Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:01:44 (4141947): wrapper (7.7.26015): starting
09:01:44 (4141947): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 09:01:44] Arguments: --nthreads 8
[2025-12-02 09:01:44] Threads: 8
[2025-12-02 09:01:44] Checking for CVMFS
[2025-12-02 09:01:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 09:01:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 09:01:44] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 09:01:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 09:01:45] 2.13.2.0 6491 45237 243560 153557 3 559 31382904 40960000 24103 16776704 0 197369710 99.571 214183342 40094 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 09:01:45] CVMFS is ok
[2025-12-02 09:01:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 09:01:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 09:01:45] Further information can be found at the LHC@home message board.
[2025-12-02 09:01:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 09:01:45] Checking for apptainer binary...
[2025-12-02 09:01:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 09:01:45] Running /usr/bin/apptainer --version
[2025-12-02 09:01:45] apptainer version 1.4.4-1.el9
[2025-12-02 09:01:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 09:01:45] c-212-20.aglt2.org
[2025-12-02 09:01:45] apptainer works
[2025-12-02 09:01:45] Set ATHENA_PROC_NUMBER=8
[2025-12-02 09:01:45] Set ATHENA_CORE_NUMBER=8
[2025-12-02 09:01:45] Starting ATLAS job with PandaID=6901064000
[2025-12-02 09:01:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 06:16:55]  *** The last 200 lines of the pilot log: ***
[2025-12-03 06:16:55] 2025-12-03 11:16:20,909 | INFO     | sum of square deviations: 608528906488.2517
[2025-12-03 06:16:55] 2025-12-03 11:16:20,941 | INFO     | sum of deviations: 3488356787018.427
[2025-12-03 06:16:55] 2025-12-03 11:16:20,941 | INFO     | mean x: 1764722359.853834
[2025-12-03 06:16:55] 2025-12-03 11:16:20,941 | INFO     | mean y: 2928397.2755591054
[2025-12-03 06:16:55] 2025-12-03 11:16:20,942 | INFO     | intersect: -10113240539.915503
[2025-12-03 06:16:55] 2025-12-03 11:16:20,943 | INFO     | chi2: 8.528523180099972
[2025-12-03 06:16:55] 2025-12-03 11:16:20,944 | INFO     | sum of square deviations: 601267650089.0505
[2025-12-03 06:16:55] 2025-12-03 11:16:20,958 | INFO     | time since job start (76435s) is within the limit (172800.0s)
[2025-12-03 06:16:55] 2025-12-03 11:16:20,975 | INFO     | sum of deviations: 3925228305631.9688
[2025-12-03 06:16:55] 2025-12-03 11:16:20,975 | INFO     | mean x: 1764722207.3592622
[2025-12-03 06:16:55] 2025-12-03 11:16:20,975 | INFO     | mean y: 2937574.3929430633
[2025-12-03 06:16:55] 2025-12-03 11:16:20,975 | INFO     | intersect: -11517618302.641174
[2025-12-03 06:16:55] 2025-12-03 11:16:20,976 | INFO     | chi2: 5.22182884693874
[2025-12-03 06:16:55] 2025-12-03 11:16:20,977 | INFO     | current chi2=5.22182884693874 (change=38.772179700196006 %)
[2025-12-03 06:16:55] 2025-12-03 11:16:20,978 | INFO     | sum of square deviations: 594064394777.2761
[2025-12-03 06:16:55] 2025-12-03 11:16:21,004 | INFO     | sum of deviations: 4246975916043.5977
[2025-12-03 06:16:55] 2025-12-03 11:16:21,005 | INFO     | mean x: 1764722054.8647344
[2025-12-03 06:16:55] 2025-12-03 11:16:21,005 | INFO     | mean y: 2944381.1344605475
[2025-12-03 06:16:55] 2025-12-03 11:16:21,005 | INFO     | intersect: -12613081981.34664
[2025-12-03 06:16:55] 2025-12-03 11:16:21,006 | INFO     | chi2: 3.1895935417617607
[2025-12-03 06:16:55] 2025-12-03 11:16:21,006 | INFO     | current chi2=3.1895935417617607 (change=38.91807573065829 %)
[2025-12-03 06:16:55] 2025-12-03 11:16:21,007 | INFO     | sum of square deviations: 586918832474.1652
[2025-12-03 06:16:55] 2025-12-03 11:16:21,033 | INFO     | sum of deviations: 4233770144730.6533
[2025-12-03 06:16:55] 2025-12-03 11:16:21,033 | INFO     | mean x: 1764721902.3694422
[2025-12-03 06:16:55] 2025-12-03 11:16:21,034 | INFO     | mean y: 2944097.8213419565
[2025-12-03 06:16:55] 2025-12-03 11:16:21,034 | INFO     | intersect: -12726970995.391998
[2025-12-03 06:16:55] 2025-12-03 11:16:21,035 | INFO     | chi2: 3.145290715969795
[2025-12-03 06:16:55] 2025-12-03 11:16:21,035 | INFO     | current chi2=3.145290715969795 (change=1.3889802951975827 %)
[2025-12-03 06:16:55] 2025-12-03 11:16:21,035 | INFO     | right removable region: 1236
[2025-12-03 06:16:55] 2025-12-03 11:16:21,036 | INFO     | sum of square deviations: 601266616139.0514
[2025-12-03 06:16:55] 2025-12-03 11:16:21,064 | INFO     | sum of deviations: 3072332839246.752
[2025-12-03 06:16:55] 2025-12-03 11:16:21,064 | INFO     | mean x: 1764722512.3592622
[2025-12-03 06:16:55] 2025-12-03 11:16:21,064 | INFO     | mean y: 2937128.987169206
[2025-12-03 06:16:55] 2025-12-03 11:16:21,064 | INFO     | intersect: -9014385272.337574
[2025-12-03 06:16:55] 2025-12-03 11:16:21,065 | INFO     | chi2: 5.744627943998208
[2025-12-03 06:16:55] 2025-12-03 11:16:21,065 | INFO     | current chi2=5.744627943998208 (change=32.64217235872168 %)
[2025-12-03 06:16:55] 2025-12-03 11:16:21,066 | INFO     | sum of square deviations: 594062707220.9027
[2025-12-03 06:16:55] 2025-12-03 11:16:21,092 | INFO     | sum of deviations: 2986400558036.9844
[2025-12-03 06:16:55] 2025-12-03 11:16:21,092 | INFO     | mean x: 1764722664.8607085
[2025-12-03 06:16:55] 2025-12-03 11:16:21,093 | INFO     | mean y: 2938947.6819645735
[2025-12-03 06:16:55] 2025-12-03 11:16:21,093 | INFO     | intersect: -8868462483.61646
[2025-12-03 06:16:55] 2025-12-03 11:16:21,094 | INFO     | chi2: 5.707043835793282
[2025-12-03 06:16:55] 2025-12-03 11:16:21,094 | INFO     | current chi2=5.707043835793282 (change=0.6542479090258987 %)
[2025-12-03 06:16:55] 2025-12-03 11:16:21,094 | INFO     | left removable region: 20
[2025-12-03 06:16:55] 2025-12-03 11:16:21,095 | INFO     | sum of square deviations: 557530588081.9873
[2025-12-03 06:16:55] 2025-12-03 11:16:21,121 | INFO     | sum of deviations: 3577899784311.529
[2025-12-03 06:16:55] 2025-12-03 11:16:21,121 | INFO     | mean x: 1764722481.8782895
[2025-12-03 06:16:55] 2025-12-03 11:16:21,121 | INFO     | mean y: 2958014.023848684
[2025-12-03 06:16:55] 2025-12-03 11:16:21,121 | INFO     | intersect: -11321981500.063469
[2025-12-03 06:16:55] 2025-12-03 11:16:21,122 | INFO     | chi2: 0.2538860856397812
[2025-12-03 06:16:55] 2025-12-03 11:16:21,122 | INFO     | current memory leak: 6.42 B/s (using 1216 data points, chi2=0.25)
[2025-12-03 06:16:55] 2025-12-03 11:16:21,124 | INFO     | could have reported an average CPU frequency of 3136 MHz (45 samples)
[2025-12-03 06:16:55] 2025-12-03 11:16:21,124 | INFO     | ..............................
[2025-12-03 06:16:55] 2025-12-03 11:16:21,124 | INFO     | . Timing measurements:
[2025-12-03 06:16:55] 2025-12-03 11:16:21,124 | INFO     | . get job = 0 s
[2025-12-03 06:16:55] 2025-12-03 11:16:21,124 | INFO     | . initial setup = 3 s
[2025-12-03 06:16:55] 2025-12-03 11:16:21,124 | INFO     | . payload setup = 15 s
[2025-12-03 06:16:55] 2025-12-03 11:16:21,124 | INFO     | . stage-in = 0 s
[2025-12-03 06:16:55] 2025-12-03 11:16:21,124 | INFO     | . payload execution = 76367 s
[2025-12-03 06:16:55] 2025-12-03 11:16:21,124 | INFO     | . stage-out = 3 s
[2025-12-03 06:16:55] 2025-12-03 11:16:21,124 | INFO     | . log creation = 0 s
[2025-12-03 06:16:55] 2025-12-03 11:16:21,125 | INFO     | ..............................
[2025-12-03 06:16:55] 2025-12-03 11:16:21,567 | INFO     | 
[2025-12-03 06:16:55] 2025-12-03 11:16:21,567 | INFO     | job summary report
[2025-12-03 06:16:55] 2025-12-03 11:16:21,567 | INFO     | --------------------------------------------------
[2025-12-03 06:16:55] 2025-12-03 11:16:21,567 | INFO     | PanDA job id: 6901064000
[2025-12-03 06:16:55] 2025-12-03 11:16:21,567 | INFO     | task id: 47556185
[2025-12-03 06:16:55] 2025-12-03 11:16:21,567 | INFO     | errors: (none)
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | pilot state: finished 
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | transexitcode: 0
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | exeerrorcode: 0
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | exeerrordiag: 
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | exitcode: 0
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | exitmsg: OK
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | cpuconsumptiontime: 210829 s
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | nevents: 1000
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | neventsw: 0
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | pid: 4160518
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | pgrp: 4160518
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | corecount: 8
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | event service: False
[2025-12-03 06:16:55] 2025-12-03 11:16:21,568 | INFO     | sizes: {0: 2284090, 1: 2284345, 2: 2284345, 12: 2284635, 23: 2284663, 76386: 2345003, 76391: 2353997, 76393: 2354053, 76404: 2354299}
[2025-12-03 06:16:55] 2025-12-03 11:16:21,569 | INFO     | --------------------------------------------------
[2025-12-03 06:16:55] 2025-12-03 11:16:21,569 | INFO     | 
[2025-12-03 06:16:55] 2025-12-03 11:16:21,569 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-03 06:16:55] 2025-12-03 11:16:21,598 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,598 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,598 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,599 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 06:16:55] 2025-12-03 11:16:21,600 | INFO     | job 6901064000 has completed (purged errors)
[2025-12-03 06:16:55] 2025-12-03 11:16:21,600 | INFO     | overall cleanup function is called
[2025-12-03 06:16:55] 2025-12-03 11:16:22,615 | INFO     | --- collectZombieJob: --- 10, [4160518]
[2025-12-03 06:16:55] 2025-12-03 11:16:22,615 | INFO     | zombie collector waiting for pid 4160518
[2025-12-03 06:16:55] 2025-12-03 11:16:22,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 06:16:55] 2025-12-03 11:16:22,615 | INFO     | collected zombie processes
[2025-12-03 06:16:55] 2025-12-03 11:16:22,615 | INFO     | will attempt to kill all subprocesses of pid=4160518
[2025-12-03 06:16:55] 2025-12-03 11:16:23,179 | INFO     | process IDs to be killed: [4160518] (in reverse order)
[2025-12-03 06:16:55] 2025-12-03 11:16:23,347 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 06:16:55] 2025-12-03 11:16:23,348 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 06:16:55] 2025-12-03 11:16:23,379 | INFO     | did not find any defunct processes belonging to 4160518
[2025-12-03 06:16:55] 2025-12-03 11:16:23,397 | INFO     | did not find any defunct processes belonging to 4160518
[2025-12-03 06:16:55] 2025-12-03 11:16:23,399 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 06:16:55] 2025-12-03 11:16:23,399 | INFO     | ready for new job
[2025-12-03 06:16:55] 2025-12-03 11:16:23,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 06:16:55] 2025-12-03 11:16:23,403 | INFO     | ***************************************
[2025-12-03 06:16:55] 2025-12-03 11:16:23,403 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 06:16:55] 2025-12-03 11:16:23,403 | INFO     | ***************************************
[2025-12-03 06:16:55] 2025-12-03 11:16:23,403 | INFO     | 
[2025-12-03 06:16:55] 2025-12-03 11:16:23,408 | INFO     | architecture information:
[2025-12-03 06:16:55] 2025-12-03 11:16:23,409 | INFO     | executing command: cat /etc/os-release
[2025-12-03 06:16:55] 2025-12-03 11:16:23,426 | INFO     | cat /etc/os-release:
[2025-12-03 06:16:55] NAME="CentOS Linux"
[2025-12-03 06:16:55] VERSION="7 (Core)"
[2025-12-03 06:16:55] ID="centos"
[2025-12-03 06:16:55] ID_LIKE="rhel fedora"
[2025-12-03 06:16:55] VERSION_ID="7"
[2025-12-03 06:16:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 06:16:55] ANSI_COLOR="0;31"
[2025-12-03 06:16:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 06:16:55] HOME_URL="https://www.centos.org/"
[2025-12-03 06:16:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 06:16:55] 
[2025-12-03 06:16:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 06:16:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 06:16:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 06:16:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 06:16:55] 
[2025-12-03 06:16:55] 2025-12-03 11:16:23,427 | INFO     | ***************************************
[2025-12-03 06:16:55] 2025-12-03 11:16:23,930 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-03 06:16:55] 2025-12-03 11:16:23,964 | INFO     | sufficient remaining disk space (124332802048 B)
[2025-12-03 06:16:55] 2025-12-03 11:16:23,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 06:16:55] 2025-12-03 11:16:23,964 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 06:16:55] 2025-12-03 11:16:23,964 | INFO     | update_server=False
[2025-12-03 06:16:55] 2025-12-03 11:16:23,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 06:16:55] 2025-12-03 11:16:23,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 06:16:55] 2025-12-03 11:16:23,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 06:16:55] 2025-12-03 11:16:23,965 | INFO     | aborting loop
[2025-12-03 06:16:55] 2025-12-03 11:16:23,990 | INFO     | all data control threads have been joined
[2025-12-03 06:16:55] 2025-12-03 11:16:24,154 | INFO     | all job control threads have been joined
[2025-12-03 06:16:55] 2025-12-03 11:16:24,969 | INFO     | [job] retrieve thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:24,970 | INFO     | [job] job monitor thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:24,996 | INFO     | [data] control thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:25,160 | INFO     | [job] control thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:25,166 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:25,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 06:16:55] 2025-12-03 11:16:25,289 | INFO     | all payload control threads have been joined
[2025-12-03 06:16:55] 2025-12-03 11:16:25,406 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:25,680 | INFO     | [payload] failed_post thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:25,799 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:25,970 | INFO     | [data] copytool_out thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:26,208 | INFO     | [data] copytool_in thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:26,246 | INFO     | [job] validate thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:26,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 06:16:55] 2025-12-03 11:16:26,318 | INFO     | [payload] control thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:26,554 | INFO     | [payload] validate_post thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:27,257 | INFO     | [job] queue monitor thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:29,301 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:34,852 | INFO     | job.realtimelogging is not enabled
[2025-12-03 06:16:55] 2025-12-03 11:16:35,857 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 06:16:55] 2025-12-03 11:16:40,083 | INFO     | [monitor] cgroup control has ended
[2025-12-03 06:16:55] 2025-12-03 11:16:40,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139863428765504)>', '<ExcThread(monitor, started 139862715918080)>']
[2025-12-03 06:16:55] 2025-12-03 11:16:45,656 | INFO     | all workflow threads have been joined
[2025-12-03 06:16:55] 2025-12-03 11:16:45,656 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 06:16:55] 2025-12-03 11:16:45,656 | INFO     | traces error code: 0
[2025-12-03 06:16:55] 2025-12-03 11:16:45,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 06:16:55] 2025-12-03 11:16:54,630 | INFO     | PID=4146263 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 06:16:55] 2025-12-03 11:16:54,630 | INFO     | .. there are 24 such processes running
[2025-12-03 06:16:55] 2025-12-03 11:16:54,631 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 06:16:55] 2025-12-03 11:16:54,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 06:16:55] 2025-12-03 11:16:54,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 06:16:55] 2025-12-03 11:16:54,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 06:16:55] 2025-12-03 11:16:54,631 | CRITICAL | thread 'MainThread' is not alive
[2025-12-03 06:16:55] 2025-12-03 11:16:54,631 | INFO     | [monitor] control thread has ended
[2025-12-03 06:16:55] 2025-12-03 11:16:54,793 [wrapper] ==== pilot stdout END ====
[2025-12-03 06:16:55] 2025-12-03 11:16:54,796 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 06:16:55] 2025-12-03 11:16:54,806 [wrapper] pilotpid: 4146263
[2025-12-03 06:16:55] 2025-12-03 11:16:54,825 [wrapper] Pilot exit status: 0
[2025-12-03 06:16:55] 2025-12-03 11:16:54,883 [wrapper] pandaids: 6901064000
[2025-12-03 06:16:55] 2025-12-03 11:16:55,009 [wrapper] cleanup supervisor_pilot 1549203 4146264
[2025-12-03 06:16:55] 2025-12-03 11:16:55,034 [wrapper] Test setup, not cleaning
[2025-12-03 06:16:55] 2025-12-03 11:16:55,040 [wrapper] apfmon messages muted
[2025-12-03 06:16:55] 2025-12-03 11:16:55,042 [wrapper] ==== wrapper stdout END ====
[2025-12-03 06:16:55] 2025-12-03 11:16:55,045 [wrapper] ==== wrapper stderr END ====
[2025-12-03 06:16:55]  *** Error codes and diagnostics ***
[2025-12-03 06:16:55]     "exeErrorCode": 0,
[2025-12-03 06:16:55]     "exeErrorDiag": "",
[2025-12-03 06:16:55]     "pilotErrorCode": 0,
[2025-12-03 06:16:55]     "pilotErrorDiag": "",
[2025-12-03 06:16:55]  *** Listing of results directory ***
[2025-12-03 06:16:55] total 1337744
[2025-12-03 06:16:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 28 05:28 pilot3.tar.gz
[2025-12-03 06:16:55] -rwx------. 1 boincer umatlas     36292 Nov 28 05:31 runpilot2-wrapper.sh
[2025-12-03 06:16:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 28 05:33 queuedata.json
[2025-12-03 06:16:55] -rw-r--r--. 1 boincer umatlas       100 Dec  2 09:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 06:16:55] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 09:01 run_atlas
[2025-12-03 06:16:55] -rw-r--r--. 1 boincer umatlas       105 Dec  2 09:01 job.xml
[2025-12-03 06:16:55] -rw-r--r--. 2 boincer umatlas 409258302 Dec  2 09:01 EVNT.47483658._004565.pool.root.1
[2025-12-03 06:16:55] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 09:01 start_atlas.sh
[2025-12-03 06:16:55] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 09:01 shared
[2025-12-03 06:16:55] -rw-r--r--. 2 boincer umatlas    590113 Dec  2 09:01 input.tar.gz
[2025-12-03 06:16:55] -rw-r--r--. 1 boincer umatlas         0 Dec  2 09:01 boinc_lockfile
[2025-12-03 06:16:55] -rw-r--r--. 1 boincer umatlas      2788 Dec  2 09:01 pandaJob.out
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas        57 Dec  2 09:01 setup.sh.local
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas    987484 Dec  2 09:02 agis_schedconf.cvmfs.json
[2025-12-03 06:16:55] drwx------. 5 boincer umatlas      4096 Dec  2 09:02 pilot3
[2025-12-03 06:16:55] -rw-r--r--. 1 boincer umatlas       533 Dec  3 06:04 boinc_task_state.xml
[2025-12-03 06:16:55] -rw-r--r--. 1 boincer umatlas      6949 Dec  3 06:11 init_data.xml
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas 932756919 Dec  3 06:15 HITS.47556185._003290.pool.root.1
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas      1063 Dec  3 06:15 memory_monitor_summary.json
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas   1516240 Dec  3 06:16 agis_ddmendpoints.agis.ALL.json
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas   2312356 Dec  3 06:16 log.47556185._003290.job.log.tgz.1
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas      8609 Dec  3 06:16 heartbeat.json
[2025-12-03 06:16:55] -rw-r--r--. 1 boincer umatlas        29 Dec  3 06:16 wrapper_checkpoint.txt
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas        95 Dec  3 06:16 pilot_heartbeat.json
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas       893 Dec  3 06:16 pilotlog.txt
[2025-12-03 06:16:55] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 06:16 boinc_mmap_file
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas   9649781 Dec  3 06:16 log.47556185._003290.job.log.1
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas       353 Dec  3 06:16 output.list
[2025-12-03 06:16:55] -rw-r--r--. 1 boincer umatlas       620 Dec  3 06:16 runtime_log
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas  11980800 Dec  3 06:16 result.tar.gz
[2025-12-03 06:16:55] -rw-r--r--. 1 boincer umatlas      9343 Dec  3 06:16 runtime_log.err
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas       666 Dec  3 06:16 44bMDm9vAj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmLLKDmVyFMDn.diag
[2025-12-03 06:16:55] -rw-r--r--. 1 boincer umatlas     21161 Dec  3 06:16 stderr.txt
[2025-12-03 06:16:55] HITS file was successfully produced:
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas 932756919 Dec  3 06:15 shared/HITS.pool.root.1
[2025-12-03 06:16:55]  *** Contents of shared directory: ***
[2025-12-03 06:16:55] total 1322868
[2025-12-03 06:16:55] -rw-r--r--. 2 boincer umatlas 409258302 Dec  2 09:01 ATLAS.root_0
[2025-12-03 06:16:55] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 09:01 start_atlas.sh
[2025-12-03 06:16:55] -rw-r--r--. 2 boincer umatlas    590113 Dec  2 09:01 input.tar.gz
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas 932756919 Dec  3 06:15 HITS.pool.root.1
[2025-12-03 06:16:55] -rw-------. 1 boincer umatlas  11980800 Dec  3 06:16 result.tar.gz
06:17:16 (4141947): run_atlas exited; CPU time 211624.313039
06:17:16 (4141947): called boinc_finish(0)

</stderr_txt>
]]>

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