Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-02 16:12:58 (34920): vboxwrapper version 26210
2025-12-02 16:12:58 (34920): BOINC client version: 8.0.2
2025-12-02 16:12:58 (34920): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-12-02 16:12:59 (34920): Successfully copied 'init_data.xml' to the shared directory.
2025-12-02 16:12:59 (34920): Create VM. (boinc_167a78bc1d61b52d, slot#1)
2025-12-02 16:13:00 (34920): Setting Memory Size for VM. (6200MB)
2025-12-02 16:13:00 (34920): Setting CPU Count for VM. (4)
2025-12-02 16:13:00 (34920): Setting Chipset Options for VM.
2025-12-02 16:13:00 (34920): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-02 16:13:01 (34920): Setting Boot Options for VM.
2025-12-02 16:13:01 (34920): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-02 16:13:01 (34920): Enabling VM Network Access.
2025-12-02 16:13:02 (34920): Disabling USB Support for VM.
2025-12-02 16:13:02 (34920): Disabling COM Port Support for VM.
2025-12-02 16:13:02 (34920): Disabling LPT Port Support for VM.
2025-12-02 16:13:02 (34920): Disabling Audio Support for VM.
2025-12-02 16:13:03 (34920): Disabling Clipboard Support for VM.
2025-12-02 16:13:03 (34920): Disabling Drag and Drop Support for VM.
2025-12-02 16:13:03 (34920): Adding storage controller(s) to VM.
2025-12-02 16:13:03 (34920): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-02 16:13:04 (34920): Adding VirtualBox Guest Additions to VM.
2025-12-02 16:13:04 (34920): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-02 16:13:04 (34920): forwarding host port 55162 to guest port 80
2025-12-02 16:13:05 (34920): Enabling remote desktop for VM.
2025-12-02 16:13:05 (34920): Enabling shared directory for VM.
2025-12-02 16:13:06 (34920): Starting VM using VBoxManage interface. (boinc_167a78bc1d61b52d, slot#1)
2025-12-02 16:13:11 (34920): Successfully started VM. (PID = '24680')
2025-12-02 16:13:11 (34920): Reporting VM Process ID to BOINC.
2025-12-02 16:13:11 (34920): Guest Log: BIOS: VirtualBox 7.0.12
2025-12-02 16:13:11 (34920): Guest Log: CPUID EDX: 0x178bfbff
2025-12-02 16:13:11 (34920): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-02 16:13:11 (34920): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-02 16:13:11 (34920): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-02 16:13:11 (34920): Detected: Web Application Enabled (http://localhost:55162)
2025-12-02 16:13:11 (34920): Detected: Remote Desktop Enabled (localhost:55164)
2025-12-02 16:13:11 (34920): Preference change detected
2025-12-02 16:13:11 (34920): Setting CPU throttle for VM. (100%)
2025-12-02 16:13:11 (34920): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-02 16:13:13 (34920): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-02 16:13:13 (34920): Guest Log: BIOS: Booting from Hard Disk...
2025-12-02 16:13:15 (34920): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-02 16:13:15 (34920): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-02 16:13:15 (34920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-02 16:13:21 (34920): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-02 16:13:21 (34920): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-02 16:13:25 (34920): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-02 16:13:25 (34920): Guest Log: 00:00:00.000094 main     Log opened 2025-12-02T16:13:23.293661000Z
2025-12-02 16:13:25 (34920): Guest Log: 00:00:00.000160 main     OS Product: Linux
2025-12-02 16:13:25 (34920): Guest Log: 00:00:00.000202 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-02 16:13:25 (34920): Guest Log: 00:00:00.000223 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-02 16:13:25 (34920): Guest Log: 00:00:00.000241 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-02 16:13:25 (34920): Guest Log: 00:00:00.000241 main     Process ID: 1358
2025-12-02 16:13:25 (34920): Guest Log: 00:00:00.000241 main     Package type: LINUX_64BITS_GENERIC
2025-12-02 16:13:25 (34920): Guest Log: 00:00:00.000809 main     5.2.32 r132073 started. Verbose level = 0
2025-12-02 16:13:25 (34920): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-02 16:13:25 (34920): Guest Log: [INFO] Mounting shared directory
2025-12-02 16:13:25 (34920): Guest Log: [INFO] Checking for init_data.xml
2025-12-02 16:13:29 (34920): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-02 16:13:29 (34920): Guest Log: [INFO] Detected branch: prod
2025-12-02 16:13:29 (34920): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-02 16:13:29 (34920): Guest Log: Copying input files
2025-12-02 16:13:30 (34920): Guest Log: Copied input files into RunAtlas.
2025-12-02 16:13:30 (34920): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-12-02 16:13:35 (34920): Guest Log: 00:00:10.023366 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 312 549 000ns (GuestNow=1 764 688 414 982 679 000 ns GuestLast=1 764 692 003 295 228 000 ns fSetTimeLastLoop=true )
2025-12-02 16:13:37 (34920): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-02 16:13:38 (34920): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-02 16:13:38 (34920): Guest Log: 2.6.3.0 1633 0 29576 153560 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-12-02 16:13:38 (34920): Guest Log: copied the webapp to /var/www
2025-12-02 16:13:38 (34920): Guest Log: ATHENA_PROC_NUMBER=4
2025-12-02 16:13:38 (34920): Guest Log: ATHENA_CORE_NUMBER=4
2025-12-02 16:13:38 (34920): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-02 16:13:38 (34920): Guest Log:  *** Starting ATLAS job. (PandaID=6895329712 taskID=47556137) ***
2025-12-02 17:53:15 (34920): Status Report: Elapsed Time: '6000.000000'
2025-12-02 17:53:15 (34920): Status Report: CPU Time: '22708.953125'
2025-12-02 19:33:20 (34920): Status Report: Elapsed Time: '12000.000000'
2025-12-02 19:33:20 (34920): Status Report: CPU Time: '46629.203125'
2025-12-02 21:13:24 (34920): Status Report: Elapsed Time: '18000.000000'
2025-12-02 21:13:24 (34920): Status Report: CPU Time: '70561.390625'
2025-12-02 22:53:29 (34920): Status Report: Elapsed Time: '24000.000000'
2025-12-02 22:53:29 (34920): Status Report: CPU Time: '94491.218750'
2025-12-02 23:14:42 (34920): Guest Log:  *** Job finished ***
2025-12-02 23:14:42 (34920): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:12,085 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:12,085 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:32,799 | INFO     | [monitor] cgroup control has ended
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:34,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139672851900224)>', '<ExcThread(monitor, started 139672151889664)>']
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:34,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:34,258 | INFO     | [monitor] control thread has ended
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,152 | INFO     | all workflow threads have been joined
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,152 | INFO     | end of generic workflow (traces error code: 0)
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,152 | INFO     | traces error code: 0
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,196 [wrapper] ==== pilot stdout END ====
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,199 [wrapper] ==== wrapper stdout RESUME ====
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,202 [wrapper] pilotpid: 6018
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,205 [wrapper] Pilot exit status: 0
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,215 [wrapper] pandaids: 6895329712
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,232 [wrapper] cleanup supervisor_pilot   416 6019
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,236 [wrapper] Test setup, not cleaning
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,238 [wrapper] apfmon messages muted
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,240 [wrapper] ==== wrapper stdout END ====
2025-12-02 23:14:42 (34920): Guest Log: 2025-12-02 22:14:39,243 [wrapper] ==== wrapper stderr END ====
2025-12-02 23:14:42 (34920): Guest Log:  *** Error codes and diagnostics ***
2025-12-02 23:14:42 (34920): Guest Log:     "exeErrorCode": 0,
2025-12-02 23:14:42 (34920): Guest Log:     "exeErrorDiag": "",
2025-12-02 23:14:42 (34920): Guest Log:     "pilotErrorCode": 0,
2025-12-02 23:14:42 (34920): Guest Log:     "pilotErrorDiag": "",
2025-12-02 23:14:42 (34920): Guest Log:  *** Listing of results directory ***
2025-12-02 23:14:42 (34920): Guest Log: total 911716
2025-12-02 23:14:42 (34920): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 19:29 pilot3.tar.gz
2025-12-02 23:14:42 (34920): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 19:42 queuedata.json
2025-12-02 23:14:42 (34920): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 19:43 runpilot2-wrapper.sh
2025-12-02 23:14:42 (34920): Guest Log: -rwxr-xr-x. 1 atlas atlas      9331 Dec  2 15:13 init_data.xml
2025-12-02 23:14:42 (34920): Guest Log: -rwxr-xr-x. 1 atlas atlas    590103 Dec  2 15:13 input.tar.gz
2025-12-02 23:14:42 (34920): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec  2 15:13 start_atlas.sh
2025-12-02 23:14:42 (34920): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec  2 15:13 EVNT.47483658._000122.pool.root.1 -> /data/./ATLAS.root_0
2025-12-02 23:14:42 (34920): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Dec  2 15:13 pandaJob.out
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas        49 Dec  2 15:13 setup.sh.local
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas    989202 Dec  2 15:14 agis_schedconf.cvmfs.json
2025-12-02 23:14:42 (34920): Guest Log: drwx------. 5 atlas atlas      4096 Dec  2 15:14 pilot3
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas 920533046 Dec  2 22:13 HITS.47556137._001219.pool.root.1
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas      1041 Dec  2 22:13 memory_monitor_summary.json
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec  2 22:13 agis_ddmendpoints.agis.ALL.json
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas   1250380 Dec  2 22:13 log.47556137._001219.job.log.tgz.1
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas      8656 Dec  2 22:13 heartbeat.json
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas        95 Dec  2 22:14 pilot_heartbeat.json
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas      4877 Dec  2 22:14 pilotlog.txt
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas   3356279 Dec  2 22:14 log.47556137._001219.job.log.1
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas       353 Dec  2 22:14 output.list
2025-12-02 23:14:42 (34920): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec  2 22:14 runtime_log
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas   4628480 Dec  2 22:14 result.tar.gz
2025-12-02 23:14:42 (34920): Guest Log: -rw-r--r--. 1 atlas atlas      9210 Dec  2 22:14 runtime_log.err
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas       652 Dec  2 22:14 DjAODmeDmg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmogJKDmCYOWJn.diag
2025-12-02 23:14:42 (34920): Guest Log: Looking for outputfile HITS.47556137._001219.pool.root.1
2025-12-02 23:14:42 (34920): Guest Log: HITS file was successfully produced
2025-12-02 23:14:42 (34920): Guest Log: -rw-------. 1 atlas atlas 920533046 Dec  2 22:13 /home/atlas/RunAtlas/HITS.47556137._001219.pool.root.1
2025-12-02 23:14:45 (34920): Guest Log: Successfully finished the ATLAS job!
2025-12-02 23:14:45 (34920): Guest Log: Copying the results back to the shared directory!
2025-12-02 23:14:45 (34920): Guest Log:  *** Contents of shared directory: ***
2025-12-02 23:14:45 (34920): Guest Log: total 1302248
2025-12-02 23:14:45 (34920): Guest Log: -rwxrwxrwx. 1 root root 407721177 Dec  2 15:12 ATLAS.root_0
2025-12-02 23:14:45 (34920): Guest Log: -rwxrwxrwx. 1 root root 920533046 Dec  2 22:14 HITS.pool.root.1
2025-12-02 23:14:45 (34920): Guest Log: -rwxrwxrwx. 1 root root      9331 Dec  2 15:12 init_data.xml
2025-12-02 23:14:45 (34920): Guest Log: -rwxrwxrwx. 1 root root    590103 Dec  2 15:12 input.tar.gz
2025-12-02 23:14:45 (34920): Guest Log: -rwxrwxrwx. 1 root root   4628480 Dec  2 22:14 result.tar.gz
2025-12-02 23:14:45 (34920): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec  2 15:12 start_atlas.sh
2025-12-02 23:14:45 (34920): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-02 23:14:45 (34920): VM Completion File Detected.
2025-12-02 23:14:45 (34920): Powering off VM.
2025-12-02 23:14:45 (34920): Successfully stopped VM.
2025-12-02 23:14:45 (34920): Deregistering VM. (boinc_167a78bc1d61b52d, slot#1)
2025-12-02 23:14:45 (34920): Removing network bandwidth throttle group from VM.
2025-12-02 23:14:45 (34920): Removing VM from VirtualBox.
2025-12-02 23:14:51 (34920): called boinc_finish(0)

</stderr_txt>
]]>

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