Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:07:25 (18709): wrapper (7.7.26015): starting
10:07:25 (18709): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 10:07:25] Arguments: --nthreads 8
[2025-12-02 10:07:25] Threads: 8
[2025-12-02 10:07:25] Checking for CVMFS
[2025-12-02 10:07:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 10:07:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 10:07:25] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 10:07:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 10:07:26] 2.11.2.0 10816 126454 138896 153559 1 79 12279868 18432001 1858 130560 0 92548697 99.976 5304442 28991 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 10:07:26] CVMFS is ok
[2025-12-02 10:07:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 10:07:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 10:07:26] Further information can be found at the LHC@home message board.
[2025-12-02 10:07:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 10:07:26] Checking for apptainer binary...
[2025-12-02 10:07:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 10:07:26] Running /usr/bin/apptainer --version
[2025-12-02 10:07:26] apptainer version 1.3.2-1.el7
[2025-12-02 10:07:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 10:07:26] c-206-11.aglt2.org
[2025-12-02 10:07:26] apptainer works
[2025-12-02 10:07:26] Set ATHENA_PROC_NUMBER=8
[2025-12-02 10:07:26] Set ATHENA_CORE_NUMBER=8
[2025-12-02 10:07:26] Starting ATLAS job with PandaID=6895339733
[2025-12-02 10:07:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 04:26:28]  *** The last 200 lines of the pilot log: ***
[2025-12-03 04:26:28] 2025-12-03 09:25:47,551 | INFO     | time since job start (65890s) is within the limit (172800.0s)
[2025-12-03 04:26:28] 2025-12-03 09:25:48,110 | INFO     | monitor loop #4757: job 0:6895339733 is in state 'finished'
[2025-12-03 04:26:28] 2025-12-03 09:25:48,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 04:26:28] 2025-12-03 09:25:48,678 | INFO     | PID=22427 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-03 04:26:28] 2025-12-03 09:25:48,745 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-03 04:26:28] 2025-12-03 09:25:48,751 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1712.4166666666667
[2025-12-03 04:26:28] 2025-12-03 09:25:48,754 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895339733/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 04:26:28] 2025-12-03 09:25:48,754 | INFO     | extracted standard info from prmon json
[2025-12-03 04:26:28] 2025-12-03 09:25:48,754 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 04:26:28] 2025-12-03 09:25:48,755 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 04:26:28] 2025-12-03 09:25:48,770 | INFO     | fitting pss+swap vs Time
[2025-12-03 04:26:28] 2025-12-03 09:25:48,771 | INFO     | sum of square deviations: 390606794499.3249
[2025-12-03 04:26:28] 2025-12-03 09:25:48,794 | INFO     | sum of deviations: 2198572664667.3457
[2025-12-03 04:26:28] 2025-12-03 09:25:48,794 | INFO     | mean x: 1764720993.1416667
[2025-12-03 04:26:28] 2025-12-03 09:25:48,794 | INFO     | mean y: 2863597.05
[2025-12-03 04:26:28] 2025-12-03 09:25:48,794 | INFO     | intersect: -9930059718.477695
[2025-12-03 04:26:28] 2025-12-03 09:25:48,795 | INFO     | chi2: 5.114147231553657
[2025-12-03 04:26:28] 2025-12-03 09:25:48,796 | INFO     | sum of square deviations: 385206867402.2571
[2025-12-03 04:26:28] 2025-12-03 09:25:48,819 | INFO     | sum of deviations: 2511334946310.0127
[2025-12-03 04:26:28] 2025-12-03 09:25:48,819 | INFO     | mean x: 1764720840.6446512
[2025-12-03 04:26:28] 2025-12-03 09:25:48,819 | INFO     | mean y: 2872424.7330232556
[2025-12-03 04:26:28] 2025-12-03 09:25:48,819 | INFO     | intersect: -11502127855.972067
[2025-12-03 04:26:28] 2025-12-03 09:25:48,820 | INFO     | chi2: 2.5535139254128816
[2025-12-03 04:26:28] 2025-12-03 09:25:48,820 | INFO     | current chi2=2.5535139254128816 (change=50.06960476894338 %)
[2025-12-03 04:26:28] 2025-12-03 09:25:48,821 | INFO     | sum of square deviations: 379856941242.66876
[2025-12-03 04:26:28] 2025-12-03 09:25:48,843 | INFO     | sum of deviations: 2551325461746.5947
[2025-12-03 04:26:28] 2025-12-03 09:25:48,843 | INFO     | mean x: 1764720688.1476636
[2025-12-03 04:26:28] 2025-12-03 09:25:48,844 | INFO     | mean y: 2873561.4392523365
[2025-12-03 04:26:28] 2025-12-03 09:25:48,844 | INFO     | intersect: -11849948740.064505
[2025-12-03 04:26:28] 2025-12-03 09:25:48,845 | INFO     | chi2: 2.4062565590194755
[2025-12-03 04:26:28] 2025-12-03 09:25:48,845 | INFO     | current chi2=2.4062565590194755 (change=5.766851902700933 %)
[2025-12-03 04:26:28] 2025-12-03 09:25:48,845 | INFO     | right removable region: 1069
[2025-12-03 04:26:28] 2025-12-03 09:25:48,846 | INFO     | sum of square deviations: 385206444672.25684
[2025-12-03 04:26:28] 2025-12-03 09:25:48,868 | INFO     | sum of deviations: 1917255178798.2366
[2025-12-03 04:26:28] 2025-12-03 09:25:48,869 | INFO     | mean x: 1764721145.6446512
[2025-12-03 04:26:28] 2025-12-03 09:25:48,869 | INFO     | mean y: 2871531.840930233
[2025-12-03 04:26:28] 2025-12-03 09:25:48,869 | INFO     | intersect: -8780524494.932875
[2025-12-03 04:26:28] 2025-12-03 09:25:48,870 | INFO     | chi2: 3.0660686475666687
[2025-12-03 04:26:28] 2025-12-03 09:25:48,870 | INFO     | current chi2=3.0660686475666687 (change=40.047313682144235 %)
[2025-12-03 04:26:28] 2025-12-03 09:25:48,871 | INFO     | sum of square deviations: 379856292630.54675
[2025-12-03 04:26:28] 2025-12-03 09:25:48,893 | INFO     | sum of deviations: 1822593115282.3013
[2025-12-03 04:26:28] 2025-12-03 09:25:48,893 | INFO     | mean x: 1764721298.1448598
[2025-12-03 04:26:28] 2025-12-03 09:25:48,893 | INFO     | mean y: 2874229.7271028035
[2025-12-03 04:26:28] 2025-12-03 09:25:48,894 | INFO     | intersect: -8464456576.134127
[2025-12-03 04:26:28] 2025-12-03 09:25:48,895 | INFO     | chi2: 2.954671383083668
[2025-12-03 04:26:28] 2025-12-03 09:25:48,895 | INFO     | current chi2=2.954671383083668 (change=3.6332279960988174 %)
[2025-12-03 04:26:28] 2025-12-03 09:25:48,895 | INFO     | left removable region: 20
[2025-12-03 04:26:28] 2025-12-03 09:25:48,896 | INFO     | sum of square deviations: 357927099728.9018
[2025-12-03 04:26:28] 2025-12-03 09:25:48,918 | INFO     | sum of deviations: 2038804810911.8984
[2025-12-03 04:26:28] 2025-12-03 09:25:48,918 | INFO     | mean x: 1764721267.6491897
[2025-12-03 04:26:28] 2025-12-03 09:25:48,918 | INFO     | mean y: 2888136.6491897046
[2025-12-03 04:26:28] 2025-12-03 09:25:48,918 | INFO     | intersect: -10049220835.05712
[2025-12-03 04:26:28] 2025-12-03 09:25:48,919 | INFO     | chi2: 0.16653670648015514
[2025-12-03 04:26:28] 2025-12-03 09:25:48,919 | INFO     | current memory leak: 5.70 B/s (using 1049 data points, chi2=0.17)
[2025-12-03 04:26:28] 2025-12-03 09:25:48,920 | INFO     | could have reported an average CPU frequency of 2538 MHz (40 samples)
[2025-12-03 04:26:28] 2025-12-03 09:25:48,920 | INFO     | ..............................
[2025-12-03 04:26:28] 2025-12-03 09:25:48,920 | INFO     | . Timing measurements:
[2025-12-03 04:26:28] 2025-12-03 09:25:48,920 | INFO     | . get job = 0 s
[2025-12-03 04:26:28] 2025-12-03 09:25:48,920 | INFO     | . initial setup = 2 s
[2025-12-03 04:26:28] 2025-12-03 09:25:48,921 | INFO     | . payload setup = 5 s
[2025-12-03 04:26:28] 2025-12-03 09:25:48,921 | INFO     | . stage-in = 0 s
[2025-12-03 04:26:28] 2025-12-03 09:25:48,921 | INFO     | . payload execution = 65850 s
[2025-12-03 04:26:28] 2025-12-03 09:25:48,921 | INFO     | . stage-out = 8 s
[2025-12-03 04:26:28] 2025-12-03 09:25:48,921 | INFO     | . log creation = 0 s
[2025-12-03 04:26:28] 2025-12-03 09:25:48,921 | INFO     | ..............................
[2025-12-03 04:26:28] 2025-12-03 09:25:49,001 | INFO     | 
[2025-12-03 04:26:28] 2025-12-03 09:25:49,002 | INFO     | job summary report
[2025-12-03 04:26:28] 2025-12-03 09:25:49,002 | INFO     | --------------------------------------------------
[2025-12-03 04:26:28] 2025-12-03 09:25:49,002 | INFO     | PanDA job id: 6895339733
[2025-12-03 04:26:28] 2025-12-03 09:25:49,002 | INFO     | task id: 47556137
[2025-12-03 04:26:28] 2025-12-03 09:25:49,002 | INFO     | errors: (none)
[2025-12-03 04:26:28] 2025-12-03 09:25:49,003 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 04:26:28] 2025-12-03 09:25:49,003 | INFO     | pilot state: finished 
[2025-12-03 04:26:28] 2025-12-03 09:25:49,003 | INFO     | transexitcode: 0
[2025-12-03 04:26:28] 2025-12-03 09:25:49,003 | INFO     | exeerrorcode: 0
[2025-12-03 04:26:28] 2025-12-03 09:25:49,003 | INFO     | exeerrordiag: 
[2025-12-03 04:26:28] 2025-12-03 09:25:49,003 | INFO     | exitcode: 0
[2025-12-03 04:26:28] 2025-12-03 09:25:49,004 | INFO     | exitmsg: OK
[2025-12-03 04:26:28] 2025-12-03 09:25:49,004 | INFO     | cpuconsumptiontime: 509146 s
[2025-12-03 04:26:28] 2025-12-03 09:25:49,004 | INFO     | nevents: 1000
[2025-12-03 04:26:28] 2025-12-03 09:25:49,004 | INFO     | neventsw: 0
[2025-12-03 04:26:28] 2025-12-03 09:25:49,004 | INFO     | pid: 28948
[2025-12-03 04:26:28] 2025-12-03 09:25:49,004 | INFO     | pgrp: 28948
[2025-12-03 04:26:28] 2025-12-03 09:25:49,005 | INFO     | corecount: 8
[2025-12-03 04:26:28] 2025-12-03 09:25:49,005 | INFO     | event service: False
[2025-12-03 04:26:28] 2025-12-03 09:25:49,005 | INFO     | sizes: {0: 2284042, 1: 2284241, 2: 2284241, 4: 2284531, 12: 2284559, 65859: 2339861, 65869: 2349101, 65870: 2349157, 65875: 2349181}
[2025-12-03 04:26:28] 2025-12-03 09:25:49,005 | INFO     | --------------------------------------------------
[2025-12-03 04:26:28] 2025-12-03 09:25:49,005 | INFO     | 
[2025-12-03 04:26:28] 2025-12-03 09:25:49,006 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-03 04:26:28] 2025-12-03 09:25:49,029 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,030 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,031 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,031 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,031 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,031 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,031 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,032 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,032 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,032 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,032 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 04:26:28] 2025-12-03 09:25:49,032 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,032 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 04:26:28] 2025-12-03 09:25:49,033 | INFO     | job 6895339733 has completed (purged errors)
[2025-12-03 04:26:28] 2025-12-03 09:25:49,033 | INFO     | overall cleanup function is called
[2025-12-03 04:26:28] 2025-12-03 09:25:50,048 | INFO     | --- collectZombieJob: --- 10, [28948]
[2025-12-03 04:26:28] 2025-12-03 09:25:50,048 | INFO     | zombie collector waiting for pid 28948
[2025-12-03 04:26:28] 2025-12-03 09:25:50,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 04:26:28] 2025-12-03 09:25:50,048 | INFO     | collected zombie processes
[2025-12-03 04:26:28] 2025-12-03 09:25:50,049 | INFO     | will attempt to kill all subprocesses of pid=28948
[2025-12-03 04:26:28] 2025-12-03 09:25:50,142 | INFO     | process IDs to be killed: [28948] (in reverse order)
[2025-12-03 04:26:28] 2025-12-03 09:25:50,193 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 04:26:28] 2025-12-03 09:25:50,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 04:26:28] 2025-12-03 09:25:50,196 | INFO     | did not find any defunct processes belonging to 28948
[2025-12-03 04:26:28] 2025-12-03 09:25:50,199 | INFO     | did not find any defunct processes belonging to 28948
[2025-12-03 04:26:28] 2025-12-03 09:25:50,201 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 04:26:28] 2025-12-03 09:25:50,201 | INFO     | ready for new job
[2025-12-03 04:26:28] 2025-12-03 09:25:50,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 04:26:28] 2025-12-03 09:25:50,205 | INFO     | ***************************************
[2025-12-03 04:26:28] 2025-12-03 09:25:50,205 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 04:26:28] 2025-12-03 09:25:50,206 | INFO     | ***************************************
[2025-12-03 04:26:28] 2025-12-03 09:25:50,206 | INFO     | 
[2025-12-03 04:26:28] 2025-12-03 09:25:50,207 | INFO     | architecture information:
[2025-12-03 04:26:28] 2025-12-03 09:25:50,207 | INFO     | executing command: cat /etc/os-release
[2025-12-03 04:26:28] 2025-12-03 09:25:50,223 | INFO     | cat /etc/os-release:
[2025-12-03 04:26:28] NAME="CentOS Linux"
[2025-12-03 04:26:28] VERSION="7 (Core)"
[2025-12-03 04:26:28] ID="centos"
[2025-12-03 04:26:28] ID_LIKE="rhel fedora"
[2025-12-03 04:26:28] VERSION_ID="7"
[2025-12-03 04:26:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 04:26:28] ANSI_COLOR="0;31"
[2025-12-03 04:26:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 04:26:28] HOME_URL="https://www.centos.org/"
[2025-12-03 04:26:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 04:26:28] 
[2025-12-03 04:26:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 04:26:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 04:26:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 04:26:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 04:26:28] 
[2025-12-03 04:26:28] 2025-12-03 09:25:50,224 | INFO     | ***************************************
[2025-12-03 04:26:28] 2025-12-03 09:25:50,727 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-03 04:26:28] 2025-12-03 09:25:50,744 | INFO     | sufficient remaining disk space (28180480000 B)
[2025-12-03 04:26:28] 2025-12-03 09:25:50,745 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 04:26:28] 2025-12-03 09:25:50,745 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 04:26:28] 2025-12-03 09:25:50,745 | INFO     | update_server=False
[2025-12-03 04:26:28] 2025-12-03 09:25:50,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 04:26:28] 2025-12-03 09:25:50,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 04:26:28] 2025-12-03 09:25:51,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 04:26:28] 2025-12-03 09:25:51,123 | INFO     | all data control threads have been joined
[2025-12-03 04:26:28] 2025-12-03 09:25:51,618 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 04:26:28] 2025-12-03 09:25:51,618 | INFO     | aborting loop
[2025-12-03 04:26:28] 2025-12-03 09:25:51,626 | INFO     | all job control threads have been joined
[2025-12-03 04:26:28] 2025-12-03 09:25:51,751 | INFO     | [job] retrieve thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:51,751 | INFO     | [job] queue monitor thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:51,930 | INFO     | all payload control threads have been joined
[2025-12-03 04:26:28] 2025-12-03 09:25:52,128 | INFO     | [data] control thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:52,310 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:52,454 | INFO     | [payload] failed_post thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:52,517 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:52,638 | INFO     | [job] job monitor thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:52,638 | INFO     | [job] control thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:52,935 | INFO     | [payload] control thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:52,950 | INFO     | [payload] validate_post thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:52,964 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:53,020 | INFO     | [job] validate thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:53,110 | INFO     | [data] copytool_out thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:53,133 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:53,149 | INFO     | [data] copytool_in thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:25:54,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 04:26:28] 2025-12-03 09:25:58,017 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 04:26:28] 2025-12-03 09:26:20,884 | INFO     | PID=22427 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-03 04:26:28] 2025-12-03 09:26:20,884 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 04:26:28] 2025-12-03 09:26:20,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 04:26:28] 2025-12-03 09:26:20,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 04:26:28] 2025-12-03 09:26:23,151 | INFO     | [monitor] cgroup control has ended
[2025-12-03 04:26:28] 2025-12-03 09:26:23,252 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140189618153280)>', '<ExcThread(monitor, started 140188730779392)>']
[2025-12-03 04:26:28] 2025-12-03 09:26:23,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 04:26:28] 2025-12-03 09:26:23,900 | INFO     | [monitor] control thread has ended
[2025-12-03 04:26:28] 2025-12-03 09:26:28,278 | INFO     | all workflow threads have been joined
[2025-12-03 04:26:28] 2025-12-03 09:26:28,278 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 04:26:28] 2025-12-03 09:26:28,278 | INFO     | traces error code: 0
[2025-12-03 04:26:28] 2025-12-03 09:26:28,279 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 04:26:28] 2025-12-03 09:26:28,374 [wrapper] ==== pilot stdout END ====
[2025-12-03 04:26:28] 2025-12-03 09:26:28,377 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 04:26:28] 2025-12-03 09:26:28,381 [wrapper] pilotpid: 22427
[2025-12-03 04:26:28] 2025-12-03 09:26:28,385 [wrapper] Pilot exit status: 0
[2025-12-03 04:26:28] 2025-12-03 09:26:28,399 [wrapper] pandaids: 6895339733
[2025-12-03 04:26:28] 2025-12-03 09:26:28,449 [wrapper] cleanup supervisor_pilot  5894 22428
[2025-12-03 04:26:28] 2025-12-03 09:26:28,453 [wrapper] Test setup, not cleaning
[2025-12-03 04:26:28] 2025-12-03 09:26:28,457 [wrapper] apfmon messages muted
[2025-12-03 04:26:28] 2025-12-03 09:26:28,461 [wrapper] ==== wrapper stdout END ====
[2025-12-03 04:26:28] 2025-12-03 09:26:28,465 [wrapper] ==== wrapper stderr END ====
[2025-12-03 04:26:28]  *** Error codes and diagnostics ***
[2025-12-03 04:26:28]     "exeErrorCode": 0,
[2025-12-03 04:26:28]     "exeErrorDiag": "",
[2025-12-03 04:26:28]     "pilotErrorCode": 0,
[2025-12-03 04:26:28]     "pilotErrorDiag": "",
[2025-12-03 04:26:28]  *** Listing of results directory ***
[2025-12-03 04:26:28] total 1334348
[2025-12-03 04:26:28] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 06:19 pilot3.tar.gz
[2025-12-03 04:26:28] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 06:32 queuedata.json
[2025-12-03 04:26:28] -rwx------ 1 boincer umatlas     36292 Nov 22 06:33 runpilot2-wrapper.sh
[2025-12-03 04:26:28] -rw-r--r-- 1 boincer umatlas       100 Dec  2 10:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 04:26:28] -rwxr-xr-x 1 boincer umatlas      7986 Dec  2 10:07 run_atlas
[2025-12-03 04:26:28] -rw-r--r-- 1 boincer umatlas       105 Dec  2 10:07 job.xml
[2025-12-03 04:26:28] -rw-r--r-- 2 boincer umatlas 409594164 Dec  2 10:07 EVNT.47483658._000360.pool.root.1
[2025-12-03 04:26:28] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 10:07 start_atlas.sh
[2025-12-03 04:26:28] drwxrwx--x 2 boincer umatlas      4096 Dec  2 10:07 shared
[2025-12-03 04:26:28] -rw-r--r-- 2 boincer umatlas    590098 Dec  2 10:07 input.tar.gz
[2025-12-03 04:26:28] -rw-r--r-- 1 boincer umatlas         0 Dec  2 10:07 boinc_lockfile
[2025-12-03 04:26:28] -rw-r--r-- 1 boincer umatlas      2784 Dec  2 10:07 pandaJob.out
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas        57 Dec  2 10:07 setup.sh.local
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas    987484 Dec  2 10:07 agis_schedconf.cvmfs.json
[2025-12-03 04:26:28] drwx------ 5 boincer umatlas      4096 Dec  2 10:07 pilot3
[2025-12-03 04:26:28] -rw-r--r-- 1 boincer umatlas       533 Dec  3 04:16 boinc_task_state.xml
[2025-12-03 04:26:28] -rw-r--r-- 1 boincer umatlas      5954 Dec  3 04:22 init_data.xml
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas 929981291 Dec  3 04:25 HITS.47556137._003562.pool.root.1
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas      1067 Dec  3 04:25 memory_monitor_summary.json
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas   1516240 Dec  3 04:25 agis_ddmendpoints.agis.ALL.json
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas   2262971 Dec  3 04:25 log.47556137._003562.job.log.tgz.1
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas      8668 Dec  3 04:25 heartbeat.json
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas        95 Dec  3 04:26 pilot_heartbeat.json
[2025-12-03 04:26:28] -rw-r--r-- 1 boincer umatlas      8192 Dec  3 04:26 boinc_mmap_file
[2025-12-03 04:26:28] -rw-r--r-- 1 boincer umatlas        29 Dec  3 04:26 wrapper_checkpoint.txt
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas      4746 Dec  3 04:26 pilotlog.txt
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas   9175309 Dec  3 04:26 log.47556137._003562.job.log.1
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas       353 Dec  3 04:26 output.list
[2025-12-03 04:26:28] -rw-r--r-- 1 boincer umatlas       620 Dec  3 04:26 runtime_log
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas  11458560 Dec  3 04:26 result.tar.gz
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas       668 Dec  3 04:26 9jSNDmh20g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmn5HKDm1XTQQm.diag
[2025-12-03 04:26:28] -rw-r--r-- 1 boincer umatlas      9343 Dec  3 04:26 runtime_log.err
[2025-12-03 04:26:28] -rw-r--r-- 1 boincer umatlas     21451 Dec  3 04:26 stderr.txt
[2025-12-03 04:26:28] HITS file was successfully produced:
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas 929981291 Dec  3 04:25 shared/HITS.pool.root.1
[2025-12-03 04:26:28]  *** Contents of shared directory: ***
[2025-12-03 04:26:28] total 1319976
[2025-12-03 04:26:28] -rw-r--r-- 2 boincer umatlas 409594164 Dec  2 10:07 ATLAS.root_0
[2025-12-03 04:26:28] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 10:07 start_atlas.sh
[2025-12-03 04:26:28] -rw-r--r-- 2 boincer umatlas    590098 Dec  2 10:07 input.tar.gz
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas 929981291 Dec  3 04:25 HITS.pool.root.1
[2025-12-03 04:26:28] -rw------- 1 boincer umatlas  11458560 Dec  3 04:26 result.tar.gz
04:26:29 (18709): run_atlas exited; CPU time 506953.356969
04:26:29 (18709): called boinc_finish(0)

</stderr_txt>
]]>

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