Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:03:14 (3799391): wrapper (7.7.26015): starting
03:03:14 (3799391): wrapper: running run_atlas (--nthreads 3)
[2025-12-05 03:03:14] Arguments: --nthreads 3
[2025-12-05 03:03:14] Threads: 3
[2025-12-05 03:03:14] Checking for CVMFS
[2025-12-05 03:03:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-05 03:03:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-05 03:03:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-05 03:03:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-05 03:03:14] 2.9.2.0 2507813 9261 93580 153639 1 90 18723529 36864000 0 130560 0 3478215 99.984 308544 655 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-05 03:03:14] CVMFS is ok
[2025-12-05 03:03:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-05 03:03:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-05 03:03:14] Further information can be found at the LHC@home message board.
[2025-12-05 03:03:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-05 03:03:14] Checking for apptainer binary...
[2025-12-05 03:03:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-05 03:03:14] Running /usr/bin/apptainer --version
[2025-12-05 03:03:14] apptainer version 1.4.1-1.1
[2025-12-05 03:03:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-05 03:03:14] magicA246a
[2025-12-05 03:03:14] apptainer works
[2025-12-05 03:03:14] Set ATHENA_PROC_NUMBER=3
[2025-12-05 03:03:14] Set ATHENA_CORE_NUMBER=3
[2025-12-05 03:03:14] Starting ATLAS job with PandaID=6893885909
[2025-12-05 03:03:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-05 10:54:00]  *** The last 200 lines of the pilot log: ***
[2025-12-05 10:54:00] 2025-12-05 09:53:09,800 | INFO     | [payload] validate_post thread has finished
[2025-12-05 10:54:00] 2025-12-05 09:53:10,040 | INFO     | [data] control thread has finished
[2025-12-05 10:54:00] 2025-12-05 09:53:10,067 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-05 10:54:00] 2025-12-05 09:53:10,356 | INFO     | [job] control thread has finished
[2025-12-05 10:54:00] 2025-12-05 09:53:10,563 | INFO     | [payload] execute_payloads thread has finished
[2025-12-05 10:54:00] 2025-12-05 09:53:10,600 | INFO     | [data] copytool_out thread has finished
[2025-12-05 10:54:00] 2025-12-05 09:53:10,615 | INFO     | [payload] control thread has finished
[2025-12-05 10:54:00] 2025-12-05 09:53:10,637 | INFO     | [data] copytool_in thread has finished
[2025-12-05 10:54:00] 2025-12-05 09:53:10,843 | INFO     | [payload] failed_post thread has finished
[2025-12-05 10:54:00] 2025-12-05 09:53:10,845 | INFO     | [job] create_data_payload thread has finished
[2025-12-05 10:54:00] 2025-12-05 09:53:10,849 | INFO     | [payload] validate_pre thread has finished
[2025-12-05 10:54:00] 2025-12-05 09:53:10,853 | INFO     | [job] validate thread has finished
[2025-12-05 10:54:00] 2025-12-05 09:53:11,537 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-05 10:54:00] 2025-12-05 09:53:15,544 | INFO     | [data] queue_monitor thread has finished
[2025-12-05 10:54:00] 2025-12-05 09:53:38,532 | INFO     | PID=3803112 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-05 10:54:00] 2025-12-05 09:53:38,532 | INFO     | found 0 job(s) in 20 queues
[2025-12-05 10:54:00] 2025-12-05 09:53:38,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-05 10:54:00] 2025-12-05 09:53:38,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-05 10:54:00] 2025-12-05 09:53:54,075 | INFO     | [monitor] cgroup control has ended
[2025-12-05 10:54:00] 2025-12-05 09:53:55,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140408306472768)>', '<ExcThread(monitor, started 140407816042240)>']
[2025-12-05 10:54:00] 2025-12-05 09:53:56,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-05 10:54:00] 2025-12-05 09:53:56,626 | INFO     | [monitor] control thread has ended
[2025-12-05 10:54:00] 2025-12-05 09:54:00,681 | INFO     | all workflow threads have been joined
[2025-12-05 10:54:00] 2025-12-05 09:54:00,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-05 10:54:00] 2025-12-05 09:54:00,682 | INFO     | traces error code: 0
[2025-12-05 10:54:00] 2025-12-05 09:54:00,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-05 10:54:00] 2025-12-05 09:54:00,735 [wrapper] ==== pilot stdout END ====
[2025-12-05 10:54:00] 2025-12-05 09:54:00,738 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-05 10:54:00] 2025-12-05 09:54:00,740 [wrapper] pilotpid: 3803112
[2025-12-05 10:54:00] 2025-12-05 09:54:00,743 [wrapper] Pilot exit status: 0
[2025-12-05 10:54:00] 2025-12-05 09:54:00,750 [wrapper] pandaids: 6893885909
[2025-12-05 10:54:00] 2025-12-05 09:54:00,767 [wrapper] cleanup supervisor_pilot 3861240 3803113
[2025-12-05 10:54:00] 2025-12-05 09:54:00,769 [wrapper] Test setup, not cleaning
[2025-12-05 10:54:00] 2025-12-05 09:54:00,772 [wrapper] apfmon messages muted
[2025-12-05 10:54:00] 2025-12-05 09:54:00,774 [wrapper] ==== wrapper stdout END ====
[2025-12-05 10:54:00] 2025-12-05 09:54:00,776 [wrapper] ==== wrapper stderr END ====
[2025-12-05 10:54:00]  *** Error codes and diagnostics ***
[2025-12-05 10:54:00]     "exeErrorCode": 0,
[2025-12-05 10:54:00]     "exeErrorDiag": "",
[2025-12-05 10:54:00]     "pilotErrorCode": 0,
[2025-12-05 10:54:00]     "pilotErrorDiag": "",
[2025-12-05 10:54:00]  *** Listing of results directory ***
[2025-12-05 10:54:00] total 1311000
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc    576529 Nov 20 22:55 pilot3.tar.gz
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc      5112 Nov 20 23:11 queuedata.json
[2025-12-05 10:54:00] -rwx------ 1 boinc boinc     36292 Nov 20 23:12 runpilot2-wrapper.sh
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc       100 Dec  5 03:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-05 10:54:00] -rwxr-xr-x 1 boinc boinc      7986 Dec  5 03:03 run_atlas
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc       105 Dec  5 03:03 job.xml
[2025-12-05 10:54:00] -rw-r--r-- 2 boinc boinc 410599629 Dec  5 03:03 EVNT.47493127._000944.pool.root.1
[2025-12-05 10:54:00] -rw-r--r-- 2 boinc boinc    590105 Dec  5 03:03 input.tar.gz
[2025-12-05 10:54:00] -rw-r--r-- 2 boinc boinc     15847 Dec  5 03:03 start_atlas.sh
[2025-12-05 10:54:00] drwxrwx--x 2 boinc boinc      4096 Dec  5 03:03 shared
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc         0 Dec  5 03:03 boinc_setup_complete
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc      6448 Dec  5 03:03 init_data.xml
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc         0 Dec  5 03:03 boinc_lockfile
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc      2783 Dec  5 03:03 pandaJob.out
[2025-12-05 10:54:00] -rw------- 1 boinc boinc    985572 Dec  5 03:03 agis_schedconf.cvmfs.json
[2025-12-05 10:54:00] drwx------ 5 boinc boinc      4096 Dec  5 03:03 pilot3
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc       532 Dec  5 10:49 boinc_task_state.xml
[2025-12-05 10:54:00] -rw------- 1 boinc boinc 917723338 Dec  5 10:52 HITS.47523449._009431.pool.root.1
[2025-12-05 10:54:00] -rw------- 1 boinc boinc        95 Dec  5 10:52 pilot_heartbeat.json
[2025-12-05 10:54:00] -rw------- 1 boinc boinc      1033 Dec  5 10:52 memory_monitor_summary.json
[2025-12-05 10:54:00] -rw------- 1 boinc boinc   1516240 Dec  5 10:52 agis_ddmendpoints.agis.ALL.json
[2025-12-05 10:54:00] -rw------- 1 boinc boinc   1153459 Dec  5 10:52 log.47523449._009431.job.log.tgz.1
[2025-12-05 10:54:00] -rw------- 1 boinc boinc      8565 Dec  5 10:53 heartbeat.json
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc      8192 Dec  5 10:53 boinc_mmap_file
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc        28 Dec  5 10:53 wrapper_checkpoint.txt
[2025-12-05 10:54:00] -rw------- 1 boinc boinc      4752 Dec  5 10:54 pilotlog.txt
[2025-12-05 10:54:00] -rw------- 1 boinc boinc   3969516 Dec  5 10:54 log.47523449._009431.job.log.1
[2025-12-05 10:54:00] -rw------- 1 boinc boinc       353 Dec  5 10:54 output.list
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc       620 Dec  5 10:54 runtime_log
[2025-12-05 10:54:00] -rw------- 1 boinc boinc   5140480 Dec  5 10:54 result.tar.gz
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc      8918 Dec  5 10:54 runtime_log.err
[2025-12-05 10:54:00] -rw------- 1 boinc boinc       669 Dec  5 10:54 X98KDmV4Rg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDcIKDmFupsBo.diag
[2025-12-05 10:54:00] -rw-r--r-- 1 boinc boinc      6145 Dec  5 10:54 stderr.txt
[2025-12-05 10:54:00] HITS file was successfully produced:
[2025-12-05 10:54:00] -rw------- 1 boinc boinc 917723338 Dec  5 10:52 shared/HITS.pool.root.1
[2025-12-05 10:54:00]  *** Contents of shared directory: ***
[2025-12-05 10:54:00] total 1302820
[2025-12-05 10:54:00] -rw-r--r-- 2 boinc boinc 410599629 Dec  5 03:03 ATLAS.root_0
[2025-12-05 10:54:00] -rw-r--r-- 2 boinc boinc    590105 Dec  5 03:03 input.tar.gz
[2025-12-05 10:54:00] -rw-r--r-- 2 boinc boinc     15847 Dec  5 03:03 start_atlas.sh
[2025-12-05 10:54:00] -rw------- 1 boinc boinc 917723338 Dec  5 10:52 HITS.pool.root.1
[2025-12-05 10:54:00] -rw------- 1 boinc boinc   5140480 Dec  5 10:54 result.tar.gz
10:54:02 (3799391): run_atlas exited; CPU time 83230.526499
10:54:02 (3799391): called boinc_finish(0)

</stderr_txt>
]]>

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