Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:00:56 (2742058): wrapper (7.7.26015): starting
14:00:56 (2742058): wrapper: running run_atlas (--nthreads 9)
[2025-12-02 14:00:56] Arguments: --nthreads 9
[2025-12-02 14:00:56] Threads: 9
[2025-12-02 14:00:56] Checking for CVMFS
[2025-12-02 14:00:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 14:00:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 14:00:56] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 14:00:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 14:00:56] 2.13.3.0 4548 2765 90812 153565 1 80 6762944 37030912 1932 16776704 0 3240888 99.769 783949 47688 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 14:00:56] CVMFS is ok
[2025-12-02 14:00:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 14:00:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 14:00:56] Further information can be found at the LHC@home message board.
[2025-12-02 14:00:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 14:00:56] Checking for apptainer binary...
[2025-12-02 14:00:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 14:00:56] Running /usr/bin/apptainer --version
[2025-12-02 14:00:56] apptainer version 1.4.4-1.el9
[2025-12-02 14:00:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 14:00:57] c-205-36.aglt2.org
[2025-12-02 14:00:57] apptainer works
[2025-12-02 14:00:57] Set ATHENA_PROC_NUMBER=9
[2025-12-02 14:00:57] Set ATHENA_CORE_NUMBER=9
[2025-12-02 14:00:57] Starting ATLAS job with PandaID=6893876606
[2025-12-02 14:00:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 22:54:02]  *** The last 200 lines of the pilot log: ***
[2025-12-02 22:54:02] 2025-12-03 03:53:27,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 22:54:02] 2025-12-03 03:53:28,563 | INFO     | time since job start (31941s) is within the limit (172800.0s)
[2025-12-02 22:54:02] 2025-12-03 03:53:28,618 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 22:54:02] 2025-12-03 03:53:28,624 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2693.9109375000003
[2025-12-02 22:54:02] 2025-12-03 03:53:28,631 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6893876606/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 22:54:02] 2025-12-03 03:53:28,632 | INFO     | extracted standard info from prmon json
[2025-12-02 22:54:02] 2025-12-03 03:53:28,632 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 22:54:02] 2025-12-03 03:53:28,632 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 22:54:02] 2025-12-03 03:53:28,637 | INFO     | fitting pss+swap vs Time
[2025-12-02 22:54:02] 2025-12-03 03:53:28,638 | INFO     | sum of square deviations: 44613939480.96942
[2025-12-02 22:54:02] 2025-12-03 03:53:28,642 | INFO     | sum of deviations: 680041270257.6536
[2025-12-02 22:54:02] 2025-12-03 03:53:28,642 | INFO     | mean x: 1764718042.5076337
[2025-12-02 22:54:02] 2025-12-03 03:53:28,642 | INFO     | mean y: 3093075.711832061
[2025-12-02 22:54:02] 2025-12-03 03:53:28,642 | INFO     | intersect: -26896147682.55833
[2025-12-02 22:54:02] 2025-12-03 03:53:28,643 | INFO     | chi2: 6.505990196262464
[2025-12-02 22:54:02] 2025-12-03 03:53:28,643 | INFO     | sum of square deviations: 43348968145.96926
[2025-12-02 22:54:02] 2025-12-03 03:53:28,647 | INFO     | sum of deviations: 880179655830.9658
[2025-12-02 22:54:02] 2025-12-03 03:53:28,647 | INFO     | mean x: 1764717890.007707
[2025-12-02 22:54:02] 2025-12-03 03:53:28,647 | INFO     | mean y: 3117200.50867052
[2025-12-02 22:54:02] 2025-12-03 03:53:28,647 | INFO     | intersect: -35828618859.16869
[2025-12-02 22:54:02] 2025-12-03 03:53:28,648 | INFO     | chi2: 2.941270818098967
[2025-12-02 22:54:02] 2025-12-03 03:53:28,648 | INFO     | current chi2=2.941270818098967 (change=54.79134260318042 %)
[2025-12-02 22:54:02] 2025-12-03 03:53:28,648 | INFO     | sum of square deviations: 42108136798.4691
[2025-12-02 22:54:02] 2025-12-03 03:53:28,652 | INFO     | sum of deviations: 908763011051.331
[2025-12-02 22:54:02] 2025-12-03 03:53:28,652 | INFO     | mean x: 1764717737.507782
[2025-12-02 22:54:02] 2025-12-03 03:53:28,652 | INFO     | mean y: 3120696.1673151753
[2025-12-02 22:54:02] 2025-12-03 03:53:28,652 | INFO     | intersect: -38082397370.53493
[2025-12-02 22:54:02] 2025-12-03 03:53:28,653 | INFO     | chi2: 2.6974433086199805
[2025-12-02 22:54:02] 2025-12-03 03:53:28,653 | INFO     | current chi2=2.6974433086199805 (change=8.289869398581247 %)
[2025-12-02 22:54:02] 2025-12-03 03:53:28,653 | INFO     | right removable region: 513
[2025-12-02 22:54:02] 2025-12-03 03:53:28,653 | INFO     | sum of square deviations: 43348965705.96926
[2025-12-02 22:54:02] 2025-12-03 03:53:28,657 | INFO     | sum of deviations: 506789319175.7553
[2025-12-02 22:54:02] 2025-12-03 03:53:28,657 | INFO     | mean x: 1764718195.007707
[2025-12-02 22:54:02] 2025-12-03 03:53:28,657 | INFO     | mean y: 3113935.811175337
[2025-12-02 22:54:02] 2025-12-03 03:53:28,657 | INFO     | intersect: -20628066486.14456
[2025-12-02 22:54:02] 2025-12-03 03:53:28,658 | INFO     | chi2: 4.072348390708489
[2025-12-02 22:54:02] 2025-12-03 03:53:28,658 | INFO     | current chi2=4.072348390708489 (change=37.4061708078202 %)
[2025-12-02 22:54:02] 2025-12-03 03:53:28,658 | INFO     | sum of square deviations: 42108131918.4691
[2025-12-02 22:54:02] 2025-12-03 03:53:28,662 | INFO     | sum of deviations: 458194318837.26245
[2025-12-02 22:54:02] 2025-12-03 03:53:28,662 | INFO     | mean x: 1764718347.507782
[2025-12-02 22:54:02] 2025-12-03 03:53:28,662 | INFO     | mean y: 3119903.309338521
[2025-12-02 22:54:02] 2025-12-03 03:53:28,663 | INFO     | intersect: -19199439895.39058
[2025-12-02 22:54:02] 2025-12-03 03:53:28,663 | INFO     | chi2: 3.9775204494836007
[2025-12-02 22:54:02] 2025-12-03 03:53:28,663 | INFO     | current chi2=3.9775204494836007 (change=2.3285812540314343 %)
[2025-12-02 22:54:02] 2025-12-03 03:53:28,663 | INFO     | left removable region: 20
[2025-12-02 22:54:02] 2025-12-03 03:53:28,664 | INFO     | sum of square deviations: 37154995571.96764
[2025-12-02 22:54:02] 2025-12-03 03:53:28,667 | INFO     | sum of deviations: 620802874183.1642
[2025-12-02 22:54:02] 2025-12-03 03:53:28,667 | INFO     | mean x: 1764718317.0081136
[2025-12-02 22:54:02] 2025-12-03 03:53:28,667 | INFO     | mean y: 3156586.208924949
[2025-12-02 22:54:02] 2025-12-03 03:53:28,667 | INFO     | intersect: -29482574375.601974
[2025-12-02 22:54:02] 2025-12-03 03:53:28,668 | INFO     | chi2: 0.10416690190854919
[2025-12-02 22:54:02] 2025-12-03 03:53:28,668 | INFO     | current memory leak: 16.71 B/s (using 493 data points, chi2=0.10)
[2025-12-02 22:54:02] 2025-12-03 03:53:28,668 | INFO     | could have reported an average CPU frequency of 2612 MHz (21 samples)
[2025-12-02 22:54:02] 2025-12-03 03:53:28,668 | INFO     | ..............................
[2025-12-02 22:54:02] 2025-12-03 03:53:28,668 | INFO     | . Timing measurements:
[2025-12-02 22:54:02] 2025-12-03 03:53:28,668 | INFO     | . get job = 0 s
[2025-12-02 22:54:02] 2025-12-03 03:53:28,669 | INFO     | . initial setup = 2 s
[2025-12-02 22:54:02] 2025-12-03 03:53:28,669 | INFO     | . payload setup = 5 s
[2025-12-02 22:54:02] 2025-12-03 03:53:28,669 | INFO     | . stage-in = 0 s
[2025-12-02 22:54:02] 2025-12-03 03:53:28,669 | INFO     | . payload execution = 31907 s
[2025-12-02 22:54:02] 2025-12-03 03:53:28,669 | INFO     | . stage-out = 3 s
[2025-12-02 22:54:02] 2025-12-03 03:53:28,669 | INFO     | . log creation = 0 s
[2025-12-02 22:54:02] 2025-12-03 03:53:28,669 | INFO     | ..............................
[2025-12-02 22:54:02] 2025-12-03 03:53:28,907 | INFO     | 
[2025-12-02 22:54:02] 2025-12-03 03:53:28,908 | INFO     | job summary report
[2025-12-02 22:54:02] 2025-12-03 03:53:28,908 | INFO     | --------------------------------------------------
[2025-12-02 22:54:02] 2025-12-03 03:53:28,908 | INFO     | PanDA job id: 6893876606
[2025-12-02 22:54:02] 2025-12-03 03:53:28,908 | INFO     | task id: 47523449
[2025-12-02 22:54:02] 2025-12-03 03:53:28,908 | INFO     | errors: (none)
[2025-12-02 22:54:02] 2025-12-03 03:53:28,908 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 22:54:02] 2025-12-03 03:53:28,908 | INFO     | pilot state: finished 
[2025-12-02 22:54:02] 2025-12-03 03:53:28,909 | INFO     | transexitcode: 0
[2025-12-02 22:54:02] 2025-12-03 03:53:28,909 | INFO     | exeerrorcode: 0
[2025-12-02 22:54:02] 2025-12-03 03:53:28,909 | INFO     | exeerrordiag: 
[2025-12-02 22:54:02] 2025-12-03 03:53:28,909 | INFO     | exitcode: 0
[2025-12-02 22:54:02] 2025-12-03 03:53:28,909 | INFO     | exitmsg: OK
[2025-12-02 22:54:02] 2025-12-03 03:53:28,909 | INFO     | cpuconsumptiontime: 281375 s
[2025-12-02 22:54:02] 2025-12-03 03:53:28,909 | INFO     | nevents: 1000
[2025-12-02 22:54:02] 2025-12-03 03:53:28,909 | INFO     | neventsw: 0
[2025-12-02 22:54:02] 2025-12-03 03:53:28,909 | INFO     | pid: 2753364
[2025-12-02 22:54:02] 2025-12-03 03:53:28,910 | INFO     | pgrp: 2753364
[2025-12-02 22:54:02] 2025-12-03 03:53:28,910 | INFO     | corecount: 9
[2025-12-02 22:54:02] 2025-12-03 03:53:28,910 | INFO     | event service: False
[2025-12-02 22:54:02] 2025-12-03 03:53:28,910 | INFO     | sizes: {0: 2283429, 1: 2284285, 5: 2284547, 12: 2284603, 31916: 2324158, 31921: 2333336, 31927: 2333526}
[2025-12-02 22:54:02] 2025-12-03 03:53:28,910 | INFO     | --------------------------------------------------
[2025-12-02 22:54:02] 2025-12-03 03:53:28,910 | INFO     | 
[2025-12-02 22:54:02] 2025-12-03 03:53:28,910 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-02 22:54:02] 2025-12-03 03:53:28,926 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,927 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,927 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,928 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,929 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 22:54:02] 2025-12-03 03:53:28,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,929 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 22:54:02] 2025-12-03 03:53:28,929 | INFO     | job 6893876606 has completed (purged errors)
[2025-12-02 22:54:02] 2025-12-03 03:53:28,929 | INFO     | overall cleanup function is called
[2025-12-02 22:54:02] 2025-12-03 03:53:29,946 | INFO     | --- collectZombieJob: --- 10, [2753364]
[2025-12-02 22:54:02] 2025-12-03 03:53:29,946 | INFO     | zombie collector waiting for pid 2753364
[2025-12-02 22:54:02] 2025-12-03 03:53:29,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 22:54:02] 2025-12-03 03:53:29,946 | INFO     | collected zombie processes
[2025-12-02 22:54:02] 2025-12-03 03:53:29,947 | INFO     | will attempt to kill all subprocesses of pid=2753364
[2025-12-02 22:54:02] 2025-12-03 03:53:30,143 | INFO     | process IDs to be killed: [2753364] (in reverse order)
[2025-12-02 22:54:02] 2025-12-03 03:53:30,199 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 22:54:02] 2025-12-03 03:53:30,199 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 22:54:02] 2025-12-03 03:53:30,204 | INFO     | did not find any defunct processes belonging to 2753364
[2025-12-02 22:54:02] 2025-12-03 03:53:30,208 | INFO     | did not find any defunct processes belonging to 2753364
[2025-12-02 22:54:02] 2025-12-03 03:53:30,210 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 22:54:02] 2025-12-03 03:53:30,210 | INFO     | ready for new job
[2025-12-02 22:54:02] 2025-12-03 03:53:30,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 22:54:02] 2025-12-03 03:53:30,213 | INFO     | ***************************************
[2025-12-02 22:54:02] 2025-12-03 03:53:30,213 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 22:54:02] 2025-12-03 03:53:30,213 | INFO     | ***************************************
[2025-12-02 22:54:02] 2025-12-03 03:53:30,213 | INFO     | 
[2025-12-02 22:54:02] 2025-12-03 03:53:30,215 | INFO     | architecture information:
[2025-12-02 22:54:02] 2025-12-03 03:53:30,216 | INFO     | executing command: cat /etc/os-release
[2025-12-02 22:54:02] 2025-12-03 03:53:30,228 | INFO     | cat /etc/os-release:
[2025-12-02 22:54:02] NAME="CentOS Linux"
[2025-12-02 22:54:02] VERSION="7 (Core)"
[2025-12-02 22:54:02] ID="centos"
[2025-12-02 22:54:02] ID_LIKE="rhel fedora"
[2025-12-02 22:54:02] VERSION_ID="7"
[2025-12-02 22:54:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 22:54:02] ANSI_COLOR="0;31"
[2025-12-02 22:54:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 22:54:02] HOME_URL="https://www.centos.org/"
[2025-12-02 22:54:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 22:54:02] 
[2025-12-02 22:54:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 22:54:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 22:54:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 22:54:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 22:54:02] 
[2025-12-02 22:54:02] 2025-12-03 03:53:30,229 | INFO     | ***************************************
[2025-12-02 22:54:02] 2025-12-03 03:53:30,732 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-02 22:54:02] 2025-12-03 03:53:30,746 | INFO     | sufficient remaining disk space (38729154560 B)
[2025-12-02 22:54:02] 2025-12-03 03:53:30,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 22:54:02] 2025-12-03 03:53:30,746 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 22:54:02] 2025-12-03 03:53:30,747 | INFO     | update_server=False
[2025-12-02 22:54:02] 2025-12-03 03:53:30,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 22:54:02] 2025-12-03 03:53:30,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 22:54:02] 2025-12-03 03:53:31,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 22:54:02] 2025-12-03 03:53:31,008 | INFO     | aborting loop
[2025-12-02 22:54:02] 2025-12-03 03:53:31,374 | INFO     | all payload control threads have been joined
[2025-12-02 22:54:02] 2025-12-03 03:53:31,374 | INFO     | all data control threads have been joined
[2025-12-02 22:54:02] 2025-12-03 03:53:31,752 | INFO     | [job] retrieve thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:31,895 | INFO     | [payload] validate_post thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:32,013 | INFO     | [job] job monitor thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:32,183 | INFO     | all job control threads have been joined
[2025-12-02 22:54:02] 2025-12-03 03:53:32,379 | INFO     | [payload] control thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:32,380 | INFO     | [data] control thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:32,442 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:32,693 | INFO     | [data] copytool_in thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:32,757 | INFO     | [data] copytool_out thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:32,970 | INFO     | [job] validate thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:33,028 | INFO     | [payload] failed_post thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:33,189 | INFO     | [job] control thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:33,199 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:33,209 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:33,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 22:54:02] 2025-12-03 03:53:33,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 22:54:02] 2025-12-03 03:53:34,738 | INFO     | [job] queue monitor thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:37,611 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:41,309 | INFO     | job.realtimelogging is not enabled
[2025-12-02 22:54:02] 2025-12-03 03:53:42,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 22:54:02] 2025-12-03 03:53:57,227 | INFO     | [monitor] cgroup control has ended
[2025-12-02 22:54:02] 2025-12-03 03:53:57,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341369780032)>', '<ExcThread(monitor, started 140340606531328)>']
[2025-12-02 22:54:02] 2025-12-03 03:54:01,900 | INFO     | PID=2745768 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 22:54:02] 2025-12-03 03:54:01,900 | INFO     | .. there are 3 such processes running
[2025-12-02 22:54:02] 2025-12-03 03:54:01,901 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 22:54:02] 2025-12-03 03:54:01,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 22:54:02] 2025-12-03 03:54:01,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 22:54:02] 2025-12-03 03:54:01,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 22:54:02] 2025-12-03 03:54:01,902 | INFO     | [monitor] control thread has ended
[2025-12-02 22:54:02] 2025-12-03 03:54:02,730 | INFO     | all workflow threads have been joined
[2025-12-02 22:54:02] 2025-12-03 03:54:02,730 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 22:54:02] 2025-12-03 03:54:02,730 | INFO     | traces error code: 0
[2025-12-02 22:54:02] 2025-12-03 03:54:02,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 22:54:02] 2025-12-03 03:54:02,849 [wrapper] ==== pilot stdout END ====
[2025-12-02 22:54:02] 2025-12-03 03:54:02,851 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 22:54:02] 2025-12-03 03:54:02,854 [wrapper] pilotpid: 2745768
[2025-12-02 22:54:02] 2025-12-03 03:54:02,856 [wrapper] Pilot exit status: 0
[2025-12-02 22:54:02] 2025-12-03 03:54:02,864 [wrapper] pandaids: 6893876606
[2025-12-02 22:54:02] 2025-12-03 03:54:02,900 [wrapper] cleanup supervisor_pilot 3259267 2745769
[2025-12-02 22:54:02] 2025-12-03 03:54:02,903 [wrapper] Test setup, not cleaning
[2025-12-02 22:54:02] 2025-12-03 03:54:02,905 [wrapper] apfmon messages muted
[2025-12-02 22:54:02] 2025-12-03 03:54:02,907 [wrapper] ==== wrapper stdout END ====
[2025-12-02 22:54:02] 2025-12-03 03:54:02,910 [wrapper] ==== wrapper stderr END ====
[2025-12-02 22:54:02]  *** Error codes and diagnostics ***
[2025-12-02 22:54:02]     "exeErrorCode": 0,
[2025-12-02 22:54:02]     "exeErrorDiag": "",
[2025-12-02 22:54:02]     "pilotErrorCode": 0,
[2025-12-02 22:54:02]     "pilotErrorDiag": "",
[2025-12-02 22:54:02]  *** Listing of results directory ***
[2025-12-02 22:54:02] total 1323400
[2025-12-02 22:54:02] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 12:21 pilot3.tar.gz
[2025-12-02 22:54:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 12:24 queuedata.json
[2025-12-02 22:54:02] -rwx------. 1 boincer umatlas     36292 Nov 20 12:24 runpilot2-wrapper.sh
[2025-12-02 22:54:02] -rw-r--r--. 1 boincer umatlas       100 Dec  2 14:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 22:54:02] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 14:00 run_atlas
[2025-12-02 22:54:02] -rw-r--r--. 1 boincer umatlas       105 Dec  2 14:00 job.xml
[2025-12-02 22:54:02] -rw-r--r--. 2 boincer umatlas 409164414 Dec  2 14:00 EVNT.47493127._000763.pool.root.1
[2025-12-02 22:54:02] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 14:00 shared
[2025-12-02 22:54:02] -rw-r--r--. 2 boincer umatlas    590101 Dec  2 14:00 input.tar.gz
[2025-12-02 22:54:02] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 14:00 start_atlas.sh
[2025-12-02 22:54:02] -rw-r--r--. 1 boincer umatlas         0 Dec  2 14:00 boinc_lockfile
[2025-12-02 22:54:02] -rw-r--r--. 1 boincer umatlas      2781 Dec  2 14:00 pandaJob.out
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas    988850 Dec  2 14:01 agis_schedconf.cvmfs.json
[2025-12-02 22:54:02] drwx------. 5 boincer umatlas      4096 Dec  2 14:01 pilot3
[2025-12-02 22:54:02] -rw-r--r--. 1 boincer umatlas       533 Dec  2 22:44 boinc_task_state.xml
[2025-12-02 22:54:02] -rw-r--r--. 1 boincer umatlas      6527 Dec  2 22:47 init_data.xml
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas 929131273 Dec  2 22:52 HITS.47523449._007621.pool.root.1
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas      1045 Dec  2 22:53 memory_monitor_summary.json
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas   1516240 Dec  2 22:53 agis_ddmendpoints.agis.ALL.json
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas   1917352 Dec  2 22:53 log.47523449._007621.job.log.tgz.1
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas      8619 Dec  2 22:53 heartbeat.json
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas        95 Dec  2 22:54 pilot_heartbeat.json
[2025-12-02 22:54:02] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 22:54 boinc_mmap_file
[2025-12-02 22:54:02] -rw-r--r--. 1 boincer umatlas        29 Dec  2 22:54 wrapper_checkpoint.txt
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas      4895 Dec  2 22:54 pilotlog.txt
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas   4560324 Dec  2 22:54 log.47523449._007621.job.log.1
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas       353 Dec  2 22:54 output.list
[2025-12-02 22:54:02] -rw-r--r--. 1 boincer umatlas       620 Dec  2 22:54 runtime_log
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas   6492160 Dec  2 22:54 result.tar.gz
[2025-12-02 22:54:02] -rw-r--r--. 1 boincer umatlas      8818 Dec  2 22:54 runtime_log.err
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas       659 Dec  2 22:54 f3EMDmuZNg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPMIKDm6SE2Rm.diag
[2025-12-02 22:54:02] -rw-r--r--. 1 boincer umatlas     21275 Dec  2 22:54 stderr.txt
[2025-12-02 22:54:02] HITS file was successfully produced:
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas 929131273 Dec  2 22:52 shared/HITS.pool.root.1
[2025-12-02 22:54:02]  *** Contents of shared directory: ***
[2025-12-02 22:54:02] total 1313876
[2025-12-02 22:54:02] -rw-r--r--. 2 boincer umatlas 409164414 Dec  2 14:00 ATLAS.root_0
[2025-12-02 22:54:02] -rw-r--r--. 2 boincer umatlas    590101 Dec  2 14:00 input.tar.gz
[2025-12-02 22:54:02] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 14:00 start_atlas.sh
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas 929131273 Dec  2 22:52 HITS.pool.root.1
[2025-12-02 22:54:02] -rw-------. 1 boincer umatlas   6492160 Dec  2 22:54 result.tar.gz
22:54:04 (2742058): run_atlas exited; CPU time 281664.774804
22:54:04 (2742058): called boinc_finish(0)

</stderr_txt>
]]>

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