Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:12:28 (958008): wrapper (7.7.26015): starting
16:12:28 (958008): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 16:12:28] Arguments: --nthreads 8
[2025-12-02 16:12:28] Threads: 8
[2025-12-02 16:12:28] Checking for CVMFS
[2025-12-02 16:12:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 16:12:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 16:12:28] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 16:12:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 16:12:29] 2.13.2.0 6869 45790 167336 153568 1 122 35523483 40960001 21528 16776704 0 101598770 99.774 55906275 41299 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 16:12:29] CVMFS is ok
[2025-12-02 16:12:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 16:12:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 16:12:29] Further information can be found at the LHC@home message board.
[2025-12-02 16:12:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 16:12:29] Checking for apptainer binary...
[2025-12-02 16:12:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 16:12:29] Running /usr/bin/apptainer --version
[2025-12-02 16:12:29] apptainer version 1.4.4-1.el9
[2025-12-02 16:12:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 16:12:29] c-212-13.aglt2.org
[2025-12-02 16:12:29] apptainer works
[2025-12-02 16:12:29] Set ATHENA_PROC_NUMBER=8
[2025-12-02 16:12:29] Set ATHENA_CORE_NUMBER=8
[2025-12-02 16:12:29] Starting ATLAS job with PandaID=6904565541
[2025-12-02 16:12:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 22:02:24]  *** The last 200 lines of the pilot log: ***
[2025-12-02 22:02:25] 2025-12-03 03:01:16,154 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 22:02:25] 2025-12-03 03:01:16,166 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3037.670625
[2025-12-02 22:02:25] 2025-12-03 03:01:16,197 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6904565541/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 22:02:25] 2025-12-03 03:01:16,198 | INFO     | extracted standard info from prmon json
[2025-12-02 22:02:25] 2025-12-03 03:01:16,198 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 22:02:25] 2025-12-03 03:01:16,198 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 22:02:25] 2025-12-03 03:01:16,202 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-02 22:02:25] 2025-12-03 03:01:16,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-02 22:02:25] 2025-12-03 03:01:16,207 | INFO     | fitting pss+swap vs Time
[2025-12-02 22:02:25] 2025-12-03 03:01:16,208 | INFO     | sum of square deviations: 12403918598.33041
[2025-12-02 22:02:25] 2025-12-03 03:01:16,217 | INFO     | sum of deviations: -16447273246.663752
[2025-12-02 22:02:25] 2025-12-03 03:01:16,218 | INFO     | mean x: 1764720394.5584795
[2025-12-02 22:02:25] 2025-12-03 03:01:16,218 | INFO     | mean y: 2618770.1081871344
[2025-12-02 22:02:25] 2025-12-03 03:01:16,218 | INFO     | intersect: 2342592086.0545187
[2025-12-02 22:02:25] 2025-12-03 03:01:16,218 | INFO     | chi2: 2.0486656011758937
[2025-12-02 22:02:25] 2025-12-03 03:01:16,219 | INFO     | sum of square deviations: 11867812320.813044
[2025-12-02 22:02:25] 2025-12-03 03:01:16,225 | INFO     | sum of deviations: 5767937905.442126
[2025-12-02 22:02:25] 2025-12-03 03:01:16,225 | INFO     | mean x: 1764720242.0593472
[2025-12-02 22:02:25] 2025-12-03 03:01:16,225 | INFO     | mean y: 2625013.827893175
[2025-12-02 22:02:25] 2025-12-03 03:01:16,226 | INFO     | intersect: -855055955.6313359
[2025-12-02 22:02:25] 2025-12-03 03:01:16,226 | INFO     | chi2: 1.3664936063579396
[2025-12-02 22:02:25] 2025-12-03 03:01:16,226 | INFO     | current chi2=1.3664936063579396 (change=33.29835744918062 %)
[2025-12-02 22:02:25] 2025-12-03 03:01:16,226 | INFO     | sum of square deviations: 11347380755.795238
[2025-12-02 22:02:25] 2025-12-03 03:01:16,233 | INFO     | sum of deviations: 5212468542.4758835
[2025-12-02 22:02:25] 2025-12-03 03:01:16,233 | INFO     | mean x: 1764720089.560241
[2025-12-02 22:02:25] 2025-12-03 03:01:16,233 | INFO     | mean y: 2624851.051204819
[2025-12-02 22:02:25] 2025-12-03 03:01:16,233 | INFO     | intersect: -808006972.3685015
[2025-12-02 22:02:25] 2025-12-03 03:01:16,234 | INFO     | chi2: 1.3662858253308456
[2025-12-02 22:02:25] 2025-12-03 03:01:16,234 | INFO     | current chi2=1.3662858253308456 (change=0.015205415241403624 %)
[2025-12-02 22:02:25] 2025-12-03 03:01:16,234 | INFO     | right removable region: 331
[2025-12-02 22:02:25] 2025-12-03 03:01:16,234 | INFO     | sum of square deviations: 11867800120.813044
[2025-12-02 22:02:25] 2025-12-03 03:01:16,241 | INFO     | sum of deviations: -67357021732.59936
[2025-12-02 22:02:25] 2025-12-03 03:01:16,241 | INFO     | mean x: 1764720547.0593472
[2025-12-02 22:02:25] 2025-12-03 03:01:16,241 | INFO     | mean y: 2633157.729970326
[2025-12-02 22:02:25] 2025-12-03 03:01:16,241 | INFO     | intersect: 10018501223.436636
[2025-12-02 22:02:25] 2025-12-03 03:01:16,242 | INFO     | chi2: 0.7705504035072195
[2025-12-02 22:02:25] 2025-12-03 03:01:16,242 | INFO     | current chi2=0.7705504035072195 (change=62.387692600249714 %)
[2025-12-02 22:02:25] 2025-12-03 03:01:16,242 | INFO     | sum of square deviations: 11347356355.795238
[2025-12-02 22:02:25] 2025-12-03 03:01:16,249 | INFO     | sum of deviations: -66846785891.337326
[2025-12-02 22:02:25] 2025-12-03 03:01:16,249 | INFO     | mean x: 1764720699.560241
[2025-12-02 22:02:25] 2025-12-03 03:01:16,249 | INFO     | mean y: 2633002.2168674697
[2025-12-02 22:02:25] 2025-12-03 03:01:16,249 | INFO     | intersect: 10398526377.08808
[2025-12-02 22:02:25] 2025-12-03 03:01:16,250 | INFO     | chi2: 0.767476926168264
[2025-12-02 22:02:25] 2025-12-03 03:01:16,250 | INFO     | current chi2=0.767476926168264 (change=0.39886778658038424 %)
[2025-12-02 22:02:25] 2025-12-03 03:01:16,250 | INFO     | left removable region: 20
[2025-12-02 22:02:25] 2025-12-03 03:01:16,250 | INFO     | sum of square deviations: 9327438772.713734
[2025-12-02 22:02:25] 2025-12-03 03:01:16,257 | INFO     | sum of deviations: -37223936090.99677
[2025-12-02 22:02:25] 2025-12-03 03:01:16,257 | INFO     | mean x: 1764720669.0643086
[2025-12-02 22:02:25] 2025-12-03 03:01:16,257 | INFO     | mean y: 2637389.5498392284
[2025-12-02 22:02:25] 2025-12-03 03:01:16,257 | INFO     | intersect: 7045283393.925488
[2025-12-02 22:02:25] 2025-12-03 03:01:16,257 | INFO     | chi2: 0.07198760923221482
[2025-12-02 22:02:25] 2025-12-03 03:01:16,258 | INFO     | current memory leak: -3.99 B/s (using 311 data points, chi2=0.07)
[2025-12-02 22:02:25] 2025-12-03 03:01:16,258 | INFO     | could have reported an average CPU frequency of 3034 MHz (15 samples)
[2025-12-02 22:02:25] 2025-12-03 03:01:16,262 | INFO     | ..............................
[2025-12-02 22:02:25] 2025-12-03 03:01:16,262 | INFO     | . Timing measurements:
[2025-12-02 22:02:25] 2025-12-03 03:01:16,262 | INFO     | . get job = 0 s
[2025-12-02 22:02:25] 2025-12-03 03:01:16,262 | INFO     | . initial setup = 2 s
[2025-12-02 22:02:25] 2025-12-03 03:01:16,263 | INFO     | . payload setup = 7 s
[2025-12-02 22:02:25] 2025-12-03 03:01:16,263 | INFO     | . stage-in = 0 s
[2025-12-02 22:02:25] 2025-12-03 03:01:16,263 | INFO     | . payload execution = 20863 s
[2025-12-02 22:02:25] 2025-12-03 03:01:16,263 | INFO     | . stage-out = 3 s
[2025-12-02 22:02:25] 2025-12-03 03:01:16,263 | INFO     | . log creation = 0 s
[2025-12-02 22:02:25] 2025-12-03 03:01:16,263 | INFO     | ..............................
[2025-12-02 22:02:25] 2025-12-03 03:01:16,470 | INFO     | time since job start (20913s) is within the limit (172800.0s)
[2025-12-02 22:02:25] 2025-12-03 03:01:16,612 | INFO     | 
[2025-12-02 22:02:25] 2025-12-03 03:01:16,614 | INFO     | job summary report
[2025-12-02 22:02:25] 2025-12-03 03:01:16,614 | INFO     | --------------------------------------------------
[2025-12-02 22:02:25] 2025-12-03 03:01:16,614 | INFO     | PanDA job id: 6904565541
[2025-12-02 22:02:25] 2025-12-03 03:01:16,618 | INFO     | task id: 47523908
[2025-12-02 22:02:25] 2025-12-03 03:01:16,618 | INFO     | errors: (none)
[2025-12-02 22:02:25] 2025-12-03 03:01:16,618 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 22:02:25] 2025-12-03 03:01:16,618 | INFO     | pilot state: finished 
[2025-12-02 22:02:25] 2025-12-03 03:01:16,618 | INFO     | transexitcode: 0
[2025-12-02 22:02:25] 2025-12-03 03:01:16,618 | INFO     | exeerrorcode: 0
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | exeerrordiag: 
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | exitcode: 0
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | exitmsg: OK
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | cpuconsumptiontime: 88783 s
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | nevents: 400
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | neventsw: 0
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | pid: 968124
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | pgrp: 968124
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | corecount: 8
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | event service: False
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | sizes: {0: 2283735, 1: 2283934, 6: 2284196, 11: 2284224, 20875: 2317987, 20878: 2326985, 20881: 2327169, 20897: 2327363}
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | --------------------------------------------------
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | 
[2025-12-02 22:02:25] 2025-12-03 03:01:16,619 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-02 22:02:25] 2025-12-03 03:01:16,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,675 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,675 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,675 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 22:02:25] 2025-12-03 03:01:16,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 22:02:25] 2025-12-03 03:01:16,676 | INFO     | job 6904565541 has completed (purged errors)
[2025-12-02 22:02:25] 2025-12-03 03:01:16,677 | INFO     | overall cleanup function is called
[2025-12-02 22:02:25] 2025-12-03 03:01:17,686 | INFO     | --- collectZombieJob: --- 10, [968124]
[2025-12-02 22:02:25] 2025-12-03 03:01:17,686 | INFO     | zombie collector waiting for pid 968124
[2025-12-02 22:02:25] 2025-12-03 03:01:17,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 22:02:25] 2025-12-03 03:01:17,687 | INFO     | collected zombie processes
[2025-12-02 22:02:25] 2025-12-03 03:01:17,687 | INFO     | will attempt to kill all subprocesses of pid=968124
[2025-12-02 22:02:25] 2025-12-03 03:01:18,979 | INFO     | process IDs to be killed: [968124] (in reverse order)
[2025-12-02 22:02:25] 2025-12-03 03:01:19,250 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 22:02:25] 2025-12-03 03:01:19,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 22:02:25] 2025-12-03 03:01:19,272 | INFO     | did not find any defunct processes belonging to 968124
[2025-12-02 22:02:25] 2025-12-03 03:01:19,314 | INFO     | did not find any defunct processes belonging to 968124
[2025-12-02 22:02:25] 2025-12-03 03:01:19,319 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 22:02:25] 2025-12-03 03:01:19,319 | INFO     | ready for new job
[2025-12-02 22:02:25] 2025-12-03 03:01:19,319 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 22:02:25] 2025-12-03 03:01:19,321 | INFO     | ***************************************
[2025-12-02 22:02:25] 2025-12-03 03:01:19,322 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 22:02:25] 2025-12-03 03:01:19,322 | INFO     | ***************************************
[2025-12-02 22:02:25] 2025-12-03 03:01:19,322 | INFO     | 
[2025-12-02 22:02:25] 2025-12-03 03:01:19,368 | INFO     | architecture information:
[2025-12-02 22:02:25] 2025-12-03 03:01:19,376 | INFO     | executing command: cat /etc/os-release
[2025-12-02 22:02:25] 2025-12-03 03:01:19,449 | INFO     | cat /etc/os-release:
[2025-12-02 22:02:25] NAME="CentOS Linux"
[2025-12-02 22:02:25] VERSION="7 (Core)"
[2025-12-02 22:02:25] ID="centos"
[2025-12-02 22:02:25] ID_LIKE="rhel fedora"
[2025-12-02 22:02:25] VERSION_ID="7"
[2025-12-02 22:02:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 22:02:25] ANSI_COLOR="0;31"
[2025-12-02 22:02:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 22:02:25] HOME_URL="https://www.centos.org/"
[2025-12-02 22:02:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 22:02:25] 
[2025-12-02 22:02:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 22:02:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 22:02:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 22:02:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 22:02:25] 
[2025-12-02 22:02:25] 2025-12-03 03:01:19,450 | INFO     | ***************************************
[2025-12-02 22:02:25] 2025-12-03 03:01:19,955 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-02 22:02:25] 2025-12-03 03:01:19,985 | INFO     | sufficient remaining disk space (121347506176 B)
[2025-12-02 22:02:25] 2025-12-03 03:01:19,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 22:02:25] 2025-12-03 03:01:19,986 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 22:02:25] 2025-12-03 03:01:19,986 | INFO     | update_server=False
[2025-12-02 22:02:25] 2025-12-03 03:01:19,988 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 22:02:25] 2025-12-03 03:01:20,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 22:02:25] 2025-12-03 03:01:20,674 | INFO     | all data control threads have been joined
[2025-12-02 22:02:25] 2025-12-03 03:01:20,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 22:02:25] 2025-12-03 03:01:20,744 | INFO     | aborting loop
[2025-12-02 22:02:25] 2025-12-03 03:01:20,930 | INFO     | all payload control threads have been joined
[2025-12-02 22:02:25] 2025-12-03 03:01:20,994 | INFO     | [job] retrieve thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:21,277 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 22:02:25] 2025-12-03 03:01:21,292 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:21,627 | INFO     | [payload] validate_post thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:21,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 22:02:25] 2025-12-03 03:01:21,648 | INFO     | all job control threads have been joined
[2025-12-02 22:02:25] 2025-12-03 03:01:21,679 | INFO     | [data] control thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:21,750 | INFO     | [job] job monitor thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:21,936 | INFO     | [payload] control thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:22,140 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:22,144 | INFO     | [data] copytool_in thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:22,145 | INFO     | [job] validate thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:22,192 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:22,193 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:22,321 | INFO     | [payload] failed_post thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:22,637 | INFO     | [job] queue monitor thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:22,653 | INFO     | [job] control thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:23,284 | INFO     | [data] copytool_out thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:24,609 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 22:02:25] 2025-12-03 03:01:50,310 | INFO     | PID=961677 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-02 22:02:25] 2025-12-03 03:01:50,311 | INFO     | .. there are 19 such processes running
[2025-12-02 22:02:25] 2025-12-03 03:01:50,311 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 22:02:25] 2025-12-03 03:01:50,311 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 22:02:25] 2025-12-03 03:01:50,311 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 22:02:25] 2025-12-03 03:02:18,542 | INFO     | [monitor] cgroup control has ended
[2025-12-02 22:02:25] 2025-12-03 03:02:19,271 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140499055703872)>', '<ExcThread(monitor, started 140498555619072)>']
[2025-12-02 22:02:25] 2025-12-03 03:02:19,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 22:02:25] 2025-12-03 03:02:19,532 | INFO     | [monitor] control thread has ended
[2025-12-02 22:02:25] 2025-12-03 03:02:24,297 | INFO     | all workflow threads have been joined
[2025-12-02 22:02:25] 2025-12-03 03:02:24,299 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 22:02:25] 2025-12-03 03:02:24,299 | INFO     | traces error code: 0
[2025-12-02 22:02:25] 2025-12-03 03:02:24,299 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 22:02:25] 2025-12-03 03:02:24,653 [wrapper] ==== pilot stdout END ====
[2025-12-02 22:02:25] 2025-12-03 03:02:24,683 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 22:02:25] 2025-12-03 03:02:24,707 [wrapper] pilotpid: 961677
[2025-12-02 22:02:25] 2025-12-03 03:02:24,709 [wrapper] Pilot exit status: 0
[2025-12-02 22:02:25] 2025-12-03 03:02:24,787 [wrapper] pandaids: 6904565541
[2025-12-02 22:02:25] 2025-12-03 03:02:24,872 [wrapper] cleanup supervisor_pilot 1733821 961678
[2025-12-02 22:02:25] 2025-12-03 03:02:24,875 [wrapper] Test setup, not cleaning
[2025-12-02 22:02:25] 2025-12-03 03:02:24,881 [wrapper] apfmon messages muted
[2025-12-02 22:02:25] 2025-12-03 03:02:24,884 [wrapper] ==== wrapper stdout END ====
[2025-12-02 22:02:25] 2025-12-03 03:02:24,886 [wrapper] ==== wrapper stderr END ====
[2025-12-02 22:02:25]  *** Error codes and diagnostics ***
[2025-12-02 22:02:25]     "exeErrorCode": 0,
[2025-12-02 22:02:25]     "exeErrorDiag": "",
[2025-12-02 22:02:25]     "pilotErrorCode": 0,
[2025-12-02 22:02:25]     "pilotErrorDiag": "",
[2025-12-02 22:02:25]  *** Listing of results directory ***
[2025-12-02 22:02:25] total 627352
[2025-12-02 22:02:25] -rw-r--r--. 1 boincer umatlas    576529 Nov 29 19:16 pilot3.tar.gz
[2025-12-02 22:02:25] -rwx------. 1 boincer umatlas     36292 Nov 29 19:19 runpilot2-wrapper.sh
[2025-12-02 22:02:25] -rw-r--r--. 1 boincer umatlas      5112 Nov 29 19:24 queuedata.json
[2025-12-02 22:02:25] -rw-r--r--. 1 boincer umatlas       100 Dec  2 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 22:02:25] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 16:12 run_atlas
[2025-12-02 22:02:25] -rw-r--r--. 1 boincer umatlas       105 Dec  2 16:12 job.xml
[2025-12-02 22:02:25] -rw-r--r--. 2 boincer umatlas 297282870 Dec  2 16:12 EVNT.47523904._000003.pool.root.1
[2025-12-02 22:02:25] -rw-r--r--. 2 boincer umatlas    589967 Dec  2 16:12 input.tar.gz
[2025-12-02 22:02:25] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 16:12 start_atlas.sh
[2025-12-02 22:02:25] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 16:12 shared
[2025-12-02 22:02:25] -rw-r--r--. 1 boincer umatlas         0 Dec  2 16:12 boinc_lockfile
[2025-12-02 22:02:25] -rw-r--r--. 1 boincer umatlas      2619 Dec  2 16:12 pandaJob.out
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas        57 Dec  2 16:12 setup.sh.local
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas    989224 Dec  2 16:12 agis_schedconf.cvmfs.json
[2025-12-02 22:02:25] drwx------. 5 boincer umatlas      4096 Dec  2 16:12 pilot3
[2025-12-02 22:02:25] -rw-r--r--. 1 boincer umatlas      6947 Dec  2 21:58 init_data.xml
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas 334545430 Dec  2 21:59 HITS.47523908._000179.pool.root.1
[2025-12-02 22:02:25] -rw-r--r--. 1 boincer umatlas       531 Dec  2 21:59 boinc_task_state.xml
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas      1037 Dec  2 22:00 memory_monitor_summary.json
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas   1516240 Dec  2 22:00 agis_ddmendpoints.agis.ALL.json
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas    543091 Dec  2 22:00 log.47523908._000179.job.log.tgz.1
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas        95 Dec  2 22:01 pilot_heartbeat.json
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas      7764 Dec  2 22:01 heartbeat.json
[2025-12-02 22:02:25] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 22:02 boinc_mmap_file
[2025-12-02 22:02:25] -rw-r--r--. 1 boincer umatlas        28 Dec  2 22:02 wrapper_checkpoint.txt
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas      4824 Dec  2 22:02 pilotlog.txt
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas   2789412 Dec  2 22:02 log.47523908._000179.job.log.1
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas       357 Dec  2 22:02 output.list
[2025-12-02 22:02:25] -rw-r--r--. 1 boincer umatlas       620 Dec  2 22:02 runtime_log
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas   3348480 Dec  2 22:02 result.tar.gz
[2025-12-02 22:02:25] -rw-r--r--. 1 boincer umatlas      9343 Dec  2 22:02 runtime_log.err
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas       658 Dec  2 22:02 pu2LDmbLkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm39LKDmRHgiUn.diag
[2025-12-02 22:02:25] -rw-r--r--. 1 boincer umatlas     21275 Dec  2 22:02 stderr.txt
[2025-12-02 22:02:25] HITS file was successfully produced:
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas 334545430 Dec  2 21:59 shared/HITS.pool.root.1
[2025-12-02 22:02:25]  *** Contents of shared directory: ***
[2025-12-02 22:02:25] total 620900
[2025-12-02 22:02:25] -rw-r--r--. 2 boincer umatlas 297282870 Dec  2 16:12 ATLAS.root_0
[2025-12-02 22:02:25] -rw-r--r--. 2 boincer umatlas    589967 Dec  2 16:12 input.tar.gz
[2025-12-02 22:02:25] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 16:12 start_atlas.sh
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas 334545430 Dec  2 21:59 HITS.pool.root.1
[2025-12-02 22:02:25] -rw-------. 1 boincer umatlas   3348480 Dec  2 22:02 result.tar.gz
22:02:26 (958008): run_atlas exited; CPU time 89405.879683
22:02:26 (958008): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN