Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:09:06 (21075): wrapper (7.7.26015): starting
11:09:06 (21075): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 11:09:06] Arguments: --nthreads 8
[2025-12-02 11:09:06] Threads: 8
[2025-12-02 11:09:06] Checking for CVMFS
[2025-12-02 11:09:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 11:09:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 11:09:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 11:09:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 11:09:07] 2.11.2.0 2880 162258 87228 153560 3 69 17217061 20275201 1 130560 0 63083750 99.972 5983915 23047 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 11:09:07] CVMFS is ok
[2025-12-02 11:09:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 11:09:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 11:09:07] Further information can be found at the LHC@home message board.
[2025-12-02 11:09:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 11:09:07] Checking for apptainer binary...
[2025-12-02 11:09:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 11:09:07] Running /usr/bin/apptainer --version
[2025-12-02 11:09:07] apptainer version 1.3.2-1.el7
[2025-12-02 11:09:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 11:09:09] c-115-10.aglt2.org
[2025-12-02 11:09:09] apptainer works
[2025-12-02 11:09:09] Set ATHENA_PROC_NUMBER=8
[2025-12-02 11:09:09] Set ATHENA_CORE_NUMBER=8
[2025-12-02 11:09:09] Starting ATLAS job with PandaID=6895333593
[2025-12-02 11:09:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 22:33:03]  *** The last 200 lines of the pilot log: ***
[2025-12-02 22:33:03] 2025-12-03 03:32:27,511 | INFO     | monitor loop #2996: job 0:6895333593 is in state 'finished'
[2025-12-02 22:33:03] 2025-12-03 03:32:27,511 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 22:33:03] 2025-12-03 03:32:27,514 | INFO     | time since job start (40981s) is within the limit (172800.0s)
[2025-12-02 22:33:03] 2025-12-03 03:32:29,515 | INFO     | time since job start (40983s) is within the limit (172800.0s)
[2025-12-02 22:33:03] 2025-12-03 03:32:29,880 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-02 22:33:03] 2025-12-03 03:32:29,884 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-12-02 22:33:03] 2025-12-03 03:32:29,886 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895333593/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 22:33:03] 2025-12-03 03:32:29,887 | INFO     | extracted standard info from prmon json
[2025-12-02 22:33:03] 2025-12-03 03:32:29,887 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 22:33:03] 2025-12-03 03:32:29,887 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 22:33:03] 2025-12-03 03:32:29,897 | INFO     | fitting pss+swap vs Time
[2025-12-02 22:33:03] 2025-12-03 03:32:29,898 | INFO     | sum of square deviations: 94099351438.64293
[2025-12-02 22:33:03] 2025-12-03 03:32:29,906 | INFO     | sum of deviations: 770735288263.8392
[2025-12-02 22:33:03] 2025-12-03 03:32:29,907 | INFO     | mean x: 1764712264.0892856
[2025-12-02 22:33:03] 2025-12-03 03:32:29,907 | INFO     | mean y: 2986693.1026785714
[2025-12-02 22:33:03] 2025-12-03 03:32:29,907 | INFO     | intersect: -14451161978.181759
[2025-12-02 22:33:03] 2025-12-03 03:32:29,908 | INFO     | chi2: 5.558717552032331
[2025-12-02 22:33:03] 2025-12-03 03:32:29,908 | INFO     | sum of square deviations: 92014633126.89365
[2025-12-02 22:33:03] 2025-12-03 03:32:29,917 | INFO     | sum of deviations: 994326024379.3304
[2025-12-02 22:33:03] 2025-12-03 03:32:29,917 | INFO     | mean x: 1764712111.593703
[2025-12-02 22:33:03] 2025-12-03 03:32:29,917 | INFO     | mean y: 3003037.554722639
[2025-12-02 22:33:03] 2025-12-03 03:32:29,917 | INFO     | intersect: -19066780957.292984
[2025-12-02 22:33:03] 2025-12-03 03:32:29,918 | INFO     | chi2: 2.5713569295840655
[2025-12-02 22:33:03] 2025-12-03 03:32:29,918 | INFO     | current chi2=2.5713569295840655 (change=53.741903496356855 %)
[2025-12-02 22:33:03] 2025-12-03 03:32:29,919 | INFO     | sum of square deviations: 89960938652.61803
[2025-12-02 22:33:03] 2025-12-03 03:32:29,927 | INFO     | sum of deviations: 1023213753828.2755
[2025-12-02 22:33:03] 2025-12-03 03:32:29,927 | INFO     | mean x: 1764711959.0981872
[2025-12-02 22:33:03] 2025-12-03 03:32:29,927 | INFO     | mean y: 3005171.980362538
[2025-12-02 22:33:03] 2025-12-03 03:32:29,927 | INFO     | intersect: -20068790155.401516
[2025-12-02 22:33:03] 2025-12-03 03:32:29,928 | INFO     | chi2: 2.398040573631661
[2025-12-02 22:33:03] 2025-12-03 03:32:29,928 | INFO     | current chi2=2.398040573631661 (change=6.740268297969811 %)
[2025-12-02 22:33:03] 2025-12-03 03:32:29,928 | INFO     | right removable region: 661
[2025-12-02 22:33:03] 2025-12-03 03:32:29,929 | INFO     | sum of square deviations: 92014391566.89372
[2025-12-02 22:33:03] 2025-12-03 03:32:29,937 | INFO     | sum of deviations: 579482076935.5338
[2025-12-02 22:33:03] 2025-12-03 03:32:29,937 | INFO     | mean x: 1764712416.593703
[2025-12-02 22:33:03] 2025-12-03 03:32:29,937 | INFO     | mean y: 3000660.07946027
[2025-12-02 22:33:03] 2025-12-03 03:32:29,937 | INFO     | intersect: -11110687089.713549
[2025-12-02 22:33:03] 2025-12-03 03:32:29,938 | INFO     | chi2: 3.4049079415075045
[2025-12-02 22:33:03] 2025-12-03 03:32:29,938 | INFO     | current chi2=3.4049079415075045 (change=38.74652004467053 %)
[2025-12-02 22:33:03] 2025-12-03 03:32:29,939 | INFO     | sum of square deviations: 89960536541.00485
[2025-12-02 22:33:03] 2025-12-03 03:32:29,947 | INFO     | sum of deviations: 528341655168.61505
[2025-12-02 22:33:03] 2025-12-03 03:32:29,947 | INFO     | mean x: 1764712569.0951662
[2025-12-02 22:33:03] 2025-12-03 03:32:29,947 | INFO     | mean y: 3004454.910876133
[2025-12-02 22:33:03] 2025-12-03 03:32:29,947 | INFO     | intersect: -10361219631.587494
[2025-12-02 22:33:03] 2025-12-03 03:32:29,948 | INFO     | chi2: 3.3260078654988043
[2025-12-02 22:33:03] 2025-12-03 03:32:29,948 | INFO     | current chi2=3.3260078654988043 (change=2.3172454986776416 %)
[2025-12-02 22:33:03] 2025-12-03 03:32:29,948 | INFO     | left removable region: 20
[2025-12-02 22:33:03] 2025-12-03 03:32:29,949 | INFO     | sum of square deviations: 81668267690.92973
[2025-12-02 22:33:03] 2025-12-03 03:32:29,957 | INFO     | sum of deviations: 706326817402.4509
[2025-12-02 22:33:03] 2025-12-03 03:32:29,957 | INFO     | mean x: 1764712538.6068642
[2025-12-02 22:33:03] 2025-12-03 03:32:29,957 | INFO     | mean y: 3028951.124804992
[2025-12-02 22:33:03] 2025-12-03 03:32:29,957 | INFO     | intersect: -15259493767.510273
[2025-12-02 22:33:03] 2025-12-03 03:32:29,958 | INFO     | chi2: 0.10092744411836034
[2025-12-02 22:33:03] 2025-12-03 03:32:29,958 | INFO     | current memory leak: 8.65 B/s (using 641 data points, chi2=0.10)
[2025-12-02 22:33:03] 2025-12-03 03:32:29,959 | INFO     | could have reported an average CPU frequency of 2403 MHz (26 samples)
[2025-12-02 22:33:03] 2025-12-03 03:32:29,959 | INFO     | ..............................
[2025-12-02 22:33:03] 2025-12-03 03:32:29,959 | INFO     | . Timing measurements:
[2025-12-02 22:33:03] 2025-12-03 03:32:29,959 | INFO     | . get job = 0 s
[2025-12-02 22:33:03] 2025-12-03 03:32:29,959 | INFO     | . initial setup = 2 s
[2025-12-02 22:33:03] 2025-12-03 03:32:29,959 | INFO     | . payload setup = 9 s
[2025-12-02 22:33:03] 2025-12-03 03:32:29,959 | INFO     | . stage-in = 0 s
[2025-12-02 22:33:03] 2025-12-03 03:32:29,959 | INFO     | . payload execution = 40942 s
[2025-12-02 22:33:03] 2025-12-03 03:32:29,959 | INFO     | . stage-out = 3 s
[2025-12-02 22:33:03] 2025-12-03 03:32:29,960 | INFO     | . log creation = 0 s
[2025-12-02 22:33:03] 2025-12-03 03:32:29,960 | INFO     | ..............................
[2025-12-02 22:33:03] 2025-12-03 03:32:30,187 | INFO     | 
[2025-12-02 22:33:03] 2025-12-03 03:32:30,187 | INFO     | job summary report
[2025-12-02 22:33:03] 2025-12-03 03:32:30,187 | INFO     | --------------------------------------------------
[2025-12-02 22:33:03] 2025-12-03 03:32:30,188 | INFO     | PanDA job id: 6895333593
[2025-12-02 22:33:03] 2025-12-03 03:32:30,188 | INFO     | task id: 47556137
[2025-12-02 22:33:03] 2025-12-03 03:32:30,188 | INFO     | errors: (none)
[2025-12-02 22:33:03] 2025-12-03 03:32:30,188 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 22:33:03] 2025-12-03 03:32:30,188 | INFO     | pilot state: finished 
[2025-12-02 22:33:03] 2025-12-03 03:32:30,188 | INFO     | transexitcode: 0
[2025-12-02 22:33:03] 2025-12-03 03:32:30,189 | INFO     | exeerrorcode: 0
[2025-12-02 22:33:03] 2025-12-03 03:32:30,189 | INFO     | exeerrordiag: 
[2025-12-02 22:33:03] 2025-12-03 03:32:30,189 | INFO     | exitcode: 0
[2025-12-02 22:33:03] 2025-12-03 03:32:30,189 | INFO     | exitmsg: OK
[2025-12-02 22:33:03] 2025-12-03 03:32:30,189 | INFO     | cpuconsumptiontime: 319187 s
[2025-12-02 22:33:03] 2025-12-03 03:32:30,190 | INFO     | nevents: 1000
[2025-12-02 22:33:03] 2025-12-03 03:32:30,190 | INFO     | neventsw: 0
[2025-12-02 22:33:03] 2025-12-03 03:32:30,190 | INFO     | pid: 31240
[2025-12-02 22:33:03] 2025-12-03 03:32:30,190 | INFO     | pgrp: 31240
[2025-12-02 22:33:03] 2025-12-03 03:32:30,190 | INFO     | corecount: 8
[2025-12-02 22:33:03] 2025-12-03 03:32:30,190 | INFO     | event service: False
[2025-12-02 22:33:03] 2025-12-03 03:32:30,191 | INFO     | sizes: {0: 2284315, 1: 2284315, 6: 2284605, 11: 2284633, 40955: 2328535, 40958: 2337713, 40966: 2337931}
[2025-12-02 22:33:03] 2025-12-03 03:32:30,191 | INFO     | --------------------------------------------------
[2025-12-02 22:33:03] 2025-12-03 03:32:30,191 | INFO     | 
[2025-12-02 22:33:03] 2025-12-03 03:32:30,191 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-02 22:33:03] 2025-12-03 03:32:30,222 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,223 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,223 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,223 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,223 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,223 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,226 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,226 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 22:33:03] 2025-12-03 03:32:30,226 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,226 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 22:33:03] 2025-12-03 03:32:30,226 | INFO     | job 6895333593 has completed (purged errors)
[2025-12-02 22:33:03] 2025-12-03 03:32:30,227 | INFO     | overall cleanup function is called
[2025-12-02 22:33:03] 2025-12-03 03:32:31,242 | INFO     | --- collectZombieJob: --- 10, [31240]
[2025-12-02 22:33:03] 2025-12-03 03:32:31,242 | INFO     | zombie collector waiting for pid 31240
[2025-12-02 22:33:03] 2025-12-03 03:32:31,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 22:33:03] 2025-12-03 03:32:31,243 | INFO     | collected zombie processes
[2025-12-02 22:33:03] 2025-12-03 03:32:31,243 | INFO     | will attempt to kill all subprocesses of pid=31240
[2025-12-02 22:33:03] 2025-12-03 03:32:31,329 | INFO     | process IDs to be killed: [31240] (in reverse order)
[2025-12-02 22:33:03] 2025-12-03 03:32:31,386 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 22:33:03] 2025-12-03 03:32:31,386 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 22:33:03] 2025-12-03 03:32:31,390 | INFO     | did not find any defunct processes belonging to 31240
[2025-12-02 22:33:03] 2025-12-03 03:32:31,394 | INFO     | did not find any defunct processes belonging to 31240
[2025-12-02 22:33:03] 2025-12-03 03:32:31,397 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 22:33:03] 2025-12-03 03:32:31,397 | INFO     | ready for new job
[2025-12-02 22:33:03] 2025-12-03 03:32:31,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 22:33:03] 2025-12-03 03:32:31,400 | INFO     | ***************************************
[2025-12-02 22:33:03] 2025-12-03 03:32:31,400 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 22:33:03] 2025-12-03 03:32:31,401 | INFO     | ***************************************
[2025-12-02 22:33:03] 2025-12-03 03:32:31,401 | INFO     | 
[2025-12-02 22:33:03] 2025-12-03 03:32:31,401 | INFO     | architecture information:
[2025-12-02 22:33:03] 2025-12-03 03:32:31,402 | INFO     | executing command: cat /etc/os-release
[2025-12-02 22:33:03] 2025-12-03 03:32:31,423 | INFO     | cat /etc/os-release:
[2025-12-02 22:33:03] NAME="CentOS Linux"
[2025-12-02 22:33:03] VERSION="7 (Core)"
[2025-12-02 22:33:03] ID="centos"
[2025-12-02 22:33:03] ID_LIKE="rhel fedora"
[2025-12-02 22:33:03] VERSION_ID="7"
[2025-12-02 22:33:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 22:33:03] ANSI_COLOR="0;31"
[2025-12-02 22:33:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 22:33:03] HOME_URL="https://www.centos.org/"
[2025-12-02 22:33:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 22:33:03] 
[2025-12-02 22:33:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 22:33:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 22:33:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 22:33:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 22:33:03] 
[2025-12-02 22:33:03] 2025-12-03 03:32:31,423 | INFO     | ***************************************
[2025-12-02 22:33:03] 2025-12-03 03:32:31,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-02 22:33:03] 2025-12-03 03:32:31,947 | INFO     | sufficient remaining disk space (17468227584 B)
[2025-12-02 22:33:03] 2025-12-03 03:32:31,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 22:33:03] 2025-12-03 03:32:31,948 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 22:33:03] 2025-12-03 03:32:31,949 | INFO     | update_server=False
[2025-12-02 22:33:03] 2025-12-03 03:32:31,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 22:33:03] 2025-12-03 03:32:31,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 22:33:03] 2025-12-03 03:32:31,950 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 22:33:03] 2025-12-03 03:32:31,950 | INFO     | aborting loop
[2025-12-02 22:33:03] 2025-12-03 03:32:32,384 | INFO     | all payload control threads have been joined
[2025-12-02 22:33:03] 2025-12-03 03:32:32,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 22:33:03] 2025-12-03 03:32:32,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 22:33:03] 2025-12-03 03:32:32,854 | INFO     | all data control threads have been joined
[2025-12-02 22:33:03] 2025-12-03 03:32:32,953 | INFO     | [job] job monitor thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:32,954 | INFO     | [job] retrieve thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:32,955 | INFO     | [job] queue monitor thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:32,987 | INFO     | all job control threads have been joined
[2025-12-02 22:33:03] 2025-12-03 03:32:33,149 | INFO     | [data] copytool_in thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:33,179 | INFO     | [job] validate thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:33,389 | INFO     | [payload] control thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:33,860 | INFO     | [data] control thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:33,957 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:33,960 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:33,992 | INFO     | [job] control thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:33,995 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:33,996 | INFO     | [monitor] cgroup control has ended
[2025-12-02 22:33:03] 2025-12-03 03:32:34,129 | INFO     | [payload] validate_post thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:34,160 | INFO     | [payload] failed_post thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:34,456 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:34,732 | INFO     | [data] copytool_out thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:36,819 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 22:33:03] 2025-12-03 03:32:38,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819566962496)>', '<ExcThread(monitor, started 139818700896000)>']
[2025-12-02 22:33:03] 2025-12-03 03:32:43,595 | INFO     | all workflow threads have been joined
[2025-12-02 22:33:03] 2025-12-03 03:32:43,596 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 22:33:03] 2025-12-03 03:32:43,596 | INFO     | traces error code: 0
[2025-12-02 22:33:03] 2025-12-03 03:32:43,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 22:33:03] 2025-12-03 03:33:02,720 | INFO     | PID=24749 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-02 22:33:03] 2025-12-03 03:33:02,721 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 22:33:03] 2025-12-03 03:33:02,721 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 22:33:03] 2025-12-03 03:33:02,722 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 22:33:03] 2025-12-03 03:33:02,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 22:33:03] 2025-12-03 03:33:02,722 | INFO     | [monitor] control thread has ended
[2025-12-02 22:33:03] 2025-12-03 03:33:02,836 [wrapper] ==== pilot stdout END ====
[2025-12-02 22:33:03] 2025-12-03 03:33:02,841 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 22:33:03] 2025-12-03 03:33:02,846 [wrapper] pilotpid: 24749
[2025-12-02 22:33:03] 2025-12-03 03:33:02,850 [wrapper] Pilot exit status: 0
[2025-12-02 22:33:03] 2025-12-03 03:33:02,867 [wrapper] pandaids: 6895333593
[2025-12-02 22:33:03] 2025-12-03 03:33:02,908 [wrapper] cleanup supervisor_pilot 18582 24750
[2025-12-02 22:33:03] 2025-12-03 03:33:02,913 [wrapper] Test setup, not cleaning
[2025-12-02 22:33:03] 2025-12-03 03:33:02,918 [wrapper] apfmon messages muted
[2025-12-02 22:33:03] 2025-12-03 03:33:02,923 [wrapper] ==== wrapper stdout END ====
[2025-12-02 22:33:03] 2025-12-03 03:33:02,928 [wrapper] ==== wrapper stderr END ====
[2025-12-02 22:33:03]  *** Error codes and diagnostics ***
[2025-12-02 22:33:03]     "exeErrorCode": 0,
[2025-12-02 22:33:03]     "exeErrorDiag": "",
[2025-12-02 22:33:03]     "pilotErrorCode": 0,
[2025-12-02 22:33:03]     "pilotErrorDiag": "",
[2025-12-02 22:33:03]  *** Listing of results directory ***
[2025-12-02 22:33:03] total 1319192
[2025-12-02 22:33:03] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 20:38 pilot3.tar.gz
[2025-12-02 22:33:03] -rwx------ 1 boincer umatlas     36292 Nov 21 20:47 runpilot2-wrapper.sh
[2025-12-02 22:33:03] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 20:47 queuedata.json
[2025-12-02 22:33:03] -rw-r--r-- 1 boincer umatlas       100 Dec  2 11:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 22:33:03] -rwxr-xr-x 1 boincer umatlas      7986 Dec  2 11:09 run_atlas
[2025-12-02 22:33:03] -rw-r--r-- 1 boincer umatlas       105 Dec  2 11:09 job.xml
[2025-12-02 22:33:03] -rw-r--r-- 2 boincer umatlas 408715327 Dec  2 11:09 EVNT.47483658._000206.pool.root.1
[2025-12-02 22:33:03] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 11:09 start_atlas.sh
[2025-12-02 22:33:03] drwxrwx--x 2 boincer umatlas      4096 Dec  2 11:09 shared
[2025-12-02 22:33:03] -rw-r--r-- 2 boincer umatlas    590094 Dec  2 11:09 input.tar.gz
[2025-12-02 22:33:03] -rw-r--r-- 1 boincer umatlas         0 Dec  2 11:09 boinc_lockfile
[2025-12-02 22:33:03] -rw-r--r-- 1 boincer umatlas      2786 Dec  2 11:09 pandaJob.out
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas        57 Dec  2 11:09 setup.sh.local
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas    989202 Dec  2 11:09 agis_schedconf.cvmfs.json
[2025-12-02 22:33:03] drwx------ 5 boincer umatlas      4096 Dec  2 11:09 pilot3
[2025-12-02 22:33:03] -rw-r--r-- 1 boincer umatlas       533 Dec  2 22:23 boinc_task_state.xml
[2025-12-02 22:33:03] -rw-r--r-- 1 boincer umatlas      5913 Dec  2 22:31 init_data.xml
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas 923030640 Dec  2 22:31 HITS.47556137._002027.pool.root.1
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas      1061 Dec  2 22:32 memory_monitor_summary.json
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas   1516240 Dec  2 22:32 agis_ddmendpoints.agis.ALL.json
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas   1940683 Dec  2 22:32 log.47556137._002027.job.log.tgz.1
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas      8675 Dec  2 22:32 heartbeat.json
[2025-12-02 22:33:03] -rw-r--r-- 1 boincer umatlas      8192 Dec  2 22:32 boinc_mmap_file
[2025-12-02 22:33:03] -rw-r--r-- 1 boincer umatlas        29 Dec  2 22:32 wrapper_checkpoint.txt
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas        95 Dec  2 22:33 pilot_heartbeat.json
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas       745 Dec  2 22:33 pilotlog.txt
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas   5653256 Dec  2 22:33 log.47556137._002027.job.log.1
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas       353 Dec  2 22:33 output.list
[2025-12-02 22:33:03] -rw-r--r-- 1 boincer umatlas       620 Dec  2 22:33 runtime_log
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas   7618560 Dec  2 22:33 result.tar.gz
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas       668 Dec  2 22:33 YF4MDmvtrg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgqJKDmrb00Rm.diag
[2025-12-02 22:33:03] -rw-r--r-- 1 boincer umatlas      9343 Dec  2 22:33 runtime_log.err
[2025-12-02 22:33:03] -rw-r--r-- 1 boincer umatlas     21298 Dec  2 22:33 stderr.txt
[2025-12-02 22:33:03] HITS file was successfully produced:
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas 923030640 Dec  2 22:31 shared/HITS.pool.root.1
[2025-12-02 22:33:03]  *** Contents of shared directory: ***
[2025-12-02 22:33:03] total 1308580
[2025-12-02 22:33:03] -rw-r--r-- 2 boincer umatlas 408715327 Dec  2 11:09 ATLAS.root_0
[2025-12-02 22:33:03] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 11:09 start_atlas.sh
[2025-12-02 22:33:03] -rw-r--r-- 2 boincer umatlas    590094 Dec  2 11:09 input.tar.gz
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas 923030640 Dec  2 22:31 HITS.pool.root.1
[2025-12-02 22:33:03] -rw------- 1 boincer umatlas   7618560 Dec  2 22:33 result.tar.gz
22:33:04 (21075): run_atlas exited; CPU time 316699.948939
22:33:04 (21075): called boinc_finish(0)

</stderr_txt>
]]>

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