Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:59:19 (17264): wrapper (7.7.26015): starting
08:59:19 (17264): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 08:59:19] Arguments: --nthreads 8
[2025-12-02 08:59:19] Threads: 8
[2025-12-02 08:59:19] Checking for CVMFS
[2025-12-02 08:59:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 08:59:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 08:59:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 08:59:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 08:59:19] 2.11.2.0 10816 126386 140896 153557 1 102 12264201 18432000 1858 130560 0 92420886 99.976 5301779 28986 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 08:59:19] CVMFS is ok
[2025-12-02 08:59:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 08:59:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 08:59:19] Further information can be found at the LHC@home message board.
[2025-12-02 08:59:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 08:59:19] Checking for apptainer binary...
[2025-12-02 08:59:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 08:59:19] Running /usr/bin/apptainer --version
[2025-12-02 08:59:19] apptainer version 1.3.2-1.el7
[2025-12-02 08:59:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 08:59:20] c-206-11.aglt2.org
[2025-12-02 08:59:20] apptainer works
[2025-12-02 08:59:20] Set ATHENA_PROC_NUMBER=8
[2025-12-02 08:59:20] Set ATHENA_CORE_NUMBER=8
[2025-12-02 08:59:20] Starting ATLAS job with PandaID=6895348450
[2025-12-02 08:59:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 03:19:23]  *** The last 200 lines of the pilot log: ***
[2025-12-03 03:19:23] 2025-12-03 08:18:48,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 03:19:23] 2025-12-03 08:18:49,931 | INFO     | time since job start (65958s) is within the limit (172800.0s)
[2025-12-03 03:19:23] 2025-12-03 08:18:50,781 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-03 03:19:23] 2025-12-03 08:18:50,785 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2117.375
[2025-12-03 03:19:23] 2025-12-03 08:18:50,787 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895348450/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 03:19:23] 2025-12-03 08:18:50,788 | INFO     | extracted standard info from prmon json
[2025-12-03 03:19:23] 2025-12-03 08:18:50,788 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 03:19:23] 2025-12-03 08:18:50,788 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 03:19:23] 2025-12-03 08:18:50,804 | INFO     | fitting pss+swap vs Time
[2025-12-03 03:19:23] 2025-12-03 08:18:50,805 | INFO     | sum of square deviations: 391697277168.9343
[2025-12-03 03:19:23] 2025-12-03 08:18:50,828 | INFO     | sum of deviations: 2235685845478.803
[2025-12-03 03:19:23] 2025-12-03 08:18:50,828 | INFO     | mean x: 1764716936.6336725
[2025-12-03 03:19:23] 2025-12-03 08:18:50,828 | INFO     | mean y: 2859371.994449584
[2025-12-03 03:19:23] 2025-12-03 08:18:50,828 | INFO     | intersect: -10069594296.880642
[2025-12-03 03:19:23] 2025-12-03 08:18:50,829 | INFO     | chi2: 4.46766078229271
[2025-12-03 03:19:23] 2025-12-03 08:18:50,831 | INFO     | sum of square deviations: 386287319536.9168
[2025-12-03 03:19:23] 2025-12-03 08:18:50,854 | INFO     | sum of deviations: 2505057979061.319
[2025-12-03 03:19:23] 2025-12-03 08:18:50,854 | INFO     | mean x: 1764716784.1366172
[2025-12-03 03:19:23] 2025-12-03 08:18:50,854 | INFO     | mean y: 2866959.9842007435
[2025-12-03 03:19:23] 2025-12-03 08:18:50,854 | INFO     | intersect: -11441251542.752163
[2025-12-03 03:19:23] 2025-12-03 08:18:50,855 | INFO     | chi2: 2.5232993620614543
[2025-12-03 03:19:23] 2025-12-03 08:18:50,855 | INFO     | current chi2=2.5232993620614543 (change=43.52079343036985 %)
[2025-12-03 03:19:23] 2025-12-03 08:18:50,856 | INFO     | sum of square deviations: 380927409354.88135
[2025-12-03 03:19:23] 2025-12-03 08:18:50,878 | INFO     | sum of deviations: 2514548050827.644
[2025-12-03 03:19:23] 2025-12-03 08:18:50,879 | INFO     | mean x: 1764716631.639589
[2025-12-03 03:19:23] 2025-12-03 08:18:50,879 | INFO     | mean y: 2867227.1830065357
[2025-12-03 03:19:23] 2025-12-03 08:18:50,879 | INFO     | intersect: -11646241388.727598
[2025-12-03 03:19:23] 2025-12-03 08:18:50,880 | INFO     | chi2: 2.4488149739676754
[2025-12-03 03:19:23] 2025-12-03 08:18:50,880 | INFO     | current chi2=2.4488149739676754 (change=2.9518648961622826 %)
[2025-12-03 03:19:23] 2025-12-03 08:18:50,880 | INFO     | right removable region: 1070
[2025-12-03 03:19:23] 2025-12-03 08:18:50,881 | INFO     | sum of square deviations: 386286901686.917
[2025-12-03 03:19:23] 2025-12-03 08:18:50,904 | INFO     | sum of deviations: 1942389509345.234
[2025-12-03 03:19:23] 2025-12-03 08:18:50,904 | INFO     | mean x: 1764717089.1366172
[2025-12-03 03:19:23] 2025-12-03 08:18:50,904 | INFO     | mean y: 2867630.1412639404
[2025-12-03 03:19:23] 2025-12-03 08:18:50,904 | INFO     | intersect: -8870764755.35289
[2025-12-03 03:19:23] 2025-12-03 08:18:50,905 | INFO     | chi2: 2.286781309235686
[2025-12-03 03:19:23] 2025-12-03 08:18:50,905 | INFO     | current chi2=2.286781309235686 (change=48.814795467480465 %)
[2025-12-03 03:19:23] 2025-12-03 08:18:50,906 | INFO     | sum of square deviations: 380926704561.4357
[2025-12-03 03:19:23] 2025-12-03 08:18:50,929 | INFO     | sum of deviations: 1871395752520.7573
[2025-12-03 03:19:23] 2025-12-03 08:18:50,929 | INFO     | mean x: 1764717241.6377218
[2025-12-03 03:19:23] 2025-12-03 08:18:50,936 | INFO     | mean y: 2869649.6050420166
[2025-12-03 03:19:23] 2025-12-03 08:18:50,936 | INFO     | intersect: -8666736106.187687
[2025-12-03 03:19:23] 2025-12-03 08:18:50,937 | INFO     | chi2: 2.2405384575108283
[2025-12-03 03:19:23] 2025-12-03 08:18:50,937 | INFO     | current chi2=2.2405384575108283 (change=2.022180762895664 %)
[2025-12-03 03:19:23] 2025-12-03 08:18:50,937 | INFO     | left removable region: 20
[2025-12-03 03:19:23] 2025-12-03 08:18:50,938 | INFO     | sum of square deviations: 358955904229.99634
[2025-12-03 03:19:23] 2025-12-03 08:18:50,959 | INFO     | sum of deviations: 2037738173797.6948
[2025-12-03 03:19:23] 2025-12-03 08:18:50,960 | INFO     | mean x: 1764717211.1447618
[2025-12-03 03:19:23] 2025-12-03 08:18:50,960 | INFO     | mean y: 2880739.1533333333
[2025-12-03 03:19:23] 2025-12-03 08:18:50,960 | INFO     | intersect: -10015150959.813728
[2025-12-03 03:19:23] 2025-12-03 08:18:50,961 | INFO     | chi2: 0.1785548116803362
[2025-12-03 03:19:23] 2025-12-03 08:18:50,961 | INFO     | current memory leak: 5.68 B/s (using 1050 data points, chi2=0.18)
[2025-12-03 03:19:23] 2025-12-03 08:18:50,962 | INFO     | could have reported an average CPU frequency of 2586 MHz (40 samples)
[2025-12-03 03:19:23] 2025-12-03 08:18:50,962 | INFO     | ..............................
[2025-12-03 03:19:23] 2025-12-03 08:18:50,962 | INFO     | . Timing measurements:
[2025-12-03 03:19:23] 2025-12-03 08:18:50,962 | INFO     | . get job = 0 s
[2025-12-03 03:19:23] 2025-12-03 08:18:50,962 | INFO     | . initial setup = 2 s
[2025-12-03 03:19:23] 2025-12-03 08:18:50,962 | INFO     | . payload setup = 5 s
[2025-12-03 03:19:23] 2025-12-03 08:18:50,962 | INFO     | . stage-in = 0 s
[2025-12-03 03:19:23] 2025-12-03 08:18:50,963 | INFO     | . payload execution = 65925 s
[2025-12-03 03:19:23] 2025-12-03 08:18:50,963 | INFO     | . stage-out = 3 s
[2025-12-03 03:19:23] 2025-12-03 08:18:50,963 | INFO     | . log creation = 0 s
[2025-12-03 03:19:23] 2025-12-03 08:18:50,963 | INFO     | ..............................
[2025-12-03 03:19:23] 2025-12-03 08:18:51,065 | INFO     | 
[2025-12-03 03:19:23] 2025-12-03 08:18:51,065 | INFO     | job summary report
[2025-12-03 03:19:23] 2025-12-03 08:18:51,065 | INFO     | --------------------------------------------------
[2025-12-03 03:19:23] 2025-12-03 08:18:51,065 | INFO     | PanDA job id: 6895348450
[2025-12-03 03:19:23] 2025-12-03 08:18:51,065 | INFO     | task id: 47556137
[2025-12-03 03:19:23] 2025-12-03 08:18:51,065 | INFO     | errors: (none)
[2025-12-03 03:19:23] 2025-12-03 08:18:51,066 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 03:19:23] 2025-12-03 08:18:51,066 | INFO     | pilot state: finished 
[2025-12-03 03:19:23] 2025-12-03 08:18:51,066 | INFO     | transexitcode: 0
[2025-12-03 03:19:23] 2025-12-03 08:18:51,066 | INFO     | exeerrorcode: 0
[2025-12-03 03:19:23] 2025-12-03 08:18:51,066 | INFO     | exeerrordiag: 
[2025-12-03 03:19:23] 2025-12-03 08:18:51,066 | INFO     | exitcode: 0
[2025-12-03 03:19:23] 2025-12-03 08:18:51,066 | INFO     | exitmsg: OK
[2025-12-03 03:19:23] 2025-12-03 08:18:51,066 | INFO     | cpuconsumptiontime: 509990 s
[2025-12-03 03:19:23] 2025-12-03 08:18:51,066 | INFO     | nevents: 1000
[2025-12-03 03:19:23] 2025-12-03 08:18:51,066 | INFO     | neventsw: 0
[2025-12-03 03:19:23] 2025-12-03 08:18:51,067 | INFO     | pid: 27414
[2025-12-03 03:19:23] 2025-12-03 08:18:51,067 | INFO     | pgrp: 27414
[2025-12-03 03:19:23] 2025-12-03 08:18:51,067 | INFO     | corecount: 8
[2025-12-03 03:19:23] 2025-12-03 08:18:51,067 | INFO     | event service: False
[2025-12-03 03:19:23] 2025-12-03 08:18:51,067 | INFO     | sizes: {0: 2284093, 1: 2284292, 4: 2284554, 12: 2284582, 65934: 2339974, 65939: 2348968, 65940: 2349152, 65944: 2349176}
[2025-12-03 03:19:23] 2025-12-03 08:18:51,067 | INFO     | --------------------------------------------------
[2025-12-03 03:19:23] 2025-12-03 08:18:51,067 | INFO     | 
[2025-12-03 03:19:23] 2025-12-03 08:18:51,067 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-03 03:19:23] 2025-12-03 08:18:51,083 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,083 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,083 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,083 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,084 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,084 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,084 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,084 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,084 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,084 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,084 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,085 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 03:19:23] 2025-12-03 08:18:51,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,085 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 03:19:23] 2025-12-03 08:18:51,085 | INFO     | job 6895348450 has completed (purged errors)
[2025-12-03 03:19:23] 2025-12-03 08:18:51,085 | INFO     | overall cleanup function is called
[2025-12-03 03:19:23] 2025-12-03 08:18:52,097 | INFO     | --- collectZombieJob: --- 10, [27414]
[2025-12-03 03:19:23] 2025-12-03 08:18:52,098 | INFO     | zombie collector waiting for pid 27414
[2025-12-03 03:19:23] 2025-12-03 08:18:52,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 03:19:23] 2025-12-03 08:18:52,098 | INFO     | collected zombie processes
[2025-12-03 03:19:23] 2025-12-03 08:18:52,098 | INFO     | will attempt to kill all subprocesses of pid=27414
[2025-12-03 03:19:23] 2025-12-03 08:18:52,224 | INFO     | process IDs to be killed: [27414] (in reverse order)
[2025-12-03 03:19:23] 2025-12-03 08:18:52,266 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 03:19:23] 2025-12-03 08:18:52,267 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 03:19:23] 2025-12-03 08:18:52,269 | INFO     | did not find any defunct processes belonging to 27414
[2025-12-03 03:19:23] 2025-12-03 08:18:52,271 | INFO     | did not find any defunct processes belonging to 27414
[2025-12-03 03:19:23] 2025-12-03 08:18:52,273 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 03:19:23] 2025-12-03 08:18:52,273 | INFO     | ready for new job
[2025-12-03 03:19:23] 2025-12-03 08:18:52,273 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 03:19:23] 2025-12-03 08:18:52,277 | INFO     | ***************************************
[2025-12-03 03:19:23] 2025-12-03 08:18:52,277 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 03:19:23] 2025-12-03 08:18:52,277 | INFO     | ***************************************
[2025-12-03 03:19:23] 2025-12-03 08:18:52,277 | INFO     | 
[2025-12-03 03:19:23] 2025-12-03 08:18:52,278 | INFO     | architecture information:
[2025-12-03 03:19:23] 2025-12-03 08:18:52,278 | INFO     | executing command: cat /etc/os-release
[2025-12-03 03:19:23] 2025-12-03 08:18:52,290 | INFO     | cat /etc/os-release:
[2025-12-03 03:19:23] NAME="CentOS Linux"
[2025-12-03 03:19:23] VERSION="7 (Core)"
[2025-12-03 03:19:23] ID="centos"
[2025-12-03 03:19:23] ID_LIKE="rhel fedora"
[2025-12-03 03:19:23] VERSION_ID="7"
[2025-12-03 03:19:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 03:19:23] ANSI_COLOR="0;31"
[2025-12-03 03:19:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 03:19:23] HOME_URL="https://www.centos.org/"
[2025-12-03 03:19:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 03:19:23] 
[2025-12-03 03:19:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 03:19:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 03:19:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 03:19:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 03:19:23] 
[2025-12-03 03:19:23] 2025-12-03 08:18:52,290 | INFO     | ***************************************
[2025-12-03 03:19:23] 2025-12-03 08:18:52,793 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-03 03:19:23] 2025-12-03 08:18:52,819 | INFO     | sufficient remaining disk space (26506952704 B)
[2025-12-03 03:19:23] 2025-12-03 08:18:52,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 03:19:23] 2025-12-03 08:18:52,819 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 03:19:23] 2025-12-03 08:18:52,819 | INFO     | update_server=False
[2025-12-03 03:19:23] 2025-12-03 08:18:52,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 03:19:23] 2025-12-03 08:18:52,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 03:19:23] 2025-12-03 08:18:52,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 03:19:23] 2025-12-03 08:18:52,821 | INFO     | aborting loop
[2025-12-03 03:19:23] 2025-12-03 08:18:52,821 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 03:19:23] 2025-12-03 08:18:52,940 | INFO     | all data control threads have been joined
[2025-12-03 03:19:23] 2025-12-03 08:18:53,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 03:19:23] 2025-12-03 08:18:53,441 | INFO     | all job control threads have been joined
[2025-12-03 03:19:23] 2025-12-03 08:18:53,825 | INFO     | [job] retrieve thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:53,826 | INFO     | [job] queue monitor thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:53,826 | INFO     | [job] job monitor thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:53,843 | INFO     | all payload control threads have been joined
[2025-12-03 03:19:23] 2025-12-03 08:18:53,945 | INFO     | [data] control thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:54,185 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:54,271 | INFO     | [payload] failed_post thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:54,337 | INFO     | [data] copytool_in thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:54,338 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:54,349 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:54,447 | INFO     | [job] control thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:54,849 | INFO     | [payload] control thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:55,080 | INFO     | [job] validate thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:55,165 | INFO     | [payload] validate_post thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:55,425 | INFO     | [data] copytool_out thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:18:56,828 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:19:03,100 | INFO     | job.realtimelogging is not enabled
[2025-12-03 03:19:23] 2025-12-03 08:19:04,106 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 03:19:23] 2025-12-03 08:19:17,903 | INFO     | [monitor] cgroup control has ended
[2025-12-03 03:19:23] 2025-12-03 08:19:17,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140419842328384)>', '<ExcThread(monitor, started 140419174225664)>']
[2025-12-03 03:19:23] 2025-12-03 08:19:22,947 | INFO     | all workflow threads have been joined
[2025-12-03 03:19:23] 2025-12-03 08:19:22,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 03:19:23] 2025-12-03 08:19:22,948 | INFO     | traces error code: 0
[2025-12-03 03:19:23] 2025-12-03 08:19:22,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 03:19:23] 2025-12-03 08:19:23,156 | INFO     | PID=20945 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-03 03:19:23] 2025-12-03 08:19:23,156 | INFO     | .. there are 2 such processes running
[2025-12-03 03:19:23] 2025-12-03 08:19:23,156 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 03:19:23] 2025-12-03 08:19:23,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 03:19:23] 2025-12-03 08:19:23,157 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 03:19:23] 2025-12-03 08:19:23,157 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 03:19:23] 2025-12-03 08:19:23,157 | INFO     | [monitor] control thread has ended
[2025-12-03 03:19:23] 2025-12-03 08:19:23,239 [wrapper] ==== pilot stdout END ====
[2025-12-03 03:19:23] 2025-12-03 08:19:23,242 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 03:19:23] 2025-12-03 08:19:23,244 [wrapper] pilotpid: 20945
[2025-12-03 03:19:23] 2025-12-03 08:19:23,246 [wrapper] Pilot exit status: 0
[2025-12-03 03:19:23] 2025-12-03 08:19:23,259 [wrapper] pandaids: 6895348450
[2025-12-03 03:19:23] 2025-12-03 08:19:23,290 [wrapper] cleanup supervisor_pilot 12642 20946
[2025-12-03 03:19:23] 2025-12-03 08:19:23,293 [wrapper] Test setup, not cleaning
[2025-12-03 03:19:23] 2025-12-03 08:19:23,295 [wrapper] apfmon messages muted
[2025-12-03 03:19:23] 2025-12-03 08:19:23,297 [wrapper] ==== wrapper stdout END ====
[2025-12-03 03:19:23] 2025-12-03 08:19:23,300 [wrapper] ==== wrapper stderr END ====
[2025-12-03 03:19:23]  *** Error codes and diagnostics ***
[2025-12-03 03:19:23]     "exeErrorCode": 0,
[2025-12-03 03:19:23]     "exeErrorDiag": "",
[2025-12-03 03:19:23]     "pilotErrorCode": 0,
[2025-12-03 03:19:23]     "pilotErrorDiag": "",
[2025-12-03 03:19:23]  *** Listing of results directory ***
[2025-12-03 03:19:23] total 1307376
[2025-12-03 03:19:23] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 14:25 pilot3.tar.gz
[2025-12-03 03:19:23] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 14:54 queuedata.json
[2025-12-03 03:19:23] -rwx------ 1 boincer umatlas     36292 Nov 22 14:54 runpilot2-wrapper.sh
[2025-12-03 03:19:23] -rw-r--r-- 1 boincer umatlas       100 Dec  2 08:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 03:19:23] -rwxr-xr-x 1 boincer umatlas      7986 Dec  2 08:59 run_atlas
[2025-12-03 03:19:23] -rw-r--r-- 1 boincer umatlas       105 Dec  2 08:59 job.xml
[2025-12-03 03:19:23] -rw-r--r-- 2 boincer umatlas 408766456 Dec  2 08:59 EVNT.47483658._000481.pool.root.1
[2025-12-03 03:19:23] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 08:59 start_atlas.sh
[2025-12-03 03:19:23] drwxrwx--x 2 boincer umatlas      4096 Dec  2 08:59 shared
[2025-12-03 03:19:23] -rw-r--r-- 2 boincer umatlas    590106 Dec  2 08:59 input.tar.gz
[2025-12-03 03:19:23] -rw-r--r-- 1 boincer umatlas         0 Dec  2 08:59 boinc_lockfile
[2025-12-03 03:19:23] -rw-r--r-- 1 boincer umatlas      2785 Dec  2 08:59 pandaJob.out
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas        57 Dec  2 08:59 setup.sh.local
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas    987484 Dec  2 08:59 agis_schedconf.cvmfs.json
[2025-12-03 03:19:23] drwx------ 5 boincer umatlas      4096 Dec  2 08:59 pilot3
[2025-12-03 03:19:23] -rw-r--r-- 1 boincer umatlas       533 Dec  3 03:11 boinc_task_state.xml
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas 903235983 Dec  3 03:18 HITS.47556137._004765.pool.root.1
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas        95 Dec  3 03:18 pilot_heartbeat.json
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas      1065 Dec  3 03:18 memory_monitor_summary.json
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas   1516240 Dec  3 03:18 agis_ddmendpoints.agis.ALL.json
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas   2262179 Dec  3 03:18 log.47556137._004765.job.log.tgz.1
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas      8662 Dec  3 03:18 heartbeat.json
[2025-12-03 03:19:23] -rw-r--r-- 1 boincer umatlas      5954 Dec  3 03:19 init_data.xml
[2025-12-03 03:19:23] -rw-r--r-- 1 boincer umatlas      8192 Dec  3 03:19 boinc_mmap_file
[2025-12-03 03:19:23] -rw-r--r-- 1 boincer umatlas        29 Dec  3 03:19 wrapper_checkpoint.txt
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas       820 Dec  3 03:19 pilotlog.txt
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas   9155628 Dec  3 03:19 log.47556137._004765.job.log.1
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas       353 Dec  3 03:19 output.list
[2025-12-03 03:19:23] -rw-r--r-- 1 boincer umatlas       620 Dec  3 03:19 runtime_log
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas  11438080 Dec  3 03:19 result.tar.gz
[2025-12-03 03:19:23] -rw-r--r-- 1 boincer umatlas      9343 Dec  3 03:19 runtime_log.err
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas       668 Dec  3 03:19 4EsLDmnr8g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMGIKDmDqQ7wm.diag
[2025-12-03 03:19:23] -rw-r--r-- 1 boincer umatlas     21279 Dec  3 03:19 stderr.txt
[2025-12-03 03:19:23] HITS file was successfully produced:
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas 903235983 Dec  3 03:18 shared/HITS.pool.root.1
[2025-12-03 03:19:23]  *** Contents of shared directory: ***
[2025-12-03 03:19:23] total 1293028
[2025-12-03 03:19:23] -rw-r--r-- 2 boincer umatlas 408766456 Dec  2 08:59 ATLAS.root_0
[2025-12-03 03:19:23] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 08:59 start_atlas.sh
[2025-12-03 03:19:23] -rw-r--r-- 2 boincer umatlas    590106 Dec  2 08:59 input.tar.gz
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas 903235983 Dec  3 03:18 HITS.pool.root.1
[2025-12-03 03:19:23] -rw------- 1 boincer umatlas  11438080 Dec  3 03:19 result.tar.gz
03:19:25 (17264): run_atlas exited; CPU time 508784.746564
03:19:25 (17264): called boinc_finish(0)

</stderr_txt>
]]>

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