Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:41:10 (2408323): wrapper (7.7.26015): starting
05:41:10 (2408323): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 05:41:10] Arguments: --nthreads 8
[2025-12-02 05:41:10] Threads: 8
[2025-12-02 05:41:10] Checking for CVMFS
[2025-12-02 05:41:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 05:41:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 05:41:11] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 05:41:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 05:41:11] 2.13.2.0 2610926 17373 90764 153552 0 226 37094397 39288832 3688 16776704 0 29651089 99.978 1096972 27016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 05:41:11] CVMFS is ok
[2025-12-02 05:41:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 05:41:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 05:41:11] Further information can be found at the LHC@home message board.
[2025-12-02 05:41:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 05:41:11] Checking for apptainer binary...
[2025-12-02 05:41:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 05:41:11] Running /usr/bin/apptainer --version
[2025-12-02 05:41:11] apptainer version 1.4.4-1.el9
[2025-12-02 05:41:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 05:41:11] c-210-16.aglt2.org
[2025-12-02 05:41:11] apptainer works
[2025-12-02 05:41:11] Set ATHENA_PROC_NUMBER=8
[2025-12-02 05:41:11] Set ATHENA_CORE_NUMBER=8
[2025-12-02 05:41:11] Starting ATLAS job with PandaID=6900800251
[2025-12-02 05:41:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 14:39:21]  *** The last 200 lines of the pilot log: ***
[2025-12-02 14:39:21] 2025-12-02 19:38:14,103 | INFO     | time since job start (32212s) is within the limit (172800.0s)
[2025-12-02 14:39:21] 2025-12-02 19:38:14,476 | INFO     | monitor loop #2356: job 0:6900800251 is in state 'finished'
[2025-12-02 14:39:21] 2025-12-02 19:38:14,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 14:39:21] 2025-12-02 19:38:15,737 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 14:39:21] 2025-12-02 19:38:15,744 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2138250000003
[2025-12-02 14:39:21] 2025-12-02 19:38:15,750 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6900800251/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 14:39:21] 2025-12-02 19:38:15,751 | INFO     | extracted standard info from prmon json
[2025-12-02 14:39:21] 2025-12-02 19:38:15,751 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 14:39:21] 2025-12-02 19:38:15,751 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 14:39:21] 2025-12-02 19:38:15,761 | INFO     | fitting pss+swap vs Time
[2025-12-02 14:39:21] 2025-12-02 19:38:15,763 | INFO     | sum of square deviations: 45643474007.61933
[2025-12-02 14:39:21] 2025-12-02 19:38:15,770 | INFO     | sum of deviations: 572149587368.6936
[2025-12-02 14:39:21] 2025-12-02 19:38:15,770 | INFO     | mean x: 1764688182.6761363
[2025-12-02 14:39:21] 2025-12-02 19:38:15,770 | INFO     | mean y: 3412145.928030303
[2025-12-02 14:39:21] 2025-12-02 19:38:15,770 | INFO     | intersect: -22117288293.832893
[2025-12-02 14:39:21] 2025-12-02 19:38:15,771 | INFO     | chi2: 5.9570905157446115
[2025-12-02 14:39:21] 2025-12-02 19:38:15,772 | INFO     | sum of square deviations: 44359050382.46274
[2025-12-02 14:39:21] 2025-12-02 19:38:15,780 | INFO     | sum of deviations: 762488010861.8713
[2025-12-02 14:39:21] 2025-12-02 19:38:15,780 | INFO     | mean x: 1764688030.1778202
[2025-12-02 14:39:21] 2025-12-02 19:38:15,780 | INFO     | mean y: 3434726.7648183554
[2025-12-02 14:39:21] 2025-12-02 19:38:15,780 | INFO     | intersect: -30329799513.389294
[2025-12-02 14:39:21] 2025-12-02 19:38:15,781 | INFO     | chi2: 3.2359453634147672
[2025-12-02 14:39:21] 2025-12-02 19:38:15,781 | INFO     | current chi2=3.2359453634147672 (change=45.67909695408938 %)
[2025-12-02 14:39:21] 2025-12-02 19:38:15,782 | INFO     | sum of square deviations: 43098889353.51351
[2025-12-02 14:39:21] 2025-12-02 19:38:15,789 | INFO     | sum of deviations: 771374487050.0
[2025-12-02 14:39:21] 2025-12-02 19:38:15,789 | INFO     | mean x: 1764687877.6756756
[2025-12-02 14:39:21] 2025-12-02 19:38:15,789 | INFO     | mean y: 3435783.5714285714
[2025-12-02 14:39:21] 2025-12-02 19:38:15,789 | INFO     | intersect: -31580561550.560726
[2025-12-02 14:39:21] 2025-12-02 19:38:15,790 | INFO     | chi2: 3.1278821975399276
[2025-12-02 14:39:21] 2025-12-02 19:38:15,790 | INFO     | current chi2=3.1278821975399276 (change=3.3394620037961587 %)
[2025-12-02 14:39:21] 2025-12-02 19:38:15,791 | INFO     | right removable region: 517
[2025-12-02 14:39:21] 2025-12-02 19:38:15,791 | INFO     | sum of square deviations: 44358993652.46274
[2025-12-02 14:39:21] 2025-12-02 19:38:15,799 | INFO     | sum of deviations: 361495364478.9061
[2025-12-02 14:39:21] 2025-12-02 19:38:15,799 | INFO     | mean x: 1764688335.1778202
[2025-12-02 14:39:21] 2025-12-02 19:38:15,799 | INFO     | mean y: 3437127.2160611856
[2025-12-02 14:39:21] 2025-12-02 19:38:15,799 | INFO     | intersect: -14377562088.291695
[2025-12-02 14:39:21] 2025-12-02 19:38:15,800 | INFO     | chi2: 2.949433881558752
[2025-12-02 14:39:21] 2025-12-02 19:38:15,800 | INFO     | current chi2=2.949433881558752 (change=50.48868447166637 %)
[2025-12-02 14:39:21] 2025-12-02 19:38:15,801 | INFO     | sum of square deviations: 43098902773.51349
[2025-12-02 14:39:21] 2025-12-02 19:38:15,808 | INFO     | sum of deviations: 328903381363.89197
[2025-12-02 14:39:21] 2025-12-02 19:38:15,808 | INFO     | mean x: 1764688487.6756756
[2025-12-02 14:39:21] 2025-12-02 19:38:15,808 | INFO     | mean y: 3441066.2374517373
[2025-12-02 14:39:21] 2025-12-02 19:38:15,808 | INFO     | intersect: -13463537749.9183
[2025-12-02 14:39:21] 2025-12-02 19:38:15,809 | INFO     | chi2: 2.9168590293627883
[2025-12-02 14:39:21] 2025-12-02 19:38:15,809 | INFO     | current chi2=2.9168590293627883 (change=1.1044442257084384 %)
[2025-12-02 14:39:21] 2025-12-02 19:38:15,809 | INFO     | left removable region: 20
[2025-12-02 14:39:21] 2025-12-02 19:38:15,810 | INFO     | sum of square deviations: 38066896469.79885
[2025-12-02 14:39:21] 2025-12-02 19:38:15,816 | INFO     | sum of deviations: 495900365800.31604
[2025-12-02 14:39:21] 2025-12-02 19:38:15,816 | INFO     | mean x: 1764688457.162978
[2025-12-02 14:39:21] 2025-12-02 19:38:15,817 | INFO     | mean y: 3469402.3541247486
[2025-12-02 14:39:21] 2025-12-02 19:38:15,817 | INFO     | intersect: -22985261820.45523
[2025-12-02 14:39:21] 2025-12-02 19:38:15,817 | INFO     | chi2: 0.038883940880233066
[2025-12-02 14:39:21] 2025-12-02 19:38:15,818 | INFO     | current memory leak: 13.03 B/s (using 497 data points, chi2=0.04)
[2025-12-02 14:39:21] 2025-12-02 19:38:15,818 | INFO     | could have reported an average CPU frequency of 2605 MHz (21 samples)
[2025-12-02 14:39:21] 2025-12-02 19:38:15,819 | INFO     | ..............................
[2025-12-02 14:39:21] 2025-12-02 19:38:15,819 | INFO     | . Timing measurements:
[2025-12-02 14:39:21] 2025-12-02 19:38:15,819 | INFO     | . get job = 0 s
[2025-12-02 14:39:21] 2025-12-02 19:38:15,819 | INFO     | . initial setup = 2 s
[2025-12-02 14:39:21] 2025-12-02 19:38:15,819 | INFO     | . payload setup = 8 s
[2025-12-02 14:39:21] 2025-12-02 19:38:15,819 | INFO     | . stage-in = 0 s
[2025-12-02 14:39:21] 2025-12-02 19:38:15,819 | INFO     | . payload execution = 32176 s
[2025-12-02 14:39:21] 2025-12-02 19:38:15,819 | INFO     | . stage-out = 3 s
[2025-12-02 14:39:21] 2025-12-02 19:38:15,819 | INFO     | . log creation = 0 s
[2025-12-02 14:39:21] 2025-12-02 19:38:15,820 | INFO     | ..............................
[2025-12-02 14:39:21] 2025-12-02 19:38:15,926 | INFO     | 
[2025-12-02 14:39:21] 2025-12-02 19:38:15,926 | INFO     | job summary report
[2025-12-02 14:39:21] 2025-12-02 19:38:15,926 | INFO     | --------------------------------------------------
[2025-12-02 14:39:21] 2025-12-02 19:38:15,927 | INFO     | PanDA job id: 6900800251
[2025-12-02 14:39:21] 2025-12-02 19:38:15,927 | INFO     | task id: 47530783
[2025-12-02 14:39:21] 2025-12-02 19:38:15,927 | INFO     | errors: (none)
[2025-12-02 14:39:21] 2025-12-02 19:38:15,927 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 14:39:21] 2025-12-02 19:38:15,927 | INFO     | pilot state: finished 
[2025-12-02 14:39:21] 2025-12-02 19:38:15,927 | INFO     | transexitcode: 0
[2025-12-02 14:39:21] 2025-12-02 19:38:15,927 | INFO     | exeerrorcode: 0
[2025-12-02 14:39:21] 2025-12-02 19:38:15,927 | INFO     | exeerrordiag: 
[2025-12-02 14:39:21] 2025-12-02 19:38:15,927 | INFO     | exitcode: 0
[2025-12-02 14:39:21] 2025-12-02 19:38:15,927 | INFO     | exitmsg: OK
[2025-12-02 14:39:21] 2025-12-02 19:38:15,928 | INFO     | cpuconsumptiontime: 243659 s
[2025-12-02 14:39:21] 2025-12-02 19:38:15,928 | INFO     | nevents: 1000
[2025-12-02 14:39:21] 2025-12-02 19:38:15,928 | INFO     | neventsw: 0
[2025-12-02 14:39:21] 2025-12-02 19:38:15,928 | INFO     | pid: 2419237
[2025-12-02 14:39:21] 2025-12-02 19:38:15,928 | INFO     | pgrp: 2419237
[2025-12-02 14:39:21] 2025-12-02 19:38:15,928 | INFO     | corecount: 8
[2025-12-02 14:39:21] 2025-12-02 19:38:15,928 | INFO     | event service: False
[2025-12-02 14:39:21] 2025-12-02 19:38:15,928 | INFO     | sizes: {0: 2284278, 1: 2284477, 4: 2284739, 11: 2284767, 32188: 2343505, 32192: 2352499, 32195: 2352683, 32199: 2352929}
[2025-12-02 14:39:21] 2025-12-02 19:38:15,928 | INFO     | --------------------------------------------------
[2025-12-02 14:39:21] 2025-12-02 19:38:15,929 | INFO     | 
[2025-12-02 14:39:21] 2025-12-02 19:38:15,929 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-02 14:39:21] 2025-12-02 19:38:15,945 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,946 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,946 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,946 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,946 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,946 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,947 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,947 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,947 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,947 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,947 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,947 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,947 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,947 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,947 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,948 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,948 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 14:39:21] 2025-12-02 19:38:15,948 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,948 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 14:39:21] 2025-12-02 19:38:15,948 | INFO     | job 6900800251 has completed (purged errors)
[2025-12-02 14:39:21] 2025-12-02 19:38:15,948 | INFO     | overall cleanup function is called
[2025-12-02 14:39:21] 2025-12-02 19:38:16,965 | INFO     | --- collectZombieJob: --- 10, [2419237]
[2025-12-02 14:39:21] 2025-12-02 19:38:16,965 | INFO     | zombie collector waiting for pid 2419237
[2025-12-02 14:39:21] 2025-12-02 19:38:16,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 14:39:21] 2025-12-02 19:38:16,965 | INFO     | collected zombie processes
[2025-12-02 14:39:21] 2025-12-02 19:38:16,965 | INFO     | will attempt to kill all subprocesses of pid=2419237
[2025-12-02 14:39:21] 2025-12-02 19:38:17,208 | INFO     | process IDs to be killed: [2419237] (in reverse order)
[2025-12-02 14:39:21] 2025-12-02 19:38:17,274 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 14:39:21] 2025-12-02 19:38:17,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 14:39:21] 2025-12-02 19:38:17,281 | INFO     | did not find any defunct processes belonging to 2419237
[2025-12-02 14:39:21] 2025-12-02 19:38:17,286 | INFO     | did not find any defunct processes belonging to 2419237
[2025-12-02 14:39:21] 2025-12-02 19:38:17,288 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 14:39:21] 2025-12-02 19:38:17,288 | INFO     | ready for new job
[2025-12-02 14:39:21] 2025-12-02 19:38:17,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 14:39:21] 2025-12-02 19:38:17,291 | INFO     | ***************************************
[2025-12-02 14:39:21] 2025-12-02 19:38:17,291 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 14:39:21] 2025-12-02 19:38:17,291 | INFO     | ***************************************
[2025-12-02 14:39:21] 2025-12-02 19:38:17,292 | INFO     | 
[2025-12-02 14:39:21] 2025-12-02 19:38:17,293 | INFO     | architecture information:
[2025-12-02 14:39:21] 2025-12-02 19:38:17,294 | INFO     | executing command: cat /etc/os-release
[2025-12-02 14:39:21] 2025-12-02 19:38:17,308 | INFO     | cat /etc/os-release:
[2025-12-02 14:39:21] NAME="CentOS Linux"
[2025-12-02 14:39:21] VERSION="7 (Core)"
[2025-12-02 14:39:21] ID="centos"
[2025-12-02 14:39:21] ID_LIKE="rhel fedora"
[2025-12-02 14:39:21] VERSION_ID="7"
[2025-12-02 14:39:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 14:39:21] ANSI_COLOR="0;31"
[2025-12-02 14:39:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 14:39:21] HOME_URL="https://www.centos.org/"
[2025-12-02 14:39:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 14:39:21] 
[2025-12-02 14:39:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 14:39:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 14:39:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 14:39:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 14:39:21] 
[2025-12-02 14:39:21] 2025-12-02 19:38:17,308 | INFO     | ***************************************
[2025-12-02 14:39:21] 2025-12-02 19:38:17,811 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-02 14:39:21] 2025-12-02 19:38:17,824 | INFO     | sufficient remaining disk space (47212134400 B)
[2025-12-02 14:39:21] 2025-12-02 19:38:17,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 14:39:21] 2025-12-02 19:38:17,824 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 14:39:21] 2025-12-02 19:38:17,824 | INFO     | update_server=False
[2025-12-02 14:39:21] 2025-12-02 19:38:17,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 14:39:21] 2025-12-02 19:38:17,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 14:39:21] 2025-12-02 19:38:17,825 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 14:39:21] 2025-12-02 19:38:17,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 14:39:21] 2025-12-02 19:38:17,984 | INFO     | aborting loop
[2025-12-02 14:39:21] 2025-12-02 19:38:18,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 14:39:21] 2025-12-02 19:38:18,647 | INFO     | all payload control threads have been joined
[2025-12-02 14:39:21] 2025-12-02 19:38:18,724 | INFO     | all data control threads have been joined
[2025-12-02 14:39:21] 2025-12-02 19:38:18,830 | INFO     | [job] retrieve thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:18,830 | INFO     | [job] queue monitor thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:18,910 | INFO     | [payload] validate_post thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:18,989 | INFO     | [job] job monitor thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:19,075 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:19,266 | INFO     | all job control threads have been joined
[2025-12-02 14:39:21] 2025-12-02 19:38:19,442 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:19,470 | INFO     | [data] copytool_in thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:19,471 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:19,488 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:19,653 | INFO     | [payload] control thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:19,678 | INFO     | [payload] failed_post thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:19,730 | INFO     | [data] control thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:19,831 | INFO     | [data] copytool_out thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:20,266 | INFO     | [job] validate thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:20,271 | INFO     | [job] control thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:22,253 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 14:39:21] 2025-12-02 19:38:47,478 | INFO     | PID=2411994 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 14:39:21] 2025-12-02 19:38:47,478 | INFO     | .. there are 5 such processes running
[2025-12-02 14:39:21] 2025-12-02 19:38:47,479 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 14:39:21] 2025-12-02 19:38:47,479 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 14:39:21] 2025-12-02 19:38:47,479 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 14:39:21] 2025-12-02 19:39:15,451 | INFO     | [monitor] cgroup control has ended
[2025-12-02 14:39:21] 2025-12-02 19:39:15,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139848743786304)>', '<ExcThread(monitor, started 139847960360704)>']
[2025-12-02 14:39:21] 2025-12-02 19:39:16,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 14:39:21] 2025-12-02 19:39:16,621 | INFO     | [monitor] control thread has ended
[2025-12-02 14:39:21] 2025-12-02 19:39:20,774 | INFO     | all workflow threads have been joined
[2025-12-02 14:39:21] 2025-12-02 19:39:20,774 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 14:39:21] 2025-12-02 19:39:20,774 | INFO     | traces error code: 0
[2025-12-02 14:39:21] 2025-12-02 19:39:20,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 14:39:21] 2025-12-02 19:39:20,885 [wrapper] ==== pilot stdout END ====
[2025-12-02 14:39:21] 2025-12-02 19:39:20,887 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 14:39:21] 2025-12-02 19:39:20,890 [wrapper] pilotpid: 2411994
[2025-12-02 14:39:21] 2025-12-02 19:39:20,893 [wrapper] Pilot exit status: 0
[2025-12-02 14:39:21] 2025-12-02 19:39:20,901 [wrapper] pandaids: 6900800251
[2025-12-02 14:39:21] 2025-12-02 19:39:20,945 [wrapper] cleanup supervisor_pilot 3186507 2411995
[2025-12-02 14:39:21] 2025-12-02 19:39:20,947 [wrapper] Test setup, not cleaning
[2025-12-02 14:39:21] 2025-12-02 19:39:20,950 [wrapper] apfmon messages muted
[2025-12-02 14:39:21] 2025-12-02 19:39:20,953 [wrapper] ==== wrapper stdout END ====
[2025-12-02 14:39:21] 2025-12-02 19:39:20,955 [wrapper] ==== wrapper stderr END ====
[2025-12-02 14:39:21]  *** Error codes and diagnostics ***
[2025-12-02 14:39:21]     "exeErrorCode": 0,
[2025-12-02 14:39:21]     "exeErrorDiag": "",
[2025-12-02 14:39:21]     "pilotErrorCode": 0,
[2025-12-02 14:39:21]     "pilotErrorDiag": "",
[2025-12-02 14:39:21]  *** Listing of results directory ***
[2025-12-02 14:39:21] total 1065972
[2025-12-02 14:39:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 29 04:19 pilot3.tar.gz
[2025-12-02 14:39:21] -rwx------. 1 boincer umatlas     36292 Nov 29 04:22 runpilot2-wrapper.sh
[2025-12-02 14:39:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 29 04:26 queuedata.json
[2025-12-02 14:39:21] -rw-r--r--. 1 boincer umatlas       100 Dec  2 05:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 14:39:21] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 05:41 run_atlas
[2025-12-02 14:39:21] -rw-r--r--. 1 boincer umatlas       105 Dec  2 05:41 job.xml
[2025-12-02 14:39:21] -rw-r--r--. 2 boincer umatlas 378557248 Dec  2 05:41 EVNT.47530775._000072.pool.root.1
[2025-12-02 14:39:21] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 05:41 start_atlas.sh
[2025-12-02 14:39:21] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 05:41 shared
[2025-12-02 14:39:21] -rw-r--r--. 2 boincer umatlas    590129 Dec  2 05:41 input.tar.gz
[2025-12-02 14:39:21] -rw-r--r--. 1 boincer umatlas         0 Dec  2 05:41 boinc_lockfile
[2025-12-02 14:39:21] -rw-r--r--. 1 boincer umatlas      2878 Dec  2 05:41 pandaJob.out
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas        57 Dec  2 05:41 setup.sh.local
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas    986775 Dec  2 05:41 agis_schedconf.cvmfs.json
[2025-12-02 14:39:21] drwx------. 5 boincer umatlas      4096 Dec  2 05:41 pilot3
[2025-12-02 14:39:21] -rw-r--r--. 1 boincer umatlas       533 Dec  2 14:30 boinc_task_state.xml
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas 696141508 Dec  2 14:37 HITS.47530783._000716.pool.root.1
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas      1045 Dec  2 14:38 memory_monitor_summary.json
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas   1516240 Dec  2 14:38 agis_ddmendpoints.agis.ALL.json
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas   1907854 Dec  2 14:38 log.47530783._000716.job.log.tgz.1
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas     28021 Dec  2 14:38 heartbeat.json
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas        95 Dec  2 14:38 pilot_heartbeat.json
[2025-12-02 14:39:21] -rw-r--r--. 1 boincer umatlas      6665 Dec  2 14:39 init_data.xml
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas      4823 Dec  2 14:39 pilotlog.txt
[2025-12-02 14:39:21] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 14:39 boinc_mmap_file
[2025-12-02 14:39:21] -rw-r--r--. 1 boincer umatlas        29 Dec  2 14:39 wrapper_checkpoint.txt
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas   4545878 Dec  2 14:39 log.47530783._000716.job.log.1
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas       353 Dec  2 14:39 output.list
[2025-12-02 14:39:21] -rw-r--r--. 1 boincer umatlas       620 Dec  2 14:39 runtime_log
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas   6492160 Dec  2 14:39 result.tar.gz
[2025-12-02 14:39:21] -rw-r--r--. 1 boincer umatlas      9343 Dec  2 14:39 runtime_log.err
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas       659 Dec  2 14:39 eJQMDm3KWj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgqLKDmJosdHn.diag
[2025-12-02 14:39:21] -rw-r--r--. 1 boincer umatlas     21342 Dec  2 14:39 stderr.txt
[2025-12-02 14:39:21] HITS file was successfully produced:
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas 696141508 Dec  2 14:37 shared/HITS.pool.root.1
[2025-12-02 14:39:21]  *** Contents of shared directory: ***
[2025-12-02 14:39:21] total 1056460
[2025-12-02 14:39:21] -rw-r--r--. 2 boincer umatlas 378557248 Dec  2 05:41 ATLAS.root_0
[2025-12-02 14:39:21] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 05:41 start_atlas.sh
[2025-12-02 14:39:21] -rw-r--r--. 2 boincer umatlas    590129 Dec  2 05:41 input.tar.gz
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas 696141508 Dec  2 14:37 HITS.pool.root.1
[2025-12-02 14:39:21] -rw-------. 1 boincer umatlas   6492160 Dec  2 14:39 result.tar.gz
14:39:22 (2408323): run_atlas exited; CPU time 243474.846519
14:39:22 (2408323): called boinc_finish(0)

</stderr_txt>
]]>

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