Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
10:48:04 (2370597): wrapper (7.7.26015): starting
10:48:04 (2370597): wrapper: running run_atlas (--nthreads 4)
[2025-12-02 10:48:04] Arguments: --nthreads 4
[2025-12-02 10:48:04] Threads: 4
[2025-12-02 10:48:04] Checking for CVMFS
[2025-12-02 10:48:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 10:48:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 10:48:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 10:48:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 10:48:04] 2.13.3.0 3932 2827 66164 153564 0 101 3558963 20480000 5053 130560 0 7395288 99.817 1263298 894 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-02 10:48:04] CVMFS is ok
[2025-12-02 10:48:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 10:48:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-02 10:48:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-02 10:48:04] Further information can be found at the LHC@home message board.
[2025-12-02 10:48:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 10:48:04] Checking for apptainer binary...
[2025-12-02 10:48:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 10:48:04] Running /usr/bin/apptainer --version
[2025-12-02 10:48:04] apptainer version 1.4.3
[2025-12-02 10:48:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 10:48:04] phantom
[2025-12-02 10:48:04] apptainer works
[2025-12-02 10:48:04] Set ATHENA_PROC_NUMBER=4
[2025-12-02 10:48:04] Set ATHENA_CORE_NUMBER=4
[2025-12-02 10:48:04] Starting ATLAS job with PandaID=6894266402
[2025-12-02 10:48:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 20:43:18]  *** The last 200 lines of the pilot log: ***
[2025-12-02 20:43:18] 2025-12-03 03:42:09,748 | INFO     | 35639s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-02 20:43:18] 2025-12-03 03:42:10,012 | INFO     | monitor loop #2671: job 0:6894266402 is in state 'finished'
[2025-12-02 20:43:18] 2025-12-03 03:42:10,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 20:43:18] 2025-12-03 03:42:11,327 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 20:43:18] 2025-12-03 03:42:11,330 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4043.8085625
[2025-12-02 20:43:18] 2025-12-03 03:42:11,334 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6894266402/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 20:43:18] 2025-12-03 03:42:11,335 | INFO     | extracted standard info from prmon json
[2025-12-02 20:43:18] 2025-12-03 03:42:11,335 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 20:43:18] 2025-12-03 03:42:11,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 20:43:18] 2025-12-03 03:42:11,341 | INFO     | fitting pss+swap vs Time
[2025-12-02 20:43:18] 2025-12-03 03:42:11,342 | INFO     | sum of square deviations: 61761195210.0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,347 | INFO     | sum of deviations: 230883550670.49994
[2025-12-02 20:43:18] 2025-12-03 03:42:11,347 | INFO     | mean x: 1764715497.5
[2025-12-02 20:43:18] 2025-12-03 03:42:11,347 | INFO     | mean y: 2257337.0428082193
[2025-12-02 20:43:18] 2025-12-03 03:42:11,347 | INFO     | intersect: -6594826456.440627
[2025-12-02 20:43:18] 2025-12-03 03:42:11,348 | INFO     | chi2: 3.4345158403234333
[2025-12-02 20:43:18] 2025-12-03 03:42:11,348 | INFO     | sum of square deviations: 60188402930.0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,353 | INFO     | sum of deviations: 323352221673.0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,354 | INFO     | mean x: 1764715345.0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,354 | INFO     | mean y: 2266279.402417962
[2025-12-02 20:43:18] 2025-12-03 03:42:11,354 | INFO     | intersect: -9478374502.67365
[2025-12-02 20:43:18] 2025-12-03 03:42:11,354 | INFO     | chi2: 1.7015636756958898
[2025-12-02 20:43:18] 2025-12-03 03:42:11,354 | INFO     | current chi2=1.7015636756958898 (change=50.456956531734875 %)
[2025-12-02 20:43:18] 2025-12-03 03:42:11,355 | INFO     | sum of square deviations: 58642541387.5
[2025-12-02 20:43:18] 2025-12-03 03:42:11,360 | INFO     | sum of deviations: 318461890042.0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,360 | INFO     | mean x: 1764715192.5
[2025-12-02 20:43:18] 2025-12-03 03:42:11,360 | INFO     | mean y: 2265796.951219512
[2025-12-02 20:43:18] 2025-12-03 03:42:11,360 | INFO     | intersect: -9581127458.054852
[2025-12-02 20:43:18] 2025-12-03 03:42:11,360 | INFO     | chi2: 1.7010103248938664
[2025-12-02 20:43:18] 2025-12-03 03:42:11,360 | INFO     | current chi2=1.7010103248938664 (change=0.03252013485755397 %)
[2025-12-02 20:43:18] 2025-12-03 03:42:11,361 | INFO     | right removable region: 573
[2025-12-02 20:43:18] 2025-12-03 03:42:11,361 | INFO     | sum of square deviations: 60188402930.0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,366 | INFO     | sum of deviations: 139640961612.0001
[2025-12-02 20:43:18] 2025-12-03 03:42:11,366 | INFO     | mean x: 1764715650.0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,366 | INFO     | mean y: 2266151.723661485
[2025-12-02 20:43:18] 2025-12-03 03:42:11,366 | INFO     | intersect: -4091987530.7397785
[2025-12-02 20:43:18] 2025-12-03 03:42:11,367 | INFO     | chi2: 1.811857530078845
[2025-12-02 20:43:18] 2025-12-03 03:42:11,367 | INFO     | current chi2=1.811857530078845 (change=47.245620217951306 %)
[2025-12-02 20:43:18] 2025-12-03 03:42:11,367 | INFO     | sum of square deviations: 58642541387.5
[2025-12-02 20:43:18] 2025-12-03 03:42:11,373 | INFO     | sum of deviations: 135609376604.50006
[2025-12-02 20:43:18] 2025-12-03 03:42:11,373 | INFO     | mean x: 1764715802.5
[2025-12-02 20:43:18] 2025-12-03 03:42:11,373 | INFO     | mean y: 2266548.5209059236
[2025-12-02 20:43:18] 2025-12-03 03:42:11,373 | INFO     | intersect: -4078593594.9677906
[2025-12-02 20:43:18] 2025-12-03 03:42:11,373 | INFO     | chi2: 1.811409985451357
[2025-12-02 20:43:18] 2025-12-03 03:42:11,373 | INFO     | current chi2=1.811409985451357 (change=0.024700873002338544 %)
[2025-12-02 20:43:18] 2025-12-03 03:42:11,373 | INFO     | left removable region: 20
[2025-12-02 20:43:18] 2025-12-03 03:42:11,374 | INFO     | sum of square deviations: 52438758092.0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,379 | INFO     | sum of deviations: 222589087352.0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,379 | INFO     | mean x: 1764715772.0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,379 | INFO     | mean y: 2275232.405063291
[2025-12-02 20:43:18] 2025-12-03 03:42:11,379 | INFO     | intersect: -7488490899.699163
[2025-12-02 20:43:18] 2025-12-03 03:42:11,379 | INFO     | chi2: 0.05183084772293909
[2025-12-02 20:43:18] 2025-12-03 03:42:11,379 | INFO     | current memory leak: 4.24 B/s (using 553 data points, chi2=0.05)
[2025-12-02 20:43:18] 2025-12-03 03:42:11,380 | INFO     | could have reported an average CPU frequency of 3990 MHz (23 samples)
[2025-12-02 20:43:18] 2025-12-03 03:42:11,380 | INFO     | ..............................
[2025-12-02 20:43:18] 2025-12-03 03:42:11,380 | INFO     | . Timing measurements:
[2025-12-02 20:43:18] 2025-12-03 03:42:11,380 | INFO     | . get job = 0 s
[2025-12-02 20:43:18] 2025-12-03 03:42:11,380 | INFO     | . initial setup = 3 s
[2025-12-02 20:43:18] 2025-12-03 03:42:11,380 | INFO     | . payload setup = 3 s
[2025-12-02 20:43:18] 2025-12-03 03:42:11,380 | INFO     | . stage-in = 0 s
[2025-12-02 20:43:18] 2025-12-03 03:42:11,380 | INFO     | . payload execution = 35603 s
[2025-12-02 20:43:18] 2025-12-03 03:42:11,380 | INFO     | . stage-out = 3 s
[2025-12-02 20:43:18] 2025-12-03 03:42:11,380 | INFO     | . log creation = 0 s
[2025-12-02 20:43:18] 2025-12-03 03:42:11,380 | INFO     | ..............................
[2025-12-02 20:43:18] 2025-12-03 03:42:11,443 | INFO     | 
[2025-12-02 20:43:18] 2025-12-03 03:42:11,443 | INFO     | job summary report
[2025-12-02 20:43:18] 2025-12-03 03:42:11,443 | INFO     | --------------------------------------------------
[2025-12-02 20:43:18] 2025-12-03 03:42:11,443 | INFO     | PanDA job id: 6894266402
[2025-12-02 20:43:18] 2025-12-03 03:42:11,443 | INFO     | task id: 47533967
[2025-12-02 20:43:18] 2025-12-03 03:42:11,443 | INFO     | errors: (none)
[2025-12-02 20:43:18] 2025-12-03 03:42:11,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 20:43:18] 2025-12-03 03:42:11,443 | INFO     | pilot state: finished 
[2025-12-02 20:43:18] 2025-12-03 03:42:11,443 | INFO     | transexitcode: 0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | exeerrorcode: 0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | exeerrordiag: 
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | exitcode: 0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | exitmsg: OK
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | cpuconsumptiontime: 141671 s
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | nevents: 1000
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | neventsw: 0
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | pid: 2381122
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | pgrp: 2381122
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | corecount: 4
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | event service: False
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | sizes: {0: 2284322, 3: 2284584, 11: 2284612, 35611: 2326203, 35615: 2335211, 35617: 2335267, 35623: 2335641}
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | --------------------------------------------------
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | 
[2025-12-02 20:43:18] 2025-12-03 03:42:11,444 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-12-02 20:43:18] 2025-12-03 03:42:11,458 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,458 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,458 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,458 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,458 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,458 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,458 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,458 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,458 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,458 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,458 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,458 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,458 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,459 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 20:43:18] 2025-12-03 03:42:11,459 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,459 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 20:43:18] 2025-12-03 03:42:11,459 | INFO     | job 6894266402 has completed (purged errors)
[2025-12-02 20:43:18] 2025-12-03 03:42:11,459 | INFO     | overall cleanup function is called
[2025-12-02 20:43:18] 2025-12-03 03:42:12,470 | INFO     | --- collectZombieJob: --- 10, [2381122]
[2025-12-02 20:43:18] 2025-12-03 03:42:12,470 | INFO     | zombie collector waiting for pid 2381122
[2025-12-02 20:43:18] 2025-12-03 03:42:12,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 20:43:18] 2025-12-03 03:42:12,470 | INFO     | collected zombie processes
[2025-12-02 20:43:18] 2025-12-03 03:42:12,470 | INFO     | will attempt to kill all subprocesses of pid=2381122
[2025-12-02 20:43:18] 2025-12-03 03:42:12,613 | INFO     | process IDs to be killed: [2381122] (in reverse order)
[2025-12-02 20:43:18] 2025-12-03 03:42:12,665 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 20:43:18] 2025-12-03 03:42:12,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 20:43:18] 2025-12-03 03:42:12,669 | INFO     | did not find any defunct processes belonging to 2381122
[2025-12-02 20:43:18] 2025-12-03 03:42:12,672 | INFO     | did not find any defunct processes belonging to 2381122
[2025-12-02 20:43:18] 2025-12-03 03:42:12,673 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 20:43:18] 2025-12-03 03:42:12,673 | INFO     | ready for new job
[2025-12-02 20:43:18] 2025-12-03 03:42:12,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 20:43:18] 2025-12-03 03:42:12,675 | INFO     | ***************************************
[2025-12-02 20:43:18] 2025-12-03 03:42:12,675 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 20:43:18] 2025-12-03 03:42:12,675 | INFO     | ***************************************
[2025-12-02 20:43:18] 2025-12-03 03:42:12,675 | INFO     | 
[2025-12-02 20:43:18] 2025-12-03 03:42:12,677 | INFO     | architecture information:
[2025-12-02 20:43:18] 2025-12-03 03:42:12,677 | INFO     | executing command: cat /etc/os-release
[2025-12-02 20:43:18] 2025-12-03 03:42:12,690 | INFO     | cat /etc/os-release:
[2025-12-02 20:43:18] NAME="CentOS Linux"
[2025-12-02 20:43:18] VERSION="7 (Core)"
[2025-12-02 20:43:18] ID="centos"
[2025-12-02 20:43:18] ID_LIKE="rhel fedora"
[2025-12-02 20:43:18] VERSION_ID="7"
[2025-12-02 20:43:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 20:43:18] ANSI_COLOR="0;31"
[2025-12-02 20:43:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 20:43:18] HOME_URL="https://www.centos.org/"
[2025-12-02 20:43:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 20:43:18] 
[2025-12-02 20:43:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 20:43:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 20:43:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 20:43:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 20:43:18] 
[2025-12-02 20:43:18] 2025-12-03 03:42:12,690 | INFO     | ***************************************
[2025-12-02 20:43:18] 2025-12-03 03:42:13,193 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-12-02 20:43:18] 2025-12-03 03:42:13,206 | INFO     | sufficient remaining disk space (417774698496 B)
[2025-12-02 20:43:18] 2025-12-03 03:42:13,206 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 20:43:18] 2025-12-03 03:42:13,206 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 20:43:18] 2025-12-03 03:42:13,206 | INFO     | update_server=False
[2025-12-02 20:43:18] 2025-12-03 03:42:13,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 20:43:18] 2025-12-03 03:42:13,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 20:43:18] 2025-12-03 03:42:13,311 | INFO     | all data control threads have been joined
[2025-12-02 20:43:18] 2025-12-03 03:42:13,519 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 20:43:18] 2025-12-03 03:42:13,519 | INFO     | aborting loop
[2025-12-02 20:43:18] 2025-12-03 03:42:14,001 | INFO     | all job control threads have been joined
[2025-12-02 20:43:18] 2025-12-03 03:42:14,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 20:43:18] 2025-12-03 03:42:14,210 | INFO     | [job] retrieve thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:14,211 | INFO     | [job] queue monitor thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:14,316 | INFO     | [data] control thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:14,458 | INFO     | all payload control threads have been joined
[2025-12-02 20:43:18] 2025-12-03 03:42:14,524 | INFO     | [job] job monitor thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:14,793 | INFO     | [job] validate thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:14,915 | INFO     | [payload] validate_post thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:15,005 | INFO     | [job] control thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:15,058 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:15,075 | INFO     | [data] copytool_in thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:15,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 20:43:18] 2025-12-03 03:42:15,125 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:15,213 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:15,453 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:15,463 | INFO     | [payload] control thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:15,672 | INFO     | [payload] failed_post thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:16,055 | INFO     | [data] copytool_out thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:19,085 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 20:43:18] 2025-12-03 03:42:42,966 | INFO     | PID=2374454 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 20:43:18] 2025-12-03 03:42:42,966 | INFO     | .. there are 7 such processes running
[2025-12-02 20:43:18] 2025-12-03 03:42:42,966 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 20:43:18] 2025-12-03 03:42:42,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 20:43:18] 2025-12-03 03:42:42,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 20:43:18] 2025-12-03 03:43:12,135 | INFO     | [monitor] cgroup control has ended
[2025-12-02 20:43:18] 2025-12-03 03:43:13,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125513862915904)>', '<ExcThread(monitor, started 125513054000896)>']
[2025-12-02 20:43:18] 2025-12-03 03:43:14,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 20:43:18] 2025-12-03 03:43:14,123 | INFO     | [monitor] control thread has ended
[2025-12-02 20:43:18] 2025-12-03 03:43:18,668 | INFO     | all workflow threads have been joined
[2025-12-02 20:43:18] 2025-12-03 03:43:18,668 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 20:43:18] 2025-12-03 03:43:18,668 | INFO     | traces error code: 0
[2025-12-02 20:43:18] 2025-12-03 03:43:18,668 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 20:43:18] 2025-12-03 03:43:18,734 [wrapper] ==== pilot stdout END ====
[2025-12-02 20:43:18] 2025-12-03 03:43:18,736 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 20:43:18] 2025-12-03 03:43:18,738 [wrapper] pilotpid: 2374454
[2025-12-02 20:43:18] 2025-12-03 03:43:18,740 [wrapper] Pilot exit status: 0
[2025-12-02 20:43:18] 2025-12-03 03:43:18,746 [wrapper] pandaids: 6894266402
[2025-12-02 20:43:18] 2025-12-03 03:43:18,778 [wrapper] cleanup supervisor_pilot 2832102 2374455
[2025-12-02 20:43:18] 2025-12-03 03:43:18,780 [wrapper] Test setup, not cleaning
[2025-12-02 20:43:18] 2025-12-03 03:43:18,782 [wrapper] apfmon messages muted
[2025-12-02 20:43:18] 2025-12-03 03:43:18,784 [wrapper] ==== wrapper stdout END ====
[2025-12-02 20:43:18] 2025-12-03 03:43:18,786 [wrapper] ==== wrapper stderr END ====
[2025-12-02 20:43:18]  *** Error codes and diagnostics ***
[2025-12-02 20:43:18]     "exeErrorCode": 0,
[2025-12-02 20:43:18]     "exeErrorDiag": "",
[2025-12-02 20:43:18]     "pilotErrorCode": 0,
[2025-12-02 20:43:18]     "pilotErrorDiag": "",
[2025-12-02 20:43:18]  *** Listing of results directory ***
[2025-12-02 20:43:18] total 1313216
[2025-12-02 20:43:18] -rw-r--r-- 1 boinc boinc    576529 Nov 20 22:09 pilot3.tar.gz
[2025-12-02 20:43:18] -rwx------ 1 boinc boinc     36292 Nov 20 22:13 runpilot2-wrapper.sh
[2025-12-02 20:43:18] -rw-r--r-- 1 boinc boinc      5112 Nov 20 22:13 queuedata.json
[2025-12-02 20:43:18] -rw-r--r-- 1 boinc boinc       100 Dec  2 10:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 20:43:18] -rwxr-xr-x 1 boinc boinc      7986 Dec  2 10:48 run_atlas
[2025-12-02 20:43:18] -rw-r--r-- 1 boinc boinc       105 Dec  2 10:48 job.xml
[2025-12-02 20:43:18] -rw-r--r-- 1 boinc boinc      9721 Dec  2 10:48 init_data.xml
[2025-12-02 20:43:18] -rw-r--r-- 2 boinc boinc 409269918 Dec  2 10:48 EVNT.47493127._002231.pool.root.1
[2025-12-02 20:43:18] -rw-r--r-- 2 boinc boinc     15847 Dec  2 10:48 start_atlas.sh
[2025-12-02 20:43:18] drwxrwx--x 2 boinc boinc      4096 Dec  2 10:48 shared
[2025-12-02 20:43:18] -rw-r--r-- 2 boinc boinc    590102 Dec  2 10:48 input.tar.gz
[2025-12-02 20:43:18] -rw-r--r-- 1 boinc boinc         0 Dec  2 10:48 boinc_lockfile
[2025-12-02 20:43:18] -rw-r--r-- 1 boinc boinc      2786 Dec  2 10:48 pandaJob.out
[2025-12-02 20:43:18] -rw------- 1 boinc boinc    988858 Dec  2 10:48 agis_schedconf.cvmfs.json
[2025-12-02 20:43:18] drwx------ 5 boinc boinc      4096 Dec  2 10:48 pilot3
[2025-12-02 20:43:18] -rw-r--r-- 1 boinc boinc       533 Dec  2 20:38 boinc_task_state.xml
[2025-12-02 20:43:18] -rw------- 1 boinc boinc 918531810 Dec  2 20:41 HITS.47533967._002026.pool.root.1
[2025-12-02 20:43:18] -rw------- 1 boinc boinc      1031 Dec  2 20:41 memory_monitor_summary.json
[2025-12-02 20:43:18] -rw------- 1 boinc boinc   1516240 Dec  2 20:42 agis_ddmendpoints.agis.ALL.json
[2025-12-02 20:43:18] -rw------- 1 boinc boinc   1392926 Dec  2 20:42 log.47533967._002026.job.log.tgz.1
[2025-12-02 20:43:18] -rw------- 1 boinc boinc        95 Dec  2 20:42 pilot_heartbeat.json
[2025-12-02 20:43:18] -rw------- 1 boinc boinc      8550 Dec  2 20:42 heartbeat.json
[2025-12-02 20:43:18] -rw-r--r-- 1 boinc boinc        29 Dec  2 20:43 wrapper_checkpoint.txt
[2025-12-02 20:43:18] -rw-r--r-- 1 boinc boinc      8192 Dec  2 20:43 boinc_mmap_file
[2025-12-02 20:43:18] -rw------- 1 boinc boinc      4831 Dec  2 20:43 pilotlog.txt
[2025-12-02 20:43:18] -rw------- 1 boinc boinc   5114828 Dec  2 20:43 log.47533967._002026.job.log.1
[2025-12-02 20:43:18] -rw------- 1 boinc boinc       353 Dec  2 20:43 output.list
[2025-12-02 20:43:18] -rw-r--r-- 1 boinc boinc       620 Dec  2 20:43 runtime_log
[2025-12-02 20:43:18] -rw------- 1 boinc boinc   6522880 Dec  2 20:43 result.tar.gz
[2025-12-02 20:43:18] -rw-r--r-- 1 boinc boinc      8920 Dec  2 20:43 runtime_log.err
[2025-12-02 20:43:18] -rw------- 1 boinc boinc       662 Dec  2 20:43 3QELDmadYg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6LHKDmBPEF9n.diag
[2025-12-02 20:43:18] -rw-r--r-- 1 boinc boinc     21347 Dec  2 20:43 stderr.txt
[2025-12-02 20:43:18] HITS file was successfully produced:
[2025-12-02 20:43:18] -rw------- 1 boinc boinc 918531810 Dec  2 20:41 shared/HITS.pool.root.1
[2025-12-02 20:43:18]  *** Contents of shared directory: ***
[2025-12-02 20:43:18] total 1303660
[2025-12-02 20:43:18] -rw-r--r-- 2 boinc boinc 409269918 Dec  2 10:48 ATLAS.root_0
[2025-12-02 20:43:18] -rw-r--r-- 2 boinc boinc     15847 Dec  2 10:48 start_atlas.sh
[2025-12-02 20:43:18] -rw-r--r-- 2 boinc boinc    590102 Dec  2 10:48 input.tar.gz
[2025-12-02 20:43:18] -rw------- 1 boinc boinc 918531810 Dec  2 20:41 HITS.pool.root.1
[2025-12-02 20:43:18] -rw------- 1 boinc boinc   6522880 Dec  2 20:43 result.tar.gz
20:43:19 (2370597): run_atlas exited; CPU time 141869.866485
20:43:19 (2370597): called boinc_finish(0)

</stderr_txt>
]]>

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