Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:11:32 (2368214): wrapper (7.7.26015): starting
08:11:32 (2368214): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 08:11:32] Arguments: --nthreads 8
[2025-12-02 08:11:32] Threads: 8
[2025-12-02 08:11:32] Checking for CVMFS
[2025-12-02 08:11:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 08:11:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 08:11:33] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 08:11:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 08:11:34] 2.13.3.0 11888 38686 378864 153556 1 357 16664673 32935937 33505 16776704 0 203623083 99.518 253579275 35101 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 08:11:34] CVMFS is ok
[2025-12-02 08:11:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 08:11:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 08:11:34] Further information can be found at the LHC@home message board.
[2025-12-02 08:11:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 08:11:34] Checking for apptainer binary...
[2025-12-02 08:11:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 08:11:34] Running /usr/bin/apptainer --version
[2025-12-02 08:11:35] apptainer version 1.4.4-1.el9
[2025-12-02 08:11:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 08:11:35] c6-2-11-3.aglt2.org
[2025-12-02 08:11:35] apptainer works
[2025-12-02 08:11:35] Set ATHENA_PROC_NUMBER=8
[2025-12-02 08:11:35] Set ATHENA_CORE_NUMBER=8
[2025-12-02 08:11:35] Starting ATLAS job with PandaID=6901272986
[2025-12-02 08:11:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 06:04:04]  *** The last 200 lines of the pilot log: ***
[2025-12-03 06:04:04] 2025-12-03 10:45:47,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 06:04:04] 2025-12-03 10:45:48,948 | INFO     | time since job start (77580s) is within the limit (172800.0s)
[2025-12-03 06:04:04] 2025-12-03 10:45:50,051 | INFO     | monitor loop #4097: job 0:6901272986 is in state 'finished'
[2025-12-03 06:04:04] 2025-12-03 10:45:50,051 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 06:04:04] 2025-12-03 10:45:50,960 | INFO     | time since job start (77582s) is within the limit (172800.0s)
[2025-12-03 06:04:04] 2025-12-03 10:45:52,557 | INFO     | monitor loop #4098: job 0:6901272986 is in state 'finished'
[2025-12-03 06:04:04] 2025-12-03 10:45:52,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 06:04:04] 2025-12-03 10:45:52,981 | INFO     | time since job start (77584s) is within the limit (172800.0s)
[2025-12-03 06:04:04] 2025-12-03 10:45:54,989 | INFO     | time since job start (77586s) is within the limit (172800.0s)
[2025-12-03 06:04:04] 2025-12-03 10:45:55,101 | INFO     | monitor loop #4099: job 0:6901272986 is in state 'finished'
[2025-12-03 06:04:04] 2025-12-03 10:45:55,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 06:04:04] 2025-12-03 10:45:56,997 | INFO     | time since job start (77588s) is within the limit (172800.0s)
[2025-12-03 06:04:04] 2025-12-03 10:45:57,606 | INFO     | monitor loop #4100: job 0:6901272986 is in state 'finished'
[2025-12-03 06:04:04] 2025-12-03 10:45:57,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 06:04:04] 2025-12-03 10:45:57,981 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-03 06:04:04] 2025-12-03 10:45:58,058 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2697.8453645833324
[2025-12-03 06:04:04] 2025-12-03 10:45:58,183 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6901272986/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 06:04:04] 2025-12-03 10:45:58,203 | INFO     | extracted standard info from prmon json
[2025-12-03 06:04:04] 2025-12-03 10:45:58,204 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 06:04:04] 2025-12-03 10:45:58,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 06:04:04] 2025-12-03 10:45:58,286 | INFO     | fitting pss+swap vs Time
[2025-12-03 06:04:04] 2025-12-03 10:45:58,288 | INFO     | sum of square deviations: 632167536741.0116
[2025-12-03 06:04:04] 2025-12-03 10:45:58,357 | INFO     | sum of deviations: 1957721524185.62
[2025-12-03 06:04:04] 2025-12-03 10:45:58,363 | INFO     | mean x: 1764720032.3462145
[2025-12-03 06:04:04] 2025-12-03 10:45:58,364 | INFO     | mean y: 3340480.9211356468
[2025-12-03 06:04:04] 2025-12-03 10:45:58,364 | INFO     | intersect: -5461714572.832935
[2025-12-03 06:04:04] 2025-12-03 10:45:58,365 | INFO     | chi2: 36.78098930762711
[2025-12-03 06:04:04] 2025-12-03 10:45:58,367 | INFO     | sum of square deviations: 624719697780.3467
[2025-12-03 06:04:04] 2025-12-03 10:45:58,476 | INFO     | sum of deviations: 2488827370066.2417
[2025-12-03 06:04:04] 2025-12-03 10:45:58,476 | INFO     | mean x: 1764719879.8574822
[2025-12-03 06:04:04] 2025-12-03 10:45:58,477 | INFO     | mean y: 3351352.4402216943
[2025-12-03 06:04:04] 2025-12-03 10:45:58,477 | INFO     | intersect: -7027134724.907032
[2025-12-03 06:04:04] 2025-12-03 10:45:58,478 | INFO     | chi2: 32.9521121986336
[2025-12-03 06:04:04] 2025-12-03 10:45:58,500 | INFO     | current chi2=32.9521121986336 (change=10.409935080782432 %)
[2025-12-03 06:04:04] 2025-12-03 10:45:58,501 | INFO     | right removable region: 1262
[2025-12-03 06:04:04] 2025-12-03 10:45:58,502 | INFO     | sum of square deviations: 624717496290.3468
[2025-12-03 06:04:04] 2025-12-03 10:45:58,611 | INFO     | sum of deviations: 1342742072230.3608
[2025-12-03 06:04:04] 2025-12-03 10:45:58,647 | INFO     | mean x: 1764720184.8574822
[2025-12-03 06:04:04] 2025-12-03 10:45:58,647 | INFO     | mean y: 3353069.163103721
[2025-12-03 06:04:04] 2025-12-03 10:45:58,647 | INFO     | intersect: -3789663857.6767216
[2025-12-03 06:04:04] 2025-12-03 10:45:58,649 | INFO     | chi2: 32.20515857162794
[2025-12-03 06:04:04] 2025-12-03 10:45:58,649 | INFO     | current chi2=32.20515857162794 (change=12.440749479923042 %)
[2025-12-03 06:04:04] 2025-12-03 10:45:58,649 | INFO     | left removable region: 10
[2025-12-03 06:04:04] 2025-12-03 10:45:58,674 | INFO     | sum of square deviations: 608536505049.741
[2025-12-03 06:04:04] 2025-12-03 10:45:58,827 | INFO     | sum of deviations: 1429298019949.437
[2025-12-03 06:04:04] 2025-12-03 10:45:58,828 | INFO     | mean x: 1764720154.382588
[2025-12-03 06:04:04] 2025-12-03 10:45:58,828 | INFO     | mean y: 3377243.322683706
[2025-12-03 06:04:04] 2025-12-03 10:45:58,828 | INFO     | intersect: -4141503140.176622
[2025-12-03 06:04:04] 2025-12-03 10:45:58,887 | INFO     | chi2: 24.250558947551966
[2025-12-03 06:04:04] 2025-12-03 10:45:58,887 | INFO     | current memory leak: 2.35 B/s (using 1252 data points, chi2=24.25)
[2025-12-03 06:04:04] 2025-12-03 10:45:58,889 | INFO     | could have reported an average CPU frequency of 2693 MHz (46 samples)
[2025-12-03 06:04:04] 2025-12-03 10:45:58,890 | INFO     | ..............................
[2025-12-03 06:04:04] 2025-12-03 10:45:58,890 | INFO     | . Timing measurements:
[2025-12-03 06:04:04] 2025-12-03 10:45:58,890 | INFO     | . get job = 0 s
[2025-12-03 06:04:04] 2025-12-03 10:45:58,890 | INFO     | . initial setup = 6 s
[2025-12-03 06:04:04] 2025-12-03 10:45:58,890 | INFO     | . payload setup = 90 s
[2025-12-03 06:04:04] 2025-12-03 10:45:58,890 | INFO     | . stage-in = 0 s
[2025-12-03 06:04:04] 2025-12-03 10:45:58,931 | INFO     | . payload execution = 77347 s
[2025-12-03 06:04:04] 2025-12-03 10:45:58,932 | INFO     | . stage-out = 10 s
[2025-12-03 06:04:04] 2025-12-03 10:45:58,932 | INFO     | . log creation = 3 s
[2025-12-03 06:04:04] 2025-12-03 10:45:58,932 | INFO     | ..............................
[2025-12-03 06:04:04] 2025-12-03 10:45:59,023 | INFO     | time since job start (77591s) is within the limit (172800.0s)
[2025-12-03 06:04:04] 2025-12-03 10:46:00,213 | INFO     | 
[2025-12-03 06:04:04] 2025-12-03 10:46:00,214 | INFO     | job summary report
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | --------------------------------------------------
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | PanDA job id: 6901272986
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | task id: 47531111
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | errors: (none)
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | pilot state: finished 
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | transexitcode: 0
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | exeerrorcode: 0
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | exeerrordiag: 
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | exitcode: 0
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | exitmsg: OK
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | cpuconsumptiontime: 218273 s
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | nevents: 1000
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | neventsw: 0
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | pid: 2382634
[2025-12-03 06:04:04] 2025-12-03 10:46:00,215 | INFO     | pgrp: 2382634
[2025-12-03 06:04:04] 2025-12-03 10:46:00,216 | INFO     | corecount: 8
[2025-12-03 06:04:04] 2025-12-03 10:46:00,216 | INFO     | event service: False
[2025-12-03 06:04:04] 2025-12-03 10:46:00,216 | INFO     | sizes: {0: 2283622, 1: 2284307, 2: 2284506, 14: 2284506, 24: 2284534, 36: 2284562, 46: 2284718, 48: 2285008, 58: 2285036, 77443: 2362173, 77456: 2371167, 77458: 23
[2025-12-03 06:04:04] 2025-12-03 10:46:00,216 | INFO     | --------------------------------------------------
[2025-12-03 06:04:04] 2025-12-03 10:46:00,216 | INFO     | 
[2025-12-03 06:04:04] 2025-12-03 10:46:00,216 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-03 06:04:04] 2025-12-03 10:46:00,333 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,333 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,333 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,333 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,333 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,334 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 06:04:04] 2025-12-03 10:46:00,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,335 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 06:04:04] 2025-12-03 10:46:00,335 | INFO     | job 6901272986 has completed (purged errors)
[2025-12-03 06:04:04] 2025-12-03 10:46:00,335 | INFO     | overall cleanup function is called
[2025-12-03 06:04:04] 2025-12-03 10:46:01,403 | INFO     | --- collectZombieJob: --- 10, [2382634]
[2025-12-03 06:04:04] 2025-12-03 10:46:01,403 | INFO     | zombie collector waiting for pid 2382634
[2025-12-03 06:04:04] 2025-12-03 10:46:01,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 06:04:04] 2025-12-03 10:46:01,404 | INFO     | collected zombie processes
[2025-12-03 06:04:04] 2025-12-03 10:46:01,404 | INFO     | will attempt to kill all subprocesses of pid=2382634
[2025-12-03 06:04:04] 2025-12-03 10:46:03,618 | INFO     | process IDs to be killed: [2382634] (in reverse order)
[2025-12-03 06:04:04] 2025-12-03 10:46:03,994 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 06:04:04] 2025-12-03 10:46:03,994 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 06:04:04] 2025-12-03 10:46:04,016 | INFO     | did not find any defunct processes belonging to 2382634
[2025-12-03 06:04:04] 2025-12-03 10:46:04,037 | INFO     | did not find any defunct processes belonging to 2382634
[2025-12-03 06:04:04] 2025-12-03 10:46:04,042 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 06:04:04] 2025-12-03 10:46:04,043 | INFO     | ready for new job
[2025-12-03 06:04:04] 2025-12-03 10:46:04,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 06:04:04] 2025-12-03 10:46:04,064 | INFO     | ***************************************
[2025-12-03 06:04:04] 2025-12-03 10:46:04,064 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 06:04:04] 2025-12-03 10:46:04,065 | INFO     | ***************************************
[2025-12-03 06:04:04] 2025-12-03 10:46:04,065 | INFO     | 
[2025-12-03 06:04:04] 2025-12-03 10:46:04,071 | INFO     | architecture information:
[2025-12-03 06:04:04] 2025-12-03 10:46:04,071 | INFO     | executing command: cat /etc/os-release
[2025-12-03 06:04:04] 2025-12-03 10:46:04,175 | INFO     | cat /etc/os-release:
[2025-12-03 06:04:04] NAME="CentOS Linux"
[2025-12-03 06:04:04] VERSION="7 (Core)"
[2025-12-03 06:04:04] ID="centos"
[2025-12-03 06:04:04] ID_LIKE="rhel fedora"
[2025-12-03 06:04:04] VERSION_ID="7"
[2025-12-03 06:04:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 06:04:04] ANSI_COLOR="0;31"
[2025-12-03 06:04:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 06:04:04] HOME_URL="https://www.centos.org/"
[2025-12-03 06:04:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 06:04:04] 
[2025-12-03 06:04:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 06:04:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 06:04:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 06:04:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 06:04:04] 
[2025-12-03 06:04:04] 2025-12-03 10:46:04,176 | INFO     | ***************************************
[2025-12-03 06:04:04] 2025-12-03 10:46:04,679 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-03 06:04:04] 2025-12-03 10:46:04,791 | INFO     | sufficient remaining disk space (68656562176 B)
[2025-12-03 06:04:04] 2025-12-03 10:46:04,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 06:04:04] 2025-12-03 10:46:04,792 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 06:04:04] 2025-12-03 10:46:04,792 | INFO     | update_server=False
[2025-12-03 06:04:04] 2025-12-03 10:46:04,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 06:04:04] 2025-12-03 10:46:04,966 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 06:04:04] 2025-12-03 10:46:05,244 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-03 06:04:04] 2025-12-03 10:46:05,244 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-03 06:04:04] 2025-12-03 10:46:05,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 06:04:04] 2025-12-03 10:46:05,245 | INFO     | will abort loop
[2025-12-03 06:04:04] 2025-12-03 10:46:05,277 | INFO     | all payload control threads have been joined
[2025-12-03 06:04:04] 2025-12-03 10:46:05,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 06:04:04] 2025-12-03 10:46:05,797 | INFO     | [job] retrieve thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:05,810 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:05,884 | INFO     | all data control threads have been joined
[2025-12-03 06:04:04] 2025-12-03 10:46:05,914 | INFO     | [payload] validate_post thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:05,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 06:04:04] 2025-12-03 10:46:05,972 | INFO     | [job] queue monitor thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:06,250 | INFO     | [job] job monitor thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:06,283 | INFO     | [payload] control thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:06,404 | INFO     | all job control threads have been joined
[2025-12-03 06:04:04] 2025-12-03 10:46:06,890 | INFO     | [data] control thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:07,037 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:07,059 | INFO     | [job] validate thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:07,060 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:07,060 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:07,061 | INFO     | [data] copytool_in thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:07,251 | INFO     | [payload] failed_post thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:07,431 | INFO     | [job] control thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:07,474 | INFO     | [data] copytool_out thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:09,975 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 06:04:04] 2025-12-03 10:46:11,135 | INFO     | [monitor] cgroup control has ended
[2025-12-03 06:04:04] 2025-12-03 10:46:11,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710895593280)>', '<ExcThread(monitor, started 140710175045376)>']
[2025-12-03 06:04:04] 2025-12-03 10:46:16,177 | INFO     | all workflow threads have been joined
[2025-12-03 06:04:04] 2025-12-03 10:46:16,177 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 06:04:04] 2025-12-03 10:46:16,178 | INFO     | traces error code: 0
[2025-12-03 06:04:04] 2025-12-03 10:46:16,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 06:04:04] 2025-12-03 10:46:33,781 | INFO     | PID=2373056 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 06:04:04] 2025-12-03 10:46:33,781 | INFO     | .. there are 52 such processes running
[2025-12-03 06:04:04] 2025-12-03 10:46:33,782 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 06:04:04] 2025-12-03 10:46:33,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 06:04:04] 2025-12-03 10:46:33,804 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 06:04:04] 2025-12-03 10:46:33,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 06:04:04] 2025-12-03 10:46:33,805 | INFO     | [monitor] control thread has ended
[2025-12-03 06:04:04] 2025-12-03 10:46:34,643 [wrapper] ==== pilot stdout END ====
[2025-12-03 06:04:04] 2025-12-03 10:46:34,654 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 06:04:04] 2025-12-03 10:46:34,738 [wrapper] pilotpid: 2373056
[2025-12-03 06:04:04] 2025-12-03 10:46:34,766 [wrapper] Pilot exit status: 0
[2025-12-03 06:04:04] 2025-12-03 10:46:34,846 [wrapper] pandaids: 6901272986
[2025-12-03 06:04:04] 2025-12-03 10:46:35,193 [wrapper] cleanup supervisor_pilot 3361712 2373057
[2025-12-03 06:04:04] 2025-12-03 10:46:35,205 [wrapper] Test setup, not cleaning
[2025-12-03 06:04:04] 2025-12-03 10:46:35,241 [wrapper] apfmon messages muted
[2025-12-03 06:04:04] 2025-12-03 10:46:35,280 [wrapper] ==== wrapper stdout END ====
[2025-12-03 06:04:04] 2025-12-03 10:46:35,357 [wrapper] ==== wrapper stderr END ====
[2025-12-03 06:04:04]  *** Error codes and diagnostics ***
[2025-12-03 06:04:04]     "exeErrorCode": 0,
[2025-12-03 06:04:04]     "exeErrorDiag": "",
[2025-12-03 06:04:04]     "pilotErrorCode": 0,
[2025-12-03 06:04:04]     "pilotErrorDiag": "",
[2025-12-03 06:04:04]  *** Listing of results directory ***
[2025-12-03 06:04:05] total 1085820
[2025-12-03 06:04:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 29 04:19 pilot3.tar.gz
[2025-12-03 06:04:05] -rwx------. 1 boincer umatlas     36292 Nov 29 04:22 runpilot2-wrapper.sh
[2025-12-03 06:04:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 29 04:26 queuedata.json
[2025-12-03 06:04:05] -rw-r--r--. 1 boincer umatlas       100 Dec  2 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 06:04:05] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 08:11 run_atlas
[2025-12-03 06:04:05] -rw-r--r--. 1 boincer umatlas       105 Dec  2 08:11 job.xml
[2025-12-03 06:04:05] -rw-r--r--. 2 boincer umatlas 378657779 Dec  2 08:11 EVNT.47531104._000087.pool.root.1
[2025-12-03 06:04:05] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 08:11 start_atlas.sh
[2025-12-03 06:04:05] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 08:11 shared
[2025-12-03 06:04:05] -rw-r--r--. 2 boincer umatlas    590122 Dec  2 08:11 input.tar.gz
[2025-12-03 06:04:05] -rw-r--r--. 1 boincer umatlas         0 Dec  2 08:11 boinc_lockfile
[2025-12-03 06:04:05] -rw-r--r--. 1 boincer umatlas      2879 Dec  2 08:11 pandaJob.out
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas        57 Dec  2 08:11 setup.sh.local
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas    987476 Dec  2 08:12 agis_schedconf.cvmfs.json
[2025-12-03 06:04:05] drwx------. 5 boincer umatlas      4096 Dec  2 08:12 pilot3
[2025-12-03 06:04:05] -rw-r--r--. 1 boincer umatlas       533 Dec  3 05:02 boinc_task_state.xml
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas 706282396 Dec  3 05:42 HITS.47531111._000860.pool.root.1
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas      1059 Dec  3 05:44 memory_monitor_summary.json
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas   1516240 Dec  3 05:45 agis_ddmendpoints.agis.ALL.json
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas   2404884 Dec  3 05:45 log.47531111._000860.job.log.tgz.1
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas     26388 Dec  3 05:45 heartbeat.json
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas        95 Dec  3 05:46 pilot_heartbeat.json
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas       823 Dec  3 05:46 pilotlog.txt
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas   9092556 Dec  3 05:46 log.47531111._000860.job.log.1
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas       353 Dec  3 05:46 output.list
[2025-12-03 06:04:05] -rw-r--r--. 1 boincer umatlas       620 Dec  3 05:46 runtime_log
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas  11530240 Dec  3 05:46 result.tar.gz
[2025-12-03 06:04:05] -rw-r--r--. 1 boincer umatlas      9348 Dec  3 05:46 runtime_log.err
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas       661 Dec  3 05:46 ersNDmPLWj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmduLKDmEWgmzn.diag
[2025-12-03 06:04:05] -rw-r--r--. 1 boincer umatlas      6878 Dec  3 06:02 init_data.xml
[2025-12-03 06:04:05] -rw-r--r--. 1 boincer umatlas        29 Dec  3 06:04 wrapper_checkpoint.txt
[2025-12-03 06:04:05] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 06:04 boinc_mmap_file
[2025-12-03 06:04:05] -rw-r--r--. 1 boincer umatlas     21805 Dec  3 06:04 stderr.txt
[2025-12-03 06:04:05] HITS file was successfully produced:
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas 706282396 Dec  3 05:42 shared/HITS.pool.root.1
[2025-12-03 06:04:05]  *** Contents of shared directory: ***
[2025-12-03 06:04:05] total 1071380
[2025-12-03 06:04:05] -rw-r--r--. 2 boincer umatlas 378657779 Dec  2 08:11 ATLAS.root_0
[2025-12-03 06:04:05] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 08:11 start_atlas.sh
[2025-12-03 06:04:05] -rw-r--r--. 2 boincer umatlas    590122 Dec  2 08:11 input.tar.gz
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas 706282396 Dec  3 05:42 HITS.pool.root.1
[2025-12-03 06:04:05] -rw-------. 1 boincer umatlas  11530240 Dec  3 05:46 result.tar.gz
06:04:06 (2368214): run_atlas exited; CPU time 221460.019952
06:04:06 (2368214): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN