Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-02 22:01:49 (4148312): vboxwrapper version 26210
2025-12-02 22:01:49 (4148312): BOINC client version: 8.2.4
2025-12-02 22:01:49 (4148312): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-12-02 22:01:49 (4148312): Successfully copied 'init_data.xml' to the shared directory.
2025-12-02 22:01:49 (4148312): Create VM. (boinc_36227ab60e3d8044, slot#8)
2025-12-02 22:01:49 (4148312): Setting Memory Size for VM. (4400MB)
2025-12-02 22:01:49 (4148312): Setting CPU Count for VM. (4)
2025-12-02 22:01:49 (4148312): Setting Chipset Options for VM.
2025-12-02 22:01:50 (4148312): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-02 22:01:50 (4148312): Setting Boot Options for VM.
2025-12-02 22:01:50 (4148312): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-02 22:01:50 (4148312): Enabling VM Network Access.
2025-12-02 22:01:50 (4148312): Disabling USB Support for VM.
2025-12-02 22:01:50 (4148312): Disabling COM Port Support for VM.
2025-12-02 22:01:50 (4148312): Disabling LPT Port Support for VM.
2025-12-02 22:01:50 (4148312): Disabling Audio Support for VM.
2025-12-02 22:01:50 (4148312): Disabling Clipboard Support for VM.
2025-12-02 22:01:50 (4148312): Disabling Drag and Drop Support for VM.
2025-12-02 22:01:50 (4148312): Adding storage controller(s) to VM.
2025-12-02 22:01:50 (4148312): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-02 22:01:50 (4148312): Adding VirtualBox Guest Additions to VM.
2025-12-02 22:01:51 (4148312): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-02 22:01:51 (4148312): forwarding host port 51065 to guest port 80
2025-12-02 22:01:51 (4148312): Enabling remote desktop for VM.
2025-12-02 22:01:51 (4148312): Required extension pack not installed, remote desktop not enabled.
2025-12-02 22:01:51 (4148312): Enabling shared directory for VM.
2025-12-02 22:01:51 (4148312): Starting VM using VBoxManage interface. (boinc_36227ab60e3d8044, slot#8)
2025-12-02 22:01:52 (4148312): Successfully started VM. (PID = '4148700')
2025-12-02 22:01:52 (4148312): Reporting VM Process ID to BOINC.
2025-12-02 22:01:52 (4148312): Guest Log: BIOS: VirtualBox 7.0.16
2025-12-02 22:01:52 (4148312): Guest Log: CPUID EDX: 0x178bfbff
2025-12-02 22:01:52 (4148312): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-02 22:01:52 (4148312): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-02 22:01:52 (4148312): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-02 22:01:52 (4148312): Detected: Web Application Enabled (http://localhost:51065)
2025-12-02 22:01:52 (4148312): Preference change detected
2025-12-02 22:01:52 (4148312): Setting CPU throttle for VM. (100%)
2025-12-02 22:01:52 (4148312): Setting network throttle for VM. (1024KB)
2025-12-02 22:01:52 (4148312): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-02 22:01:54 (4148312): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-02 22:01:54 (4148312): Guest Log: BIOS: Booting from Hard Disk...
2025-12-02 22:01:57 (4148312): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-02 22:01:57 (4148312): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-02 22:01:57 (4148312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-02 22:02:06 (4148312): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-02 22:02:06 (4148312): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-02 22:02:12 (4148312): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-02 22:02:12 (4148312): Guest Log: 00:00:00.000178 main     Log opened 2025-12-02T20:02:11.133262000Z
2025-12-02 22:02:12 (4148312): Guest Log: 00:00:00.000295 main     OS Product: Linux
2025-12-02 22:02:12 (4148312): Guest Log: 00:00:00.000324 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-02 22:02:12 (4148312): Guest Log: 00:00:00.000344 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-02 22:02:12 (4148312): Guest Log: 00:00:00.000364 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-02 22:02:12 (4148312): Guest Log: 00:00:00.000365 main     Process ID: 1307
2025-12-02 22:02:12 (4148312): Guest Log: 00:00:00.000366 main     Package type: LINUX_64BITS_GENERIC
2025-12-02 22:02:12 (4148312): Guest Log: 00:00:00.001966 main     5.2.32 r132073 started. Verbose level = 0
2025-12-02 22:02:13 (4148312): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-02 22:02:13 (4148312): Guest Log: [INFO] Mounting shared directory
2025-12-02 22:02:13 (4148312): Guest Log: [INFO] Checking for init_data.xml
2025-12-02 22:02:37 (4148312): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-02 22:02:37 (4148312): Guest Log: [INFO] Detected branch: prod
2025-12-02 22:02:38 (4148312): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-02 22:02:38 (4148312): Guest Log: Copying input files
2025-12-02 22:02:40 (4148312): Guest Log: Copied input files into RunAtlas.
2025-12-02 22:02:40 (4148312): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-02 22:02:40 (4148312): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-02 22:02:40 (4148312): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-02 22:02:40 (4148312): Guest Log: Further information can be found at the LHC@home message board.
2025-12-02 22:02:50 (4148312): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-02 22:02:50 (4148312): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-02 22:02:50 (4148312): Guest Log: 2.6.3.0 1587 0 32040 153567 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-12-02 22:02:51 (4148312): Guest Log: copied the webapp to /var/www
2025-12-02 22:02:51 (4148312): Guest Log: ATHENA_PROC_NUMBER=4
2025-12-02 22:02:51 (4148312): Guest Log: ATHENA_CORE_NUMBER=4
2025-12-02 22:02:52 (4148312): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-02 22:02:52 (4148312): Guest Log:  *** Starting ATLAS job. (PandaID=6895329692 taskID=47556137) ***
2025-12-02 23:40:53 (4148312): Status Report: Elapsed Time: '6000.000000'
2025-12-02 23:40:53 (4148312): Status Report: CPU Time: '21489.020000'
2025-12-03 01:19:53 (4148312): Status Report: Elapsed Time: '12000.000000'
2025-12-03 01:19:53 (4148312): Status Report: CPU Time: '45186.380000'
2025-12-03 02:58:53 (4148312): Status Report: Elapsed Time: '18000.000000'
2025-12-03 02:58:53 (4148312): Status Report: CPU Time: '68887.040000'
2025-12-03 04:37:54 (4148312): Status Report: Elapsed Time: '24000.000000'
2025-12-03 04:37:54 (4148312): Status Report: CPU Time: '92590.730000'
2025-12-03 06:16:54 (4148312): Status Report: Elapsed Time: '30000.000000'
2025-12-03 06:16:54 (4148312): Status Report: CPU Time: '116296.090000'
2025-12-03 07:55:55 (4148312): Status Report: Elapsed Time: '36000.000000'
2025-12-03 07:55:55 (4148312): Status Report: CPU Time: '140001.960000'
2025-12-03 09:34:55 (4148312): Status Report: Elapsed Time: '42000.000000'
2025-12-03 09:34:55 (4148312): Status Report: CPU Time: '163707.280000'
2025-12-03 11:13:56 (4148312): Status Report: Elapsed Time: '48000.000000'
2025-12-03 11:13:56 (4148312): Status Report: CPU Time: '187417.430000'
2025-12-03 11:27:01 (4148312): Guest Log:  *** Job finished ***
2025-12-03 11:27:01 (4148312): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:48,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:48,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:52,661 | INFO     | [monitor] cgroup control has ended
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:54,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040705976128)>', '<ExcThread(monitor, started 140040277579520)>']
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:55,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:55,183 | INFO     | [monitor] control thread has ended
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,510 | INFO     | all workflow threads have been joined
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,510 | INFO     | end of generic workflow (traces error code: 0)
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,510 | INFO     | traces error code: 0
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,510 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,614 [wrapper] ==== pilot stdout END ====
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,626 [wrapper] ==== wrapper stdout RESUME ====
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,637 [wrapper] pilotpid: 5986
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,648 [wrapper] Pilot exit status: 0
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,679 [wrapper] pandaids: 6895329692
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,737 [wrapper] cleanup supervisor_pilot   868 5987
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,745 [wrapper] Test setup, not cleaning
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,753 [wrapper] apfmon messages muted
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,763 [wrapper] ==== wrapper stdout END ====
2025-12-03 11:27:01 (4148312): Guest Log: 2025-12-03 09:26:59,771 [wrapper] ==== wrapper stderr END ====
2025-12-03 11:27:01 (4148312): Guest Log:  *** Error codes and diagnostics ***
2025-12-03 11:27:01 (4148312): Guest Log:     "exeErrorCode": 0,
2025-12-03 11:27:01 (4148312): Guest Log:     "exeErrorDiag": "",
2025-12-03 11:27:01 (4148312): Guest Log:     "pilotErrorCode": 0,
2025-12-03 11:27:01 (4148312): Guest Log:     "pilotErrorDiag": "",
2025-12-03 11:27:01 (4148312): Guest Log:  *** Listing of results directory ***
2025-12-03 11:27:01 (4148312): Guest Log: total 893616
2025-12-03 11:27:01 (4148312): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 19:29 pilot3.tar.gz
2025-12-03 11:27:01 (4148312): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 19:40 queuedata.json
2025-12-03 11:27:01 (4148312): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 19:40 runpilot2-wrapper.sh
2025-12-03 11:27:01 (4148312): Guest Log: -rw-r--r--. 1 atlas atlas    590101 Dec  2 20:02 input.tar.gz
2025-12-03 11:27:01 (4148312): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Dec  2 20:02 start_atlas.sh
2025-12-03 11:27:01 (4148312): Guest Log: -rw-r--r--. 1 atlas atlas      8973 Dec  2 20:02 init_data.xml
2025-12-03 11:27:01 (4148312): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec  2 20:02 EVNT.47483658._000120.pool.root.1 -> /data/./ATLAS.root_0
2025-12-03 11:27:01 (4148312): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Dec  2 20:02 pandaJob.out
2025-12-03 11:27:01 (4148312): Guest Log: -rw-------. 1 atlas atlas    989224 Dec  2 20:03 agis_schedconf.cvmfs.json
2025-12-03 11:27:01 (4148312): Guest Log: drwx------. 5 atlas atlas      4096 Dec  2 20:03 pilot3
2025-12-03 11:27:01 (4148312): Guest Log: -rw-------. 1 atlas atlas 895771281 Dec  3 09:25 HITS.47556137._001199.pool.root.1
2025-12-03 11:27:01 (4148312): Guest Log: -rw-------. 1 atlas atlas      1042 Dec  3 09:25 memory_monitor_summary.json
2025-12-03 11:27:01 (4148312): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec  3 09:25 agis_ddmendpoints.agis.ALL.json
2025-12-03 11:27:01 (4148312): Guest Log: -rw-------. 1 atlas atlas   1542175 Dec  3 09:25 log.47556137._001199.job.log.tgz.1
2025-12-03 11:27:01 (4148312): Guest Log: -rw-------. 1 atlas atlas      8675 Dec  3 09:26 heartbeat.json
2025-12-03 11:27:01 (4148312): Guest Log: -rw-------. 1 atlas atlas        95 Dec  3 09:26 pilot_heartbeat.json
2025-12-03 11:27:01 (4148312): Guest Log: -rw-------. 1 atlas atlas      4805 Dec  3 09:26 pilotlog.txt
2025-12-03 11:27:01 (4148312): Guest Log: -rw-------. 1 atlas atlas   6179365 Dec  3 09:26 log.47556137._001199.job.log.1
2025-12-03 11:27:01 (4148312): Guest Log: -rw-------. 1 atlas atlas       353 Dec  3 09:26 output.list
2025-12-03 11:27:01 (4148312): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec  3 09:26 runtime_log
2025-12-03 11:27:01 (4148312): Guest Log: -rw-------. 1 atlas atlas   7741440 Dec  3 09:26 result.tar.gz
2025-12-03 11:27:01 (4148312): Guest Log: -rw-r--r--. 1 atlas atlas      8765 Dec  3 09:26 runtime_log.err
2025-12-03 11:27:01 (4148312): Guest Log: -rw-------. 1 atlas atlas       668 Dec  3 09:26 nUHKDmpAmg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlgJKDmOzs8wm.diag
2025-12-03 11:27:01 (4148312): Guest Log: Looking for outputfile HITS.47556137._001199.pool.root.1
2025-12-03 11:27:01 (4148312): Guest Log: HITS file was successfully produced
2025-12-03 11:27:01 (4148312): Guest Log: -rw-------. 1 atlas atlas 895771281 Dec  3 09:25 /home/atlas/RunAtlas/HITS.47556137._001199.pool.root.1
2025-12-03 11:27:01 (4148312): Guest Log: Successfully finished the ATLAS job!
2025-12-03 11:27:01 (4148312): Guest Log: Copying the results back to the shared directory!
2025-12-03 11:27:01 (4148312): Guest Log:  *** Contents of shared directory: ***
2025-12-03 11:27:01 (4148312): Guest Log: total 407172
2025-12-03 11:27:01 (4148312): Guest Log: -rw-r--r--. 1 root root 408579696 Dec  2 20:01 ATLAS.root_0
2025-12-03 11:27:01 (4148312): Guest Log: -rw-r--r--. 1 root root      8973 Dec  2 20:01 init_data.xml
2025-12-03 11:27:01 (4148312): Guest Log: -rw-r--r--. 1 root root    590101 Dec  2 20:01 input.tar.gz
2025-12-03 11:27:01 (4148312): Guest Log: -rw-r--r--. 1 root root   7741440 Dec  3 09:27 result.tar.gz
2025-12-03 11:27:01 (4148312): Guest Log: -rw-r--r--. 1 root root     15847 Dec  2 20:01 start_atlas.sh
2025-12-03 11:27:01 (4148312): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-03 11:27:02 (4148312): VM Completion File Detected.
2025-12-03 11:27:02 (4148312): Powering off VM.
2025-12-03 11:27:02 (4148312): Successfully stopped VM.
2025-12-03 11:27:02 (4148312): Deregistering VM. (boinc_36227ab60e3d8044, slot#8)
2025-12-03 11:27:02 (4148312): Removing network bandwidth throttle group from VM.
2025-12-03 11:27:02 (4148312): Removing VM from VirtualBox.
2025-12-03 11:27:07 (4148312): called boinc_finish(0)

</stderr_txt>
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