Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-03 07:26:32 (51552): vboxwrapper version 26210
2025-12-03 07:26:32 (51552): BOINC client version: 8.0.2
2025-12-03 07:26:32 (51552): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-12-03 07:26:32 (51552): Successfully copied 'init_data.xml' to the shared directory.
2025-12-03 07:26:33 (51552): Create VM. (boinc_ce79c024332699b8, slot#2)
2025-12-03 07:26:33 (51552): Setting Memory Size for VM. (4400MB)
2025-12-03 07:26:33 (51552): Setting CPU Count for VM. (4)
2025-12-03 07:26:34 (51552): Setting Chipset Options for VM.
2025-12-03 07:26:34 (51552): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-03 07:26:34 (51552): Setting Boot Options for VM.
2025-12-03 07:26:35 (51552): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-03 07:26:35 (51552): Enabling VM Network Access.
2025-12-03 07:26:35 (51552): Disabling USB Support for VM.
2025-12-03 07:26:35 (51552): Disabling COM Port Support for VM.
2025-12-03 07:26:36 (51552): Disabling LPT Port Support for VM.
2025-12-03 07:26:36 (51552): Disabling Audio Support for VM.
2025-12-03 07:26:36 (51552): Disabling Clipboard Support for VM.
2025-12-03 07:26:37 (51552): Disabling Drag and Drop Support for VM.
2025-12-03 07:26:37 (51552): Adding storage controller(s) to VM.
2025-12-03 07:26:37 (51552): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-03 07:26:38 (51552): Adding VirtualBox Guest Additions to VM.
2025-12-03 07:26:38 (51552): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-03 07:26:38 (51552): forwarding host port 49890 to guest port 80
2025-12-03 07:26:38 (51552): Enabling remote desktop for VM.
2025-12-03 07:26:39 (51552): Enabling shared directory for VM.
2025-12-03 07:26:40 (51552): Starting VM using VBoxManage interface. (boinc_ce79c024332699b8, slot#2)
2025-12-03 07:26:44 (51552): Successfully started VM. (PID = '52156')
2025-12-03 07:26:44 (51552): Reporting VM Process ID to BOINC.
2025-12-03 07:26:44 (51552): Guest Log: BIOS: VirtualBox 7.1.6
2025-12-03 07:26:44 (51552): Guest Log: CPUID EDX: 0x178bfbff
2025-12-03 07:26:44 (51552): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-03 07:26:44 (51552): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-03 07:26:44 (51552): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-03 07:26:44 (51552): Detected: Web Application Enabled (http://localhost:49890)
2025-12-03 07:26:44 (51552): Detected: Remote Desktop Enabled (localhost:49891)
2025-12-03 07:26:44 (51552): Preference change detected
2025-12-03 07:26:44 (51552): Setting CPU throttle for VM. (100%)
2025-12-03 07:26:44 (51552): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-03 07:26:46 (51552): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-03 07:26:46 (51552): Guest Log: BIOS: Booting from Hard Disk...
2025-12-03 07:26:48 (51552): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-03 07:26:48 (51552): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-03 07:26:48 (51552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-03 07:26:52 (51552): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-03 07:26:52 (51552): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-03 07:26:56 (51552): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-03 07:26:56 (51552): Guest Log: 00:00:00.000088 main     Log opened 2025-12-03T07:26:54.542387000Z
2025-12-03 07:26:56 (51552): Guest Log: 00:00:00.000162 main     OS Product: Linux
2025-12-03 07:26:56 (51552): Guest Log: 00:00:00.000176 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-03 07:26:56 (51552): Guest Log: 00:00:00.000188 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-03 07:26:56 (51552): Guest Log: 00:00:00.000200 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-03 07:26:56 (51552): Guest Log: 00:00:00.000200 main     Process ID: 1317
2025-12-03 07:26:56 (51552): Guest Log: 00:00:00.000201 main     Package type: LINUX_64BITS_GENERIC
2025-12-03 07:26:56 (51552): Guest Log: 00:00:00.000625 main     5.2.32 r132073 started. Verbose level = 0
2025-12-03 07:26:56 (51552): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-03 07:26:56 (51552): Guest Log: [INFO] Mounting shared directory
2025-12-03 07:26:56 (51552): Guest Log: [INFO] Checking for init_data.xml
2025-12-03 07:26:59 (51552): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-03 07:26:59 (51552): Guest Log: [INFO] Detected branch: prod
2025-12-03 07:26:59 (51552): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-03 07:26:59 (51552): Guest Log: Copying input files
2025-12-03 07:27:00 (51552): Guest Log: Copied input files into RunAtlas.
2025-12-03 07:27:00 (51552): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-03 07:27:00 (51552): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-03 07:27:00 (51552): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-03 07:27:00 (51552): Guest Log: Further information can be found at the LHC@home message board.
2025-12-03 07:27:05 (51552): Guest Log: 00:00:10.002077 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 897 051 000ns (GuestNow=1 764 739 625 646 621 000 ns GuestLast=1 764 746 814 543 672 000 ns fSetTimeLastLoop=true )
2025-12-03 07:27:28 (51552): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-03 07:27:28 (51552): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-03 07:27:28 (51552): Guest Log: 2.6.3.0 1591 0 30188 153582 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-12-03 07:27:28 (51552): Guest Log: copied the webapp to /var/www
2025-12-03 07:27:28 (51552): Guest Log: ATHENA_PROC_NUMBER=4
2025-12-03 07:27:28 (51552): Guest Log: ATHENA_CORE_NUMBER=4
2025-12-03 07:27:28 (51552): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-03 07:27:28 (51552): Guest Log:  *** Starting ATLAS job. (PandaID=6893852898 taskID=47523449) ***
2025-12-03 09:06:46 (51552): Status Report: Elapsed Time: '6000.000000'
2025-12-03 09:06:46 (51552): Status Report: CPU Time: '22141.109375'
2025-12-03 10:46:49 (51552): Status Report: Elapsed Time: '12000.000000'
2025-12-03 10:46:49 (51552): Status Report: CPU Time: '45779.046875'
2025-12-03 12:26:51 (51552): Status Report: Elapsed Time: '18000.000000'
2025-12-03 12:26:51 (51552): Status Report: CPU Time: '69340.390625'
2025-12-03 14:06:54 (51552): Status Report: Elapsed Time: '24000.000000'
2025-12-03 14:06:54 (51552): Status Report: CPU Time: '92882.328125'
2025-12-03 15:46:56 (51552): Status Report: Elapsed Time: '30000.000000'
2025-12-03 15:46:56 (51552): Status Report: CPU Time: '116469.875000'
2025-12-03 17:26:58 (51552): Status Report: Elapsed Time: '36000.000000'
2025-12-03 17:26:58 (51552): Status Report: CPU Time: '139506.437500'
2025-12-03 19:07:01 (51552): Status Report: Elapsed Time: '42000.000000'
2025-12-03 19:07:01 (51552): Status Report: CPU Time: '162301.578125'
2025-12-03 19:36:22 (51552): Guest Log:  *** Job finished ***
2025-12-03 19:36:22 (51552): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:22,560 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:22,560 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:36,522 | INFO     | [monitor] cgroup control has ended
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:38,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140561853601600)>', '<ExcThread(monitor, started 140561545664256)>']
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:38,987 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:38,987 | INFO     | [monitor] control thread has ended
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,443 | INFO     | all workflow threads have been joined
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,443 | INFO     | end of generic workflow (traces error code: 0)
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,443 | INFO     | traces error code: 0
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,528 [wrapper] ==== pilot stdout END ====
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,531 [wrapper] ==== wrapper stdout RESUME ====
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,533 [wrapper] pilotpid: 5991
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,536 [wrapper] Pilot exit status: 0
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,548 [wrapper] pandaids: 6893852898
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,570 [wrapper] cleanup supervisor_pilot 13402 5992
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,573 [wrapper] Test setup, not cleaning
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,577 [wrapper] apfmon messages muted
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,581 [wrapper] ==== wrapper stdout END ====
2025-12-03 19:36:22 (51552): Guest Log: 2025-12-03 17:50:43,584 [wrapper] ==== wrapper stderr END ====
2025-12-03 19:36:22 (51552): Guest Log:  *** Error codes and diagnostics ***
2025-12-03 19:36:22 (51552): Guest Log:     "exeErrorCode": 0,
2025-12-03 19:36:22 (51552): Guest Log:     "exeErrorDiag": "",
2025-12-03 19:36:22 (51552): Guest Log:     "pilotErrorCode": 0,
2025-12-03 19:36:22 (51552): Guest Log:     "pilotErrorDiag": "",
2025-12-03 19:36:22 (51552): Guest Log:  *** Listing of results directory ***
2025-12-03 19:36:22 (51552): Guest Log: total 920684
2025-12-03 19:36:22 (51552): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 20 12:07 pilot3.tar.gz
2025-12-03 19:36:22 (51552): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 20 12:09 queuedata.json
2025-12-03 19:36:22 (51552): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 20 12:10 runpilot2-wrapper.sh
2025-12-03 19:36:22 (51552): Guest Log: -rwxr-xr-x. 1 atlas atlas     12028 Dec  3 05:26 init_data.xml
2025-12-03 19:36:22 (51552): Guest Log: -rwxr-xr-x. 1 atlas atlas    590096 Dec  3 05:26 input.tar.gz
2025-12-03 19:36:22 (51552): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec  3 05:26 start_atlas.sh
2025-12-03 19:36:22 (51552): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec  3 05:26 EVNT.47493127._000407.pool.root.1 -> /data/./ATLAS.root_0
2025-12-03 19:36:22 (51552): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Dec  3 05:27 pandaJob.out
2025-12-03 19:36:22 (51552): Guest Log: -rw-------. 1 atlas atlas    985779 Dec  3 05:27 agis_schedconf.cvmfs.json
2025-12-03 19:36:22 (51552): Guest Log: drwx------. 5 atlas atlas      4096 Dec  3 05:27 pilot3
2025-12-03 19:36:22 (51552): Guest Log: -rw-------. 1 atlas atlas 924316207 Dec  3 17:49 HITS.47523449._004062.pool.root.1
2025-12-03 19:36:22 (51552): Guest Log: -rw-------. 1 atlas atlas      1048 Dec  3 17:49 memory_monitor_summary.json
2025-12-03 19:36:22 (51552): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec  3 17:49 agis_ddmendpoints.agis.ALL.json
2025-12-03 19:36:22 (51552): Guest Log: -rw-------. 1 atlas atlas   1482076 Dec  3 17:49 log.47523449._004062.job.log.tgz.1
2025-12-03 19:36:22 (51552): Guest Log: -rw-------. 1 atlas atlas        96 Dec  3 17:49 pilot_heartbeat.json
2025-12-03 19:36:22 (51552): Guest Log: -rw-------. 1 atlas atlas      8612 Dec  3 17:49 heartbeat.json
2025-12-03 19:36:22 (51552): Guest Log: -rw-------. 1 atlas atlas      4805 Dec  3 17:50 pilotlog.txt
2025-12-03 19:36:22 (51552): Guest Log: -rw-------. 1 atlas atlas   5830324 Dec  3 17:50 log.47523449._004062.job.log.1
2025-12-03 19:36:22 (51552): Guest Log: -rw-------. 1 atlas atlas       353 Dec  3 17:50 output.list
2025-12-03 19:36:22 (51552): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec  3 17:50 runtime_log
2025-12-03 19:36:22 (51552): Guest Log: -rw-------. 1 atlas atlas   7331840 Dec  3 17:50 result.tar.gz
2025-12-03 19:36:22 (51552): Guest Log: -rw-r--r--. 1 atlas atlas      8749 Dec  3 17:50 runtime_log.err
2025-12-03 19:36:22 (51552): Guest Log: -rw-------. 1 atlas atlas       664 Dec  3 17:50 qvbMDmffIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLbGKDmCHIikn.diag
2025-12-03 19:36:22 (51552): Guest Log: Looking for outputfile HITS.47523449._004062.pool.root.1
2025-12-03 19:36:22 (51552): Guest Log: HITS file was successfully produced
2025-12-03 19:36:22 (51552): Guest Log: -rw-------. 1 atlas atlas 924316207 Dec  3 17:49 /home/atlas/RunAtlas/HITS.47523449._004062.pool.root.1
2025-12-03 19:36:25 (51552): Guest Log: Successfully finished the ATLAS job!
2025-12-03 19:36:25 (51552): Guest Log: Copying the results back to the shared directory!
2025-12-03 19:36:25 (51552): Guest Log:  *** Contents of shared directory: ***
2025-12-03 19:36:25 (51552): Guest Log: total 1309596
2025-12-03 19:36:25 (51552): Guest Log: -rwxrwxrwx. 1 root root 408751245 Dec  3 05:26 ATLAS.root_0
2025-12-03 19:36:25 (51552): Guest Log: -rwxrwxrwx. 1 root root 924316207 Dec  3 17:36 HITS.pool.root.1
2025-12-03 19:36:25 (51552): Guest Log: -rwxrwxrwx. 1 root root     12028 Dec  3 05:26 init_data.xml
2025-12-03 19:36:25 (51552): Guest Log: -rwxrwxrwx. 1 root root    590096 Dec  2 12:33 input.tar.gz
2025-12-03 19:36:25 (51552): Guest Log: -rwxrwxrwx. 1 root root   7331840 Dec  3 17:36 result.tar.gz
2025-12-03 19:36:25 (51552): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec  2 12:33 start_atlas.sh
2025-12-03 19:36:25 (51552): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-03 19:36:25 (51552): VM Completion File Detected.
2025-12-03 19:36:25 (51552): Powering off VM.
2025-12-03 19:36:25 (51552): Successfully stopped VM.
2025-12-03 19:36:25 (51552): Deregistering VM. (boinc_ce79c024332699b8, slot#2)
2025-12-03 19:36:25 (51552): Removing network bandwidth throttle group from VM.
2025-12-03 19:36:25 (51552): Removing VM from VirtualBox.
2025-12-03 19:36:31 (51552): called boinc_finish(0)

</stderr_txt>
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