Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:05:45 (442244): wrapper (7.7.26015): starting
04:05:45 (442244): wrapper: running run_atlas (--nthreads 4)
[2025-12-05 04:05:45] Arguments: --nthreads 4
[2025-12-05 04:05:45] Threads: 4
[2025-12-05 04:05:45] Checking for CVMFS
[2025-12-05 04:05:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-05 04:05:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-05 04:05:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-05 04:05:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-05 04:05:45] 2.9.2.0 3041 2924 83268 153639 1 110 31836579 36864000 0 130560 0 1223533 99.987 79427 841 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-05 04:05:45] CVMFS is ok
[2025-12-05 04:05:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-05 04:05:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-05 04:05:45] Further information can be found at the LHC@home message board.
[2025-12-05 04:05:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-05 04:05:45] Checking for apptainer binary...
[2025-12-05 04:05:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-05 04:05:45] Running /usr/bin/apptainer --version
[2025-12-05 04:05:45] apptainer version 1.4.1-1.1
[2025-12-05 04:05:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-05 04:05:45] cosA131b
[2025-12-05 04:05:45] apptainer works
[2025-12-05 04:05:45] Set ATHENA_PROC_NUMBER=4
[2025-12-05 04:05:45] Set ATHENA_CORE_NUMBER=4
[2025-12-05 04:05:45] Starting ATLAS job with PandaID=6895350374
[2025-12-05 04:05:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-05 10:53:31]  *** The last 200 lines of the pilot log: ***
[2025-12-05 10:53:31] 2025-12-05 09:52:33,375 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-05 10:53:31] 2025-12-05 09:52:33,376 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3333.980625000001
[2025-12-05 10:53:31] 2025-12-05 09:52:33,378 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6895350374/memory_monitor_summary.json (trf name=prmon)
[2025-12-05 10:53:31] 2025-12-05 09:52:33,378 | INFO     | extracted standard info from prmon json
[2025-12-05 10:53:31] 2025-12-05 09:52:33,378 | INFO     | extracted standard memory fields from prmon json
[2025-12-05 10:53:31] 2025-12-05 09:52:33,378 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-05 10:53:31] 2025-12-05 09:52:33,381 | INFO     | fitting pss+swap vs Time
[2025-12-05 10:53:31] 2025-12-05 09:52:33,381 | INFO     | sum of square deviations: 19845209300.0
[2025-12-05 10:53:31] 2025-12-05 09:52:33,382 | INFO     | sum of deviations: 151847630833.49994
[2025-12-05 10:53:31] 2025-12-05 09:52:33,382 | INFO     | mean x: 1764916146.5
[2025-12-05 10:53:31] 2025-12-05 09:52:33,382 | INFO     | mean y: 2428505.7775
[2025-12-05 10:53:31] 2025-12-05 09:52:33,382 | INFO     | intersect: -13502006313.45191
[2025-12-05 10:53:31] 2025-12-05 09:52:33,383 | INFO     | chi2: 4.492930396032531
[2025-12-05 10:53:31] 2025-12-05 09:52:33,383 | INFO     | sum of square deviations: 19110274590.0
[2025-12-05 10:53:31] 2025-12-05 09:52:33,384 | INFO     | sum of deviations: 214354532407.99994
[2025-12-05 10:53:31] 2025-12-05 09:52:33,384 | INFO     | mean x: 1764915994.0
[2025-12-05 10:53:31] 2025-12-05 09:52:33,384 | INFO     | mean y: 2441420.8025316456
[2025-12-05 10:53:31] 2025-12-05 09:52:33,384 | INFO     | intersect: -19794120938.967854
[2025-12-05 10:53:31] 2025-12-05 09:52:33,385 | INFO     | chi2: 3.1019421797313087
[2025-12-05 10:53:31] 2025-12-05 09:52:33,385 | INFO     | current chi2=3.1019421797313087 (change=30.95948732100391 %)
[2025-12-05 10:53:31] 2025-12-05 09:52:33,385 | INFO     | sum of square deviations: 18393712317.5
[2025-12-05 10:53:31] 2025-12-05 09:52:33,386 | INFO     | sum of deviations: 212937196005.00003
[2025-12-05 10:53:31] 2025-12-05 09:52:33,386 | INFO     | mean x: 1764915841.5
[2025-12-05 10:53:31] 2025-12-05 09:52:33,386 | INFO     | mean y: 2441119.523076923
[2025-12-05 10:53:31] 2025-12-05 09:52:33,386 | INFO     | intersect: -20429336000.1103
[2025-12-05 10:53:31] 2025-12-05 09:52:33,387 | INFO     | chi2: 3.0963134548441893
[2025-12-05 10:53:31] 2025-12-05 09:52:33,387 | INFO     | current chi2=3.0963134548441893 (change=0.18145808532146687 %)
[2025-12-05 10:53:31] 2025-12-05 09:52:33,387 | INFO     | right removable region: 389
[2025-12-05 10:53:31] 2025-12-05 09:52:33,387 | INFO     | sum of square deviations: 19110274590.0
[2025-12-05 10:53:31] 2025-12-05 09:52:33,388 | INFO     | sum of deviations: 52944557160.0
[2025-12-05 10:53:31] 2025-12-05 09:52:33,388 | INFO     | mean x: 1764916299.0
[2025-12-05 10:53:31] 2025-12-05 09:52:33,388 | INFO     | mean y: 2448999.1848101267
[2025-12-05 10:53:31] 2025-12-05 09:52:33,388 | INFO     | intersect: -4887209254.282555
[2025-12-05 10:53:31] 2025-12-05 09:52:33,388 | INFO     | chi2: 2.1127290582710097
[2025-12-05 10:53:31] 2025-12-05 09:52:33,389 | INFO     | current chi2=2.1127290582710097 (change=52.976590509021705 %)
[2025-12-05 10:53:31] 2025-12-05 09:52:33,389 | INFO     | sum of square deviations: 18393712317.5
[2025-12-05 10:53:31] 2025-12-05 09:52:33,390 | INFO     | sum of deviations: 14140557742.000011
[2025-12-05 10:53:31] 2025-12-05 09:52:33,390 | INFO     | mean x: 1764916451.5
[2025-12-05 10:53:31] 2025-12-05 09:52:33,390 | INFO     | mean y: 2457219.358974359
[2025-12-05 10:53:31] 2025-12-05 09:52:33,390 | INFO     | intersect: -1354359858.2081904
[2025-12-05 10:53:31] 2025-12-05 09:52:33,390 | INFO     | chi2: 1.6186319714626487
[2025-12-05 10:53:31] 2025-12-05 09:52:33,390 | INFO     | current chi2=1.6186319714626487 (change=23.38667539380153 %)
[2025-12-05 10:53:31] 2025-12-05 09:52:33,390 | INFO     | left removable region: 20
[2025-12-05 10:53:31] 2025-12-05 09:52:33,391 | INFO     | sum of square deviations: 15579529320.0
[2025-12-05 10:53:31] 2025-12-05 09:52:33,392 | INFO     | sum of deviations: 52989981786.00001
[2025-12-05 10:53:31] 2025-12-05 09:52:33,392 | INFO     | mean x: 1764916421.0
[2025-12-05 10:53:31] 2025-12-05 09:52:33,392 | INFO     | mean y: 2476639.601626016
[2025-12-05 10:53:31] 2025-12-05 09:52:33,392 | INFO     | intersect: -6000457536.499807
[2025-12-05 10:53:31] 2025-12-05 09:52:33,392 | INFO     | chi2: 0.16801371524353462
[2025-12-05 10:53:31] 2025-12-05 09:52:33,392 | INFO     | current memory leak: 3.40 B/s (using 369 data points, chi2=0.17)
[2025-12-05 10:53:31] 2025-12-05 09:52:33,392 | INFO     | could have reported an average CPU frequency of 3828 MHz (17 samples)
[2025-12-05 10:53:31] 2025-12-05 09:52:33,393 | INFO     | ..............................
[2025-12-05 10:53:31] 2025-12-05 09:52:33,393 | INFO     | . Timing measurements:
[2025-12-05 10:53:31] 2025-12-05 09:52:33,393 | INFO     | . get job = 0 s
[2025-12-05 10:53:31] 2025-12-05 09:52:33,393 | INFO     | . initial setup = 1 s
[2025-12-05 10:53:31] 2025-12-05 09:52:33,393 | INFO     | . payload setup = 4 s
[2025-12-05 10:53:31] 2025-12-05 09:52:33,393 | INFO     | . stage-in = 0 s
[2025-12-05 10:53:31] 2025-12-05 09:52:33,393 | INFO     | . payload execution = 24371 s
[2025-12-05 10:53:31] 2025-12-05 09:52:33,393 | INFO     | . stage-out = 1 s
[2025-12-05 10:53:31] 2025-12-05 09:52:33,393 | INFO     | . log creation = 0 s
[2025-12-05 10:53:31] 2025-12-05 09:52:33,393 | INFO     | ..............................
[2025-12-05 10:53:31] 2025-12-05 09:52:33,411 | INFO     | time since job start (24400s) is within the limit (172800.0s)
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | 
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | job summary report
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | --------------------------------------------------
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | PanDA job id: 6895350374
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | task id: 47556137
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | errors: (none)
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | pilot state: finished 
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | transexitcode: 0
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | exeerrorcode: 0
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | exeerrordiag: 
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | exitcode: 0
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | exitmsg: OK
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | cpuconsumptiontime: 95484 s
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | nevents: 1000
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | neventsw: 0
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | pid: 452632
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | pgrp: 452632
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | corecount: 4
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | event service: False
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | sizes: {0: 2284261, 3: 2284523, 10: 2284551, 24379: 2321359, 24380: 2321358, 24381: 2330598, 24385: 2330852}
[2025-12-05 10:53:31] 2025-12-05 09:52:33,433 | INFO     | --------------------------------------------------
[2025-12-05 10:53:31] 2025-12-05 09:52:33,434 | INFO     | 
[2025-12-05 10:53:31] 2025-12-05 09:52:33,434 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-05 10:53:31] 2025-12-05 09:52:33,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | job 6895350374 has completed (purged errors)
[2025-12-05 10:53:31] 2025-12-05 09:52:33,452 | INFO     | overall cleanup function is called
[2025-12-05 10:53:31] 2025-12-05 09:52:34,462 | INFO     | --- collectZombieJob: --- 10, [452632]
[2025-12-05 10:53:31] 2025-12-05 09:52:34,462 | INFO     | zombie collector waiting for pid 452632
[2025-12-05 10:53:31] 2025-12-05 09:52:34,463 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-05 10:53:31] 2025-12-05 09:52:34,463 | INFO     | collected zombie processes
[2025-12-05 10:53:31] 2025-12-05 09:52:34,463 | INFO     | will attempt to kill all subprocesses of pid=452632
[2025-12-05 10:53:31] 2025-12-05 09:52:34,507 | INFO     | process IDs to be killed: [452632] (in reverse order)
[2025-12-05 10:53:31] 2025-12-05 09:52:34,541 | WARNING  | found no corresponding commands to process id(s)
[2025-12-05 10:53:31] 2025-12-05 09:52:34,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-05 10:53:31] 2025-12-05 09:52:34,543 | INFO     | did not find any defunct processes belonging to 452632
[2025-12-05 10:53:31] 2025-12-05 09:52:34,544 | INFO     | did not find any defunct processes belonging to 452632
[2025-12-05 10:53:31] 2025-12-05 09:52:34,545 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-05 10:53:31] 2025-12-05 09:52:34,545 | INFO     | ready for new job
[2025-12-05 10:53:31] 2025-12-05 09:52:34,545 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-05 10:53:31] 2025-12-05 09:52:34,546 | INFO     | ***************************************
[2025-12-05 10:53:31] 2025-12-05 09:52:34,546 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-05 10:53:31] 2025-12-05 09:52:34,546 | INFO     | ***************************************
[2025-12-05 10:53:31] 2025-12-05 09:52:34,546 | INFO     | 
[2025-12-05 10:53:31] 2025-12-05 09:52:34,547 | INFO     | architecture information:
[2025-12-05 10:53:31] 2025-12-05 09:52:34,547 | INFO     | executing command: cat /etc/os-release
[2025-12-05 10:53:31] 2025-12-05 09:52:34,561 | INFO     | cat /etc/os-release:
[2025-12-05 10:53:31] NAME="CentOS Linux"
[2025-12-05 10:53:31] VERSION="7 (Core)"
[2025-12-05 10:53:31] ID="centos"
[2025-12-05 10:53:31] ID_LIKE="rhel fedora"
[2025-12-05 10:53:31] VERSION_ID="7"
[2025-12-05 10:53:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-05 10:53:31] ANSI_COLOR="0;31"
[2025-12-05 10:53:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-05 10:53:31] HOME_URL="https://www.centos.org/"
[2025-12-05 10:53:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-05 10:53:31] 
[2025-12-05 10:53:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-05 10:53:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-05 10:53:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-05 10:53:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-05 10:53:31] 
[2025-12-05 10:53:31] 2025-12-05 09:52:34,562 | INFO     | ***************************************
[2025-12-05 10:53:31] 2025-12-05 09:52:35,065 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-05 10:53:31] 2025-12-05 09:52:35,084 | INFO     | sufficient remaining disk space (323094577152 B)
[2025-12-05 10:53:31] 2025-12-05 09:52:35,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-05 10:53:31] 2025-12-05 09:52:35,084 | INFO     | current server update state: UPDATING_FINAL
[2025-12-05 10:53:31] 2025-12-05 09:52:35,084 | INFO     | update_server=False
[2025-12-05 10:53:31] 2025-12-05 09:52:35,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-05 10:53:31] 2025-12-05 09:52:35,084 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-05 10:53:31] 2025-12-05 09:52:35,084 | INFO     | found 0 job(s) in 20 queues
[2025-12-05 10:53:31] 2025-12-05 09:52:35,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-05 10:53:31] 2025-12-05 09:52:35,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-05 10:53:31] 2025-12-05 09:52:35,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-05 10:53:31] 2025-12-05 09:52:35,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-05 10:53:31] 2025-12-05 09:52:35,103 | INFO     | all data control threads have been joined
[2025-12-05 10:53:31] 2025-12-05 09:52:35,173 | INFO     | all payload control threads have been joined
[2025-12-05 10:53:31] 2025-12-05 09:52:35,261 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-05 10:53:31] 2025-12-05 09:52:35,365 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-05 10:53:31] 2025-12-05 09:52:35,365 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-05 10:53:31] 2025-12-05 09:52:35,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-05 10:53:31] 2025-12-05 09:52:35,365 | INFO     | will abort loop
[2025-12-05 10:53:31] 2025-12-05 09:52:35,726 | INFO     | all job control threads have been joined
[2025-12-05 10:53:31] 2025-12-05 09:52:36,090 | INFO     | [job] retrieve thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:36,090 | INFO     | [job] queue monitor thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:36,108 | INFO     | [data] control thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:36,179 | INFO     | [payload] control thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:36,371 | INFO     | [job] job monitor thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:36,578 | INFO     | [payload] validate_post thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:36,646 | INFO     | [data] copytool_in thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:36,732 | INFO     | [job] control thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:37,091 | INFO     | [data] copytool_out thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:37,225 | INFO     | [payload] execute_payloads thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:37,250 | INFO     | [job] create_data_payload thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:37,301 | INFO     | [payload] validate_pre thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:37,343 | INFO     | [job] validate thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:37,359 | INFO     | [payload] failed_post thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:39,268 | INFO     | [data] queue_monitor thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:52:45,163 | INFO     | job.realtimelogging is not enabled
[2025-12-05 10:53:31] 2025-12-05 09:52:46,169 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-05 10:53:31] 2025-12-05 09:53:24,486 | INFO     | [monitor] cgroup control has ended
[2025-12-05 10:53:31] 2025-12-05 09:53:26,152 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140627379824448)>', '<ExcThread(monitor, started 140626079246080)>']
[2025-12-05 10:53:31] 2025-12-05 09:53:26,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-05 10:53:31] 2025-12-05 09:53:26,359 | INFO     | [monitor] control thread has ended
[2025-12-05 10:53:31] 2025-12-05 09:53:31,178 | INFO     | all workflow threads have been joined
[2025-12-05 10:53:31] 2025-12-05 09:53:31,178 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-05 10:53:31] 2025-12-05 09:53:31,178 | INFO     | traces error code: 0
[2025-12-05 10:53:31] 2025-12-05 09:53:31,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-05 10:53:31] 2025-12-05 09:53:31,260 [wrapper] ==== pilot stdout END ====
[2025-12-05 10:53:31] 2025-12-05 09:53:31,265 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-05 10:53:31] 2025-12-05 09:53:31,269 [wrapper] pilotpid: 446045
[2025-12-05 10:53:31] 2025-12-05 09:53:31,273 [wrapper] Pilot exit status: 0
[2025-12-05 10:53:31] 2025-12-05 09:53:31,284 [wrapper] pandaids: 6895350374
[2025-12-05 10:53:31] 2025-12-05 09:53:31,309 [wrapper] cleanup supervisor_pilot  498137 446046
[2025-12-05 10:53:31] 2025-12-05 09:53:31,313 [wrapper] Test setup, not cleaning
[2025-12-05 10:53:31] 2025-12-05 09:53:31,317 [wrapper] apfmon messages muted
[2025-12-05 10:53:31] 2025-12-05 09:53:31,321 [wrapper] ==== wrapper stdout END ====
[2025-12-05 10:53:31] 2025-12-05 09:53:31,325 [wrapper] ==== wrapper stderr END ====
[2025-12-05 10:53:31]  *** Error codes and diagnostics ***
[2025-12-05 10:53:31]     "exeErrorCode": 0,
[2025-12-05 10:53:31]     "exeErrorDiag": "",
[2025-12-05 10:53:31]     "pilotErrorCode": 0,
[2025-12-05 10:53:31]     "pilotErrorDiag": "",
[2025-12-05 10:53:31]  *** Listing of results directory ***
[2025-12-05 10:53:31] total 1307284
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc    576529 Nov 22 21:41 pilot3.tar.gz
[2025-12-05 10:53:31] -rwx------ 1 boinc boinc     36292 Nov 22 22:05 runpilot2-wrapper.sh
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc      5112 Nov 22 22:05 queuedata.json
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc       100 Dec  5 04:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-05 10:53:31] -rwxr-xr-x 1 boinc boinc      7986 Dec  5 04:05 run_atlas
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc       105 Dec  5 04:05 job.xml
[2025-12-05 10:53:31] -rw-r--r-- 2 boinc boinc 411091773 Dec  5 04:05 EVNT.47483658._000509.pool.root.1
[2025-12-05 10:53:31] drwxrwx--x 2 boinc boinc      4096 Dec  5 04:05 shared
[2025-12-05 10:53:31] -rw-r--r-- 2 boinc boinc    590100 Dec  5 04:05 input.tar.gz
[2025-12-05 10:53:31] -rw-r--r-- 2 boinc boinc     15847 Dec  5 04:05 start_atlas.sh
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc         0 Dec  5 04:05 boinc_setup_complete
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc      6380 Dec  5 04:05 init_data.xml
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc         0 Dec  5 04:05 boinc_lockfile
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc      2782 Dec  5 04:05 pandaJob.out
[2025-12-05 10:53:31] -rw------- 1 boinc boinc    985572 Dec  5 04:05 agis_schedconf.cvmfs.json
[2025-12-05 10:53:31] drwx------ 5 boinc boinc      4096 Dec  5 04:05 pilot3
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc       531 Dec  5 10:47 boinc_task_state.xml
[2025-12-05 10:53:31] -rw------- 1 boinc boinc        95 Dec  5 10:52 pilot_heartbeat.json
[2025-12-05 10:53:31] -rw------- 1 boinc boinc 914275614 Dec  5 10:52 HITS.47556137._005041.pool.root.1
[2025-12-05 10:53:31] -rw------- 1 boinc boinc      1028 Dec  5 10:52 memory_monitor_summary.json
[2025-12-05 10:53:31] -rw------- 1 boinc boinc   1516240 Dec  5 10:52 agis_ddmendpoints.agis.ALL.json
[2025-12-05 10:53:31] -rw------- 1 boinc boinc   1246602 Dec  5 10:52 log.47556137._005041.job.log.tgz.1
[2025-12-05 10:53:31] -rw------- 1 boinc boinc      8569 Dec  5 10:52 heartbeat.json
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc      8192 Dec  5 10:53 boinc_mmap_file
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc        28 Dec  5 10:53 wrapper_checkpoint.txt
[2025-12-05 10:53:31] -rw------- 1 boinc boinc      4814 Dec  5 10:53 pilotlog.txt
[2025-12-05 10:53:31] -rw------- 1 boinc boinc   3442648 Dec  5 10:53 log.47556137._005041.job.log.1
[2025-12-05 10:53:31] -rw------- 1 boinc boinc       353 Dec  5 10:53 output.list
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc       620 Dec  5 10:53 runtime_log
[2025-12-05 10:53:31] -rw------- 1 boinc boinc   4710400 Dec  5 10:53 result.tar.gz
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc      8908 Dec  5 10:53 runtime_log.err
[2025-12-05 10:53:31] -rw------- 1 boinc boinc       667 Dec  5 10:53 FpgKDmwy9g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHIIKDmE14JZn.diag
[2025-12-05 10:53:31] -rw-r--r-- 1 boinc boinc     21114 Dec  5 10:53 stderr.txt
[2025-12-05 10:53:31] HITS file was successfully produced:
[2025-12-05 10:53:31] -rw------- 1 boinc boinc 914275614 Dec  5 10:52 shared/HITS.pool.root.1
[2025-12-05 10:53:31]  *** Contents of shared directory: ***
[2025-12-05 10:53:31] total 1299512
[2025-12-05 10:53:31] -rw-r--r-- 2 boinc boinc 411091773 Dec  5 04:05 ATLAS.root_0
[2025-12-05 10:53:31] -rw-r--r-- 2 boinc boinc    590100 Dec  5 04:05 input.tar.gz
[2025-12-05 10:53:31] -rw-r--r-- 2 boinc boinc     15847 Dec  5 04:05 start_atlas.sh
[2025-12-05 10:53:31] -rw------- 1 boinc boinc 914275614 Dec  5 10:52 HITS.pool.root.1
[2025-12-05 10:53:31] -rw------- 1 boinc boinc   4710400 Dec  5 10:53 result.tar.gz
10:53:33 (442244): run_atlas exited; CPU time 95454.783851
10:53:33 (442244): called boinc_finish(0)

</stderr_txt>
]]>

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