Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:52:22 (7913): wrapper (7.7.26015): starting
08:52:22 (7913): wrapper: running run_atlas (--nthreads 12)
[2025-12-02 08:52:22] Arguments: --nthreads 12
[2025-12-02 08:52:22] Threads: 12
[2025-12-02 08:52:22] Checking for CVMFS
[2025-12-02 08:52:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 08:52:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 08:52:22] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 08:52:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 08:52:22] 2.11.2.0 2913 296406 96216 153557 2 69 15287208 20275200 1 130560 1 133935275 99.963 17812423 14028 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 08:52:22] CVMFS is ok
[2025-12-02 08:52:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 08:52:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 08:52:22] Further information can be found at the LHC@home message board.
[2025-12-02 08:52:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 08:52:22] Checking for apptainer binary...
[2025-12-02 08:52:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 08:52:22] Running /usr/bin/apptainer --version
[2025-12-02 08:52:22] apptainer version 1.3.2-1.el7
[2025-12-02 08:52:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 08:52:24] c-205-6.aglt2.org
[2025-12-02 08:52:24] apptainer works
[2025-12-02 08:52:24] Set ATHENA_PROC_NUMBER=12
[2025-12-02 08:52:24] Set ATHENA_CORE_NUMBER=12
[2025-12-02 08:52:24] Starting ATLAS job with PandaID=6893852461
[2025-12-02 08:52:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 16:08:27]  *** The last 200 lines of the pilot log: ***
[2025-12-02 16:08:27] 2025-12-02 21:07:26,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 16:08:27] 2025-12-02 21:07:26,436 | INFO     | time since job start (26087s) is within the limit (172800.0s)
[2025-12-02 16:08:27] 2025-12-02 21:07:27,459 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-02 16:08:27] 2025-12-02 21:07:27,464 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-12-02 16:08:27] 2025-12-02 21:07:27,467 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893852461/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 16:08:27] 2025-12-02 21:07:27,469 | INFO     | extracted standard info from prmon json
[2025-12-02 16:08:27] 2025-12-02 21:07:27,469 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 16:08:27] 2025-12-02 21:07:27,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 16:08:27] 2025-12-02 21:07:27,477 | INFO     | fitting pss+swap vs Time
[2025-12-02 16:08:27] 2025-12-02 21:07:27,478 | INFO     | sum of square deviations: 24141395934.86646
[2025-12-02 16:08:27] 2025-12-02 21:07:27,482 | INFO     | sum of deviations: 424524202416.02783
[2025-12-02 16:08:27] 2025-12-02 21:07:27,482 | INFO     | mean x: 1764696581.1943793
[2025-12-02 16:08:27] 2025-12-02 21:07:27,482 | INFO     | mean y: 3437395.011709602
[2025-12-02 16:08:27] 2025-12-02 21:07:27,482 | INFO     | intersect: -31028587872.253723
[2025-12-02 16:08:27] 2025-12-02 21:07:27,483 | INFO     | chi2: 4.807525395773739
[2025-12-02 16:08:27] 2025-12-02 21:07:27,483 | INFO     | sum of square deviations: 23303256697.175335
[2025-12-02 16:08:27] 2025-12-02 21:07:27,487 | INFO     | sum of deviations: 565331790146.3558
[2025-12-02 16:08:27] 2025-12-02 21:07:27,487 | INFO     | mean x: 1764696428.6966825
[2025-12-02 16:08:27] 2025-12-02 21:07:27,487 | INFO     | mean y: 3462976.182464455
[2025-12-02 16:08:27] 2025-12-02 21:07:27,487 | INFO     | intersect: -42807677289.07083
[2025-12-02 16:08:27] 2025-12-02 21:07:27,488 | INFO     | chi2: 2.4718178919849825
[2025-12-02 16:08:27] 2025-12-02 21:07:27,488 | INFO     | current chi2=2.4718178919849825 (change=48.584402816510554 %)
[2025-12-02 16:08:27] 2025-12-02 21:07:27,488 | INFO     | sum of square deviations: 22484745734.479656
[2025-12-02 16:08:27] 2025-12-02 21:07:27,492 | INFO     | sum of deviations: 580429794027.2897
[2025-12-02 16:08:27] 2025-12-02 21:07:27,492 | INFO     | mean x: 1764696276.1990407
[2025-12-02 16:08:27] 2025-12-02 21:07:27,493 | INFO     | mean y: 3465749.2254196643
[2025-12-02 16:08:27] 2025-12-02 21:07:27,493 | INFO     | intersect: -45551076348.3634
[2025-12-02 16:08:27] 2025-12-02 21:07:27,493 | INFO     | chi2: 2.270589958262016
[2025-12-02 16:08:27] 2025-12-02 21:07:27,493 | INFO     | current chi2=2.270589958262016 (change=8.140888306353796 %)
[2025-12-02 16:08:27] 2025-12-02 21:07:27,493 | INFO     | right removable region: 416
[2025-12-02 16:08:27] 2025-12-02 21:07:27,494 | INFO     | sum of square deviations: 23303206067.175346
[2025-12-02 16:08:27] 2025-12-02 21:07:27,498 | INFO     | sum of deviations: 294420636877.3129
[2025-12-02 16:08:27] 2025-12-02 21:07:27,498 | INFO     | mean x: 1764696733.6966825
[2025-12-02 16:08:27] 2025-12-02 21:07:27,498 | INFO     | mean y: 3460981.5805687206
[2025-12-02 16:08:27] 2025-12-02 21:07:27,498 | INFO     | intersect: -22292318179.989063
[2025-12-02 16:08:27] 2025-12-02 21:07:27,498 | INFO     | chi2: 2.685725776231767
[2025-12-02 16:08:27] 2025-12-02 21:07:27,499 | INFO     | current chi2=2.685725776231767 (change=44.13496435000075 %)
[2025-12-02 16:08:27] 2025-12-02 21:07:27,499 | INFO     | sum of square deviations: 22484670093.87534
[2025-12-02 16:08:27] 2025-12-02 21:07:27,503 | INFO     | sum of deviations: 261665196592.64023
[2025-12-02 16:08:27] 2025-12-02 21:07:27,503 | INFO     | mean x: 1764696886.1966426
[2025-12-02 16:08:27] 2025-12-02 21:07:27,503 | INFO     | mean y: 3467077.0287769786
[2025-12-02 16:08:27] 2025-12-02 21:07:27,503 | INFO     | intersect: -20533181035.893482
[2025-12-02 16:08:27] 2025-12-02 21:07:27,504 | INFO     | chi2: 2.63669398182171
[2025-12-02 16:08:27] 2025-12-02 21:07:27,504 | INFO     | current chi2=2.63669398182171 (change=1.8256441087165514 %)
[2025-12-02 16:08:27] 2025-12-02 21:07:27,504 | INFO     | left removable region: 20
[2025-12-02 16:08:27] 2025-12-02 21:07:27,504 | INFO     | sum of square deviations: 19255940091.239788
[2025-12-02 16:08:27] 2025-12-02 21:07:27,508 | INFO     | sum of deviations: 376308235458.64404
[2025-12-02 16:08:27] 2025-12-02 21:07:27,508 | INFO     | mean x: 1764696855.6994948
[2025-12-02 16:08:27] 2025-12-02 21:07:27,508 | INFO     | mean y: 3504337.7196969697
[2025-12-02 16:08:27] 2025-12-02 21:07:27,508 | INFO     | intersect: -34482994723.928474
[2025-12-02 16:08:27] 2025-12-02 21:07:27,508 | INFO     | chi2: 0.06895374301890832
[2025-12-02 16:08:27] 2025-12-02 21:07:27,509 | INFO     | current memory leak: 19.54 B/s (using 396 data points, chi2=0.07)
[2025-12-02 16:08:27] 2025-12-02 21:07:27,509 | INFO     | could have reported an average CPU frequency of 2416 MHz (18 samples)
[2025-12-02 16:08:27] 2025-12-02 21:07:27,509 | INFO     | ..............................
[2025-12-02 16:08:27] 2025-12-02 21:07:27,509 | INFO     | . Timing measurements:
[2025-12-02 16:08:27] 2025-12-02 21:07:27,509 | INFO     | . get job = 0 s
[2025-12-02 16:08:27] 2025-12-02 21:07:27,510 | INFO     | . initial setup = 2 s
[2025-12-02 16:08:27] 2025-12-02 21:07:27,510 | INFO     | . payload setup = 7 s
[2025-12-02 16:08:27] 2025-12-02 21:07:27,510 | INFO     | . stage-in = 0 s
[2025-12-02 16:08:27] 2025-12-02 21:07:27,510 | INFO     | . payload execution = 26050 s
[2025-12-02 16:08:27] 2025-12-02 21:07:27,510 | INFO     | . stage-out = 3 s
[2025-12-02 16:08:27] 2025-12-02 21:07:27,510 | INFO     | . log creation = 0 s
[2025-12-02 16:08:27] 2025-12-02 21:07:27,510 | INFO     | ..............................
[2025-12-02 16:08:27] 2025-12-02 21:07:27,991 | INFO     | 
[2025-12-02 16:08:27] 2025-12-02 21:07:27,991 | INFO     | job summary report
[2025-12-02 16:08:27] 2025-12-02 21:07:27,992 | INFO     | --------------------------------------------------
[2025-12-02 16:08:27] 2025-12-02 21:07:27,992 | INFO     | PanDA job id: 6893852461
[2025-12-02 16:08:27] 2025-12-02 21:07:27,992 | INFO     | task id: 47523449
[2025-12-02 16:08:27] 2025-12-02 21:07:27,992 | INFO     | errors: (none)
[2025-12-02 16:08:27] 2025-12-02 21:07:27,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 16:08:27] 2025-12-02 21:07:27,992 | INFO     | pilot state: finished 
[2025-12-02 16:08:27] 2025-12-02 21:07:27,992 | INFO     | transexitcode: 0
[2025-12-02 16:08:27] 2025-12-02 21:07:27,992 | INFO     | exeerrorcode: 0
[2025-12-02 16:08:27] 2025-12-02 21:07:27,992 | INFO     | exeerrordiag: 
[2025-12-02 16:08:27] 2025-12-02 21:07:27,993 | INFO     | exitcode: 0
[2025-12-02 16:08:27] 2025-12-02 21:07:27,993 | INFO     | exitmsg: OK
[2025-12-02 16:08:27] 2025-12-02 21:07:27,993 | INFO     | cpuconsumptiontime: 299653 s
[2025-12-02 16:08:27] 2025-12-02 21:07:27,993 | INFO     | nevents: 1000
[2025-12-02 16:08:27] 2025-12-02 21:07:27,993 | INFO     | neventsw: 0
[2025-12-02 16:08:27] 2025-12-02 21:07:27,993 | INFO     | pid: 18006
[2025-12-02 16:08:27] 2025-12-02 21:07:27,993 | INFO     | pgrp: 18006
[2025-12-02 16:08:27] 2025-12-02 21:07:27,993 | INFO     | corecount: 12
[2025-12-02 16:08:27] 2025-12-02 21:07:27,993 | INFO     | event service: False
[2025-12-02 16:08:27] 2025-12-02 21:07:27,993 | INFO     | sizes: {0: 2284088, 1: 2284343, 6: 2284605, 12: 2284633, 26061: 2321982, 26062: 2321981, 26066: 2331215, 26073: 2331405}
[2025-12-02 16:08:27] 2025-12-02 21:07:27,994 | INFO     | --------------------------------------------------
[2025-12-02 16:08:27] 2025-12-02 21:07:27,994 | INFO     | 
[2025-12-02 16:08:27] 2025-12-02 21:07:27,994 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-02 16:08:27] 2025-12-02 21:07:28,017 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,018 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,018 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,018 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,019 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,020 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,020 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,020 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,020 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,020 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,020 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,021 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 16:08:27] 2025-12-02 21:07:28,021 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,021 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 16:08:27] 2025-12-02 21:07:28,021 | INFO     | job 6893852461 has completed (purged errors)
[2025-12-02 16:08:27] 2025-12-02 21:07:28,021 | INFO     | overall cleanup function is called
[2025-12-02 16:08:27] 2025-12-02 21:07:29,038 | INFO     | --- collectZombieJob: --- 10, [18006]
[2025-12-02 16:08:27] 2025-12-02 21:07:29,045 | INFO     | zombie collector waiting for pid 18006
[2025-12-02 16:08:27] 2025-12-02 21:07:29,045 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 16:08:27] 2025-12-02 21:07:29,045 | INFO     | collected zombie processes
[2025-12-02 16:08:27] 2025-12-02 21:07:29,045 | INFO     | will attempt to kill all subprocesses of pid=18006
[2025-12-02 16:08:27] 2025-12-02 21:07:29,136 | INFO     | process IDs to be killed: [18006] (in reverse order)
[2025-12-02 16:08:27] 2025-12-02 21:07:29,190 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 16:08:27] 2025-12-02 21:07:29,190 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 16:08:27] 2025-12-02 21:07:29,194 | INFO     | did not find any defunct processes belonging to 18006
[2025-12-02 16:08:27] 2025-12-02 21:07:29,197 | INFO     | did not find any defunct processes belonging to 18006
[2025-12-02 16:08:27] 2025-12-02 21:07:29,200 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 16:08:27] 2025-12-02 21:07:29,200 | INFO     | ready for new job
[2025-12-02 16:08:27] 2025-12-02 21:07:29,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 16:08:27] 2025-12-02 21:07:29,203 | INFO     | ***************************************
[2025-12-02 16:08:27] 2025-12-02 21:07:29,203 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 16:08:27] 2025-12-02 21:07:29,203 | INFO     | ***************************************
[2025-12-02 16:08:27] 2025-12-02 21:07:29,203 | INFO     | 
[2025-12-02 16:08:27] 2025-12-02 21:07:29,204 | INFO     | architecture information:
[2025-12-02 16:08:27] 2025-12-02 21:07:29,204 | INFO     | executing command: cat /etc/os-release
[2025-12-02 16:08:27] 2025-12-02 21:07:29,220 | INFO     | cat /etc/os-release:
[2025-12-02 16:08:27] NAME="CentOS Linux"
[2025-12-02 16:08:27] VERSION="7 (Core)"
[2025-12-02 16:08:27] ID="centos"
[2025-12-02 16:08:27] ID_LIKE="rhel fedora"
[2025-12-02 16:08:27] VERSION_ID="7"
[2025-12-02 16:08:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 16:08:27] ANSI_COLOR="0;31"
[2025-12-02 16:08:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 16:08:27] HOME_URL="https://www.centos.org/"
[2025-12-02 16:08:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 16:08:27] 
[2025-12-02 16:08:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 16:08:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 16:08:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 16:08:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 16:08:27] 
[2025-12-02 16:08:27] 2025-12-02 21:07:29,220 | INFO     | ***************************************
[2025-12-02 16:08:27] 2025-12-02 21:07:29,723 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-02 16:08:27] 2025-12-02 21:07:29,741 | INFO     | sufficient remaining disk space (28232908800 B)
[2025-12-02 16:08:27] 2025-12-02 21:07:29,742 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 16:08:27] 2025-12-02 21:07:29,742 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 16:08:27] 2025-12-02 21:07:29,742 | INFO     | update_server=False
[2025-12-02 16:08:27] 2025-12-02 21:07:29,742 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 16:08:27] 2025-12-02 21:07:29,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 16:08:27] 2025-12-02 21:07:29,743 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 16:08:27] 2025-12-02 21:07:29,743 | INFO     | aborting loop
[2025-12-02 16:08:27] 2025-12-02 21:07:30,552 | INFO     | all data control threads have been joined
[2025-12-02 16:08:27] 2025-12-02 21:07:30,745 | INFO     | [job] job monitor thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:30,748 | INFO     | [job] retrieve thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:30,788 | INFO     | all job control threads have been joined
[2025-12-02 16:08:27] 2025-12-02 21:07:30,915 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:31,110 | INFO     | all payload control threads have been joined
[2025-12-02 16:08:27] 2025-12-02 21:07:31,258 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:31,446 | INFO     | [data] copytool_in thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:31,558 | INFO     | [data] control thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:31,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 16:08:27] 2025-12-02 21:07:31,749 | INFO     | [data] copytool_out thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:31,793 | INFO     | [job] control thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:31,925 | INFO     | [payload] validate_post thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:31,959 | INFO     | [job] validate thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:31,965 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:32,115 | INFO     | [payload] control thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:32,164 | INFO     | [payload] failed_post thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:32,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 16:08:27] 2025-12-02 21:07:33,613 | INFO     | [job] queue monitor thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:35,746 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:38,232 [wrapper] supervise_pilot (15 min periods counter: 30)
[2025-12-02 16:08:27] 2025-12-02 21:07:40,020 | INFO     | job.realtimelogging is not enabled
[2025-12-02 16:08:27] 2025-12-02 21:07:41,025 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 16:08:27] 2025-12-02 21:07:59,639 | INFO     | PID=11584 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-02 16:08:27] 2025-12-02 21:07:59,639 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 16:08:27] 2025-12-02 21:07:59,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 16:08:27] 2025-12-02 21:07:59,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 16:08:27] 2025-12-02 21:08:21,506 | INFO     | [monitor] cgroup control has ended
[2025-12-02 16:08:27] 2025-12-02 21:08:22,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139652899936064)>', '<ExcThread(monitor, started 139652296058624)>']
[2025-12-02 16:08:27] 2025-12-02 21:08:22,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 16:08:27] 2025-12-02 21:08:22,751 | INFO     | [monitor] control thread has ended
[2025-12-02 16:08:27] 2025-12-02 21:08:27,064 | INFO     | all workflow threads have been joined
[2025-12-02 16:08:27] 2025-12-02 21:08:27,071 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 16:08:27] 2025-12-02 21:08:27,071 | INFO     | traces error code: 0
[2025-12-02 16:08:27] 2025-12-02 21:08:27,072 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 16:08:27] 2025-12-02 21:08:27,170 [wrapper] ==== pilot stdout END ====
[2025-12-02 16:08:27] 2025-12-02 21:08:27,174 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 16:08:27] 2025-12-02 21:08:27,177 [wrapper] pilotpid: 11584
[2025-12-02 16:08:27] 2025-12-02 21:08:27,181 [wrapper] Pilot exit status: 0
[2025-12-02 16:08:27] 2025-12-02 21:08:27,195 [wrapper] pandaids: 6893852461
[2025-12-02 16:08:27] 2025-12-02 21:08:27,242 [wrapper] cleanup supervisor_pilot  3138 11585
[2025-12-02 16:08:27] 2025-12-02 21:08:27,246 [wrapper] Test setup, not cleaning
[2025-12-02 16:08:27] 2025-12-02 21:08:27,250 [wrapper] apfmon messages muted
[2025-12-02 16:08:27] 2025-12-02 21:08:27,254 [wrapper] ==== wrapper stdout END ====
[2025-12-02 16:08:27] 2025-12-02 21:08:27,258 [wrapper] ==== wrapper stderr END ====
[2025-12-02 16:08:27]  *** Error codes and diagnostics ***
[2025-12-02 16:08:27]     "exeErrorCode": 0,
[2025-12-02 16:08:27]     "exeErrorDiag": "",
[2025-12-02 16:08:27]     "pilotErrorCode": 0,
[2025-12-02 16:08:27]     "pilotErrorDiag": "",
[2025-12-02 16:08:27]  *** Listing of results directory ***
[2025-12-02 16:08:27] total 1322132
[2025-12-02 16:08:27] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 06:54 pilot3.tar.gz
[2025-12-02 16:08:27] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 06:58 queuedata.json
[2025-12-02 16:08:27] -rwx------ 1 boincer umatlas     36292 Nov 20 06:59 runpilot2-wrapper.sh
[2025-12-02 16:08:27] -rw-r--r-- 1 boincer umatlas       100 Dec  2 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 16:08:27] -rwxr-xr-x 1 boincer umatlas      7986 Dec  2 08:52 run_atlas
[2025-12-02 16:08:27] -rw-r--r-- 1 boincer umatlas       105 Dec  2 08:52 job.xml
[2025-12-02 16:08:27] -rw-r--r-- 2 boincer umatlas 411839775 Dec  2 08:52 EVNT.47493127._000384.pool.root.1
[2025-12-02 16:08:27] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 08:52 start_atlas.sh
[2025-12-02 16:08:27] drwxrwx--x 2 boincer umatlas      4096 Dec  2 08:52 shared
[2025-12-02 16:08:27] -rw-r--r-- 2 boincer umatlas    590105 Dec  2 08:52 input.tar.gz
[2025-12-02 16:08:27] -rw-r--r-- 1 boincer umatlas         0 Dec  2 08:52 boinc_lockfile
[2025-12-02 16:08:27] -rw-r--r-- 1 boincer umatlas      2786 Dec  2 08:52 pandaJob.out
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas        57 Dec  2 08:52 setup.sh.local
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas    987484 Dec  2 08:52 agis_schedconf.cvmfs.json
[2025-12-02 16:08:27] drwx------ 5 boincer umatlas      4096 Dec  2 08:52 pilot3
[2025-12-02 16:08:27] -rw-r--r-- 1 boincer umatlas       533 Dec  2 15:59 boinc_task_state.xml
[2025-12-02 16:08:27] -rw-r--r-- 1 boincer umatlas      5955 Dec  2 16:03 init_data.xml
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas 926473631 Dec  2 16:06 HITS.47523449._003837.pool.root.1
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas      1064 Dec  2 16:07 memory_monitor_summary.json
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas   1516240 Dec  2 16:07 agis_ddmendpoints.agis.ALL.json
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas   2169866 Dec  2 16:07 log.47523449._003837.job.log.tgz.1
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas      8664 Dec  2 16:07 heartbeat.json
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas        95 Dec  2 16:07 pilot_heartbeat.json
[2025-12-02 16:08:27] -rw-r--r-- 1 boincer umatlas        29 Dec  2 16:08 wrapper_checkpoint.txt
[2025-12-02 16:08:27] -rw-r--r-- 1 boincer umatlas      8192 Dec  2 16:08 boinc_mmap_file
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas      4818 Dec  2 16:08 pilotlog.txt
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas   3649557 Dec  2 16:08 log.47523449._003837.job.log.1
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas       353 Dec  2 16:08 output.list
[2025-12-02 16:08:27] -rw-r--r-- 1 boincer umatlas       620 Dec  2 16:08 runtime_log
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas   5836800 Dec  2 16:08 result.tar.gz
[2025-12-02 16:08:27] -rw-r--r-- 1 boincer umatlas      9340 Dec  2 16:08 runtime_log.err
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas       669 Dec  2 16:08 K76MDmqUIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMhHKDm64pyJn.diag
[2025-12-02 16:08:27] -rw-r--r-- 1 boincer umatlas     21289 Dec  2 16:08 stderr.txt
[2025-12-02 16:08:27] HITS file was successfully produced:
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas 926473631 Dec  2 16:06 shared/HITS.pool.root.1
[2025-12-02 16:08:27]  *** Contents of shared directory: ***
[2025-12-02 16:08:27] total 1313248
[2025-12-02 16:08:27] -rw-r--r-- 2 boincer umatlas 411839775 Dec  2 08:52 ATLAS.root_0
[2025-12-02 16:08:27] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 08:52 start_atlas.sh
[2025-12-02 16:08:27] -rw-r--r-- 2 boincer umatlas    590105 Dec  2 08:52 input.tar.gz
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas 926473631 Dec  2 16:06 HITS.pool.root.1
[2025-12-02 16:08:27] -rw------- 1 boincer umatlas   5836800 Dec  2 16:08 result.tar.gz
16:08:28 (7913): run_atlas exited; CPU time 292884.497750
16:08:28 (7913): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN