Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:12:55 (22223): wrapper (7.7.26015): starting
08:12:55 (22223): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 08:12:55] Arguments: --nthreads 8
[2025-12-02 08:12:55] Threads: 8
[2025-12-02 08:12:55] Checking for CVMFS
[2025-12-02 08:12:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 08:12:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 08:12:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 08:12:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 08:12:56] 2.11.2.0 10816 126340 141248 153556 3 81 12255659 18432000 1901 130560 0 92313086 99.976 5299628 28982 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 08:12:56] CVMFS is ok
[2025-12-02 08:12:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 08:12:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 08:12:56] Further information can be found at the LHC@home message board.
[2025-12-02 08:12:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 08:12:56] Checking for apptainer binary...
[2025-12-02 08:12:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 08:12:56] Running /usr/bin/apptainer --version
[2025-12-02 08:12:56] apptainer version 1.3.2-1.el7
[2025-12-02 08:12:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 08:12:56] c-206-11.aglt2.org
[2025-12-02 08:12:56] apptainer works
[2025-12-02 08:12:56] Set ATHENA_PROC_NUMBER=8
[2025-12-02 08:12:56] Set ATHENA_CORE_NUMBER=8
[2025-12-02 08:12:57] Starting ATLAS job with PandaID=6896262542
[2025-12-02 08:12:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 00:54:09]  *** The last 200 lines of the pilot log: ***
[2025-12-03 00:54:09] 2025-12-03 05:53:36,389 | INFO     | time since job start (60027s) is within the limit (172800.0s)
[2025-12-03 00:54:09] 2025-12-03 05:53:36,770 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-03 00:54:09] 2025-12-03 05:53:36,776 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2444.5833333333335
[2025-12-03 00:54:09] 2025-12-03 05:53:36,781 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896262542/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 00:54:09] 2025-12-03 05:53:36,781 | INFO     | extracted standard info from prmon json
[2025-12-03 00:54:09] 2025-12-03 05:53:36,782 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 00:54:09] 2025-12-03 05:53:36,782 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 00:54:09] 2025-12-03 05:53:36,808 | INFO     | fitting pss+swap vs Time
[2025-12-03 00:54:09] 2025-12-03 05:53:36,809 | INFO     | sum of square deviations: 295438232862.633
[2025-12-03 00:54:09] 2025-12-03 05:53:36,843 | INFO     | sum of deviations: 1790976753737.998
[2025-12-03 00:54:09] 2025-12-03 05:53:36,844 | INFO     | mean x: 1764711202.019309
[2025-12-03 00:54:09] 2025-12-03 05:53:36,844 | INFO     | mean y: 3372022.263211382
[2025-12-03 00:54:09] 2025-12-03 05:53:36,844 | INFO     | intersect: -10694487592.091967
[2025-12-03 00:54:09] 2025-12-03 05:53:36,846 | INFO     | chi2: 6.585985271777409
[2025-12-03 00:54:09] 2025-12-03 05:53:36,847 | INFO     | sum of square deviations: 290957634936.2763
[2025-12-03 00:54:09] 2025-12-03 05:53:36,881 | INFO     | sum of deviations: 2155510549964.8499
[2025-12-03 00:54:09] 2025-12-03 05:53:36,891 | INFO     | mean x: 1764711049.5219612
[2025-12-03 00:54:09] 2025-12-03 05:53:36,891 | INFO     | mean y: 3384425.309499489
[2025-12-03 00:54:09] 2025-12-03 05:53:36,891 | INFO     | intersect: -13070179654.619957
[2025-12-03 00:54:09] 2025-12-03 05:53:36,893 | INFO     | chi2: 3.6954770944204807
[2025-12-03 00:54:09] 2025-12-03 05:53:36,893 | INFO     | current chi2=3.6954770944204807 (change=43.88877378368089 %)
[2025-12-03 00:54:09] 2025-12-03 05:53:36,895 | INFO     | sum of square deviations: 286522572747.4085
[2025-12-03 00:54:09] 2025-12-03 05:53:36,929 | INFO     | sum of deviations: 2292508090876.7827
[2025-12-03 00:54:09] 2025-12-03 05:53:36,929 | INFO     | mean x: 1764710897.0246406
[2025-12-03 00:54:09] 2025-12-03 05:53:36,929 | INFO     | mean y: 3389133.300821355
[2025-12-03 00:54:09] 2025-12-03 05:53:36,930 | INFO     | intersect: -14116315191.19556
[2025-12-03 00:54:09] 2025-12-03 05:53:36,931 | INFO     | chi2: 3.183258403852616
[2025-12-03 00:54:09] 2025-12-03 05:53:36,931 | INFO     | current chi2=3.183258403852616 (change=13.860691799205696 %)
[2025-12-03 00:54:09] 2025-12-03 05:53:36,932 | INFO     | right removable region: 973
[2025-12-03 00:54:09] 2025-12-03 05:53:36,933 | INFO     | sum of square deviations: 290957323226.2764
[2025-12-03 00:54:09] 2025-12-03 05:53:36,966 | INFO     | sum of deviations: 1414672487093.3843
[2025-12-03 00:54:09] 2025-12-03 05:53:36,967 | INFO     | mean x: 1764711354.5219612
[2025-12-03 00:54:09] 2025-12-03 05:53:36,967 | INFO     | mean y: 3384820.0286006127
[2025-12-03 00:54:09] 2025-12-03 05:53:36,967 | INFO     | intersect: -8576872151.066806
[2025-12-03 00:54:09] 2025-12-03 05:53:36,968 | INFO     | chi2: 3.724599605503563
[2025-12-03 00:54:09] 2025-12-03 05:53:36,969 | INFO     | current chi2=3.724599605503563 (change=43.446584652042844 %)
[2025-12-03 00:54:09] 2025-12-03 05:53:36,970 | INFO     | sum of square deviations: 286522068643.50275
[2025-12-03 00:54:09] 2025-12-03 05:53:37,002 | INFO     | sum of deviations: 1322698260657.4216
[2025-12-03 00:54:09] 2025-12-03 05:53:37,002 | INFO     | mean x: 1764711507.0225873
[2025-12-03 00:54:09] 2025-12-03 05:53:37,002 | INFO     | mean y: 3387981.9353182754
[2025-12-03 00:54:09] 2025-12-03 05:53:37,003 | INFO     | intersect: -8143212564.234667
[2025-12-03 00:54:09] 2025-12-03 05:53:37,004 | INFO     | chi2: 3.626582103265134
[2025-12-03 00:54:09] 2025-12-03 05:53:37,004 | INFO     | current chi2=3.626582103265134 (change=2.631625211300444 %)
[2025-12-03 00:54:09] 2025-12-03 05:53:37,004 | INFO     | left removable region: 20
[2025-12-03 00:54:09] 2025-12-03 05:53:37,006 | INFO     | sum of square deviations: 268386478003.45554
[2025-12-03 00:54:09] 2025-12-03 05:53:37,037 | INFO     | sum of deviations: 1701741704536.8716
[2025-12-03 00:54:09] 2025-12-03 05:53:37,038 | INFO     | mean x: 1764711476.5288563
[2025-12-03 00:54:09] 2025-12-03 05:53:37,038 | INFO     | mean y: 3410354.422875131
[2025-12-03 00:54:09] 2025-12-03 05:53:37,038 | INFO     | intersect: -11185987630.245079
[2025-12-03 00:54:09] 2025-12-03 05:53:37,039 | INFO     | chi2: 0.11929686488430226
[2025-12-03 00:54:09] 2025-12-03 05:53:37,040 | INFO     | current memory leak: 6.34 B/s (using 953 data points, chi2=0.12)
[2025-12-03 00:54:09] 2025-12-03 05:53:37,041 | INFO     | could have reported an average CPU frequency of 2620 MHz (36 samples)
[2025-12-03 00:54:09] 2025-12-03 05:53:37,041 | INFO     | ..............................
[2025-12-03 00:54:09] 2025-12-03 05:53:37,041 | INFO     | . Timing measurements:
[2025-12-03 00:54:09] 2025-12-03 05:53:37,041 | INFO     | . get job = 0 s
[2025-12-03 00:54:09] 2025-12-03 05:53:37,042 | INFO     | . initial setup = 2 s
[2025-12-03 00:54:09] 2025-12-03 05:53:37,042 | INFO     | . payload setup = 10 s
[2025-12-03 00:54:09] 2025-12-03 05:53:37,042 | INFO     | . stage-in = 0 s
[2025-12-03 00:54:09] 2025-12-03 05:53:37,042 | INFO     | . payload execution = 59989 s
[2025-12-03 00:54:09] 2025-12-03 05:53:37,042 | INFO     | . stage-out = 3 s
[2025-12-03 00:54:09] 2025-12-03 05:53:37,042 | INFO     | . log creation = 0 s
[2025-12-03 00:54:09] 2025-12-03 05:53:37,043 | INFO     | ..............................
[2025-12-03 00:54:09] 2025-12-03 05:53:37,329 | INFO     | 
[2025-12-03 00:54:09] 2025-12-03 05:53:37,329 | INFO     | job summary report
[2025-12-03 00:54:09] 2025-12-03 05:53:37,329 | INFO     | --------------------------------------------------
[2025-12-03 00:54:09] 2025-12-03 05:53:37,329 | INFO     | PanDA job id: 6896262542
[2025-12-03 00:54:09] 2025-12-03 05:53:37,329 | INFO     | task id: 47531058
[2025-12-03 00:54:09] 2025-12-03 05:53:37,330 | INFO     | errors: (none)
[2025-12-03 00:54:09] 2025-12-03 05:53:37,330 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 00:54:09] 2025-12-03 05:53:37,330 | INFO     | pilot state: finished 
[2025-12-03 00:54:09] 2025-12-03 05:53:37,330 | INFO     | transexitcode: 0
[2025-12-03 00:54:09] 2025-12-03 05:53:37,330 | INFO     | exeerrorcode: 0
[2025-12-03 00:54:09] 2025-12-03 05:53:37,330 | INFO     | exeerrordiag: 
[2025-12-03 00:54:09] 2025-12-03 05:53:37,331 | INFO     | exitcode: 0
[2025-12-03 00:54:09] 2025-12-03 05:53:37,331 | INFO     | exitmsg: OK
[2025-12-03 00:54:09] 2025-12-03 05:53:37,331 | INFO     | cpuconsumptiontime: 467772 s
[2025-12-03 00:54:09] 2025-12-03 05:53:37,331 | INFO     | nevents: 1000
[2025-12-03 00:54:09] 2025-12-03 05:53:37,331 | INFO     | neventsw: 0
[2025-12-03 00:54:09] 2025-12-03 05:53:37,331 | INFO     | pid: 1883
[2025-12-03 00:54:09] 2025-12-03 05:53:37,332 | INFO     | pgrp: 1883
[2025-12-03 00:54:09] 2025-12-03 05:53:37,332 | INFO     | corecount: 8
[2025-12-03 00:54:09] 2025-12-03 05:53:37,332 | INFO     | event service: False
[2025-12-03 00:54:09] 2025-12-03 05:53:37,332 | INFO     | sizes: {0: 2284450, 1: 2284450, 4: 2284740, 12: 2284768, 60003: 2356177, 60007: 2365171, 60008: 2365355, 60012: 2365629}
[2025-12-03 00:54:09] 2025-12-03 05:53:37,332 | INFO     | --------------------------------------------------
[2025-12-03 00:54:09] 2025-12-03 05:53:37,332 | INFO     | 
[2025-12-03 00:54:09] 2025-12-03 05:53:37,333 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-03 00:54:09] 2025-12-03 05:53:37,354 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,354 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,354 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,354 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 00:54:09] 2025-12-03 05:53:37,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,357 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 00:54:09] 2025-12-03 05:53:37,357 | INFO     | job 6896262542 has completed (purged errors)
[2025-12-03 00:54:09] 2025-12-03 05:53:37,357 | INFO     | overall cleanup function is called
[2025-12-03 00:54:09] 2025-12-03 05:53:38,374 | INFO     | --- collectZombieJob: --- 10, [1883]
[2025-12-03 00:54:09] 2025-12-03 05:53:38,375 | INFO     | zombie collector waiting for pid 1883
[2025-12-03 00:54:09] 2025-12-03 05:53:38,375 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 00:54:09] 2025-12-03 05:53:38,375 | INFO     | collected zombie processes
[2025-12-03 00:54:09] 2025-12-03 05:53:38,375 | INFO     | will attempt to kill all subprocesses of pid=1883
[2025-12-03 00:54:09] 2025-12-03 05:53:38,545 | INFO     | process IDs to be killed: [1883] (in reverse order)
[2025-12-03 00:54:09] 2025-12-03 05:53:38,609 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 00:54:09] 2025-12-03 05:53:38,609 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 00:54:09] 2025-12-03 05:53:38,615 | INFO     | did not find any defunct processes belonging to 1883
[2025-12-03 00:54:09] 2025-12-03 05:53:38,619 | INFO     | did not find any defunct processes belonging to 1883
[2025-12-03 00:54:09] 2025-12-03 05:53:38,621 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 00:54:09] 2025-12-03 05:53:38,622 | INFO     | ready for new job
[2025-12-03 00:54:09] 2025-12-03 05:53:38,622 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 00:54:09] 2025-12-03 05:53:38,627 | INFO     | ***************************************
[2025-12-03 00:54:09] 2025-12-03 05:53:38,627 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 00:54:09] 2025-12-03 05:53:38,627 | INFO     | ***************************************
[2025-12-03 00:54:09] 2025-12-03 05:53:38,627 | INFO     | 
[2025-12-03 00:54:09] 2025-12-03 05:53:38,629 | INFO     | architecture information:
[2025-12-03 00:54:09] 2025-12-03 05:53:38,629 | INFO     | executing command: cat /etc/os-release
[2025-12-03 00:54:09] 2025-12-03 05:53:38,649 | INFO     | cat /etc/os-release:
[2025-12-03 00:54:09] NAME="CentOS Linux"
[2025-12-03 00:54:09] VERSION="7 (Core)"
[2025-12-03 00:54:09] ID="centos"
[2025-12-03 00:54:09] ID_LIKE="rhel fedora"
[2025-12-03 00:54:09] VERSION_ID="7"
[2025-12-03 00:54:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 00:54:09] ANSI_COLOR="0;31"
[2025-12-03 00:54:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 00:54:09] HOME_URL="https://www.centos.org/"
[2025-12-03 00:54:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 00:54:09] 
[2025-12-03 00:54:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 00:54:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 00:54:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 00:54:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 00:54:09] 
[2025-12-03 00:54:09] 2025-12-03 05:53:38,649 | INFO     | ***************************************
[2025-12-03 00:54:09] 2025-12-03 05:53:39,152 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-03 00:54:09] 2025-12-03 05:53:39,168 | INFO     | sufficient remaining disk space (25375539200 B)
[2025-12-03 00:54:09] 2025-12-03 05:53:39,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 00:54:09] 2025-12-03 05:53:39,169 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 00:54:09] 2025-12-03 05:53:39,169 | INFO     | update_server=False
[2025-12-03 00:54:09] 2025-12-03 05:53:39,169 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 00:54:09] 2025-12-03 05:53:39,169 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 00:54:09] 2025-12-03 05:53:39,170 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 00:54:09] 2025-12-03 05:53:39,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 00:54:09] 2025-12-03 05:53:39,170 | INFO     | aborting loop
[2025-12-03 00:54:09] 2025-12-03 05:53:39,188 | INFO     | all data control threads have been joined
[2025-12-03 00:54:09] 2025-12-03 05:53:40,174 | INFO     | [job] retrieve thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:40,174 | INFO     | [job] queue monitor thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:40,175 | INFO     | [job] job monitor thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:40,194 | INFO     | [data] control thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:40,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 00:54:09] 2025-12-03 05:53:40,358 | INFO     | all payload control threads have been joined
[2025-12-03 00:54:09] 2025-12-03 05:53:40,384 | INFO     | all job control threads have been joined
[2025-12-03 00:54:09] 2025-12-03 05:53:40,524 | INFO     | [payload] validate_post thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:40,866 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:40,887 | INFO     | [data] copytool_in thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:40,963 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:41,146 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:41,258 | INFO     | [payload] failed_post thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:41,272 | INFO     | [job] validate thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:41,364 | INFO     | [payload] control thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:41,391 | INFO     | [job] control thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:42,358 | INFO     | [data] copytool_out thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:43,177 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:48,199 | INFO     | [monitor] cgroup control has ended
[2025-12-03 00:54:09] 2025-12-03 05:53:49,411 | INFO     | job.realtimelogging is not enabled
[2025-12-03 00:54:09] 2025-12-03 05:53:50,416 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 00:54:09] 2025-12-03 05:53:50,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352083797824)>', '<ExcThread(monitor, started 140351654315776)>']
[2025-12-03 00:54:09] 2025-12-03 05:53:55,991 | INFO     | all workflow threads have been joined
[2025-12-03 00:54:09] 2025-12-03 05:53:55,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 00:54:09] 2025-12-03 05:53:55,992 | INFO     | traces error code: 0
[2025-12-03 00:54:09] 2025-12-03 05:53:55,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 00:54:09] 2025-12-03 05:54:09,586 | INFO     | PID=26823 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-03 00:54:09] 2025-12-03 05:54:09,595 | INFO     | .. there are 3 such processes running
[2025-12-03 00:54:09] 2025-12-03 05:54:09,595 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 00:54:09] 2025-12-03 05:54:09,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 00:54:09] 2025-12-03 05:54:09,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 00:54:09] 2025-12-03 05:54:09,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 00:54:09] 2025-12-03 05:54:09,596 | CRITICAL | thread 'MainThread' is not alive
[2025-12-03 00:54:09] 2025-12-03 05:54:09,596 | INFO     | [monitor] control thread has ended
[2025-12-03 00:54:09] 2025-12-03 05:54:09,724 [wrapper] ==== pilot stdout END ====
[2025-12-03 00:54:09] 2025-12-03 05:54:09,726 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 00:54:09] 2025-12-03 05:54:09,729 [wrapper] pilotpid: 26823
[2025-12-03 00:54:09] 2025-12-03 05:54:09,732 [wrapper] Pilot exit status: 0
[2025-12-03 00:54:09] 2025-12-03 05:54:09,740 [wrapper] pandaids: 6896262542
[2025-12-03 00:54:09] 2025-12-03 05:54:09,781 [wrapper] cleanup supervisor_pilot 26754 26824
[2025-12-03 00:54:09] 2025-12-03 05:54:09,783 [wrapper] Test setup, not cleaning
[2025-12-03 00:54:09] 2025-12-03 05:54:09,786 [wrapper] apfmon messages muted
[2025-12-03 00:54:09] 2025-12-03 05:54:09,789 [wrapper] ==== wrapper stdout END ====
[2025-12-03 00:54:09] 2025-12-03 05:54:09,791 [wrapper] ==== wrapper stderr END ====
[2025-12-03 00:54:09]  *** Error codes and diagnostics ***
[2025-12-03 00:54:09]     "exeErrorCode": 0,
[2025-12-03 00:54:09]     "exeErrorDiag": "",
[2025-12-03 00:54:09]     "pilotErrorCode": 0,
[2025-12-03 00:54:09]     "pilotErrorDiag": "",
[2025-12-03 00:54:09]  *** Listing of results directory ***
[2025-12-03 00:54:09] total 1073004
[2025-12-03 00:54:09] -rw-r--r-- 1 boincer umatlas    576529 Nov 28 05:28 pilot3.tar.gz
[2025-12-03 00:54:09] -rwx------ 1 boincer umatlas     36292 Nov 28 05:31 runpilot2-wrapper.sh
[2025-12-03 00:54:09] -rw-r--r-- 1 boincer umatlas      5112 Nov 28 05:33 queuedata.json
[2025-12-03 00:54:09] -rw-r--r-- 1 boincer umatlas       100 Dec  2 08:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 00:54:09] -rwxr-xr-x 1 boincer umatlas      7986 Dec  2 08:12 run_atlas
[2025-12-03 00:54:09] -rw-r--r-- 1 boincer umatlas       105 Dec  2 08:12 job.xml
[2025-12-03 00:54:09] -rw-r--r-- 2 boincer umatlas 375306531 Dec  2 08:12 EVNT.47531050._000421.pool.root.1
[2025-12-03 00:54:09] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 08:12 start_atlas.sh
[2025-12-03 00:54:09] drwxrwx--x 2 boincer umatlas      4096 Dec  2 08:12 shared
[2025-12-03 00:54:09] -rw-r--r-- 2 boincer umatlas    590115 Dec  2 08:12 input.tar.gz
[2025-12-03 00:54:09] -rw-r--r-- 1 boincer umatlas         0 Dec  2 08:12 boinc_lockfile
[2025-12-03 00:54:09] -rw-r--r-- 1 boincer umatlas      2879 Dec  2 08:12 pandaJob.out
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas        57 Dec  2 08:12 setup.sh.local
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas    987476 Dec  2 08:13 agis_schedconf.cvmfs.json
[2025-12-03 00:54:09] drwx------ 5 boincer umatlas      4096 Dec  2 08:13 pilot3
[2025-12-03 00:54:09] -rw-r--r-- 1 boincer umatlas       533 Dec  3 00:41 boinc_task_state.xml
[2025-12-03 00:54:09] -rw-r--r-- 1 boincer umatlas      5954 Dec  3 00:47 init_data.xml
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas 698240627 Dec  3 00:53 HITS.47531058._000376.pool.root.1
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas      1067 Dec  3 00:53 memory_monitor_summary.json
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas        95 Dec  3 00:53 pilot_heartbeat.json
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas   1516240 Dec  3 00:53 agis_ddmendpoints.agis.ALL.json
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas   2283372 Dec  3 00:53 log.47531058._000376.job.log.tgz.1
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas     27867 Dec  3 00:53 heartbeat.json
[2025-12-03 00:54:09] -rw-r--r-- 1 boincer umatlas      8192 Dec  3 00:53 boinc_mmap_file
[2025-12-03 00:54:09] -rw-r--r-- 1 boincer umatlas        29 Dec  3 00:53 wrapper_checkpoint.txt
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas       890 Dec  3 00:54 pilotlog.txt
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas   8345134 Dec  3 00:54 log.47531058._000376.job.log.1
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas       353 Dec  3 00:54 output.list
[2025-12-03 00:54:09] -rw-r--r-- 1 boincer umatlas       620 Dec  3 00:54 runtime_log
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas  10670080 Dec  3 00:54 result.tar.gz
[2025-12-03 00:54:09] -rw-r--r-- 1 boincer umatlas      9343 Dec  3 00:54 runtime_log.err
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas       667 Dec  3 00:54 JulLDm9vAj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwaOKDmnPgaQm.diag
[2025-12-03 00:54:09] -rw-r--r-- 1 boincer umatlas     21230 Dec  3 00:54 stderr.txt
[2025-12-03 00:54:09] HITS file was successfully produced:
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas 698240627 Dec  3 00:53 shared/HITS.pool.root.1
[2025-12-03 00:54:09]  *** Contents of shared directory: ***
[2025-12-03 00:54:09] total 1059412
[2025-12-03 00:54:09] -rw-r--r-- 2 boincer umatlas 375306531 Dec  2 08:12 ATLAS.root_0
[2025-12-03 00:54:09] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 08:12 start_atlas.sh
[2025-12-03 00:54:09] -rw-r--r-- 2 boincer umatlas    590115 Dec  2 08:12 input.tar.gz
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas 698240627 Dec  3 00:53 HITS.pool.root.1
[2025-12-03 00:54:09] -rw------- 1 boincer umatlas  10670080 Dec  3 00:54 result.tar.gz
00:54:11 (22223): run_atlas exited; CPU time 467138.730912
00:54:11 (22223): called boinc_finish(0)

</stderr_txt>
]]>

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