Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:56:10 (562250): wrapper (7.7.26015): starting
04:56:10 (562250): wrapper: running run_atlas (--nthreads 4)
[2025-12-05 04:56:10] Arguments: --nthreads 4
[2025-12-05 04:56:10] Threads: 4
[2025-12-05 04:56:10] Checking for CVMFS
[2025-12-05 04:56:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-05 04:56:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-05 04:56:10] Running cvmfs_config stat atlas.cern.ch
[2025-12-05 04:56:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-05 04:56:10] 2.9.2.0 1682378 20884 96568 153639 2 110 29486779 36864001 0 130560 0 8846061 99.983 708068 1099 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-05 04:56:10] CVMFS is ok
[2025-12-05 04:56:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-05 04:56:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-05 04:56:10] Further information can be found at the LHC@home message board.
[2025-12-05 04:56:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-05 04:56:10] Checking for apptainer binary...
[2025-12-05 04:56:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-05 04:56:10] Running /usr/bin/apptainer --version
[2025-12-05 04:56:10] apptainer version 1.4.1-1.1
[2025-12-05 04:56:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-05 04:56:10] thA315b
[2025-12-05 04:56:10] apptainer works
[2025-12-05 04:56:10] Set ATHENA_PROC_NUMBER=4
[2025-12-05 04:56:10] Set ATHENA_CORE_NUMBER=4
[2025-12-05 04:56:10] Starting ATLAS job with PandaID=6891558259
[2025-12-05 04:56:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-05 10:51:07]  *** The last 200 lines of the pilot log: ***
[2025-12-05 10:51:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-05 10:51:07] 
[2025-12-05 10:51:07] 2025-12-05 09:50:35,959 | INFO     | ***************************************
[2025-12-05 10:51:07] 2025-12-05 09:50:36,462 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-05 10:51:07] 2025-12-05 09:50:36,476 | INFO     | sufficient remaining disk space (330524786688 B)
[2025-12-05 10:51:07] 2025-12-05 09:50:36,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-05 10:51:07] 2025-12-05 09:50:36,476 | INFO     | current server update state: UPDATING_FINAL
[2025-12-05 10:51:07] 2025-12-05 09:50:36,476 | INFO     | update_server=False
[2025-12-05 10:51:07] 2025-12-05 09:50:36,476 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-05 10:51:07] 2025-12-05 09:50:36,476 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-05 10:51:07] 2025-12-05 09:50:36,950 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-05 10:51:07] 2025-12-05 09:50:36,950 | INFO     | aborting loop
[2025-12-05 10:51:07] 2025-12-05 09:50:37,147 | INFO     | all job control threads have been joined
[2025-12-05 10:51:07] 2025-12-05 09:50:37,152 | INFO     | all payload control threads have been joined
[2025-12-05 10:51:07] 2025-12-05 09:50:37,394 | INFO     | all data control threads have been joined
[2025-12-05 10:51:07] 2025-12-05 09:50:37,477 | INFO     | [job] queue monitor thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:37,478 | INFO     | [job] retrieve thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:37,573 | INFO     | [payload] validate_post thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:37,790 | INFO     | [payload] execute_payloads thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:37,907 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-05 10:51:07] 2025-12-05 09:50:37,956 | INFO     | [job] job monitor thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:38,153 | INFO     | [job] control thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:38,157 | INFO     | [payload] control thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:38,400 | INFO     | [data] control thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:38,487 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:38,636 | INFO     | [payload] failed_post thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:38,718 | INFO     | [job] validate thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:38,722 | INFO     | [data] copytool_in thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:38,723 | INFO     | [payload] validate_pre thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:38,784 | INFO     | [job] create_data_payload thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:39,154 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-05 10:51:07] 2025-12-05 09:50:39,914 | INFO     | [data] copytool_out thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:43,161 | INFO     | [data] queue_monitor thread has finished
[2025-12-05 10:51:07] 2025-12-05 09:50:47,046 | INFO     | [monitor] cgroup control has ended
[2025-12-05 10:51:07] 2025-12-05 09:50:48,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139743818602304)>', '<ExcThread(monitor, started 139743186638592)>']
[2025-12-05 10:51:07] 2025-12-05 09:50:53,037 | INFO     | all workflow threads have been joined
[2025-12-05 10:51:07] 2025-12-05 09:50:53,037 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-05 10:51:07] 2025-12-05 09:50:53,037 | INFO     | traces error code: 0
[2025-12-05 10:51:07] 2025-12-05 09:50:53,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-05 10:51:07] 2025-12-05 09:51:07,328 | INFO     | PID=566043 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-05 10:51:07] 2025-12-05 09:51:07,329 | INFO     | found 0 job(s) in 20 queues
[2025-12-05 10:51:07] 2025-12-05 09:51:07,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-05 10:51:07] 2025-12-05 09:51:07,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-05 10:51:07] 2025-12-05 09:51:07,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-05 10:51:07] 2025-12-05 09:51:07,329 | INFO     | [monitor] control thread has ended
[2025-12-05 10:51:07] 2025-12-05 09:51:07,379 [wrapper] ==== pilot stdout END ====
[2025-12-05 10:51:07] 2025-12-05 09:51:07,382 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-05 10:51:07] 2025-12-05 09:51:07,385 [wrapper] pilotpid: 566043
[2025-12-05 10:51:07] 2025-12-05 09:51:07,388 [wrapper] Pilot exit status: 0
[2025-12-05 10:51:07] 2025-12-05 09:51:07,395 [wrapper] pandaids: 6891558259
[2025-12-05 10:51:07] 2025-12-05 09:51:07,414 [wrapper] cleanup supervisor_pilot  609658 566044
[2025-12-05 10:51:07] 2025-12-05 09:51:07,416 [wrapper] Test setup, not cleaning
[2025-12-05 10:51:07] 2025-12-05 09:51:07,419 [wrapper] apfmon messages muted
[2025-12-05 10:51:07] 2025-12-05 09:51:07,421 [wrapper] ==== wrapper stdout END ====
[2025-12-05 10:51:07] 2025-12-05 09:51:07,424 [wrapper] ==== wrapper stderr END ====
[2025-12-05 10:51:07]  *** Error codes and diagnostics ***
[2025-12-05 10:51:07]     "exeErrorCode": 0,
[2025-12-05 10:51:07]     "exeErrorDiag": "",
[2025-12-05 10:51:07]     "pilotErrorCode": 0,
[2025-12-05 10:51:07]     "pilotErrorDiag": "",
[2025-12-05 10:51:07]  *** Listing of results directory ***
[2025-12-05 10:51:07] total 1302552
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc      5112 Nov 18 16:20 queuedata.json
[2025-12-05 10:51:07] -rwx------ 1 boinc boinc     36292 Nov 18 16:20 runpilot2-wrapper.sh
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc       100 Dec  5 04:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-05 10:51:07] -rwxr-xr-x 1 boinc boinc      7986 Dec  5 04:56 run_atlas
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc       105 Dec  5 04:56 job.xml
[2025-12-05 10:51:07] -rw-r--r-- 2 boinc boinc 411936652 Dec  5 04:56 EVNT.47493065._000047.pool.root.1
[2025-12-05 10:51:07] drwxrwx--x 2 boinc boinc      4096 Dec  5 04:56 shared
[2025-12-05 10:51:07] -rw-r--r-- 2 boinc boinc    590100 Dec  5 04:56 input.tar.gz
[2025-12-05 10:51:07] -rw-r--r-- 2 boinc boinc     15120 Dec  5 04:56 start_atlas.sh
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc         0 Dec  5 04:56 boinc_setup_complete
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc      6444 Dec  5 04:56 init_data.xml
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc         0 Dec  5 04:56 boinc_lockfile
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc      2768 Dec  5 04:56 pandaJob.out
[2025-12-05 10:51:07] -rw------- 1 boinc boinc    985572 Dec  5 04:56 agis_schedconf.cvmfs.json
[2025-12-05 10:51:07] drwx------ 5 boinc boinc      4096 Dec  5 04:56 pilot3
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc       531 Dec  5 10:46 boinc_task_state.xml
[2025-12-05 10:51:07] -rw------- 1 boinc boinc 909571867 Dec  5 10:50 HITS.47493068._000461.pool.root.1
[2025-12-05 10:51:07] -rw------- 1 boinc boinc        95 Dec  5 10:50 pilot_heartbeat.json
[2025-12-05 10:51:07] -rw------- 1 boinc boinc      1024 Dec  5 10:50 memory_monitor_summary.json
[2025-12-05 10:51:07] -rw------- 1 boinc boinc   1516240 Dec  5 10:50 agis_ddmendpoints.agis.ALL.json
[2025-12-05 10:51:07] -rw------- 1 boinc boinc   1203814 Dec  5 10:50 log.47493068._000461.job.log.tgz.1
[2025-12-05 10:51:07] -rw------- 1 boinc boinc      8558 Dec  5 10:50 heartbeat.json
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc      8192 Dec  5 10:51 boinc_mmap_file
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc        28 Dec  5 10:51 wrapper_checkpoint.txt
[2025-12-05 10:51:07] -rw------- 1 boinc boinc       746 Dec  5 10:51 pilotlog.txt
[2025-12-05 10:51:07] -rw------- 1 boinc boinc   3001440 Dec  5 10:51 log.47493068._000461.job.log.1
[2025-12-05 10:51:07] -rw------- 1 boinc boinc       353 Dec  5 10:51 output.list
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc       620 Dec  5 10:51 runtime_log
[2025-12-05 10:51:07] -rw------- 1 boinc boinc   4229120 Dec  5 10:51 result.tar.gz
[2025-12-05 10:51:07] -rw------- 1 boinc boinc       666 Dec  5 10:51 sapNDmYgcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5HFKDmAAkevn.diag
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc      8783 Dec  5 10:51 runtime_log.err
[2025-12-05 10:51:07] -rw-r--r-- 1 boinc boinc      8041 Dec  5 10:51 stderr.txt
[2025-12-05 10:51:07] HITS file was successfully produced:
[2025-12-05 10:51:07] -rw------- 1 boinc boinc 909571867 Dec  5 10:50 shared/HITS.pool.root.1
[2025-12-05 10:51:07]  *** Contents of shared directory: ***
[2025-12-05 10:51:07] total 1295276
[2025-12-05 10:51:07] -rw-r--r-- 2 boinc boinc 411936652 Dec  5 04:56 ATLAS.root_0
[2025-12-05 10:51:07] -rw-r--r-- 2 boinc boinc    590100 Dec  5 04:56 input.tar.gz
[2025-12-05 10:51:07] -rw-r--r-- 2 boinc boinc     15120 Dec  5 04:56 start_atlas.sh
[2025-12-05 10:51:07] -rw------- 1 boinc boinc 909571867 Dec  5 10:50 HITS.pool.root.1
[2025-12-05 10:51:07] -rw------- 1 boinc boinc   4229120 Dec  5 10:51 result.tar.gz
10:51:09 (562250): run_atlas exited; CPU time 83036.304620
10:51:09 (562250): called boinc_finish(0)

</stderr_txt>
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