Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:47:04 (1509086): wrapper (7.7.26015): starting
23:47:04 (1509086): wrapper: running run_atlas (--nthreads 3)
[2025-12-04 23:47:04] Arguments: --nthreads 3
[2025-12-04 23:47:04] Threads: 3
[2025-12-04 23:47:04] Checking for CVMFS
[2025-12-04 23:47:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-04 23:47:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-04 23:47:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-04 23:47:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-04 23:47:05] 2.9.2.0 2549270 23443 105664 153639 3 110 32001406 36864000 0 130560 1 8738338 99.908 1306103 1771 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-04 23:47:05] CVMFS is ok
[2025-12-04 23:47:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-04 23:47:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-04 23:47:05] Further information can be found at the LHC@home message board.
[2025-12-04 23:47:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-04 23:47:05] Checking for apptainer binary...
[2025-12-04 23:47:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-04 23:47:05] Running /usr/bin/apptainer --version
[2025-12-04 23:47:05] apptainer version 1.4.1-1.1
[2025-12-04 23:47:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-04 23:47:05] atlasA214
[2025-12-04 23:47:05] apptainer works
[2025-12-04 23:47:05] Set ATHENA_PROC_NUMBER=3
[2025-12-04 23:47:05] Set ATHENA_CORE_NUMBER=3
[2025-12-04 23:47:05] Starting ATLAS job with PandaID=6895350367
[2025-12-04 23:47:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-05 08:02:49]  *** The last 200 lines of the pilot log: ***
[2025-12-05 08:02:49] 2025-12-05 07:02:33,995 | INFO     | extracted standard memory fields from prmon json
[2025-12-05 08:02:49] 2025-12-05 07:02:33,995 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-05 08:02:49] 2025-12-05 07:02:33,998 | INFO     | fitting pss+swap vs Time
[2025-12-05 08:02:49] 2025-12-05 07:02:33,998 | INFO     | sum of square deviations: 35814878028.0
[2025-12-05 08:02:49] 2025-12-05 07:02:34,000 | INFO     | sum of deviations: 287423368256.0001
[2025-12-05 08:02:49] 2025-12-05 07:02:34,000 | INFO     | mean x: 1764903273.0
[2025-12-05 08:02:49] 2025-12-05 07:02:34,000 | INFO     | mean y: 2300073.6509240246
[2025-12-05 08:02:49] 2025-12-05 07:02:34,000 | INFO     | intersect: -14161490822.833847
[2025-12-05 08:02:49] 2025-12-05 07:02:34,001 | INFO     | chi2: 3.6248324102874463
[2025-12-05 08:02:49] 2025-12-05 07:02:34,001 | INFO     | sum of square deviations: 34723034300.5
[2025-12-05 08:02:49] 2025-12-05 07:02:34,003 | INFO     | sum of deviations: 332621867103.5
[2025-12-05 08:02:49] 2025-12-05 07:02:34,003 | INFO     | mean x: 1764903120.5
[2025-12-05 08:02:49] 2025-12-05 07:02:34,003 | INFO     | mean y: 2306347.1804979253
[2025-12-05 08:02:49] 2025-12-05 07:02:34,003 | INFO     | intersect: -16904204936.28329
[2025-12-05 08:02:49] 2025-12-05 07:02:34,003 | INFO     | chi2: 2.698278925900408
[2025-12-05 08:02:49] 2025-12-05 07:02:34,003 | INFO     | current chi2=2.698278925900408 (change=25.561277860941527 %)
[2025-12-05 08:02:49] 2025-12-05 07:02:34,003 | INFO     | sum of square deviations: 33653609598.0
[2025-12-05 08:02:49] 2025-12-05 07:02:34,005 | INFO     | sum of deviations: 327388490962.0
[2025-12-05 08:02:49] 2025-12-05 07:02:34,005 | INFO     | mean x: 1764902968.0
[2025-12-05 08:02:49] 2025-12-05 07:02:34,005 | INFO     | mean y: 2305600.9245283017
[2025-12-05 08:02:49] 2025-12-05 07:02:34,005 | INFO     | intersect: -17166994402.550095
[2025-12-05 08:02:49] 2025-12-05 07:02:34,005 | INFO     | chi2: 2.696468641127639
[2025-12-05 08:02:49] 2025-12-05 07:02:34,005 | INFO     | current chi2=2.696468641127639 (change=0.06709034990387978 %)
[2025-12-05 08:02:49] 2025-12-05 07:02:34,005 | INFO     | right removable region: 476
[2025-12-05 08:02:49] 2025-12-05 07:02:34,005 | INFO     | sum of square deviations: 34723034300.5
[2025-12-05 08:02:49] 2025-12-05 07:02:34,007 | INFO     | sum of deviations: 176936920097.5
[2025-12-05 08:02:49] 2025-12-05 07:02:34,007 | INFO     | mean x: 1764903425.5
[2025-12-05 08:02:49] 2025-12-05 07:02:34,007 | INFO     | mean y: 2315485.968879668
[2025-12-05 08:02:49] 2025-12-05 07:02:34,007 | INFO     | intersect: -8991039578.424236
[2025-12-05 08:02:49] 2025-12-05 07:02:34,008 | INFO     | chi2: 1.4149703360107633
[2025-12-05 08:02:49] 2025-12-05 07:02:34,008 | INFO     | current chi2=1.4149703360107633 (change=60.96453088437935 %)
[2025-12-05 08:02:49] 2025-12-05 07:02:34,008 | INFO     | sum of square deviations: 33653609598.0
[2025-12-05 08:02:49] 2025-12-05 07:02:34,010 | INFO     | sum of deviations: 135654348091.99994
[2025-12-05 08:02:49] 2025-12-05 07:02:34,010 | INFO     | mean x: 1764903578.0
[2025-12-05 08:02:49] 2025-12-05 07:02:34,010 | INFO     | mean y: 2321350.6666666665
[2025-12-05 08:02:49] 2025-12-05 07:02:34,010 | INFO     | intersect: -7111829172.225727
[2025-12-05 08:02:49] 2025-12-05 07:02:34,010 | INFO     | chi2: 1.0212779801353786
[2025-12-05 08:02:49] 2025-12-05 07:02:34,010 | INFO     | current chi2=1.0212779801353786 (change=27.823364621573944 %)
[2025-12-05 08:02:49] 2025-12-05 07:02:34,010 | INFO     | sum of square deviations: 32606371358.0
[2025-12-05 08:02:49] 2025-12-05 07:02:34,012 | INFO     | sum of deviations: 120858542593.49997
[2025-12-05 08:02:49] 2025-12-05 07:02:34,012 | INFO     | mean x: 1764903730.5
[2025-12-05 08:02:49] 2025-12-05 07:02:34,012 | INFO     | mean y: 2323504.9809322036
[2025-12-05 08:02:49] 2025-12-05 07:02:34,012 | INFO     | intersect: -6539456024.673079
[2025-12-05 08:02:49] 2025-12-05 07:02:34,012 | INFO     | chi2: 1.0022684267340465
[2025-12-05 08:02:49] 2025-12-05 07:02:34,013 | INFO     | current chi2=1.0022684267340465 (change=1.861349580729458 %)
[2025-12-05 08:02:49] 2025-12-05 07:02:34,013 | INFO     | left removable region: 30
[2025-12-05 08:02:49] 2025-12-05 07:02:34,013 | INFO     | sum of square deviations: 27509380907.5
[2025-12-05 08:02:49] 2025-12-05 07:02:34,014 | INFO     | sum of deviations: 125463225925.5
[2025-12-05 08:02:49] 2025-12-05 07:02:34,014 | INFO     | mean x: 1764903852.5
[2025-12-05 08:02:49] 2025-12-05 07:02:34,014 | INFO     | mean y: 2335480.2130044843
[2025-12-05 08:02:49] 2025-12-05 07:02:34,014 | INFO     | intersect: -8046938021.3445425
[2025-12-05 08:02:49] 2025-12-05 07:02:34,015 | INFO     | chi2: 0.03432656441420428
[2025-12-05 08:02:49] 2025-12-05 07:02:34,015 | INFO     | current memory leak: 4.56 B/s (using 446 data points, chi2=0.03)
[2025-12-05 08:02:49] 2025-12-05 07:02:34,015 | INFO     | could have reported an average CPU frequency of 3862 MHz (20 samples)
[2025-12-05 08:02:49] 2025-12-05 07:02:34,015 | INFO     | ..............................
[2025-12-05 08:02:49] 2025-12-05 07:02:34,015 | INFO     | . Timing measurements:
[2025-12-05 08:02:49] 2025-12-05 07:02:34,015 | INFO     | . get job = 0 s
[2025-12-05 08:02:49] 2025-12-05 07:02:34,015 | INFO     | . initial setup = 1 s
[2025-12-05 08:02:49] 2025-12-05 07:02:34,015 | INFO     | . payload setup = 2 s
[2025-12-05 08:02:49] 2025-12-05 07:02:34,015 | INFO     | . stage-in = 0 s
[2025-12-05 08:02:49] 2025-12-05 07:02:34,015 | INFO     | . payload execution = 29697 s
[2025-12-05 08:02:49] 2025-12-05 07:02:34,015 | INFO     | . stage-out = 1 s
[2025-12-05 08:02:49] 2025-12-05 07:02:34,015 | INFO     | . log creation = 0 s
[2025-12-05 08:02:49] 2025-12-05 07:02:34,015 | INFO     | ..............................
[2025-12-05 08:02:49] 2025-12-05 07:02:34,174 | INFO     | time since job start (29724s) is within the limit (172800.0s)
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | 
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | job summary report
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | --------------------------------------------------
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | PanDA job id: 6895350367
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | task id: 47556137
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | errors: (none)
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | pilot state: finished 
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | transexitcode: 0
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | exeerrorcode: 0
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | exeerrordiag: 
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | exitcode: 0
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | exitmsg: OK
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | cpuconsumptiontime: 87829 s
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | nevents: 1000
[2025-12-05 08:02:49] 2025-12-05 07:02:34,482 | INFO     | neventsw: 0
[2025-12-05 08:02:49] 2025-12-05 07:02:34,483 | INFO     | pid: 1519254
[2025-12-05 08:02:49] 2025-12-05 07:02:34,483 | INFO     | pgrp: 1519254
[2025-12-05 08:02:49] 2025-12-05 07:02:34,483 | INFO     | corecount: 3
[2025-12-05 08:02:49] 2025-12-05 07:02:34,483 | INFO     | event service: False
[2025-12-05 08:02:49] 2025-12-05 07:02:34,483 | INFO     | sizes: {0: 2284267, 2: 2284529, 10: 2284557, 29704: 2323801, 29705: 2332801, 29707: 2332857, 29710: 2333231}
[2025-12-05 08:02:49] 2025-12-05 07:02:34,483 | INFO     | --------------------------------------------------
[2025-12-05 08:02:49] 2025-12-05 07:02:34,483 | INFO     | 
[2025-12-05 08:02:49] 2025-12-05 07:02:34,483 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-05 08:02:49] 2025-12-05 07:02:34,499 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,499 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-05 08:02:49] 2025-12-05 07:02:34,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,500 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-05 08:02:49] 2025-12-05 07:02:34,500 | INFO     | job 6895350367 has completed (purged errors)
[2025-12-05 08:02:49] 2025-12-05 07:02:34,500 | INFO     | overall cleanup function is called
[2025-12-05 08:02:49] 2025-12-05 07:02:35,505 | INFO     | --- collectZombieJob: --- 10, [1519254]
[2025-12-05 08:02:49] 2025-12-05 07:02:35,505 | INFO     | zombie collector waiting for pid 1519254
[2025-12-05 08:02:49] 2025-12-05 07:02:35,505 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-05 08:02:49] 2025-12-05 07:02:35,505 | INFO     | collected zombie processes
[2025-12-05 08:02:49] 2025-12-05 07:02:35,505 | INFO     | will attempt to kill all subprocesses of pid=1519254
[2025-12-05 08:02:49] 2025-12-05 07:02:35,547 | INFO     | process IDs to be killed: [1519254] (in reverse order)
[2025-12-05 08:02:49] 2025-12-05 07:02:35,571 | WARNING  | found no corresponding commands to process id(s)
[2025-12-05 08:02:49] 2025-12-05 07:02:35,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-05 08:02:49] 2025-12-05 07:02:35,572 | INFO     | did not find any defunct processes belonging to 1519254
[2025-12-05 08:02:49] 2025-12-05 07:02:35,573 | INFO     | did not find any defunct processes belonging to 1519254
[2025-12-05 08:02:49] 2025-12-05 07:02:35,574 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-05 08:02:49] 2025-12-05 07:02:35,574 | INFO     | ready for new job
[2025-12-05 08:02:49] 2025-12-05 07:02:35,574 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-05 08:02:49] 2025-12-05 07:02:35,575 | INFO     | ***************************************
[2025-12-05 08:02:49] 2025-12-05 07:02:35,575 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-05 08:02:49] 2025-12-05 07:02:35,575 | INFO     | ***************************************
[2025-12-05 08:02:49] 2025-12-05 07:02:35,575 | INFO     | 
[2025-12-05 08:02:49] 2025-12-05 07:02:35,575 | INFO     | architecture information:
[2025-12-05 08:02:49] 2025-12-05 07:02:35,576 | INFO     | executing command: cat /etc/os-release
[2025-12-05 08:02:49] 2025-12-05 07:02:35,584 | INFO     | cat /etc/os-release:
[2025-12-05 08:02:49] NAME="CentOS Linux"
[2025-12-05 08:02:49] VERSION="7 (Core)"
[2025-12-05 08:02:49] ID="centos"
[2025-12-05 08:02:49] ID_LIKE="rhel fedora"
[2025-12-05 08:02:49] VERSION_ID="7"
[2025-12-05 08:02:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-05 08:02:49] ANSI_COLOR="0;31"
[2025-12-05 08:02:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-05 08:02:49] HOME_URL="https://www.centos.org/"
[2025-12-05 08:02:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-05 08:02:49] 
[2025-12-05 08:02:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-05 08:02:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-05 08:02:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-05 08:02:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-05 08:02:49] 
[2025-12-05 08:02:49] 2025-12-05 07:02:35,584 | INFO     | ***************************************
[2025-12-05 08:02:49] 2025-12-05 07:02:36,088 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-05 08:02:49] 2025-12-05 07:02:36,101 | INFO     | sufficient remaining disk space (227194961920 B)
[2025-12-05 08:02:49] 2025-12-05 07:02:36,101 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-05 08:02:49] 2025-12-05 07:02:36,101 | INFO     | current server update state: UPDATING_FINAL
[2025-12-05 08:02:49] 2025-12-05 07:02:36,101 | INFO     | update_server=False
[2025-12-05 08:02:49] 2025-12-05 07:02:36,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-05 08:02:49] 2025-12-05 07:02:36,101 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-05 08:02:49] 2025-12-05 07:02:36,102 | INFO     | found 0 job(s) in 20 queues
[2025-12-05 08:02:49] 2025-12-05 07:02:36,102 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-05 08:02:49] 2025-12-05 07:02:36,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-05 08:02:49] 2025-12-05 07:02:36,652 | INFO     | all data control threads have been joined
[2025-12-05 08:02:49] 2025-12-05 07:02:36,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-05 08:02:49] 2025-12-05 07:02:36,865 | INFO     | aborting loop
[2025-12-05 08:02:49] 2025-12-05 07:02:37,107 | INFO     | [job] retrieve thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:37,107 | INFO     | [payload] failed_post thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:37,271 | INFO     | all payload control threads have been joined
[2025-12-05 08:02:49] 2025-12-05 07:02:37,425 | INFO     | [payload] validate_pre thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:37,474 | INFO     | all job control threads have been joined
[2025-12-05 08:02:49] 2025-12-05 07:02:37,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-05 08:02:49] 2025-12-05 07:02:37,658 | INFO     | [data] control thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:37,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-05 08:02:49] 2025-12-05 07:02:37,829 | INFO     | [payload] execute_payloads thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:37,871 | INFO     | [job] job monitor thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:37,943 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:37,990 | INFO     | [data] copytool_in thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:38,277 | INFO     | [payload] control thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:38,461 | INFO     | [payload] validate_post thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:38,477 | INFO     | [job] control thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:38,539 | INFO     | [job] validate thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:38,551 | INFO     | [job] create_data_payload thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:39,056 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-05 08:02:49] 2025-12-05 07:02:39,602 | INFO     | [data] copytool_out thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:40,062 | INFO     | [job] queue monitor thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:41,735 | INFO     | [data] queue_monitor thread has finished
[2025-12-05 08:02:49] 2025-12-05 07:02:43,099 | INFO     | [monitor] cgroup control has ended
[2025-12-05 08:02:49] 2025-12-05 07:02:44,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566886565696)>', '<ExcThread(monitor, started 140566402680576)>']
[2025-12-05 08:02:49] 2025-12-05 07:02:44,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-05 08:02:49] 2025-12-05 07:02:44,142 | INFO     | [monitor] control thread has ended
[2025-12-05 08:02:49] 2025-12-05 07:02:49,113 | INFO     | all workflow threads have been joined
[2025-12-05 08:02:49] 2025-12-05 07:02:49,113 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-05 08:02:49] 2025-12-05 07:02:49,114 | INFO     | traces error code: 0
[2025-12-05 08:02:49] 2025-12-05 07:02:49,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-05 08:02:49] 2025-12-05 07:02:49,163 [wrapper] ==== pilot stdout END ====
[2025-12-05 08:02:49] 2025-12-05 07:02:49,166 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-05 08:02:49] 2025-12-05 07:02:49,168 [wrapper] pilotpid: 1512808
[2025-12-05 08:02:49] 2025-12-05 07:02:49,170 [wrapper] Pilot exit status: 0
[2025-12-05 08:02:49] 2025-12-05 07:02:49,177 [wrapper] pandaids: 6895350367
[2025-12-05 08:02:49] 2025-12-05 07:02:49,193 [wrapper] cleanup supervisor_pilot 1572022 1512809
[2025-12-05 08:02:49] 2025-12-05 07:02:49,195 [wrapper] Test setup, not cleaning
[2025-12-05 08:02:49] 2025-12-05 07:02:49,197 [wrapper] apfmon messages muted
[2025-12-05 08:02:49] 2025-12-05 07:02:49,200 [wrapper] ==== wrapper stdout END ====
[2025-12-05 08:02:49] 2025-12-05 07:02:49,202 [wrapper] ==== wrapper stderr END ====
[2025-12-05 08:02:49]  *** Error codes and diagnostics ***
[2025-12-05 08:02:49]     "exeErrorCode": 0,
[2025-12-05 08:02:49]     "exeErrorDiag": "",
[2025-12-05 08:02:49]     "pilotErrorCode": 0,
[2025-12-05 08:02:49]     "pilotErrorDiag": "",
[2025-12-05 08:02:49]  *** Listing of results directory ***
[2025-12-05 08:02:49] total 1326032
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc    576529 Nov 22 21:41 pilot3.tar.gz
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc      5112 Nov 22 22:08 queuedata.json
[2025-12-05 08:02:49] -rwx------ 1 boinc boinc     36292 Nov 22 22:08 runpilot2-wrapper.sh
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc       100 Dec  4 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-05 08:02:49] -rwxr-xr-x 1 boinc boinc      7986 Dec  4 23:47 run_atlas
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc       105 Dec  4 23:47 job.xml
[2025-12-05 08:02:49] -rw-r--r-- 2 boinc boinc 413033286 Dec  4 23:47 EVNT.47483658._000508.pool.root.1
[2025-12-05 08:02:49] -rw-r--r-- 2 boinc boinc    590096 Dec  4 23:47 input.tar.gz
[2025-12-05 08:02:49] -rw-r--r-- 2 boinc boinc     15847 Dec  4 23:47 start_atlas.sh
[2025-12-05 08:02:49] drwxrwx--x 2 boinc boinc      4096 Dec  4 23:47 shared
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc         0 Dec  4 23:47 boinc_setup_complete
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc      6444 Dec  4 23:47 init_data.xml
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc         0 Dec  4 23:47 boinc_lockfile
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc      2785 Dec  4 23:47 pandaJob.out
[2025-12-05 08:02:49] -rw------- 1 boinc boinc    985572 Dec  4 23:47 agis_schedconf.cvmfs.json
[2025-12-05 08:02:49] drwx------ 5 boinc boinc      4096 Dec  4 23:47 pilot3
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc       531 Dec  5 07:59 boinc_task_state.xml
[2025-12-05 08:02:49] -rw------- 1 boinc boinc        95 Dec  5 08:01 pilot_heartbeat.json
[2025-12-05 08:02:49] -rw------- 1 boinc boinc 930200580 Dec  5 08:02 HITS.47556137._005034.pool.root.1
[2025-12-05 08:02:49] -rw------- 1 boinc boinc      1025 Dec  5 08:02 memory_monitor_summary.json
[2025-12-05 08:02:49] -rw------- 1 boinc boinc   1516240 Dec  5 08:02 agis_ddmendpoints.agis.ALL.json
[2025-12-05 08:02:49] -rw------- 1 boinc boinc   1168011 Dec  5 08:02 log.47556137._005034.job.log.tgz.1
[2025-12-05 08:02:49] -rw------- 1 boinc boinc      8572 Dec  5 08:02 heartbeat.json
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc      8192 Dec  5 08:02 boinc_mmap_file
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc        28 Dec  5 08:02 wrapper_checkpoint.txt
[2025-12-05 08:02:49] -rw------- 1 boinc boinc      4556 Dec  5 08:02 pilotlog.txt
[2025-12-05 08:02:49] -rw------- 1 boinc boinc   4185140 Dec  5 08:02 log.47556137._005034.job.log.1
[2025-12-05 08:02:49] -rw------- 1 boinc boinc       353 Dec  5 08:02 output.list
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc       620 Dec  5 08:02 runtime_log
[2025-12-05 08:02:49] -rw------- 1 boinc boinc   5376000 Dec  5 08:02 result.tar.gz
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc      8913 Dec  5 08:02 runtime_log.err
[2025-12-05 08:02:49] -rw------- 1 boinc boinc       668 Dec  5 08:02 kmlKDmx19g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlPKKDmlgHuCn.diag
[2025-12-05 08:02:49] -rw-r--r-- 1 boinc boinc     20969 Dec  5 08:02 stderr.txt
[2025-12-05 08:02:49] HITS file was successfully produced:
[2025-12-05 08:02:49] -rw------- 1 boinc boinc 930200580 Dec  5 08:02 shared/HITS.pool.root.1
[2025-12-05 08:02:49]  *** Contents of shared directory: ***
[2025-12-05 08:02:49] total 1317612
[2025-12-05 08:02:49] -rw-r--r-- 2 boinc boinc 413033286 Dec  4 23:47 ATLAS.root_0
[2025-12-05 08:02:49] -rw-r--r-- 2 boinc boinc    590096 Dec  4 23:47 input.tar.gz
[2025-12-05 08:02:49] -rw-r--r-- 2 boinc boinc     15847 Dec  4 23:47 start_atlas.sh
[2025-12-05 08:02:49] -rw------- 1 boinc boinc 930200580 Dec  5 08:02 HITS.pool.root.1
[2025-12-05 08:02:49] -rw------- 1 boinc boinc   5376000 Dec  5 08:02 result.tar.gz
08:02:51 (1509086): run_atlas exited; CPU time 87844.361228
08:02:51 (1509086): called boinc_finish(0)

</stderr_txt>
]]>

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