Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-03 06:37:34 (28072): vboxwrapper version 26210
2025-12-03 06:37:34 (28072): BOINC client version: 8.0.2
2025-12-03 06:37:35 (28072): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-12-03 06:37:35 (28072): Successfully copied 'init_data.xml' to the shared directory.
2025-12-03 06:37:35 (28072): Create VM. (boinc_a1a255e9ca2e448d, slot#6)
2025-12-03 06:37:36 (28072): Setting Memory Size for VM. (4400MB)
2025-12-03 06:37:36 (28072): Setting CPU Count for VM. (4)
2025-12-03 06:37:36 (28072): Setting Chipset Options for VM.
2025-12-03 06:37:37 (28072): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-03 06:37:37 (28072): Setting Boot Options for VM.
2025-12-03 06:37:37 (28072): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-03 06:37:38 (28072): Enabling VM Network Access.
2025-12-03 06:37:38 (28072): Disabling USB Support for VM.
2025-12-03 06:37:38 (28072): Disabling COM Port Support for VM.
2025-12-03 06:37:38 (28072): Disabling LPT Port Support for VM.
2025-12-03 06:37:39 (28072): Disabling Audio Support for VM.
2025-12-03 06:37:39 (28072): Disabling Clipboard Support for VM.
2025-12-03 06:37:39 (28072): Disabling Drag and Drop Support for VM.
2025-12-03 06:37:39 (28072): Adding storage controller(s) to VM.
2025-12-03 06:37:40 (28072): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-03 06:37:40 (28072): Adding VirtualBox Guest Additions to VM.
2025-12-03 06:37:40 (28072): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-03 06:37:41 (28072): forwarding host port 50380 to guest port 80
2025-12-03 06:37:41 (28072): Enabling remote desktop for VM.
2025-12-03 06:37:41 (28072): Enabling shared directory for VM.
2025-12-03 06:37:42 (28072): Starting VM using VBoxManage interface. (boinc_a1a255e9ca2e448d, slot#6)
2025-12-03 06:37:47 (28072): Successfully started VM. (PID = '46012')
2025-12-03 06:37:47 (28072): Reporting VM Process ID to BOINC.
2025-12-03 06:37:47 (28072): Guest Log: BIOS: VirtualBox 7.1.6
2025-12-03 06:37:47 (28072): Guest Log: CPUID EDX: 0x178bfbff
2025-12-03 06:37:47 (28072): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-03 06:37:47 (28072): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-03 06:37:47 (28072): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-03 06:37:47 (28072): Detected: Web Application Enabled (http://localhost:50380)
2025-12-03 06:37:47 (28072): Detected: Remote Desktop Enabled (localhost:50381)
2025-12-03 06:37:47 (28072): Preference change detected
2025-12-03 06:37:47 (28072): Setting CPU throttle for VM. (100%)
2025-12-03 06:37:47 (28072): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-03 06:37:49 (28072): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-03 06:37:49 (28072): Guest Log: BIOS: Booting from Hard Disk...
2025-12-03 06:37:51 (28072): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-03 06:37:51 (28072): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-03 06:37:51 (28072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-03 06:37:56 (28072): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-03 06:37:56 (28072): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-03 06:37:59 (28072): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-03 06:37:59 (28072): Guest Log: 00:00:00.000122 main     Log opened 2025-12-03T06:37:57.667873000Z
2025-12-03 06:37:59 (28072): Guest Log: 00:00:00.000182 main     OS Product: Linux
2025-12-03 06:37:59 (28072): Guest Log: 00:00:00.000195 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-03 06:37:59 (28072): Guest Log: 00:00:00.000205 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-03 06:37:59 (28072): Guest Log: 00:00:00.000215 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-03 06:37:59 (28072): Guest Log: 00:00:00.000215 main     Process ID: 1311
2025-12-03 06:37:59 (28072): Guest Log: 00:00:00.000216 main     Package type: LINUX_64BITS_GENERIC
2025-12-03 06:37:59 (28072): Guest Log: 00:00:00.000702 main     5.2.32 r132073 started. Verbose level = 0
2025-12-03 06:37:59 (28072): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-03 06:37:59 (28072): Guest Log: [INFO] Mounting shared directory
2025-12-03 06:37:59 (28072): Guest Log: [INFO] Checking for init_data.xml
2025-12-03 06:38:08 (28072): Guest Log: 00:00:10.022925 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 065 281 000ns (GuestNow=1 764 736 688 604 028 000 ns GuestLast=1 764 743 877 669 309 000 ns fSetTimeLastLoop=true )
2025-12-03 06:38:43 (28072): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-03 06:38:43 (28072): Guest Log: [INFO] Detected branch: prod
2025-12-03 06:38:43 (28072): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-03 06:38:43 (28072): Guest Log: Copying input files
2025-12-03 06:38:44 (28072): Guest Log: Copied input files into RunAtlas.
2025-12-03 06:38:44 (28072): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-03 06:38:44 (28072): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-03 06:38:44 (28072): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-03 06:38:44 (28072): Guest Log: Further information can be found at the LHC@home message board.
2025-12-03 06:38:51 (28072): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-03 06:38:51 (28072): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-03 06:38:51 (28072): Guest Log: 2.6.3.0 1611 0 32160 153581 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-12-03 06:38:52 (28072): Guest Log: copied the webapp to /var/www
2025-12-03 06:38:52 (28072): Guest Log: ATHENA_PROC_NUMBER=4
2025-12-03 06:38:52 (28072): Guest Log: ATHENA_CORE_NUMBER=4
2025-12-03 06:38:52 (28072): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-03 06:38:52 (28072): Guest Log:  *** Starting ATLAS job. (PandaID=6900801340 taskID=47530783) ***
2025-12-03 08:17:49 (28072): Status Report: Elapsed Time: '6000.000000'
2025-12-03 08:17:49 (28072): Status Report: CPU Time: '22506.843750'
2025-12-03 09:57:52 (28072): Status Report: Elapsed Time: '12000.000000'
2025-12-03 09:57:52 (28072): Status Report: CPU Time: '46151.671875'
2025-12-03 11:37:54 (28072): Status Report: Elapsed Time: '18000.000000'
2025-12-03 11:37:54 (28072): Status Report: CPU Time: '69761.734375'
2025-12-03 13:17:57 (28072): Status Report: Elapsed Time: '24000.000000'
2025-12-03 13:17:57 (28072): Status Report: CPU Time: '93318.046875'
2025-12-03 14:57:59 (28072): Status Report: Elapsed Time: '30000.000000'
2025-12-03 14:57:59 (28072): Status Report: CPU Time: '116944.515625'
2025-12-03 16:38:01 (28072): Status Report: Elapsed Time: '36000.000000'
2025-12-03 16:38:01 (28072): Status Report: CPU Time: '140533.328125'
2025-12-03 17:02:42 (28072): Guest Log:  *** Job finished ***
2025-12-03 17:02:42 (28072): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:11:47,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:11:47,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:04,317 | INFO     | [monitor] cgroup control has ended
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:06,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485648262976)>', '<ExcThread(monitor, started 140484546651904)>']
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:06,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:06,074 | INFO     | [monitor] control thread has ended
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,051 | INFO     | all workflow threads have been joined
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,051 | INFO     | end of generic workflow (traces error code: 0)
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,051 | INFO     | traces error code: 0
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,132 [wrapper] ==== pilot stdout END ====
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,135 [wrapper] ==== wrapper stdout RESUME ====
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,138 [wrapper] pilotpid: 6009
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,140 [wrapper] Pilot exit status: 0
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,147 [wrapper] pandaids: 6900801340
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,165 [wrapper] cleanup supervisor_pilot  3940 6010
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,168 [wrapper] Test setup, not cleaning
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,170 [wrapper] apfmon messages muted
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,172 [wrapper] ==== wrapper stdout END ====
2025-12-03 17:02:42 (28072): Guest Log: 2025-12-03 15:12:11,174 [wrapper] ==== wrapper stderr END ====
2025-12-03 17:02:42 (28072): Guest Log:  *** Error codes and diagnostics ***
2025-12-03 17:02:42 (28072): Guest Log:     "exeErrorCode": 0,
2025-12-03 17:02:42 (28072): Guest Log:     "exeErrorDiag": "",
2025-12-03 17:02:42 (28072): Guest Log:     "pilotErrorCode": 0,
2025-12-03 17:02:42 (28072): Guest Log:     "pilotErrorDiag": "",
2025-12-03 17:02:42 (28072): Guest Log:  *** Listing of results directory ***
2025-12-03 17:02:42 (28072): Guest Log: total 714260
2025-12-03 17:02:42 (28072): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 29 09:19 pilot3.tar.gz
2025-12-03 17:02:42 (28072): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 29 09:22 runpilot2-wrapper.sh
2025-12-03 17:02:42 (28072): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 29 09:26 queuedata.json
2025-12-03 17:02:42 (28072): Guest Log: -rwxr-xr-x. 1 atlas atlas     12028 Dec  3 04:38 init_data.xml
2025-12-03 17:02:42 (28072): Guest Log: -rwxr-xr-x. 1 atlas atlas    590126 Dec  3 04:38 input.tar.gz
2025-12-03 17:02:42 (28072): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec  3 04:38 start_atlas.sh
2025-12-03 17:02:42 (28072): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec  3 04:38 EVNT.47530775._000072.pool.root.1 -> /data/./ATLAS.root_0
2025-12-03 17:02:42 (28072): Guest Log: -rw-r--r--. 1 atlas atlas      2878 Dec  3 04:38 pandaJob.out
2025-12-03 17:02:42 (28072): Guest Log: -rw-------. 1 atlas atlas    989297 Dec  3 04:39 agis_schedconf.cvmfs.json
2025-12-03 17:02:42 (28072): Guest Log: drwx------. 5 atlas atlas      4096 Dec  3 04:39 pilot3
2025-12-03 17:02:42 (28072): Guest Log: -rw-------. 1 atlas atlas 714206127 Dec  3 15:10 HITS.47530783._000719.pool.root.1
2025-12-03 17:02:42 (28072): Guest Log: -rw-------. 1 atlas atlas        96 Dec  3 15:10 pilot_heartbeat.json
2025-12-03 17:02:42 (28072): Guest Log: -rw-------. 1 atlas atlas      1030 Dec  3 15:10 memory_monitor_summary.json
2025-12-03 17:02:42 (28072): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec  3 15:10 agis_ddmendpoints.agis.ALL.json
2025-12-03 17:02:42 (28072): Guest Log: -rw-------. 1 atlas atlas   1502088 Dec  3 15:10 log.47530783._000719.job.log.tgz.1
2025-12-03 17:02:42 (28072): Guest Log: -rw-------. 1 atlas atlas     27542 Dec  3 15:11 heartbeat.json
2025-12-03 17:02:42 (28072): Guest Log: -rw-------. 1 atlas atlas      4805 Dec  3 15:12 pilotlog.txt
2025-12-03 17:02:42 (28072): Guest Log: -rw-------. 1 atlas atlas   5157264 Dec  3 15:12 log.47530783._000719.job.log.1
2025-12-03 17:02:42 (28072): Guest Log: -rw-------. 1 atlas atlas       353 Dec  3 15:12 output.list
2025-12-03 17:02:42 (28072): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec  3 15:12 runtime_log
2025-12-03 17:02:42 (28072): Guest Log: -rw-------. 1 atlas atlas   6696960 Dec  3 15:12 result.tar.gz
2025-12-03 17:02:42 (28072): Guest Log: -rw-------. 1 atlas atlas       664 Dec  3 15:12 Z6UMDm3KWj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjqLKDmfHLCon.diag
2025-12-03 17:02:42 (28072): Guest Log: -rw-r--r--. 1 atlas atlas      8749 Dec  3 15:12 runtime_log.err
2025-12-03 17:02:42 (28072): Guest Log: Looking for outputfile HITS.47530783._000719.pool.root.1
2025-12-03 17:02:42 (28072): Guest Log: HITS file was successfully produced
2025-12-03 17:02:42 (28072): Guest Log: -rw-------. 1 atlas atlas 714206127 Dec  3 15:10 /home/atlas/RunAtlas/HITS.47530783._000719.pool.root.1
2025-12-03 17:02:43 (28072): Guest Log: Successfully finished the ATLAS job!
2025-12-03 17:02:43 (28072): Guest Log: Copying the results back to the shared directory!
2025-12-03 17:02:43 (28072): Guest Log:  *** Contents of shared directory: ***
2025-12-03 17:02:43 (28072): Guest Log: total 1074304
2025-12-03 17:02:43 (28072): Guest Log: -rwxrwxrwx. 1 root root 378557248 Dec  3 04:37 ATLAS.root_0
2025-12-03 17:02:43 (28072): Guest Log: -rwxrwxrwx. 1 root root 714206127 Dec  3 15:02 HITS.pool.root.1
2025-12-03 17:02:43 (28072): Guest Log: -rwxrwxrwx. 1 root root     12028 Dec  3 04:37 init_data.xml
2025-12-03 17:02:43 (28072): Guest Log: -rwxrwxrwx. 1 root root    590126 Dec  2 11:29 input.tar.gz
2025-12-03 17:02:43 (28072): Guest Log: -rwxrwxrwx. 1 root root   6696960 Dec  3 15:02 result.tar.gz
2025-12-03 17:02:43 (28072): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec  2 11:29 start_atlas.sh
2025-12-03 17:02:43 (28072): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-03 17:02:43 (28072): VM Completion File Detected.
2025-12-03 17:02:43 (28072): Powering off VM.
2025-12-03 17:02:43 (28072): Successfully stopped VM.
2025-12-03 17:02:43 (28072): Deregistering VM. (boinc_a1a255e9ca2e448d, slot#6)
2025-12-03 17:02:43 (28072): Removing network bandwidth throttle group from VM.
2025-12-03 17:02:44 (28072): Removing VM from VirtualBox.
2025-12-03 17:02:49 (28072): called boinc_finish(0)

</stderr_txt>
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