Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:58:56 (2097803): wrapper (7.7.26015): starting
16:58:56 (2097803): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 16:58:56] Arguments: --nthreads 8
[2025-12-02 16:58:56] Threads: 8
[2025-12-02 16:58:56] Checking for CVMFS
[2025-12-02 16:58:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 16:58:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 16:58:56] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 16:58:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 16:58:56] 2.12.7.0 135827 3207 67232 153574 2 101 3682796 4096000 2814 130560 0 6363069 99.811 909254 496 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-02 16:58:56] CVMFS is ok
[2025-12-02 16:58:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 16:58:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 16:58:56] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-02 16:58:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-02 16:58:56] Further information can be found at the LHC@home message board.
[2025-12-02 16:58:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 16:58:56] Checking for apptainer binary...
[2025-12-02 16:58:56] apptainer is not installed, using version from CVMFS
[2025-12-02 16:58:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 16:58:56] X570UD
[2025-12-02 16:58:56] apptainer works
[2025-12-02 16:58:56] Set ATHENA_PROC_NUMBER=8
[2025-12-02 16:58:56] Set ATHENA_CORE_NUMBER=8
[2025-12-02 16:58:56] Starting ATLAS job with PandaID=6905332218
[2025-12-02 16:58:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 21:40:50]  *** The last 200 lines of the pilot log: ***
[2025-12-02 21:40:50] 2025-12-03 04:40:16,992 | INFO     | time since job start (16869s) is within the limit (172800.0s)
[2025-12-02 21:40:50] 2025-12-03 04:40:17,021 | INFO     | monitor loop #1254: job 0:6905332218 is in state 'finished'
[2025-12-02 21:40:50] 2025-12-03 04:40:17,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 21:40:50] 2025-12-03 04:40:18,151 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 21:40:50] 2025-12-03 04:40:18,155 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3908.108625
[2025-12-02 21:40:50] 2025-12-03 04:40:18,159 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6905332218/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 21:40:50] 2025-12-03 04:40:18,159 | INFO     | extracted standard info from prmon json
[2025-12-02 21:40:50] 2025-12-03 04:40:18,159 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 21:40:50] 2025-12-03 04:40:18,159 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 21:40:50] 2025-12-03 04:40:18,162 | INFO     | fitting pss+swap vs Time
[2025-12-02 21:40:50] 2025-12-03 04:40:18,163 | INFO     | sum of square deviations: 6519284983.402166
[2025-12-02 21:40:50] 2025-12-03 04:40:18,164 | INFO     | sum of deviations: 127683394576.71739
[2025-12-02 21:40:50] 2025-12-03 04:40:18,164 | INFO     | mean x: 1764728357.576087
[2025-12-02 21:40:50] 2025-12-03 04:40:18,164 | INFO     | mean y: 3364728.4420289854
[2025-12-02 21:40:50] 2025-12-03 04:40:18,165 | INFO     | intersect: -34559705880.49469
[2025-12-02 21:40:50] 2025-12-03 04:40:18,165 | INFO     | chi2: 3.7044876333029393
[2025-12-02 21:40:50] 2025-12-03 04:40:18,165 | INFO     | sum of square deviations: 6171359283.372707
[2025-12-02 21:40:50] 2025-12-03 04:40:18,166 | INFO     | sum of deviations: 197460961094.66055
[2025-12-02 21:40:50] 2025-12-03 04:40:18,167 | INFO     | mean x: 1764728205.0774908
[2025-12-02 21:40:50] 2025-12-03 04:40:18,167 | INFO     | mean y: 3395167.2066420666
[2025-12-02 21:40:50] 2025-12-03 04:40:18,167 | INFO     | intersect: -56461463131.40421
[2025-12-02 21:40:50] 2025-12-03 04:40:18,167 | INFO     | chi2: 2.0659136021951525
[2025-12-02 21:40:50] 2025-12-03 04:40:18,167 | INFO     | current chi2=2.0659136021951525 (change=44.23213662200368 %)
[2025-12-02 21:40:50] 2025-12-03 04:40:18,167 | INFO     | sum of square deviations: 5836038470.842076
[2025-12-02 21:40:50] 2025-12-03 04:40:18,169 | INFO     | sum of deviations: 190779495166.94736
[2025-12-02 21:40:50] 2025-12-03 04:40:18,169 | INFO     | mean x: 1764728052.5789473
[2025-12-02 21:40:50] 2025-12-03 04:40:18,169 | INFO     | mean y: 3392128.312030075
[2025-12-02 21:40:50] 2025-12-03 04:40:18,169 | INFO     | intersect: -57685385740.45061
[2025-12-02 21:40:50] 2025-12-03 04:40:18,169 | INFO     | chi2: 2.0656217749180175
[2025-12-02 21:40:50] 2025-12-03 04:40:18,169 | INFO     | current chi2=2.0656217749180175 (change=0.014125821952330246 %)
[2025-12-02 21:40:50] 2025-12-03 04:40:18,169 | INFO     | right removable region: 265
[2025-12-02 21:40:50] 2025-12-03 04:40:18,169 | INFO     | sum of square deviations: 6171346473.372707
[2025-12-02 21:40:50] 2025-12-03 04:40:18,171 | INFO     | sum of deviations: 51581239859.413284
[2025-12-02 21:40:50] 2025-12-03 04:40:18,171 | INFO     | mean x: 1764728510.0774908
[2025-12-02 21:40:50] 2025-12-03 04:40:18,171 | INFO     | mean y: 3397871.3136531366
[2025-12-02 21:40:50] 2025-12-03 04:40:18,171 | INFO     | intersect: -14746525011.448252
[2025-12-02 21:40:50] 2025-12-03 04:40:18,171 | INFO     | chi2: 1.6920283044841378
[2025-12-02 21:40:50] 2025-12-03 04:40:18,171 | INFO     | current chi2=1.6920283044841378 (change=54.32490341517169 %)
[2025-12-02 21:40:50] 2025-12-03 04:40:18,171 | INFO     | sum of square deviations: 5836012850.842076
[2025-12-02 21:40:50] 2025-12-03 04:40:18,173 | INFO     | sum of deviations: 43586095932.105255
[2025-12-02 21:40:50] 2025-12-03 04:40:18,173 | INFO     | mean x: 1764728662.5789473
[2025-12-02 21:40:50] 2025-12-03 04:40:18,173 | INFO     | mean y: 3401498.590225564
[2025-12-02 21:40:50] 2025-12-03 04:40:18,173 | INFO     | intersect: -13176424308.37375
[2025-12-02 21:40:50] 2025-12-03 04:40:18,173 | INFO     | chi2: 1.6879848003340938
[2025-12-02 21:40:50] 2025-12-03 04:40:18,173 | INFO     | current chi2=1.6879848003340938 (change=0.23897378899206584 %)
[2025-12-02 21:40:50] 2025-12-03 04:40:18,173 | INFO     | left removable region: 20
[2025-12-02 21:40:50] 2025-12-03 04:40:18,173 | INFO     | sum of square deviations: 4560052212.367331
[2025-12-02 21:40:50] 2025-12-03 04:40:18,175 | INFO     | sum of deviations: 95451165084.85716
[2025-12-02 21:40:50] 2025-12-03 04:40:18,175 | INFO     | mean x: 1764728632.0816326
[2025-12-02 21:40:50] 2025-12-03 04:40:18,175 | INFO     | mean y: 3436728.4571428574
[2025-12-02 21:40:50] 2025-12-03 04:40:18,175 | INFO     | intersect: -36935921889.84042
[2025-12-02 21:40:50] 2025-12-03 04:40:18,175 | INFO     | chi2: 0.012565293694697444
[2025-12-02 21:40:50] 2025-12-03 04:40:18,175 | INFO     | current memory leak: 20.93 B/s (using 245 data points, chi2=0.01)
[2025-12-02 21:40:50] 2025-12-03 04:40:18,175 | INFO     | could have reported an average CPU frequency of 4085 MHz (13 samples)
[2025-12-02 21:40:50] 2025-12-03 04:40:18,175 | INFO     | ..............................
[2025-12-02 21:40:50] 2025-12-03 04:40:18,175 | INFO     | . Timing measurements:
[2025-12-02 21:40:50] 2025-12-03 04:40:18,176 | INFO     | . get job = 0 s
[2025-12-02 21:40:50] 2025-12-03 04:40:18,176 | INFO     | . initial setup = 5 s
[2025-12-02 21:40:50] 2025-12-03 04:40:18,176 | INFO     | . payload setup = 6 s
[2025-12-02 21:40:50] 2025-12-03 04:40:18,176 | INFO     | . stage-in = 0 s
[2025-12-02 21:40:50] 2025-12-03 04:40:18,176 | INFO     | . payload execution = 16837 s
[2025-12-02 21:40:50] 2025-12-03 04:40:18,176 | INFO     | . stage-out = 2 s
[2025-12-02 21:40:50] 2025-12-03 04:40:18,176 | INFO     | . log creation = 0 s
[2025-12-02 21:40:50] 2025-12-03 04:40:18,176 | INFO     | ..............................
[2025-12-02 21:40:50] 2025-12-03 04:40:18,237 | INFO     | 
[2025-12-02 21:40:50] 2025-12-03 04:40:18,237 | INFO     | job summary report
[2025-12-02 21:40:50] 2025-12-03 04:40:18,237 | INFO     | --------------------------------------------------
[2025-12-02 21:40:50] 2025-12-03 04:40:18,237 | INFO     | PanDA job id: 6905332218
[2025-12-02 21:40:50] 2025-12-03 04:40:18,237 | INFO     | task id: 47530725
[2025-12-02 21:40:50] 2025-12-03 04:40:18,237 | INFO     | errors: (none)
[2025-12-02 21:40:50] 2025-12-03 04:40:18,237 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 21:40:50] 2025-12-03 04:40:18,237 | INFO     | pilot state: finished 
[2025-12-02 21:40:50] 2025-12-03 04:40:18,237 | INFO     | transexitcode: 0
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | exeerrorcode: 0
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | exeerrordiag: 
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | exitcode: 0
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | exitmsg: OK
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | cpuconsumptiontime: 129887 s
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | nevents: 1000
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | neventsw: 0
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | pid: 2108964
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | pgrp: 2108964
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | corecount: 8
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | event service: False
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | sizes: {0: 2284405, 3: 2284667, 11: 2284695, 16848: 2336888, 16852: 2345952, 16858: 2346142}
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | --------------------------------------------------
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | 
[2025-12-02 21:40:50] 2025-12-03 04:40:18,238 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-12-02 21:40:50] 2025-12-03 04:40:18,254 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,254 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,254 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,254 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 21:40:50] 2025-12-03 04:40:18,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,255 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 21:40:50] 2025-12-03 04:40:18,255 | INFO     | job 6905332218 has completed (purged errors)
[2025-12-02 21:40:50] 2025-12-03 04:40:18,255 | INFO     | overall cleanup function is called
[2025-12-02 21:40:50] 2025-12-03 04:40:19,267 | INFO     | --- collectZombieJob: --- 10, [2108964]
[2025-12-02 21:40:50] 2025-12-03 04:40:19,267 | INFO     | zombie collector waiting for pid 2108964
[2025-12-02 21:40:50] 2025-12-03 04:40:19,267 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 21:40:50] 2025-12-03 04:40:19,267 | INFO     | collected zombie processes
[2025-12-02 21:40:50] 2025-12-03 04:40:19,267 | INFO     | will attempt to kill all subprocesses of pid=2108964
[2025-12-02 21:40:50] 2025-12-03 04:40:19,389 | INFO     | process IDs to be killed: [2108964] (in reverse order)
[2025-12-02 21:40:50] 2025-12-03 04:40:19,441 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 21:40:50] 2025-12-03 04:40:19,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 21:40:50] 2025-12-03 04:40:19,445 | INFO     | did not find any defunct processes belonging to 2108964
[2025-12-02 21:40:50] 2025-12-03 04:40:19,448 | INFO     | did not find any defunct processes belonging to 2108964
[2025-12-02 21:40:50] 2025-12-03 04:40:19,448 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 21:40:50] 2025-12-03 04:40:19,448 | INFO     | ready for new job
[2025-12-02 21:40:50] 2025-12-03 04:40:19,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 21:40:50] 2025-12-03 04:40:19,450 | INFO     | ***************************************
[2025-12-02 21:40:50] 2025-12-03 04:40:19,450 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 21:40:50] 2025-12-03 04:40:19,450 | INFO     | ***************************************
[2025-12-02 21:40:50] 2025-12-03 04:40:19,450 | INFO     | 
[2025-12-02 21:40:50] 2025-12-03 04:40:19,452 | INFO     | architecture information:
[2025-12-02 21:40:50] 2025-12-03 04:40:19,452 | INFO     | executing command: cat /etc/os-release
[2025-12-02 21:40:50] 2025-12-03 04:40:19,465 | INFO     | cat /etc/os-release:
[2025-12-02 21:40:50] NAME="CentOS Linux"
[2025-12-02 21:40:50] VERSION="7 (Core)"
[2025-12-02 21:40:50] ID="centos"
[2025-12-02 21:40:50] ID_LIKE="rhel fedora"
[2025-12-02 21:40:50] VERSION_ID="7"
[2025-12-02 21:40:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 21:40:50] ANSI_COLOR="0;31"
[2025-12-02 21:40:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 21:40:50] HOME_URL="https://www.centos.org/"
[2025-12-02 21:40:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 21:40:50] 
[2025-12-02 21:40:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 21:40:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 21:40:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 21:40:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 21:40:50] 
[2025-12-02 21:40:50] 2025-12-03 04:40:19,465 | INFO     | ***************************************
[2025-12-02 21:40:50] 2025-12-03 04:40:19,967 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-12-02 21:40:50] 2025-12-03 04:40:19,982 | INFO     | sufficient remaining disk space (170690347008 B)
[2025-12-02 21:40:50] 2025-12-03 04:40:19,983 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 21:40:50] 2025-12-03 04:40:19,983 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 21:40:50] 2025-12-03 04:40:19,983 | INFO     | update_server=False
[2025-12-02 21:40:50] 2025-12-03 04:40:19,983 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 21:40:50] 2025-12-03 04:40:19,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 21:40:50] 2025-12-03 04:40:19,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 21:40:50] 2025-12-03 04:40:20,197 | INFO     | all data control threads have been joined
[2025-12-02 21:40:50] 2025-12-03 04:40:20,498 | INFO     | all payload control threads have been joined
[2025-12-02 21:40:50] 2025-12-03 04:40:20,526 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 21:40:50] 2025-12-03 04:40:20,526 | INFO     | aborting loop
[2025-12-02 21:40:50] 2025-12-03 04:40:20,899 | INFO     | all job control threads have been joined
[2025-12-02 21:40:50] 2025-12-03 04:40:20,988 | INFO     | [job] retrieve thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:20,988 | INFO     | [job] queue monitor thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:21,202 | INFO     | [data] control thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:21,276 | INFO     | [job] validate thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:21,354 | INFO     | [payload] failed_post thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:21,378 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:21,475 | INFO     | [data] copytool_in thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:21,497 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:21,503 | INFO     | [payload] control thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:21,531 | INFO     | [job] job monitor thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:21,720 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:21,904 | INFO     | [job] control thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:21,978 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:21,988 | INFO     | [data] copytool_out thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:22,236 | INFO     | [payload] validate_post thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:22,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 21:40:50] 2025-12-03 04:40:26,707 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 21:40:50] 2025-12-03 04:40:34,539 | INFO     | [monitor] cgroup control has ended
[2025-12-02 21:40:50] 2025-12-03 04:40:35,861 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128078404015936)>', '<ExcThread(monitor, started 128077711525632)>']
[2025-12-02 21:40:50] 2025-12-03 04:40:40,886 | INFO     | all workflow threads have been joined
[2025-12-02 21:40:50] 2025-12-03 04:40:40,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 21:40:50] 2025-12-03 04:40:40,886 | INFO     | traces error code: 0
[2025-12-02 21:40:50] 2025-12-03 04:40:40,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 21:40:50] 2025-12-03 04:40:50,191 | INFO     | PID=2101646 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 21:40:50] 2025-12-03 04:40:50,191 | INFO     | .. there are 4 such processes running
[2025-12-02 21:40:50] 2025-12-03 04:40:50,192 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 21:40:50] 2025-12-03 04:40:50,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 21:40:50] 2025-12-03 04:40:50,192 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 21:40:50] 2025-12-03 04:40:50,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 21:40:50] 2025-12-03 04:40:50,192 | INFO     | [monitor] control thread has ended
[2025-12-02 21:40:50] 2025-12-03 04:40:50,266 [wrapper] ==== pilot stdout END ====
[2025-12-02 21:40:50] 2025-12-03 04:40:50,268 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 21:40:50] 2025-12-03 04:40:50,270 [wrapper] pilotpid: 2101646
[2025-12-02 21:40:50] 2025-12-03 04:40:50,271 [wrapper] Pilot exit status: 0
[2025-12-02 21:40:50] 2025-12-03 04:40:50,277 [wrapper] pandaids: 6905332218
[2025-12-02 21:40:50] 2025-12-03 04:40:50,306 [wrapper] cleanup supervisor_pilot 2261667 2101647
[2025-12-02 21:40:50] 2025-12-03 04:40:50,308 [wrapper] Test setup, not cleaning
[2025-12-02 21:40:50] 2025-12-03 04:40:50,310 [wrapper] apfmon messages muted
[2025-12-02 21:40:50] 2025-12-03 04:40:50,312 [wrapper] ==== wrapper stdout END ====
[2025-12-02 21:40:50] 2025-12-03 04:40:50,314 [wrapper] ==== wrapper stderr END ====
[2025-12-02 21:40:50]  *** Error codes and diagnostics ***
[2025-12-02 21:40:50]     "exeErrorCode": 0,
[2025-12-02 21:40:50]     "exeErrorDiag": "",
[2025-12-02 21:40:50]     "pilotErrorCode": 0,
[2025-12-02 21:40:50]     "pilotErrorDiag": "",
[2025-12-02 21:40:50]  *** Listing of results directory ***
[2025-12-02 21:40:50] total 1070868
[2025-12-02 21:40:50] -rw-r--r-- 1 boinc boinc    576529 Nov 29 17:16 pilot3.tar.gz
[2025-12-02 21:40:50] -rwx------ 1 boinc boinc     36292 Nov 29 17:18 runpilot2-wrapper.sh
[2025-12-02 21:40:50] -rw-r--r-- 1 boinc boinc      5112 Nov 29 17:18 queuedata.json
[2025-12-02 21:40:50] -rw-r--r-- 1 boinc boinc       100 Dec  2 16:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 21:40:50] -rwxr-xr-x 1 boinc boinc      7986 Dec  2 16:58 run_atlas
[2025-12-02 21:40:50] -rw-r--r-- 1 boinc boinc       105 Dec  2 16:58 job.xml
[2025-12-02 21:40:50] -rw-r--r-- 1 boinc boinc      9767 Dec  2 16:58 init_data.xml
[2025-12-02 21:40:50] -rw-r--r-- 2 boinc boinc 378365033 Dec  2 16:58 EVNT.47530720._000045.pool.root.1
[2025-12-02 21:40:50] -rw-r--r-- 2 boinc boinc     15847 Dec  2 16:58 start_atlas.sh
[2025-12-02 21:40:50] drwxrwx--x 2 boinc boinc      4096 Dec  2 16:58 shared
[2025-12-02 21:40:50] -rw-r--r-- 2 boinc boinc    590132 Dec  2 16:58 input.tar.gz
[2025-12-02 21:40:50] -rw-r--r-- 1 boinc boinc         0 Dec  2 16:58 boinc_lockfile
[2025-12-02 21:40:50] -rw-r--r-- 1 boinc boinc      2877 Dec  2 16:58 pandaJob.out
[2025-12-02 21:40:50] -rw------- 1 boinc boinc    989284 Dec  2 16:59 agis_schedconf.cvmfs.json
[2025-12-02 21:40:50] drwx------ 5 boinc boinc      4096 Dec  2 16:59 pilot3
[2025-12-02 21:40:50] -rw-r--r-- 1 boinc boinc       533 Dec  2 21:34 boinc_task_state.xml
[2025-12-02 21:40:50] -rw------- 1 boinc boinc 706018285 Dec  2 21:39 HITS.47530725._001892.pool.root.1
[2025-12-02 21:40:50] -rw------- 1 boinc boinc      1034 Dec  2 21:40 memory_monitor_summary.json
[2025-12-02 21:40:50] -rw------- 1 boinc boinc   1516240 Dec  2 21:40 agis_ddmendpoints.agis.ALL.json
[2025-12-02 21:40:50] -rw------- 1 boinc boinc   1679135 Dec  2 21:40 log.47530725._001892.job.log.tgz.1
[2025-12-02 21:40:50] -rw------- 1 boinc boinc     28177 Dec  2 21:40 heartbeat.json
[2025-12-02 21:40:50] -rw-r--r-- 1 boinc boinc      8192 Dec  2 21:40 boinc_mmap_file
[2025-12-02 21:40:50] -rw-r--r-- 1 boinc boinc        29 Dec  2 21:40 wrapper_checkpoint.txt
[2025-12-02 21:40:50] -rw------- 1 boinc boinc        95 Dec  2 21:40 pilot_heartbeat.json
[2025-12-02 21:40:50] -rw------- 1 boinc boinc       822 Dec  2 21:40 pilotlog.txt
[2025-12-02 21:40:50] -rw------- 1 boinc boinc   2440146 Dec  2 21:40 log.47530725._001892.job.log.1
[2025-12-02 21:40:50] -rw------- 1 boinc boinc       353 Dec  2 21:40 output.list
[2025-12-02 21:40:50] -rw-r--r-- 1 boinc boinc       620 Dec  2 21:40 runtime_log
[2025-12-02 21:40:50] -rw------- 1 boinc boinc   4157440 Dec  2 21:40 result.tar.gz
[2025-12-02 21:40:50] -rw-r--r-- 1 boinc boinc      8915 Dec  2 21:40 runtime_log.err
[2025-12-02 21:40:50] -rw------- 1 boinc boinc       661 Dec  2 21:40 3mEMDmyJkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUJPKDmHkXIFn.diag
[2025-12-02 21:40:50] -rw-r--r-- 1 boinc boinc     21531 Dec  2 21:40 stderr.txt
[2025-12-02 21:40:50] HITS file was successfully produced:
[2025-12-02 21:40:50] -rw------- 1 boinc boinc 706018285 Dec  2 21:39 shared/HITS.pool.root.1
[2025-12-02 21:40:50]  *** Contents of shared directory: ***
[2025-12-02 21:40:50] total 1063636
[2025-12-02 21:40:50] -rw-r--r-- 2 boinc boinc 378365033 Dec  2 16:58 ATLAS.root_0
[2025-12-02 21:40:50] -rw-r--r-- 2 boinc boinc     15847 Dec  2 16:58 start_atlas.sh
[2025-12-02 21:40:50] -rw-r--r-- 2 boinc boinc    590132 Dec  2 16:58 input.tar.gz
[2025-12-02 21:40:50] -rw------- 1 boinc boinc 706018285 Dec  2 21:39 HITS.pool.root.1
[2025-12-02 21:40:50] -rw------- 1 boinc boinc   4157440 Dec  2 21:40 result.tar.gz
21:40:51 (2097803): run_atlas exited; CPU time 129837.616788
21:40:51 (2097803): called boinc_finish(0)

</stderr_txt>
]]>

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