167813')
2025-12-02 20:02:47 (167367): Reporting VM Process ID to BOINC.
2025-12-02 20:02:47 (167367): Guest Log: BIOS: VirtualBox 7.2.2
2025-12-02 20:02:47 (167367): Guest Log: CPUID EDX: 0x178bfbff
2025-12-02 20:02:47 (167367): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-02 20:02:47 (167367): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-02 20:02:47 (167367): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-02 20:02:47 (167367): Detected: Web Application Enabled (http://localhost:40315)
2025-12-02 20:02:47 (167367): Detected: Remote Desktop Enabled (localhost:47815)
2025-12-02 20:02:47 (167367): Preference change detected
2025-12-02 20:02:47 (167367): Setting CPU throttle for VM. (100%)
2025-12-02 20:02:47 (167367): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-02 20:02:49 (167367): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-02 20:02:49 (167367): Guest Log: BIOS: Booting from Hard Disk...
2025-12-02 20:02:52 (167367): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-02 20:02:52 (167367): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-02 20:02:52 (167367): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-02 20:03:00 (167367): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-02 20:03:00 (167367): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-02 20:03:05 (167367): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-02 20:03:05 (167367): Guest Log: 00:00:00.000118 main     Log opened 2025-12-02T19:03:03.027545000Z
2025-12-02 20:03:05 (167367): Guest Log: 00:00:00.000191 main     OS Product: Linux
2025-12-02 20:03:05 (167367): Guest Log: 00:00:00.000203 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-02 20:03:05 (167367): Guest Log: 00:00:00.000212 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-02 20:03:05 (167367): Guest Log: 00:00:00.000226 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-02 20:03:05 (167367): Guest Log: 00:00:00.000226 main     Process ID: 1385
2025-12-02 20:03:05 (167367): Guest Log: 00:00:00.000226 main     Package type: LINUX_64BITS_GENERIC
2025-12-02 20:03:05 (167367): Guest Log: 00:00:00.005420 main     5.2.32 r132073 started. Verbose level = 0
2025-12-02 20:03:05 (167367): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-02 20:03:05 (167367): Guest Log: [INFO] Mounting shared directory
2025-12-02 20:03:05 (167367): Guest Log: [INFO] Checking for init_data.xml
2025-12-02 20:03:09 (167367): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-02 20:03:09 (167367): Guest Log: [INFO] Detected branch: prod
2025-12-02 20:03:10 (167367): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-02 20:03:10 (167367): Guest Log: Copying input files
2025-12-02 20:03:11 (167367): Guest Log: Copied input files into RunAtlas.
2025-12-02 20:03:11 (167367): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-02 20:03:11 (167367): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-02 20:03:11 (167367): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-02 20:03:11 (167367): Guest Log: Further information can be found at the LHC@home message board.
2025-12-02 20:04:14 (167367): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-02 20:04:15 (167367): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-02 20:04:15 (167367): Guest Log: 2.6.3.0 1660 1 30308 153566 3 1 3120538 4096000 0 65024 0 0 n/a 1292 438 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-12-02 20:04:16 (167367): Guest Log: copied the webapp to /var/www
2025-12-02 20:04:16 (167367): Guest Log: ATHENA_PROC_NUMBER=8
2025-12-02 20:04:16 (167367): Guest Log: ATHENA_CORE_NUMBER=8
2025-12-02 20:04:16 (167367): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-02 20:04:16 (167367): Guest Log:  *** Starting ATLAS job. (PandaID=6905252320 taskID=47538113) ***
2025-12-02 21:41:48 (167367): Status Report: Elapsed Time: '6000.000000'
2025-12-02 21:41:48 (167367): Status Report: CPU Time: '41778.210000'
2025-12-02 23:20:50 (167367): Status Report: Elapsed Time: '12000.000000'
2025-12-02 23:20:50 (167367): Status Report: CPU Time: '80641.770000'
2025-12-02 23:30:29 (167367): Guest Log:  *** Job finished ***
2025-12-02 23:30:29 (167367): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:10,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:10,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:22,239 | INFO     | [monitor] cgroup control has ended
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:23,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768534300480)>', '<ExcThread(monitor, started 139768315774720)>']
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:23,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:23,626 | INFO     | [monitor] control thread has ended
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,299 | INFO     | all workflow threads have been joined
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,299 | INFO     | end of generic workflow (traces error code: 0)
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,299 | INFO     | traces error code: 0
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,299 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,372 [wrapper] ==== pilot stdout END ====
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,375 [wrapper] ==== wrapper stdout RESUME ====
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,377 [wrapper] pilotpid: 6089
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,380 [wrapper] Pilot exit status: 0
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,389 [wrapper] pandaids: 6905252320
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,408 [wrapper] cleanup supervisor_pilot 13781 6090
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,410 [wrapper] Test setup, not cleaning
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,415 [wrapper] apfmon messages muted
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,418 [wrapper] ==== wrapper stdout END ====
2025-12-02 23:30:29 (167367): Guest Log: 2025-12-02 22:30:28,421 [wrapper] ==== wrapper stderr END ====
2025-12-02 23:30:29 (167367): Guest Log:  *** Error codes and diagnostics ***
2025-12-02 23:30:29 (167367): Guest Log:     "exeErrorCode": 0,
2025-12-02 23:30:29 (167367): Guest Log:     "exeErrorDiag": "",
2025-12-02 23:30:29 (167367): Guest Log:     "pilotErrorCode": 0,
2025-12-02 23:30:29 (167367): Guest Log:     "pilotErrorDiag": "",
2025-12-02 23:30:29 (167367): Guest Log:  *** Listing of results directory ***
2025-12-02 23:30:29 (167367): Guest Log: total 703056
2025-12-02 23:30:29 (167367): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 30 00:16 pilot3.tar.gz
2025-12-02 23:30:29 (167367): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 30 00:19 runpilot2-wrapper.sh
2025-12-02 23:30:29 (167367): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 30 00:24 queuedata.json
2025-12-02 23:30:29 (167367): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Dec  2 19:03 start_atlas.sh
2025-12-02 23:30:29 (167367): Guest Log: -rw-r--r--. 1 atlas atlas    590134 Dec  2 19:03 input.tar.gz
2025-12-02 23:30:29 (167367): Guest Log: -rw-r--r--. 1 atlas atlas      9454 Dec  2 19:03 init_data.xml
2025-12-02 23:30:29 (167367): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec  2 19:03 EVNT.47528871._000104.pool.root.1 -> /data/./ATLAS.root_0
2025-12-02 23:30:29 (167367): Guest Log: -rw-r--r--. 1 atlas atlas      2880 Dec  2 19:04 pandaJob.out
2025-12-02 23:30:29 (167367): Guest Log: -rw-------. 1 atlas atlas    988850 Dec  2 19:05 agis_schedconf.cvmfs.json
2025-12-02 23:30:29 (167367): Guest Log: drwx------. 5 atlas atlas      4096 Dec  2 19:05 pilot3
2025-12-02 23:30:29 (167367): Guest Log: -rw-------. 1 atlas atlas 709465397 Dec  2 22:29 HITS.47538113._002649.pool.root.1
2025-12-02 23:30:29 (167367): Guest Log: -rw-------. 1 atlas atlas      1034 Dec  2 22:29 memory_monitor_summary.json
2025-12-02 23:30:29 (167367): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec  2 22:29 agis_ddmendpoints.agis.ALL.json
2025-12-02 23:30:29 (167367): Guest Log: -rw-------. 1 atlas atlas   1633956 Dec  2 22:29 log.47538113._002649.job.log.tgz.1
2025-12-02 23:30:29 (167367): Guest Log: -rw-------. 1 atlas atlas     27529 Dec  2 22:29 heartbeat.json
2025-12-02 23:30:29 (167367): Guest Log: -rw-------. 1 atlas atlas        95 Dec  2 22:30 pilot_heartbeat.json
2025-12-02 23:30:29 (167367): Guest Log: -rw-------. 1 atlas atlas      4877 Dec  2 22:30 pilotlog.txt
2025-12-02 23:30:29 (167367): Guest Log: -rw-------. 1 atlas atlas   1659532 Dec  2 22:30 log.47538113._002649.job.log.1
2025-12-02 23:30:29 (167367): Guest Log: -rw-------. 1 atlas atlas       353 Dec  2 22:30 output.list
2025-12-02 23:30:29 (167367): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec  2 22:30 runtime_log
2025-12-02 23:30:29 (167367): Guest Log: -rw-------. 1 atlas atlas   3328000 Dec  2 22:30 result.tar.gz
2025-12-02 23:30:29 (167367): Guest Log: -rw-r--r--. 1 atlas atlas      8795 Dec  2 22:30 runtime_log.err
2025-12-02 23:30:29 (167367): Guest Log: -rw-------. 1 atlas atlas       674 Dec  2 22:30 p5oLDmqKkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmB8LKDmo9XzDo.diag
2025-12-02 23:30:29 (167367): Guest Log: Looking for outputfile HITS.47538113._002649.pool.root.1
2025-12-02 23:30:29 (167367): Guest Log: HITS file was successfully produced
2025-12-02 23:30:29 (167367): Guest Log: -rw-------. 1 atlas atlas 709465397 Dec  2 22:29 /home/atlas/RunAtlas/HITS.47538113._002649.pool.root.1
2025-12-02 23:30:29 (167367): Guest Log: Successfully finished the ATLAS job!
2025-12-02 23:30:29 (167367): Guest Log: Copying the results back to the shared directory!
2025-12-02 23:30:29 (167367): Guest Log:  *** Contents of shared directory: ***
2025-12-02 23:30:29 (167367): Guest Log: total 372844
2025-12-02 23:30:29 (167367): Guest Log: -rw-r--r--. 1 root root 377831429 Dec  2 19:02 ATLAS.root_0
2025-12-02 23:30:29 (167367): Guest Log: -rw-r--r--. 1 root root      9454 Dec  2 19:02 init_data.xml
2025-12-02 23:30:29 (167367): Guest Log: -rw-r--r--. 1 root root    590134 Dec  2 19:02 input.tar.gz
2025-12-02 23:30:29 (167367): Guest Log: -rw-r--r--. 1 root root   3328000 Dec  2 22:30 result.tar.gz
2025-12-02 23:30:29 (167367): Guest Log: -rw-r--r--. 1 root root     15847 Dec  2 19:02 start_atlas.sh
2025-12-02 23:30:29 (167367): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-02 23:30:29 (167367): VM Completion File Detected.
2025-12-02 23:30:29 (167367): Powering off VM.
2025-12-02 23:30:29 (167367): Successfully stopped VM.
2025-12-02 23:30:29 (167367): Deregistering VM. (boinc_c4905280f17c8302, slot#9)
2025-12-02 23:30:29 (167367): Removing network bandwidth throttle group from VM.
2025-12-02 23:30:29 (167367): Removing VM from VirtualBox.
2025-12-02 23:30:34 (167367): called boinc_finish(0)

</stderr_txt>
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