Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:51:24 (3465408): wrapper (7.7.26015): starting
12:51:24 (3465408): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 12:51:24] Arguments: --nthreads 8
[2025-12-02 12:51:24] Threads: 8
[2025-12-02 12:51:24] Checking for CVMFS
[2025-12-02 12:51:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 12:51:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 12:51:25] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 12:51:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 12:51:45] 2.13.3.0 12357 38966 302280 153564 3 473 25952796 32503808 54146 16776704 0 623128902 99.633 549582247 45417 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 12:51:45] CVMFS is ok
[2025-12-02 12:51:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 12:51:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 12:51:45] Further information can be found at the LHC@home message board.
[2025-12-02 12:51:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 12:51:45] Checking for apptainer binary...
[2025-12-02 12:51:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 12:51:45] Running /usr/bin/apptainer --version
[2025-12-02 12:51:45] apptainer version 1.4.4-1.el9
[2025-12-02 12:51:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 12:51:46] c8-7-2.aglt2.org
[2025-12-02 12:51:46] apptainer works
[2025-12-02 12:51:46] Set ATHENA_PROC_NUMBER=8
[2025-12-02 12:51:46] Set ATHENA_CORE_NUMBER=8
[2025-12-02 12:51:46] Starting ATLAS job with PandaID=6895375032
[2025-12-02 12:51:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 23:21:49]  *** The last 200 lines of the pilot log: ***
[2025-12-02 23:21:49] 2025-12-03 04:20:53,616 | INFO     | time since job start (37637s) is within the limit (172800.0s)
[2025-12-02 23:21:49] 2025-12-03 04:20:53,781 | INFO     | monitor loop #1919: job 0:6895375032 is in state 'finished'
[2025-12-02 23:21:49] 2025-12-03 04:20:53,781 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 23:21:49] 2025-12-03 04:20:55,622 | INFO     | time since job start (37639s) is within the limit (172800.0s)
[2025-12-02 23:21:49] 2025-12-03 04:20:56,287 | INFO     | monitor loop #1920: job 0:6895375032 is in state 'finished'
[2025-12-02 23:21:49] 2025-12-03 04:20:56,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 23:21:49] 2025-12-03 04:20:57,629 | INFO     | time since job start (37641s) is within the limit (172800.0s)
[2025-12-02 23:21:49] 2025-12-03 04:20:58,791 | INFO     | monitor loop #1921: job 0:6895375032 is in state 'finished'
[2025-12-02 23:21:49] 2025-12-03 04:20:58,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 23:21:49] 2025-12-03 04:20:58,988 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-02 23:21:49] 2025-12-03 04:20:58,993 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3781.450171875
[2025-12-02 23:21:49] 2025-12-03 04:20:59,005 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895375032/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 23:21:49] 2025-12-03 04:20:59,006 | INFO     | extracted standard info from prmon json
[2025-12-02 23:21:49] 2025-12-03 04:20:59,006 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 23:21:49] 2025-12-03 04:20:59,006 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 23:21:49] 2025-12-03 04:20:59,011 | INFO     | fitting pss+swap vs Time
[2025-12-02 23:21:49] 2025-12-03 04:20:59,012 | INFO     | sum of square deviations: 71787688394.95903
[2025-12-02 23:21:49] 2025-12-03 04:20:59,016 | INFO     | sum of deviations: 1135763561952.0234
[2025-12-02 23:21:49] 2025-12-03 04:20:59,016 | INFO     | mean x: 1764716895.0081434
[2025-12-02 23:21:49] 2025-12-03 04:20:59,016 | INFO     | mean y: 2795951.9951140066
[2025-12-02 23:21:49] 2025-12-03 04:20:59,016 | INFO     | intersect: -27917049237.67263
[2025-12-02 23:21:49] 2025-12-03 04:20:59,017 | INFO     | chi2: 18.69528045646235
[2025-12-02 23:21:49] 2025-12-03 04:20:59,017 | INFO     | sum of square deviations: 70048784583.90529
[2025-12-02 23:21:49] 2025-12-03 04:20:59,021 | INFO     | sum of deviations: 1350229871393.287
[2025-12-02 23:21:49] 2025-12-03 04:20:59,021 | INFO     | mean x: 1764716742.5238094
[2025-12-02 23:21:49] 2025-12-03 04:20:59,022 | INFO     | mean y: 2814767.8078817734
[2025-12-02 23:21:49] 2025-12-03 04:20:59,022 | INFO     | intersect: -34013096778.086094
[2025-12-02 23:21:49] 2025-12-03 04:20:59,022 | INFO     | chi2: 15.202286478173052
[2025-12-02 23:21:49] 2025-12-03 04:20:59,022 | INFO     | current chi2=15.202286478173052 (change=18.68382764529153 %)
[2025-12-02 23:21:49] 2025-12-03 04:20:59,022 | INFO     | right removable region: 608
[2025-12-02 23:21:49] 2025-12-03 04:20:59,022 | INFO     | sum of square deviations: 70047958145.74715
[2025-12-02 23:21:49] 2025-12-03 04:20:59,027 | INFO     | sum of deviations: 888185895532.6664
[2025-12-02 23:21:49] 2025-12-03 04:20:59,027 | INFO     | mean x: 1764717047.5287356
[2025-12-02 23:21:49] 2025-12-03 04:20:59,027 | INFO     | mean y: 2817653.761904762
[2025-12-02 23:21:49] 2025-12-03 04:20:59,027 | INFO     | intersect: -22373234878.130993
[2025-12-02 23:21:49] 2025-12-03 04:20:59,027 | INFO     | chi2: 13.889557497414366
[2025-12-02 23:21:49] 2025-12-03 04:20:59,027 | INFO     | current chi2=13.889557497414366 (change=25.7055408729469 %)
[2025-12-02 23:21:49] 2025-12-03 04:20:59,028 | INFO     | sum of square deviations: 68336591283.60773
[2025-12-02 23:21:49] 2025-12-03 04:20:59,032 | INFO     | sum of deviations: 680021932070.9675
[2025-12-02 23:21:49] 2025-12-03 04:20:59,032 | INFO     | mean x: 1764717200.0480132
[2025-12-02 23:21:49] 2025-12-03 04:20:59,032 | INFO     | mean y: 2836200.1390728476
[2025-12-02 23:21:49] 2025-12-03 04:20:59,032 | INFO     | intersect: -17557981180.334805
[2025-12-02 23:21:49] 2025-12-03 04:20:59,033 | INFO     | chi2: 10.671792653168682
[2025-12-02 23:21:49] 2025-12-03 04:20:59,033 | INFO     | current chi2=10.671792653168682 (change=23.166791633532547 %)
[2025-12-02 23:21:49] 2025-12-03 04:20:59,033 | INFO     | left removable region: 20
[2025-12-02 23:21:49] 2025-12-03 04:20:59,033 | INFO     | sum of square deviations: 63048902641.46264
[2025-12-02 23:21:49] 2025-12-03 04:20:59,037 | INFO     | sum of deviations: 579686327584.4225
[2025-12-02 23:21:49] 2025-12-03 04:20:59,037 | INFO     | mean x: 1764717322.1054423
[2025-12-02 23:21:49] 2025-12-03 04:20:59,037 | INFO     | mean y: 2891927.993197279
[2025-12-02 23:21:49] 2025-12-03 04:20:59,037 | INFO     | intersect: -16222331046.834278
[2025-12-02 23:21:49] 2025-12-03 04:20:59,038 | INFO     | chi2: 1.350190346491321
[2025-12-02 23:21:49] 2025-12-03 04:20:59,038 | INFO     | current memory leak: 9.19 B/s (using 588 data points, chi2=1.35)
[2025-12-02 23:21:49] 2025-12-03 04:20:59,038 | INFO     | could have reported an average CPU frequency of 3797 MHz (24 samples)
[2025-12-02 23:21:49] 2025-12-03 04:20:59,038 | INFO     | ..............................
[2025-12-02 23:21:49] 2025-12-03 04:20:59,038 | INFO     | . Timing measurements:
[2025-12-02 23:21:49] 2025-12-03 04:20:59,038 | INFO     | . get job = 0 s
[2025-12-02 23:21:49] 2025-12-03 04:20:59,038 | INFO     | . initial setup = 6 s
[2025-12-02 23:21:49] 2025-12-03 04:20:59,038 | INFO     | . payload setup = 62 s
[2025-12-02 23:21:49] 2025-12-03 04:20:59,039 | INFO     | . stage-in = 0 s
[2025-12-02 23:21:49] 2025-12-03 04:20:59,039 | INFO     | . payload execution = 37466 s
[2025-12-02 23:21:49] 2025-12-03 04:20:59,039 | INFO     | . stage-out = 3 s
[2025-12-02 23:21:49] 2025-12-03 04:20:59,039 | INFO     | . log creation = 0 s
[2025-12-02 23:21:49] 2025-12-03 04:20:59,039 | INFO     | ..............................
[2025-12-02 23:21:49] 2025-12-03 04:20:59,091 | INFO     | 
[2025-12-02 23:21:49] 2025-12-03 04:20:59,091 | INFO     | job summary report
[2025-12-02 23:21:49] 2025-12-03 04:20:59,091 | INFO     | --------------------------------------------------
[2025-12-02 23:21:49] 2025-12-03 04:20:59,091 | INFO     | PanDA job id: 6895375032
[2025-12-02 23:21:49] 2025-12-03 04:20:59,091 | INFO     | task id: 47556137
[2025-12-02 23:21:49] 2025-12-03 04:20:59,091 | INFO     | errors: (none)
[2025-12-02 23:21:49] 2025-12-03 04:20:59,091 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 23:21:49] 2025-12-03 04:20:59,091 | INFO     | pilot state: finished 
[2025-12-02 23:21:49] 2025-12-03 04:20:59,091 | INFO     | transexitcode: 0
[2025-12-02 23:21:49] 2025-12-03 04:20:59,091 | INFO     | exeerrorcode: 0
[2025-12-02 23:21:49] 2025-12-03 04:20:59,091 | INFO     | exeerrordiag: 
[2025-12-02 23:21:49] 2025-12-03 04:20:59,091 | INFO     | exitcode: 0
[2025-12-02 23:21:49] 2025-12-03 04:20:59,091 | INFO     | exitmsg: OK
[2025-12-02 23:21:49] 2025-12-03 04:20:59,092 | INFO     | cpuconsumptiontime: 133206 s
[2025-12-02 23:21:49] 2025-12-03 04:20:59,092 | INFO     | nevents: 1000
[2025-12-02 23:21:49] 2025-12-03 04:20:59,092 | INFO     | neventsw: 0
[2025-12-02 23:21:49] 2025-12-03 04:20:59,092 | INFO     | pid: 3523714
[2025-12-02 23:21:49] 2025-12-03 04:20:59,092 | INFO     | pgrp: 3523714
[2025-12-02 23:21:49] 2025-12-03 04:20:59,092 | INFO     | corecount: 8
[2025-12-02 23:21:49] 2025-12-03 04:20:59,092 | INFO     | event service: False
[2025-12-02 23:21:49] 2025-12-03 04:20:59,092 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 22: 2284371, 33: 2284399, 36: 2284717, 44: 2284873, 37533: 2326474, 37537: 2335468, 37540: 2335524, 37563: 2335770}
[2025-12-02 23:21:49] 2025-12-03 04:20:59,092 | INFO     | --------------------------------------------------
[2025-12-02 23:21:49] 2025-12-03 04:20:59,092 | INFO     | 
[2025-12-02 23:21:49] 2025-12-03 04:20:59,092 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-12-02 23:21:49] 2025-12-03 04:20:59,136 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,136 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 23:21:49] 2025-12-03 04:20:59,137 | INFO     | job 6895375032 has completed (purged errors)
[2025-12-02 23:21:49] 2025-12-03 04:20:59,138 | INFO     | overall cleanup function is called
[2025-12-02 23:21:49] 2025-12-03 04:21:00,161 | INFO     | --- collectZombieJob: --- 10, [3523714]
[2025-12-02 23:21:49] 2025-12-03 04:21:00,161 | INFO     | zombie collector waiting for pid 3523714
[2025-12-02 23:21:49] 2025-12-03 04:21:00,161 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 23:21:49] 2025-12-03 04:21:00,161 | INFO     | collected zombie processes
[2025-12-02 23:21:49] 2025-12-03 04:21:00,161 | INFO     | will attempt to kill all subprocesses of pid=3523714
[2025-12-02 23:21:49] 2025-12-03 04:21:00,853 | INFO     | process IDs to be killed: [3523714] (in reverse order)
[2025-12-02 23:21:49] 2025-12-03 04:21:01,089 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 23:21:49] 2025-12-03 04:21:01,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 23:21:49] 2025-12-03 04:21:01,128 | INFO     | did not find any defunct processes belonging to 3523714
[2025-12-02 23:21:49] 2025-12-03 04:21:01,162 | INFO     | did not find any defunct processes belonging to 3523714
[2025-12-02 23:21:49] 2025-12-03 04:21:01,166 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 23:21:49] 2025-12-03 04:21:01,166 | INFO     | ready for new job
[2025-12-02 23:21:49] 2025-12-03 04:21:01,166 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 23:21:49] 2025-12-03 04:21:01,169 | INFO     | ***************************************
[2025-12-02 23:21:49] 2025-12-03 04:21:01,169 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 23:21:49] 2025-12-03 04:21:01,169 | INFO     | ***************************************
[2025-12-02 23:21:49] 2025-12-03 04:21:01,169 | INFO     | 
[2025-12-02 23:21:49] 2025-12-03 04:21:01,178 | INFO     | architecture information:
[2025-12-02 23:21:49] 2025-12-03 04:21:01,187 | INFO     | executing command: cat /etc/os-release
[2025-12-02 23:21:49] 2025-12-03 04:21:01,240 | INFO     | cat /etc/os-release:
[2025-12-02 23:21:49] NAME="CentOS Linux"
[2025-12-02 23:21:49] VERSION="7 (Core)"
[2025-12-02 23:21:49] ID="centos"
[2025-12-02 23:21:49] ID_LIKE="rhel fedora"
[2025-12-02 23:21:49] VERSION_ID="7"
[2025-12-02 23:21:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 23:21:49] ANSI_COLOR="0;31"
[2025-12-02 23:21:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 23:21:49] HOME_URL="https://www.centos.org/"
[2025-12-02 23:21:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 23:21:49] 
[2025-12-02 23:21:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 23:21:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 23:21:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 23:21:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 23:21:49] 
[2025-12-02 23:21:49] 2025-12-03 04:21:01,241 | INFO     | ***************************************
[2025-12-02 23:21:49] 2025-12-03 04:21:01,747 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-12-02 23:21:49] 2025-12-03 04:21:01,792 | INFO     | sufficient remaining disk space (83098599424 B)
[2025-12-02 23:21:49] 2025-12-03 04:21:01,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 23:21:49] 2025-12-03 04:21:01,793 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 23:21:49] 2025-12-03 04:21:01,793 | INFO     | update_server=False
[2025-12-02 23:21:49] 2025-12-03 04:21:01,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 23:21:49] 2025-12-03 04:21:01,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 23:21:49] 2025-12-03 04:21:02,228 | INFO     | all data control threads have been joined
[2025-12-02 23:21:49] 2025-12-03 04:21:02,300 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 23:21:49] 2025-12-03 04:21:02,301 | INFO     | aborting loop
[2025-12-02 23:21:49] 2025-12-03 04:21:02,800 | INFO     | [job] retrieve thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:02,922 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:02,934 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:03,004 | INFO     | [payload] failed_post thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:03,022 | INFO     | all payload control threads have been joined
[2025-12-02 23:21:49] 2025-12-03 04:21:03,233 | INFO     | all job control threads have been joined
[2025-12-02 23:21:49] 2025-12-03 04:21:03,248 | INFO     | [data] control thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:03,311 | INFO     | [job] job monitor thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:03,801 | INFO     | [data] copytool_out thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:04,028 | INFO     | [payload] control thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:04,106 | INFO     | [data] copytool_in thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:04,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 23:21:49] 2025-12-03 04:21:04,133 | INFO     | [payload] validate_post thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:04,178 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:04,239 | INFO     | [job] control thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:04,295 | INFO     | [job] validate thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:04,727 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 23:21:49] 2025-12-03 04:21:05,116 | INFO     | [job] queue monitor thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:08,737 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:12,318 | INFO     | job.realtimelogging is not enabled
[2025-12-02 23:21:49] 2025-12-03 04:21:13,325 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 23:21:49] 2025-12-03 04:21:31,493 | INFO     | PID=3496910 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 23:21:49] 2025-12-03 04:21:31,496 | INFO     | .. there are 66 such processes running
[2025-12-02 23:21:49] 2025-12-03 04:21:31,497 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 23:21:49] 2025-12-03 04:21:31,497 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 23:21:49] 2025-12-03 04:21:31,497 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 23:21:49] 2025-12-03 04:21:43,113 | INFO     | [monitor] cgroup control has ended
[2025-12-02 23:21:49] 2025-12-03 04:21:43,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140370673780544)>', '<ExcThread(monitor, started 140370025359104)>']
[2025-12-02 23:21:49] 2025-12-03 04:21:44,575 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 23:21:49] 2025-12-03 04:21:44,575 | INFO     | [monitor] control thread has ended
[2025-12-02 23:21:49] 2025-12-03 04:21:48,974 | INFO     | all workflow threads have been joined
[2025-12-02 23:21:49] 2025-12-03 04:21:48,974 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 23:21:49] 2025-12-03 04:21:48,974 | INFO     | traces error code: 0
[2025-12-02 23:21:49] 2025-12-03 04:21:48,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 23:21:49] 2025-12-03 04:21:49,256 [wrapper] ==== pilot stdout END ====
[2025-12-02 23:21:49] 2025-12-03 04:21:49,298 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 23:21:49] 2025-12-03 04:21:49,307 [wrapper] pilotpid: 3496910
[2025-12-02 23:21:49] 2025-12-03 04:21:49,328 [wrapper] Pilot exit status: 0
[2025-12-02 23:21:49] 2025-12-03 04:21:49,410 [wrapper] pandaids: 6895375032
[2025-12-02 23:21:49] 2025-12-03 04:21:49,605 [wrapper] cleanup supervisor_pilot 3597193 3496911
[2025-12-02 23:21:49] 2025-12-03 04:21:49,610 [wrapper] Test setup, not cleaning
[2025-12-02 23:21:49] 2025-12-03 04:21:49,640 [wrapper] apfmon messages muted
[2025-12-02 23:21:49] 2025-12-03 04:21:49,673 [wrapper] ==== wrapper stdout END ====
[2025-12-02 23:21:49] 2025-12-03 04:21:49,675 [wrapper] ==== wrapper stderr END ====
[2025-12-02 23:21:49]  *** Error codes and diagnostics ***
[2025-12-02 23:21:49]     "exeErrorCode": 0,
[2025-12-02 23:21:49]     "exeErrorDiag": "",
[2025-12-02 23:21:49]     "pilotErrorCode": 0,
[2025-12-02 23:21:49]     "pilotErrorDiag": "",
[2025-12-02 23:21:49]  *** Listing of results directory ***
[2025-12-02 23:21:49] total 1298532
[2025-12-02 23:21:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 18:11 pilot3.tar.gz
[2025-12-02 23:21:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 18:43 queuedata.json
[2025-12-02 23:21:49] -rwx------. 1 boincer umatlas     36292 Nov 23 18:44 runpilot2-wrapper.sh
[2025-12-02 23:21:49] -rw-r--r--. 1 boincer umatlas       100 Dec  2 12:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 23:21:49] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 12:51 run_atlas
[2025-12-02 23:21:49] -rw-r--r--. 1 boincer umatlas       105 Dec  2 12:51 job.xml
[2025-12-02 23:21:49] -rw-r--r--. 2 boincer umatlas 407453356 Dec  2 12:51 EVNT.47483658._000950.pool.root.1
[2025-12-02 23:21:49] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 12:51 start_atlas.sh
[2025-12-02 23:21:49] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 12:51 shared
[2025-12-02 23:21:49] -rw-r--r--. 2 boincer umatlas    590103 Dec  2 12:51 input.tar.gz
[2025-12-02 23:21:49] -rw-r--r--. 1 boincer umatlas         0 Dec  2 12:51 boinc_lockfile
[2025-12-02 23:21:49] -rw-r--r--. 1 boincer umatlas      2786 Dec  2 12:51 pandaJob.out
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas        57 Dec  2 12:51 setup.sh.local
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas    988858 Dec  2 12:53 agis_schedconf.cvmfs.json
[2025-12-02 23:21:49] drwx------. 5 boincer umatlas      4096 Dec  2 12:53 pilot3
[2025-12-02 23:21:49] -rw-r--r--. 1 boincer umatlas       533 Dec  2 23:10 boinc_task_state.xml
[2025-12-02 23:21:49] -rw-r--r--. 1 boincer umatlas      7172 Dec  2 23:13 init_data.xml
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas 906011811 Dec  2 23:19 HITS.47556137._009365.pool.root.1
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas      1051 Dec  2 23:20 memory_monitor_summary.json
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas   1516240 Dec  2 23:20 agis_ddmendpoints.agis.ALL.json
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas   1813973 Dec  2 23:20 log.47556137._009365.job.log.tgz.1
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas      8577 Dec  2 23:20 heartbeat.json
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas        95 Dec  2 23:21 pilot_heartbeat.json
[2025-12-02 23:21:49] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 23:21 boinc_mmap_file
[2025-12-02 23:21:49] -rw-r--r--. 1 boincer umatlas        29 Dec  2 23:21 wrapper_checkpoint.txt
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas      4896 Dec  2 23:21 pilotlog.txt
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas   4345473 Dec  2 23:21 log.47556137._009365.job.log.1
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas       353 Dec  2 23:21 output.list
[2025-12-02 23:21:49] -rw-r--r--. 1 boincer umatlas       620 Dec  2 23:21 runtime_log
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas   6174720 Dec  2 23:21 result.tar.gz
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas       657 Dec  2 23:21 x2jLDmxvYh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAILKDm3fYafm.diag
[2025-12-02 23:21:49] -rw-r--r--. 1 boincer umatlas      9333 Dec  2 23:21 runtime_log.err
[2025-12-02 23:21:49] -rw-r--r--. 1 boincer umatlas     21567 Dec  2 23:21 stderr.txt
[2025-12-02 23:21:49] HITS file was successfully produced:
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas 906011811 Dec  2 23:19 shared/HITS.pool.root.1
[2025-12-02 23:21:49]  *** Contents of shared directory: ***
[2025-12-02 23:21:49] total 1289320
[2025-12-02 23:21:49] -rw-r--r--. 2 boincer umatlas 407453356 Dec  2 12:51 ATLAS.root_0
[2025-12-02 23:21:49] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 12:51 start_atlas.sh
[2025-12-02 23:21:49] -rw-r--r--. 2 boincer umatlas    590103 Dec  2 12:51 input.tar.gz
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas 906011811 Dec  2 23:19 HITS.pool.root.1
[2025-12-02 23:21:49] -rw-------. 1 boincer umatlas   6174720 Dec  2 23:21 result.tar.gz
23:21:51 (3465408): run_atlas exited; CPU time 134093.578623
23:21:51 (3465408): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN