Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:16:17 (26969): wrapper (7.7.26015): starting
18:16:17 (26969): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 18:16:17] Arguments: --nthreads 8
[2025-12-02 18:16:17] Threads: 8
[2025-12-02 18:16:17] Checking for CVMFS
[2025-12-02 18:16:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 18:16:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 18:16:18] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 18:16:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 18:16:18] 2.11.0.0 4300 74213 96288 153564 3 6 2461740 4096000 4561 130560 1 8145356 99.714 4284150 462 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-12-02 18:16:18] CVMFS is ok
[2025-12-02 18:16:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 18:16:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 18:16:18] Further information can be found at the LHC@home message board.
[2025-12-02 18:16:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 18:16:18] Checking for apptainer binary...
[2025-12-02 18:16:18] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-12-02 18:16:18] apptainer is not installed, using version from CVMFS
[2025-12-02 18:16:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 18:16:19] WARNING: Environment variable TMPDIR already has value [/tmp/job_10944654/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node046
[2025-12-02 18:16:19] apptainer works
[2025-12-02 18:16:19] Set ATHENA_PROC_NUMBER=8
[2025-12-02 18:16:19] Set ATHENA_CORE_NUMBER=8
[2025-12-02 18:16:19] Starting ATLAS job with PandaID=6899792321
[2025-12-02 18:16:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10944654/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 22:44:56]  *** The last 200 lines of the pilot log: ***
[2025-12-02 22:44:56] 2025-12-02 21:43:57,512 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-02 22:44:56] 2025-12-02 21:43:58,381 | INFO     | monitor loop #1171: job 0:6899792321 is in state 'finished'
[2025-12-02 22:44:56] 2025-12-02 21:43:58,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 22:44:56] 2025-12-02 21:43:59,082 | INFO     | time since job start (16055s) is within the limit (172800.0s)
[2025-12-02 22:44:56] 2025-12-02 21:43:59,301 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 22:44:56] 2025-12-02 21:43:59,305 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2599.027734375
[2025-12-02 22:44:56] 2025-12-02 21:43:59,310 | INFO     | using path: /tmp/job_10944654/atlas/pilot/slots/0/PanDA_Pilot-6899792321/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 22:44:56] 2025-12-02 21:43:59,310 | INFO     | extracted standard info from prmon json
[2025-12-02 22:44:56] 2025-12-02 21:43:59,310 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 22:44:56] 2025-12-02 21:43:59,310 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 22:44:56] 2025-12-02 21:43:59,313 | INFO     | fitting pss+swap vs Time
[2025-12-02 22:44:56] 2025-12-02 21:43:59,313 | INFO     | sum of square deviations: 5640782972.0
[2025-12-02 22:44:56] 2025-12-02 21:43:59,314 | INFO     | sum of deviations: 94673185718.0
[2025-12-02 22:44:56] 2025-12-02 21:43:59,314 | INFO     | mean x: 1764703793.0
[2025-12-02 22:44:56] 2025-12-02 21:43:59,314 | INFO     | mean y: 2895580.08365019
[2025-12-02 22:44:56] 2025-12-02 21:43:59,314 | INFO     | intersect: -29615356134.484894
[2025-12-02 22:44:56] 2025-12-02 21:43:59,314 | INFO     | chi2: 2.968863261951444
[2025-12-02 22:44:56] 2025-12-02 21:43:59,315 | INFO     | sum of square deviations: 5325139844.5
[2025-12-02 22:44:56] 2025-12-02 21:43:59,316 | INFO     | sum of deviations: 145756251505.99997
[2025-12-02 22:44:56] 2025-12-02 21:43:59,316 | INFO     | mean x: 1764703640.5
[2025-12-02 22:44:56] 2025-12-02 21:43:59,316 | INFO     | mean y: 2920082.2093023257
[2025-12-02 22:44:56] 2025-12-02 21:43:59,316 | INFO     | intersect: -48299395945.02789
[2025-12-02 22:44:56] 2025-12-02 21:43:59,316 | INFO     | chi2: 1.3559968762452734
[2025-12-02 22:44:56] 2025-12-02 21:43:59,316 | INFO     | current chi2=1.3559968762452734 (change=54.32605827208182 %)
[2025-12-02 22:44:56] 2025-12-02 21:43:59,316 | INFO     | sum of square deviations: 5021496942.0
[2025-12-02 22:44:56] 2025-12-02 21:43:59,317 | INFO     | sum of deviations: 140540276621.00006
[2025-12-02 22:44:56] 2025-12-02 21:43:59,317 | INFO     | mean x: 1764703488.0
[2025-12-02 22:44:56] 2025-12-02 21:43:59,317 | INFO     | mean y: 2917462.209486166
[2025-12-02 22:44:56] 2025-12-02 21:43:59,317 | INFO     | intersect: -49387118860.06368
[2025-12-02 22:44:56] 2025-12-02 21:43:59,317 | INFO     | chi2: 1.3546989031526415
[2025-12-02 22:44:56] 2025-12-02 21:43:59,317 | INFO     | current chi2=1.3546989031526415 (change=0.0957209500530687 %)
[2025-12-02 22:44:56] 2025-12-02 21:43:59,317 | INFO     | right removable region: 252
[2025-12-02 22:44:56] 2025-12-02 21:43:59,318 | INFO     | sum of square deviations: 5325139844.5
[2025-12-02 22:44:56] 2025-12-02 21:43:59,318 | INFO     | sum of deviations: 50170197981.99997
[2025-12-02 22:44:56] 2025-12-02 21:43:59,319 | INFO     | mean x: 1764703945.5
[2025-12-02 22:44:56] 2025-12-02 21:43:59,319 | INFO     | mean y: 2916889.4573643412
[2025-12-02 22:44:56] 2025-12-02 21:43:59,319 | INFO     | intersect: -16623040157.810465
[2025-12-02 22:44:56] 2025-12-02 21:43:59,319 | INFO     | chi2: 1.6697710039967502
[2025-12-02 22:44:56] 2025-12-02 21:43:59,319 | INFO     | current chi2=1.6697710039967502 (change=43.75722771081064 %)
[2025-12-02 22:44:56] 2025-12-02 21:43:59,319 | INFO     | sum of square deviations: 5021496942.0
[2025-12-02 22:44:56] 2025-12-02 21:43:59,320 | INFO     | sum of deviations: 39738143169.99997
[2025-12-02 22:44:56] 2025-12-02 21:43:59,320 | INFO     | mean x: 1764704098.0
[2025-12-02 22:44:56] 2025-12-02 21:43:59,320 | INFO     | mean y: 2922126.403162055
[2025-12-02 22:44:56] 2025-12-02 21:43:59,320 | INFO     | intersect: -13962248998.65966
[2025-12-02 22:44:56] 2025-12-02 21:43:59,320 | INFO     | chi2: 1.6534323753244677
[2025-12-02 22:44:56] 2025-12-02 21:43:59,320 | INFO     | current chi2=1.6534323753244677 (change=0.9784951728814556 %)
[2025-12-02 22:44:56] 2025-12-02 21:43:59,320 | INFO     | left removable region: 20
[2025-12-02 22:44:56] 2025-12-02 21:43:59,321 | INFO     | sum of square deviations: 3871990738.0
[2025-12-02 22:44:56] 2025-12-02 21:43:59,321 | INFO     | sum of deviations: 68253755494.500015
[2025-12-02 22:44:56] 2025-12-02 21:43:59,321 | INFO     | mean x: 1764704067.5
[2025-12-02 22:44:56] 2025-12-02 21:43:59,321 | INFO     | mean y: 2955425.418103448
[2025-12-02 22:44:56] 2025-12-02 21:43:59,321 | INFO     | intersect: -31104474342.22373
[2025-12-02 22:44:56] 2025-12-02 21:43:59,322 | INFO     | chi2: 0.008949243570096946
[2025-12-02 22:44:56] 2025-12-02 21:43:59,322 | INFO     | current memory leak: 17.63 B/s (using 232 data points, chi2=0.01)
[2025-12-02 22:44:56] 2025-12-02 21:43:59,322 | INFO     | could have reported an average CPU frequency of 3087 MHz (12 samples)
[2025-12-02 22:44:56] 2025-12-02 21:43:59,322 | INFO     | ..............................
[2025-12-02 22:44:56] 2025-12-02 21:43:59,322 | INFO     | . Timing measurements:
[2025-12-02 22:44:56] 2025-12-02 21:43:59,322 | INFO     | . get job = 0 s
[2025-12-02 22:44:56] 2025-12-02 21:43:59,322 | INFO     | . initial setup = 1 s
[2025-12-02 22:44:56] 2025-12-02 21:43:59,322 | INFO     | . payload setup = 2 s
[2025-12-02 22:44:56] 2025-12-02 21:43:59,322 | INFO     | . stage-in = 0 s
[2025-12-02 22:44:56] 2025-12-02 21:43:59,322 | INFO     | . payload execution = 16029 s
[2025-12-02 22:44:56] 2025-12-02 21:43:59,322 | INFO     | . stage-out = 1 s
[2025-12-02 22:44:56] 2025-12-02 21:43:59,322 | INFO     | . log creation = 0 s
[2025-12-02 22:44:56] 2025-12-02 21:43:59,322 | INFO     | ..............................
[2025-12-02 22:44:56] 2025-12-02 21:43:59,370 | INFO     | 
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | job summary report
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | --------------------------------------------------
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | PanDA job id: 6899792321
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | task id: 47556173
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | errors: (none)
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | pilot state: finished 
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | transexitcode: 0
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | exeerrorcode: 0
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | exeerrordiag: 
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | exitcode: 0
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | exitmsg: OK
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | cpuconsumptiontime: 121095 s
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | nevents: 1000
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | neventsw: 0
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | pid: 8040
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | pgrp: 8040
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | corecount: 8
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | event service: False
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | sizes: {0: 2284442, 2: 2284704, 10: 2284732, 16035: 2317092, 16036: 2326116, 16038: 2326172, 16043: 2326546}
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | --------------------------------------------------
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | 
[2025-12-02 22:44:56] 2025-12-02 21:43:59,371 | INFO     | executing command: ls -lF /tmp/job_10944654/atlas/pilot/slots/0
[2025-12-02 22:44:56] 2025-12-02 21:43:59,380 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,380 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,380 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,380 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,380 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,380 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,380 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | job 6899792321 has completed (purged errors)
[2025-12-02 22:44:56] 2025-12-02 21:43:59,381 | INFO     | overall cleanup function is called
[2025-12-02 22:44:56] 2025-12-02 21:44:00,388 | INFO     | --- collectZombieJob: --- 10, [8040]
[2025-12-02 22:44:56] 2025-12-02 21:44:00,388 | INFO     | zombie collector waiting for pid 8040
[2025-12-02 22:44:56] 2025-12-02 21:44:00,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 22:44:56] 2025-12-02 21:44:00,389 | INFO     | collected zombie processes
[2025-12-02 22:44:56] 2025-12-02 21:44:00,389 | INFO     | will attempt to kill all subprocesses of pid=8040
[2025-12-02 22:44:56] 2025-12-02 21:44:00,493 | INFO     | process IDs to be killed: [8040] (in reverse order)
[2025-12-02 22:44:56] 2025-12-02 21:44:00,531 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 22:44:56] 2025-12-02 21:44:00,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 22:44:56] 2025-12-02 21:44:00,535 | INFO     | did not find any defunct processes belonging to 8040
[2025-12-02 22:44:56] 2025-12-02 21:44:00,538 | INFO     | did not find any defunct processes belonging to 8040
[2025-12-02 22:44:56] 2025-12-02 21:44:00,538 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 22:44:56] 2025-12-02 21:44:00,538 | INFO     | ready for new job
[2025-12-02 22:44:56] 2025-12-02 21:44:00,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 22:44:56] 2025-12-02 21:44:00,539 | INFO     | ***************************************
[2025-12-02 22:44:56] 2025-12-02 21:44:00,539 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 22:44:56] 2025-12-02 21:44:00,539 | INFO     | ***************************************
[2025-12-02 22:44:56] 2025-12-02 21:44:00,539 | INFO     | 
[2025-12-02 22:44:56] 2025-12-02 21:44:00,554 | INFO     | architecture information:
[2025-12-02 22:44:56] 2025-12-02 21:44:00,554 | INFO     | executing command: cat /etc/os-release
[2025-12-02 22:44:56] 2025-12-02 21:44:00,560 | INFO     | cat /etc/os-release:
[2025-12-02 22:44:56] NAME="CentOS Linux"
[2025-12-02 22:44:56] VERSION="7 (Core)"
[2025-12-02 22:44:56] ID="centos"
[2025-12-02 22:44:56] ID_LIKE="rhel fedora"
[2025-12-02 22:44:56] VERSION_ID="7"
[2025-12-02 22:44:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 22:44:56] ANSI_COLOR="0;31"
[2025-12-02 22:44:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 22:44:56] HOME_URL="https://www.centos.org/"
[2025-12-02 22:44:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 22:44:56] 
[2025-12-02 22:44:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 22:44:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 22:44:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 22:44:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 22:44:56] 
[2025-12-02 22:44:56] 2025-12-02 21:44:00,560 | INFO     | ***************************************
[2025-12-02 22:44:56] 2025-12-02 21:44:01,063 | INFO     | executing command: df -mP /tmp/job_10944654/atlas/pilot/slots/0
[2025-12-02 22:44:56] 2025-12-02 21:44:01,070 | INFO     | sufficient remaining disk space (220640313344 B)
[2025-12-02 22:44:56] 2025-12-02 21:44:01,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 22:44:56] 2025-12-02 21:44:01,070 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 22:44:56] 2025-12-02 21:44:01,070 | INFO     | update_server=False
[2025-12-02 22:44:56] 2025-12-02 21:44:01,070 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 22:44:56] 2025-12-02 21:44:01,071 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-02 22:44:56] 2025-12-02 21:44:01,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 22:44:56] 2025-12-02 21:44:01,071 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 22:44:56] 2025-12-02 21:44:01,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 22:44:56] 2025-12-02 21:44:01,071 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 22:44:56] 2025-12-02 21:44:01,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 22:44:56] 2025-12-02 21:44:01,071 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 22:44:56] 2025-12-02 21:44:01,211 | INFO     | all payload control threads have been joined
[2025-12-02 22:44:56] 2025-12-02 21:44:01,602 | INFO     | all job control threads have been joined
[2025-12-02 22:44:56] 2025-12-02 21:44:01,768 | INFO     | all data control threads have been joined
[2025-12-02 22:44:56] 2025-12-02 21:44:01,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 22:44:56] 2025-12-02 21:44:01,889 | INFO     | aborting loop
[2025-12-02 22:44:56] 2025-12-02 21:44:02,076 | INFO     | [job] retrieve thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:02,076 | INFO     | [job] queue monitor thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:02,216 | INFO     | [payload] control thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:02,399 | INFO     | [payload] validate_post thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:02,452 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:02,500 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:02,573 | INFO     | [payload] failed_post thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:02,588 | INFO     | [data] copytool_in thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:02,607 | INFO     | [job] control thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:02,773 | INFO     | [data] control thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:02,895 | INFO     | [job] job monitor thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:03,076 | INFO     | [data] copytool_out thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:03,247 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:03,400 | INFO     | [job] validate thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:03,404 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:05,076 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 22:44:56] 2025-12-02 21:44:50,617 | INFO     | [monitor] cgroup control has ended
[2025-12-02 22:44:56] 2025-12-02 21:44:51,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058717952)>']
[2025-12-02 22:44:56] 2025-12-02 21:44:52,328 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 22:44:56] 2025-12-02 21:44:52,328 | INFO     | [monitor] control thread has ended
[2025-12-02 22:44:56] 2025-12-02 21:44:56,485 | INFO     | all workflow threads have been joined
[2025-12-02 22:44:56] 2025-12-02 21:44:56,485 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 22:44:56] 2025-12-02 21:44:56,485 | INFO     | traces error code: 0
[2025-12-02 22:44:56] 2025-12-02 21:44:56,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 22:44:56] 2025-12-02 21:44:56,538 [wrapper] ==== pilot stdout END ====
[2025-12-02 22:44:56] 2025-12-02 21:44:56,540 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 22:44:56] 2025-12-02 21:44:56,541 [wrapper] pilotpid: 31763
[2025-12-02 22:44:56] 2025-12-02 21:44:56,542 [wrapper] Pilot exit status: 0
[2025-12-02 22:44:56] 2025-12-02 21:44:56,546 [wrapper] pandaids: 6899792321
[2025-12-02 22:44:56] 2025-12-02 21:44:56,569 [wrapper] cleanup supervisor_pilot  5354 31764
[2025-12-02 22:44:56] 2025-12-02 21:44:56,570 [wrapper] Test setup, not cleaning
[2025-12-02 22:44:56] 2025-12-02 21:44:56,571 [wrapper] apfmon messages muted
[2025-12-02 22:44:56] 2025-12-02 21:44:56,572 [wrapper] ==== wrapper stdout END ====
[2025-12-02 22:44:56] 2025-12-02 21:44:56,573 [wrapper] ==== wrapper stderr END ====
[2025-12-02 22:44:56]  *** Error codes and diagnostics ***
[2025-12-02 22:44:56]     "exeErrorCode": 0,
[2025-12-02 22:44:56]     "exeErrorDiag": "",
[2025-12-02 22:44:56]     "pilotErrorCode": 0,
[2025-12-02 22:44:56]     "pilotErrorDiag": "",
[2025-12-02 22:44:56]  *** Listing of results directory ***
[2025-12-02 22:44:56] total 1302336
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user    576529 Nov 27 09:46 pilot3.tar.gz
[2025-12-02 22:44:56] -rwx------ 1 mf493845 unix-user     36292 Nov 27 09:49 runpilot2-wrapper.sh
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user      5112 Nov 27 09:53 queuedata.json
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user       100 Dec  2 16:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 22:44:56] -rwxr-xr-x 1 mf493845 unix-user      7986 Dec  2 16:32 run_atlas
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user       105 Dec  2 16:32 job.xml
[2025-12-02 22:44:56] -rw-r--r-- 2 mf493845 unix-user 407969815 Dec  2 18:16 EVNT.47483658._003419.pool.root.1
[2025-12-02 22:44:56] -rw-r--r-- 2 mf493845 unix-user     15847 Dec  2 18:16 start_atlas.sh
[2025-12-02 22:44:56] drwxrwx--x 2 mf493845 unix-user       100 Dec  2 18:16 shared
[2025-12-02 22:44:56] -rw-r--r-- 2 mf493845 unix-user    590108 Dec  2 18:16 input.tar.gz
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user      6389 Dec  2 18:16 init_data.xml
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user         0 Dec  2 18:16 boinc_setup_complete
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user      8192 Dec  2 18:16 boinc_mmap_file
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user         0 Dec  2 18:16 boinc_lockfile
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user      2787 Dec  2 18:16 pandaJob.out
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user    988858 Dec  2 18:16 agis_schedconf.cvmfs.json
[2025-12-02 22:44:56] drwx------ 5 mf493845 unix-user       440 Dec  2 18:16 pilot3
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user        95 Dec  2 22:43 pilot_heartbeat.json
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user 913965662 Dec  2 22:43 HITS.47556173._003755.pool.root.1
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user      1031 Dec  2 22:43 memory_monitor_summary.json
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user   1516240 Dec  2 22:43 agis_ddmendpoints.agis.ALL.json
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user   1563921 Dec  2 22:43 log.47556173._003755.job.log.tgz.1
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user      8575 Dec  2 22:43 heartbeat.json
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user      4566 Dec  2 22:44 pilotlog.txt
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user   2321834 Dec  2 22:44 log.47556173._003755.job.log.1
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user       353 Dec  2 22:44 output.list
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user       620 Dec  2 22:44 runtime_log
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user   3901440 Dec  2 22:44 result.tar.gz
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user      9221 Dec  2 22:44 runtime_log.err
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user       651 Dec  2 22:44 MhvLDmJsmi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLiKKDmv1689m.diag
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user     21752 Dec  2 22:44 stderr.txt
[2025-12-02 22:44:56] HITS file was successfully produced:
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user 913965662 Dec  2 22:43 shared/HITS.pool.root.1
[2025-12-02 22:44:56]  *** Contents of shared directory: ***
[2025-12-02 22:44:56] total 1295368
[2025-12-02 22:44:56] -rw-r--r-- 2 mf493845 unix-user 407969815 Dec  2 18:16 ATLAS.root_0
[2025-12-02 22:44:56] -rw-r--r-- 2 mf493845 unix-user     15847 Dec  2 18:16 start_atlas.sh
[2025-12-02 22:44:56] -rw-r--r-- 2 mf493845 unix-user    590108 Dec  2 18:16 input.tar.gz
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user 913965662 Dec  2 22:43 HITS.pool.root.1
[2025-12-02 22:44:56] -rw------- 1 mf493845 unix-user   3901440 Dec  2 22:44 result.tar.gz
22:44:58 (26969): run_atlas exited; CPU time 121297.052233
22:44:58 (26969): called boinc_finish(0)

</stderr_txt>
]]>

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