Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:50:49 (2978): wrapper (7.7.26015): starting
11:50:49 (2978): wrapper: running run_atlas (--nthreads 12)
[2025-12-02 11:50:49] Arguments: --nthreads 12
[2025-12-02 11:50:49] Threads: 12
[2025-12-02 11:50:49] Checking for CVMFS
[2025-12-02 11:50:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 11:50:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 11:50:49] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 11:50:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 11:50:49] 2.11.2.0 10903 15049 91616 153562 3 68 15993503 20275201 1 130560 0 6715903 99.804 1685018 41439 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 11:50:49] CVMFS is ok
[2025-12-02 11:50:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 11:50:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 11:50:49] Further information can be found at the LHC@home message board.
[2025-12-02 11:50:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 11:50:49] Checking for apptainer binary...
[2025-12-02 11:50:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 11:50:49] Running /usr/bin/apptainer --version
[2025-12-02 11:50:49] apptainer version 1.3.2-1.el7
[2025-12-02 11:50:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 11:50:51] c-205-22.aglt2.org
[2025-12-02 11:50:51] apptainer works
[2025-12-02 11:50:51] Set ATHENA_PROC_NUMBER=12
[2025-12-02 11:50:51] Set ATHENA_CORE_NUMBER=12
[2025-12-02 11:50:51] Starting ATLAS job with PandaID=6895340556
[2025-12-02 11:50:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 18:56:54]  *** The last 200 lines of the pilot log: ***
[2025-12-02 18:56:54] 2025-12-02 23:56:12,108 | INFO     | monitor loop #1909: job 0:6895340556 is in state 'finished'
[2025-12-02 18:56:54] 2025-12-02 23:56:12,109 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 18:56:54] 2025-12-02 23:56:13,028 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-02 18:56:54] 2025-12-02 23:56:13,032 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-12-02 18:56:54] 2025-12-02 23:56:13,035 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895340556/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 18:56:54] 2025-12-02 23:56:13,035 | INFO     | extracted standard info from prmon json
[2025-12-02 18:56:54] 2025-12-02 23:56:13,036 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 18:56:54] 2025-12-02 23:56:13,036 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 18:56:54] 2025-12-02 23:56:13,043 | INFO     | fitting pss+swap vs Time
[2025-12-02 18:56:54] 2025-12-02 23:56:13,044 | INFO     | sum of square deviations: 22646756904.892414
[2025-12-02 18:56:54] 2025-12-02 23:56:13,048 | INFO     | sum of deviations: 349522613510.574
[2025-12-02 18:56:54] 2025-12-02 23:56:13,048 | INFO     | mean x: 1764707014.791866
[2025-12-02 18:56:54] 2025-12-02 23:56:13,048 | INFO     | mean y: 3411654.110047847
[2025-12-02 18:56:54] 2025-12-02 23:56:13,048 | INFO     | intersect: -27232497243.611496
[2025-12-02 18:56:54] 2025-12-02 23:56:13,049 | INFO     | chi2: 6.694286704336475
[2025-12-02 18:56:54] 2025-12-02 23:56:13,049 | INFO     | sum of square deviations: 21843793011.96131
[2025-12-02 18:56:54] 2025-12-02 23:56:13,053 | INFO     | sum of deviations: 525267550697.95575
[2025-12-02 18:56:54] 2025-12-02 23:56:13,053 | INFO     | mean x: 1764706862.2953994
[2025-12-02 18:56:54] 2025-12-02 23:56:13,053 | INFO     | mean y: 3445002.082324455
[2025-12-02 18:56:54] 2025-12-02 23:56:13,053 | INFO     | intersect: -42431641740.87481
[2025-12-02 18:56:54] 2025-12-02 23:56:13,054 | INFO     | chi2: 3.070540539975345
[2025-12-02 18:56:54] 2025-12-02 23:56:13,054 | INFO     | current chi2=3.070540539975345 (change=54.13192360007098 %)
[2025-12-02 18:56:54] 2025-12-02 23:56:13,054 | INFO     | sum of square deviations: 21060013832.115257
[2025-12-02 18:56:54] 2025-12-02 23:56:13,058 | INFO     | sum of deviations: 570645854046.9636
[2025-12-02 18:56:54] 2025-12-02 23:56:13,058 | INFO     | mean x: 1764706709.7965686
[2025-12-02 18:56:54] 2025-12-02 23:56:13,058 | INFO     | mean y: 3453779.830882353
[2025-12-02 18:56:54] 2025-12-02 23:56:13,058 | INFO     | intersect: -47813350880.50705
[2025-12-02 18:56:54] 2025-12-02 23:56:13,059 | INFO     | chi2: 2.5679024617093984
[2025-12-02 18:56:54] 2025-12-02 23:56:13,059 | INFO     | current chi2=2.5679024617093984 (change=16.369693600266963 %)
[2025-12-02 18:56:54] 2025-12-02 23:56:13,059 | INFO     | right removable region: 407
[2025-12-02 18:56:54] 2025-12-02 23:56:13,060 | INFO     | sum of square deviations: 21843718591.961304
[2025-12-02 18:56:54] 2025-12-02 23:56:13,063 | INFO     | sum of deviations: 207930448731.07278
[2025-12-02 18:56:54] 2025-12-02 23:56:13,063 | INFO     | mean x: 1764707167.2953994
[2025-12-02 18:56:54] 2025-12-02 23:56:13,064 | INFO     | mean y: 3438466.196125908
[2025-12-02 18:56:54] 2025-12-02 23:56:13,064 | INFO     | intersect: -16794816447.676865
[2025-12-02 18:56:54] 2025-12-02 23:56:13,064 | INFO     | chi2: 4.291519127612883
[2025-12-02 18:56:54] 2025-12-02 23:56:13,064 | INFO     | current chi2=4.291519127612883 (change=35.89280953812614 %)
[2025-12-02 18:56:54] 2025-12-02 23:56:13,065 | INFO     | sum of square deviations: 21059889941.519604
[2025-12-02 18:56:54] 2025-12-02 23:56:13,068 | INFO     | sum of deviations: 177409665760.46588
[2025-12-02 18:56:54] 2025-12-02 23:56:13,068 | INFO     | mean x: 1764707319.7990196
[2025-12-02 18:56:54] 2025-12-02 23:56:13,069 | INFO     | mean y: 3444396.6642156863
[2025-12-02 18:56:54] 2025-12-02 23:56:13,069 | INFO     | intersect: -14862546671.663336
[2025-12-02 18:56:54] 2025-12-02 23:56:13,069 | INFO     | chi2: 4.245228140110856
[2025-12-02 18:56:54] 2025-12-02 23:56:13,069 | INFO     | current chi2=4.245228140110856 (change=1.0786620337813964 %)
[2025-12-02 18:56:54] 2025-12-02 23:56:13,069 | INFO     | left removable region: 20
[2025-12-02 18:56:54] 2025-12-02 23:56:13,070 | INFO     | sum of square deviations: 17972518775.62797
[2025-12-02 18:56:54] 2025-12-02 23:56:13,073 | INFO     | sum of deviations: 359861511856.0927
[2025-12-02 18:56:54] 2025-12-02 23:56:13,073 | INFO     | mean x: 1764707289.3023255
[2025-12-02 18:56:54] 2025-12-02 23:56:13,074 | INFO     | mean y: 3495465.5633074935
[2025-12-02 18:56:54] 2025-12-02 23:56:13,074 | INFO     | intersect: -35331019470.26059
[2025-12-02 18:56:54] 2025-12-02 23:56:13,074 | INFO     | chi2: 0.05382412974205062
[2025-12-02 18:56:54] 2025-12-02 23:56:13,074 | INFO     | current memory leak: 20.02 B/s (using 387 data points, chi2=0.05)
[2025-12-02 18:56:54] 2025-12-02 23:56:13,075 | INFO     | could have reported an average CPU frequency of 2344 MHz (18 samples)
[2025-12-02 18:56:54] 2025-12-02 23:56:13,075 | INFO     | ..............................
[2025-12-02 18:56:54] 2025-12-02 23:56:13,075 | INFO     | . Timing measurements:
[2025-12-02 18:56:54] 2025-12-02 23:56:13,075 | INFO     | . get job = 0 s
[2025-12-02 18:56:54] 2025-12-02 23:56:13,075 | INFO     | . initial setup = 2 s
[2025-12-02 18:56:54] 2025-12-02 23:56:13,075 | INFO     | . payload setup = 7 s
[2025-12-02 18:56:54] 2025-12-02 23:56:13,075 | INFO     | . stage-in = 0 s
[2025-12-02 18:56:54] 2025-12-02 23:56:13,076 | INFO     | . payload execution = 25467 s
[2025-12-02 18:56:54] 2025-12-02 23:56:13,076 | INFO     | . stage-out = 3 s
[2025-12-02 18:56:54] 2025-12-02 23:56:13,076 | INFO     | . log creation = 0 s
[2025-12-02 18:56:54] 2025-12-02 23:56:13,076 | INFO     | ..............................
[2025-12-02 18:56:54] 2025-12-02 23:56:13,158 | INFO     | time since job start (25507s) is within the limit (172800.0s)
[2025-12-02 18:56:54] 2025-12-02 23:56:13,158 | INFO     | 
[2025-12-02 18:56:54] 2025-12-02 23:56:13,158 | INFO     | job summary report
[2025-12-02 18:56:54] 2025-12-02 23:56:13,159 | INFO     | --------------------------------------------------
[2025-12-02 18:56:54] 2025-12-02 23:56:13,159 | INFO     | PanDA job id: 6895340556
[2025-12-02 18:56:54] 2025-12-02 23:56:13,159 | INFO     | task id: 47556137
[2025-12-02 18:56:54] 2025-12-02 23:56:13,159 | INFO     | errors: (none)
[2025-12-02 18:56:54] 2025-12-02 23:56:13,159 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 18:56:54] 2025-12-02 23:56:13,159 | INFO     | pilot state: finished 
[2025-12-02 18:56:54] 2025-12-02 23:56:13,160 | INFO     | transexitcode: 0
[2025-12-02 18:56:54] 2025-12-02 23:56:13,160 | INFO     | exeerrorcode: 0
[2025-12-02 18:56:54] 2025-12-02 23:56:13,160 | INFO     | exeerrordiag: 
[2025-12-02 18:56:54] 2025-12-02 23:56:13,160 | INFO     | exitcode: 0
[2025-12-02 18:56:54] 2025-12-02 23:56:13,160 | INFO     | exitmsg: OK
[2025-12-02 18:56:54] 2025-12-02 23:56:13,161 | INFO     | cpuconsumptiontime: 292545 s
[2025-12-02 18:56:54] 2025-12-02 23:56:13,161 | INFO     | nevents: 1000
[2025-12-02 18:56:54] 2025-12-02 23:56:13,161 | INFO     | neventsw: 0
[2025-12-02 18:56:54] 2025-12-02 23:56:13,161 | INFO     | pid: 13168
[2025-12-02 18:56:54] 2025-12-02 23:56:13,161 | INFO     | pgrp: 13168
[2025-12-02 18:56:54] 2025-12-02 23:56:13,161 | INFO     | corecount: 12
[2025-12-02 18:56:54] 2025-12-02 23:56:13,161 | INFO     | event service: False
[2025-12-02 18:56:54] 2025-12-02 23:56:13,162 | INFO     | sizes: {0: 2284263, 5: 2284525, 11: 2284581, 25478: 2321706, 25482: 2330700, 25484: 2330756, 25490: 2331130}
[2025-12-02 18:56:54] 2025-12-02 23:56:13,162 | INFO     | --------------------------------------------------
[2025-12-02 18:56:54] 2025-12-02 23:56:13,162 | INFO     | 
[2025-12-02 18:56:54] 2025-12-02 23:56:13,162 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-02 18:56:54] 2025-12-02 23:56:13,186 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,187 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,187 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,187 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,187 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,189 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,189 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,189 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,189 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 18:56:54] 2025-12-02 23:56:13,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,190 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 18:56:54] 2025-12-02 23:56:13,190 | INFO     | job 6895340556 has completed (purged errors)
[2025-12-02 18:56:54] 2025-12-02 23:56:13,190 | INFO     | overall cleanup function is called
[2025-12-02 18:56:54] 2025-12-02 23:56:14,207 | INFO     | --- collectZombieJob: --- 10, [13168]
[2025-12-02 18:56:54] 2025-12-02 23:56:14,207 | INFO     | zombie collector waiting for pid 13168
[2025-12-02 18:56:54] 2025-12-02 23:56:14,208 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 18:56:54] 2025-12-02 23:56:14,208 | INFO     | collected zombie processes
[2025-12-02 18:56:54] 2025-12-02 23:56:14,208 | INFO     | will attempt to kill all subprocesses of pid=13168
[2025-12-02 18:56:54] 2025-12-02 23:56:14,301 | INFO     | process IDs to be killed: [13168] (in reverse order)
[2025-12-02 18:56:54] 2025-12-02 23:56:14,353 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 18:56:54] 2025-12-02 23:56:14,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 18:56:54] 2025-12-02 23:56:14,357 | INFO     | did not find any defunct processes belonging to 13168
[2025-12-02 18:56:54] 2025-12-02 23:56:14,359 | INFO     | did not find any defunct processes belonging to 13168
[2025-12-02 18:56:54] 2025-12-02 23:56:14,361 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 18:56:54] 2025-12-02 23:56:14,361 | INFO     | ready for new job
[2025-12-02 18:56:54] 2025-12-02 23:56:14,361 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 18:56:54] 2025-12-02 23:56:14,363 | INFO     | ***************************************
[2025-12-02 18:56:54] 2025-12-02 23:56:14,363 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 18:56:54] 2025-12-02 23:56:14,364 | INFO     | ***************************************
[2025-12-02 18:56:54] 2025-12-02 23:56:14,364 | INFO     | 
[2025-12-02 18:56:54] 2025-12-02 23:56:14,364 | INFO     | architecture information:
[2025-12-02 18:56:54] 2025-12-02 23:56:14,365 | INFO     | executing command: cat /etc/os-release
[2025-12-02 18:56:54] 2025-12-02 23:56:14,382 | INFO     | cat /etc/os-release:
[2025-12-02 18:56:54] NAME="CentOS Linux"
[2025-12-02 18:56:54] VERSION="7 (Core)"
[2025-12-02 18:56:54] ID="centos"
[2025-12-02 18:56:54] ID_LIKE="rhel fedora"
[2025-12-02 18:56:54] VERSION_ID="7"
[2025-12-02 18:56:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 18:56:54] ANSI_COLOR="0;31"
[2025-12-02 18:56:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 18:56:54] HOME_URL="https://www.centos.org/"
[2025-12-02 18:56:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 18:56:54] 
[2025-12-02 18:56:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 18:56:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 18:56:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 18:56:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 18:56:54] 
[2025-12-02 18:56:54] 2025-12-02 23:56:14,382 | INFO     | ***************************************
[2025-12-02 18:56:54] 2025-12-02 23:56:14,885 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-02 18:56:54] 2025-12-02 23:56:14,902 | INFO     | sufficient remaining disk space (28250734592 B)
[2025-12-02 18:56:54] 2025-12-02 23:56:14,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 18:56:54] 2025-12-02 23:56:14,903 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 18:56:54] 2025-12-02 23:56:14,903 | INFO     | update_server=False
[2025-12-02 18:56:54] 2025-12-02 23:56:14,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 18:56:54] 2025-12-02 23:56:14,903 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 18:56:54] 2025-12-02 23:56:14,904 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-02 18:56:54] 2025-12-02 23:56:14,904 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 18:56:54] 2025-12-02 23:56:14,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 18:56:54] 2025-12-02 23:56:14,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 18:56:54] 2025-12-02 23:56:15,020 | INFO     | all job control threads have been joined
[2025-12-02 18:56:54] 2025-12-02 23:56:15,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 18:56:54] 2025-12-02 23:56:15,169 | INFO     | all payload control threads have been joined
[2025-12-02 18:56:54] 2025-12-02 23:56:15,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 18:56:54] 2025-12-02 23:56:15,622 | INFO     | aborting loop
[2025-12-02 18:56:54] 2025-12-02 23:56:15,684 | INFO     | all data control threads have been joined
[2025-12-02 18:56:54] 2025-12-02 23:56:15,906 | INFO     | [job] retrieve thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:15,909 | INFO     | [job] queue monitor thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:15,924 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:15,926 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:15,982 | INFO     | [data] copytool_in thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:16,026 | INFO     | [job] control thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:16,155 | INFO     | [payload] validate_post thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:16,174 | INFO     | [payload] control thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:16,628 | INFO     | [job] job monitor thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:16,656 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:16,685 | INFO     | [data] control thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:16,839 | INFO     | [job] validate thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:17,100 | INFO     | [data] copytool_out thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:17,170 | INFO     | [payload] failed_post thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:17,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 18:56:54] 2025-12-02 23:56:21,579 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:25,742 | INFO     | job.realtimelogging is not enabled
[2025-12-02 18:56:54] 2025-12-02 23:56:26,748 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 18:56:54] 2025-12-02 23:56:48,016 | INFO     | [monitor] cgroup control has ended
[2025-12-02 18:56:54] 2025-12-02 23:56:49,047 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139868230190912)>', '<ExcThread(monitor, started 139867338036992)>']
[2025-12-02 18:56:54] 2025-12-02 23:56:50,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 18:56:54] 2025-12-02 23:56:50,051 | INFO     | [monitor] control thread has ended
[2025-12-02 18:56:54] 2025-12-02 23:56:54,068 | INFO     | all workflow threads have been joined
[2025-12-02 18:56:54] 2025-12-02 23:56:54,069 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 18:56:54] 2025-12-02 23:56:54,069 | INFO     | traces error code: 0
[2025-12-02 18:56:54] 2025-12-02 23:56:54,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 18:56:54] 2025-12-02 23:56:54,170 [wrapper] ==== pilot stdout END ====
[2025-12-02 18:56:54] 2025-12-02 23:56:54,174 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 18:56:54] 2025-12-02 23:56:54,177 [wrapper] pilotpid: 6707
[2025-12-02 18:56:54] 2025-12-02 23:56:54,180 [wrapper] Pilot exit status: 0
[2025-12-02 18:56:54] 2025-12-02 23:56:54,195 [wrapper] pandaids: 6895340556
[2025-12-02 18:56:54] 2025-12-02 23:56:54,240 [wrapper] cleanup supervisor_pilot 28212 6708
[2025-12-02 18:56:54] 2025-12-02 23:56:54,244 [wrapper] Test setup, not cleaning
[2025-12-02 18:56:54] 2025-12-02 23:56:54,248 [wrapper] apfmon messages muted
[2025-12-02 18:56:54] 2025-12-02 23:56:54,252 [wrapper] ==== wrapper stdout END ====
[2025-12-02 18:56:54] 2025-12-02 23:56:54,255 [wrapper] ==== wrapper stderr END ====
[2025-12-02 18:56:54]  *** Error codes and diagnostics ***
[2025-12-02 18:56:54]     "exeErrorCode": 0,
[2025-12-02 18:56:54]     "exeErrorDiag": "",
[2025-12-02 18:56:54]     "pilotErrorCode": 0,
[2025-12-02 18:56:54]     "pilotErrorDiag": "",
[2025-12-02 18:56:54]  *** Listing of results directory ***
[2025-12-02 18:56:54] total 1307620
[2025-12-02 18:56:54] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 08:39 pilot3.tar.gz
[2025-12-02 18:56:54] -rwx------ 1 boincer umatlas     36292 Nov 22 09:07 runpilot2-wrapper.sh
[2025-12-02 18:56:54] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 09:07 queuedata.json
[2025-12-02 18:56:54] -rw-r--r-- 1 boincer umatlas       100 Dec  2 11:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 18:56:54] -rwxr-xr-x 1 boincer umatlas      7986 Dec  2 11:50 run_atlas
[2025-12-02 18:56:54] -rw-r--r-- 1 boincer umatlas       105 Dec  2 11:50 job.xml
[2025-12-02 18:56:54] -rw-r--r-- 2 boincer umatlas 411059038 Dec  2 11:50 EVNT.47483658._000391.pool.root.1
[2025-12-02 18:56:54] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 11:50 start_atlas.sh
[2025-12-02 18:56:54] drwxrwx--x 2 boincer umatlas      4096 Dec  2 11:50 shared
[2025-12-02 18:56:54] -rw-r--r-- 2 boincer umatlas    590104 Dec  2 11:50 input.tar.gz
[2025-12-02 18:56:54] -rw-r--r-- 1 boincer umatlas         0 Dec  2 11:50 boinc_lockfile
[2025-12-02 18:56:54] -rw-r--r-- 1 boincer umatlas      2784 Dec  2 11:50 pandaJob.out
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas        57 Dec  2 11:50 setup.sh.local
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas    988852 Dec  2 11:51 agis_schedconf.cvmfs.json
[2025-12-02 18:56:54] drwx------ 5 boincer umatlas      4096 Dec  2 11:51 pilot3
[2025-12-02 18:56:54] -rw-r--r-- 1 boincer umatlas       533 Dec  2 18:46 boinc_task_state.xml
[2025-12-02 18:56:54] -rw-r--r-- 1 boincer umatlas      5956 Dec  2 18:49 init_data.xml
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas 912558818 Dec  2 18:55 HITS.47556137._003868.pool.root.1
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas      1061 Dec  2 18:55 memory_monitor_summary.json
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas   1516240 Dec  2 18:56 agis_ddmendpoints.agis.ALL.json
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas   2163576 Dec  2 18:56 log.47556137._003868.job.log.tgz.1
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas        95 Dec  2 18:56 pilot_heartbeat.json
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas      8677 Dec  2 18:56 heartbeat.json
[2025-12-02 18:56:54] -rw-r--r-- 1 boincer umatlas      8192 Dec  2 18:56 boinc_mmap_file
[2025-12-02 18:56:54] -rw-r--r-- 1 boincer umatlas        29 Dec  2 18:56 wrapper_checkpoint.txt
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas      4624 Dec  2 18:56 pilotlog.txt
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas   3567993 Dec  2 18:56 log.47556137._003868.job.log.1
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas       353 Dec  2 18:56 output.list
[2025-12-02 18:56:54] -rw-r--r-- 1 boincer umatlas       620 Dec  2 18:56 runtime_log
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas   5754880 Dec  2 18:56 result.tar.gz
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas       670 Dec  2 18:56 Z08NDmlR3g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm57HKDmQ59MHo.diag
[2025-12-02 18:56:54] -rw-r--r-- 1 boincer umatlas      9345 Dec  2 18:56 runtime_log.err
[2025-12-02 18:56:54] -rw-r--r-- 1 boincer umatlas     21211 Dec  2 18:56 stderr.txt
[2025-12-02 18:56:54] HITS file was successfully produced:
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas 912558818 Dec  2 18:55 shared/HITS.pool.root.1
[2025-12-02 18:56:54]  *** Contents of shared directory: ***
[2025-12-02 18:56:54] total 1298820
[2025-12-02 18:56:54] -rw-r--r-- 2 boincer umatlas 411059038 Dec  2 11:50 ATLAS.root_0
[2025-12-02 18:56:54] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 11:50 start_atlas.sh
[2025-12-02 18:56:54] -rw-r--r-- 2 boincer umatlas    590104 Dec  2 11:50 input.tar.gz
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas 912558818 Dec  2 18:55 HITS.pool.root.1
[2025-12-02 18:56:54] -rw------- 1 boincer umatlas   5754880 Dec  2 18:56 result.tar.gz
18:56:55 (2978): run_atlas exited; CPU time 286265.876424
18:56:55 (2978): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN