Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:45:54 (771085): wrapper (7.7.26015): starting
07:45:54 (771085): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 07:45:54] Arguments: --nthreads 8
[2025-12-02 07:45:54] Threads: 8
[2025-12-02 07:45:54] Checking for CVMFS
[2025-12-02 07:45:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 07:45:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 07:45:54] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 07:45:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 07:45:54] 2.13.3.0 11314 38708 381304 153556 0 639 21705472 32935936 37111 16776704 0 345196679 99.654 319188325 32471 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 07:45:54] CVMFS is ok
[2025-12-02 07:45:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 07:45:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 07:45:54] Further information can be found at the LHC@home message board.
[2025-12-02 07:45:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 07:45:54] Checking for apptainer binary...
[2025-12-02 07:45:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 07:45:54] Running /usr/bin/apptainer --version
[2025-12-02 07:45:55] apptainer version 1.4.4-1.el9
[2025-12-02 07:45:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 07:45:55] c7-2-10.aglt2.org
[2025-12-02 07:45:55] apptainer works
[2025-12-02 07:45:55] Set ATHENA_PROC_NUMBER=8
[2025-12-02 07:45:55] Set ATHENA_CORE_NUMBER=8
[2025-12-02 07:45:55] Starting ATLAS job with PandaID=6904402506
[2025-12-02 07:45:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 16:03:52]  *** The last 200 lines of the pilot log: ***
[2025-12-02 16:03:52] 2025-12-02 21:03:17,569 | INFO     | time since job start (29801s) is within the limit (172800.0s)
[2025-12-02 16:03:52] 2025-12-02 21:03:17,613 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 16:03:52] 2025-12-02 21:03:17,625 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3343.103572916667
[2025-12-02 16:03:52] 2025-12-02 21:03:17,639 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6904402506/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 16:03:52] 2025-12-02 21:03:17,640 | INFO     | extracted standard info from prmon json
[2025-12-02 16:03:52] 2025-12-02 21:03:17,640 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 16:03:52] 2025-12-02 21:03:17,640 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 16:03:52] 2025-12-02 21:03:17,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-02 16:03:52] 2025-12-02 21:03:17,641 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-02 16:03:52] 2025-12-02 21:03:17,647 | INFO     | fitting pss+swap vs Time
[2025-12-02 16:03:52] 2025-12-02 21:03:17,648 | INFO     | sum of square deviations: 36036162623.18023
[2025-12-02 16:03:52] 2025-12-02 21:03:17,652 | INFO     | sum of deviations: 28111399121.01632
[2025-12-02 16:03:52] 2025-12-02 21:03:17,653 | INFO     | mean x: 1764694519.5409837
[2025-12-02 16:03:52] 2025-12-02 21:03:17,653 | INFO     | mean y: 2595529.549180328
[2025-12-02 16:03:52] 2025-12-02 21:03:17,653 | INFO     | intersect: -1374022521.718476
[2025-12-02 16:03:52] 2025-12-02 21:03:17,653 | INFO     | chi2: 2.303454483223041
[2025-12-02 16:03:52] 2025-12-02 21:03:17,654 | INFO     | sum of square deviations: 34939813283.17179
[2025-12-02 16:03:52] 2025-12-02 21:03:17,658 | INFO     | sum of deviations: 59141775262.52174
[2025-12-02 16:03:52] 2025-12-02 21:03:17,658 | INFO     | mean x: 1764694367.0414078
[2025-12-02 16:03:52] 2025-12-02 21:03:17,659 | INFO     | mean y: 2599809.1739130435
[2025-12-02 16:03:52] 2025-12-02 21:03:17,659 | INFO     | intersect: -2984455582.815482
[2025-12-02 16:03:52] 2025-12-02 21:03:17,659 | INFO     | chi2: 1.6232951525996437
[2025-12-02 16:03:52] 2025-12-02 21:03:17,659 | INFO     | current chi2=1.6232951525996437 (change=29.52779555998451 %)
[2025-12-02 16:03:52] 2025-12-02 21:03:17,660 | INFO     | sum of square deviations: 33865900260.74467
[2025-12-02 16:03:52] 2025-12-02 21:03:17,664 | INFO     | sum of deviations: 57947600715.79077
[2025-12-02 16:03:52] 2025-12-02 21:03:17,664 | INFO     | mean x: 1764694214.539749
[2025-12-02 16:03:52] 2025-12-02 21:03:17,664 | INFO     | mean y: 2599639.589958159
[2025-12-02 16:03:52] 2025-12-02 21:03:17,664 | INFO     | intersect: -3016950850.4984107
[2025-12-02 16:03:52] 2025-12-02 21:03:17,665 | INFO     | chi2: 1.623460234955751
[2025-12-02 16:03:52] 2025-12-02 21:03:17,665 | INFO     | current chi2=1.623460234955751 (change=-0.01016958350690969 %)
[2025-12-02 16:03:52] 2025-12-02 21:03:17,665 | INFO     | right removable region: 477
[2025-12-02 16:03:52] 2025-12-02 21:03:17,665 | INFO     | sum of square deviations: 34939801083.17178
[2025-12-02 16:03:52] 2025-12-02 21:03:17,670 | INFO     | sum of deviations: -50783456125.279495
[2025-12-02 16:03:52] 2025-12-02 21:03:17,670 | INFO     | mean x: 1764694672.0414078
[2025-12-02 16:03:52] 2025-12-02 21:03:17,670 | INFO     | mean y: 2606450.763975155
[2025-12-02 16:03:52] 2025-12-02 21:03:17,670 | INFO     | intersect: 2567512136.368811
[2025-12-02 16:03:52] 2025-12-02 21:03:17,671 | INFO     | chi2: 0.8086317895186645
[2025-12-02 16:03:52] 2025-12-02 21:03:17,671 | INFO     | current chi2=0.8086317895186645 (change=64.8948223024051 %)
[2025-12-02 16:03:52] 2025-12-02 21:03:17,671 | INFO     | sum of square deviations: 33865905080.6633
[2025-12-02 16:03:52] 2025-12-02 21:03:17,676 | INFO     | sum of deviations: -52149388781.39122
[2025-12-02 16:03:52] 2025-12-02 21:03:17,676 | INFO     | mean x: 1764694824.541841
[2025-12-02 16:03:52] 2025-12-02 21:03:17,676 | INFO     | mean y: 2606637.1945606694
[2025-12-02 16:03:52] 2025-12-02 21:03:17,676 | INFO     | intersect: 2720022760.175644
[2025-12-02 16:03:52] 2025-12-02 21:03:17,676 | INFO     | chi2: 0.7936036426377849
[2025-12-02 16:03:52] 2025-12-02 21:03:17,676 | INFO     | current chi2=0.7936036426377849 (change=1.8584660009254728 %)
[2025-12-02 16:03:52] 2025-12-02 21:03:17,677 | INFO     | left removable region: 20
[2025-12-02 16:03:52] 2025-12-02 21:03:17,677 | INFO     | sum of square deviations: 29595615848.20997
[2025-12-02 16:03:52] 2025-12-02 21:03:17,681 | INFO     | sum of deviations: 6617915388.216623
[2025-12-02 16:03:52] 2025-12-02 21:03:17,681 | INFO     | mean x: 1764694794.0415754
[2025-12-02 16:03:52] 2025-12-02 21:03:17,681 | INFO     | mean y: 2606758.1991247265
[2025-12-02 16:03:52] 2025-12-02 21:03:17,681 | INFO     | intersect: -391999013.5777063
[2025-12-02 16:03:52] 2025-12-02 21:03:17,682 | INFO     | chi2: 0.04942695952589603
[2025-12-02 16:03:52] 2025-12-02 21:03:17,682 | INFO     | current memory leak: 0.22 B/s (using 457 data points, chi2=0.05)
[2025-12-02 16:03:52] 2025-12-02 21:03:17,683 | INFO     | could have reported an average CPU frequency of 3331 MHz (20 samples)
[2025-12-02 16:03:52] 2025-12-02 21:03:17,683 | INFO     | ..............................
[2025-12-02 16:03:52] 2025-12-02 21:03:17,683 | INFO     | . Timing measurements:
[2025-12-02 16:03:52] 2025-12-02 21:03:17,683 | INFO     | . get job = 0 s
[2025-12-02 16:03:52] 2025-12-02 21:03:17,683 | INFO     | . initial setup = 5 s
[2025-12-02 16:03:52] 2025-12-02 21:03:17,683 | INFO     | . payload setup = 12 s
[2025-12-02 16:03:52] 2025-12-02 21:03:17,683 | INFO     | . stage-in = 0 s
[2025-12-02 16:03:52] 2025-12-02 21:03:17,683 | INFO     | . payload execution = 29726 s
[2025-12-02 16:03:52] 2025-12-02 21:03:17,683 | INFO     | . stage-out = 2 s
[2025-12-02 16:03:52] 2025-12-02 21:03:17,683 | INFO     | . log creation = 0 s
[2025-12-02 16:03:52] 2025-12-02 21:03:17,683 | INFO     | ..............................
[2025-12-02 16:03:52] 2025-12-02 21:03:17,757 | INFO     | 
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | job summary report
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | --------------------------------------------------
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | PanDA job id: 6904402506
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | task id: 47523667
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | errors: (none)
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | pilot state: finished 
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | transexitcode: 0
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | exeerrorcode: 0
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | exeerrordiag: 
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | exitcode: 0
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | exitmsg: OK
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | cpuconsumptiontime: 88775 s
[2025-12-02 16:03:52] 2025-12-02 21:03:17,758 | INFO     | nevents: 400
[2025-12-02 16:03:52] 2025-12-02 21:03:17,759 | INFO     | neventsw: 0
[2025-12-02 16:03:52] 2025-12-02 21:03:17,759 | INFO     | pid: 795729
[2025-12-02 16:03:52] 2025-12-02 21:03:17,759 | INFO     | pgrp: 795729
[2025-12-02 16:03:52] 2025-12-02 21:03:17,759 | INFO     | corecount: 8
[2025-12-02 16:03:52] 2025-12-02 21:03:17,759 | INFO     | event service: False
[2025-12-02 16:03:52] 2025-12-02 21:03:17,759 | INFO     | sizes: {0: 2283905, 1: 2283905, 11: 2283933, 22: 2284251, 33: 2284251, 29742: 2322041, 29744: 2331039, 29748: 2331095, 29756: 2331289}
[2025-12-02 16:03:52] 2025-12-02 21:03:17,759 | INFO     | --------------------------------------------------
[2025-12-02 16:03:52] 2025-12-02 21:03:17,759 | INFO     | 
[2025-12-02 16:03:52] 2025-12-02 21:03:17,759 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-02 16:03:52] 2025-12-02 21:03:17,778 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,778 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,778 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,778 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,778 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,778 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,778 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,779 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,779 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,779 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,779 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 16:03:52] 2025-12-02 21:03:17,779 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,779 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 16:03:52] 2025-12-02 21:03:17,780 | INFO     | job 6904402506 has completed (purged errors)
[2025-12-02 16:03:52] 2025-12-02 21:03:17,780 | INFO     | overall cleanup function is called
[2025-12-02 16:03:52] 2025-12-02 21:03:18,788 | INFO     | --- collectZombieJob: --- 10, [795729]
[2025-12-02 16:03:52] 2025-12-02 21:03:18,788 | INFO     | zombie collector waiting for pid 795729
[2025-12-02 16:03:52] 2025-12-02 21:03:18,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 16:03:52] 2025-12-02 21:03:18,789 | INFO     | collected zombie processes
[2025-12-02 16:03:52] 2025-12-02 21:03:18,789 | INFO     | will attempt to kill all subprocesses of pid=795729
[2025-12-02 16:03:52] 2025-12-02 21:03:19,513 | INFO     | process IDs to be killed: [795729] (in reverse order)
[2025-12-02 16:03:52] 2025-12-02 21:03:19,805 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 16:03:52] 2025-12-02 21:03:19,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 16:03:52] 2025-12-02 21:03:19,834 | INFO     | did not find any defunct processes belonging to 795729
[2025-12-02 16:03:52] 2025-12-02 21:03:19,861 | INFO     | did not find any defunct processes belonging to 795729
[2025-12-02 16:03:52] 2025-12-02 21:03:19,862 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 16:03:52] 2025-12-02 21:03:19,863 | INFO     | ready for new job
[2025-12-02 16:03:52] 2025-12-02 21:03:19,863 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 16:03:52] 2025-12-02 21:03:19,865 | INFO     | ***************************************
[2025-12-02 16:03:52] 2025-12-02 21:03:19,865 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 16:03:52] 2025-12-02 21:03:19,865 | INFO     | ***************************************
[2025-12-02 16:03:52] 2025-12-02 21:03:19,865 | INFO     | 
[2025-12-02 16:03:52] 2025-12-02 21:03:19,870 | INFO     | architecture information:
[2025-12-02 16:03:52] 2025-12-02 21:03:19,870 | INFO     | executing command: cat /etc/os-release
[2025-12-02 16:03:52] 2025-12-02 21:03:19,889 | INFO     | cat /etc/os-release:
[2025-12-02 16:03:52] NAME="CentOS Linux"
[2025-12-02 16:03:52] VERSION="7 (Core)"
[2025-12-02 16:03:52] ID="centos"
[2025-12-02 16:03:52] ID_LIKE="rhel fedora"
[2025-12-02 16:03:52] VERSION_ID="7"
[2025-12-02 16:03:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 16:03:52] ANSI_COLOR="0;31"
[2025-12-02 16:03:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 16:03:52] HOME_URL="https://www.centos.org/"
[2025-12-02 16:03:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 16:03:52] 
[2025-12-02 16:03:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 16:03:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 16:03:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 16:03:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 16:03:52] 
[2025-12-02 16:03:52] 2025-12-02 21:03:19,889 | INFO     | ***************************************
[2025-12-02 16:03:52] 2025-12-02 21:03:20,392 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-02 16:03:52] 2025-12-02 21:03:20,481 | INFO     | sufficient remaining disk space (69221744640 B)
[2025-12-02 16:03:52] 2025-12-02 21:03:20,482 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 16:03:52] 2025-12-02 21:03:20,482 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 16:03:52] 2025-12-02 21:03:20,482 | INFO     | update_server=False
[2025-12-02 16:03:52] 2025-12-02 21:03:20,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 16:03:52] 2025-12-02 21:03:20,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 16:03:52] 2025-12-02 21:03:20,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 16:03:52] 2025-12-02 21:03:20,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 16:03:52] 2025-12-02 21:03:20,487 | INFO     | aborting loop
[2025-12-02 16:03:52] 2025-12-02 21:03:20,820 | INFO     | all payload control threads have been joined
[2025-12-02 16:03:52] 2025-12-02 21:03:21,224 | INFO     | all job control threads have been joined
[2025-12-02 16:03:52] 2025-12-02 21:03:21,486 | INFO     | [job] retrieve thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:21,493 | INFO     | [job] job monitor thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:21,535 | INFO     | all data control threads have been joined
[2025-12-02 16:03:52] 2025-12-02 21:03:21,550 | INFO     | [job] validate thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:21,578 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:21,826 | INFO     | [payload] control thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:22,082 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:22,181 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:22,185 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:22,230 | INFO     | [job] control thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:22,413 | INFO     | [payload] failed_post thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:22,416 | INFO     | [data] copytool_in thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:22,495 | INFO     | [data] copytool_out thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:22,542 | INFO     | [data] control thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:22,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 16:03:52] 2025-12-02 21:03:22,837 | INFO     | [payload] validate_post thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:23,785 | INFO     | [job] queue monitor thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:24,490 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 16:03:52] 2025-12-02 21:03:29,175 | INFO     | [monitor] cgroup control has ended
[2025-12-02 16:03:52] 2025-12-02 21:03:30,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139827609896768)>', '<ExcThread(monitor, started 139827240474368)>']
[2025-12-02 16:03:52] 2025-12-02 21:03:35,679 | INFO     | all workflow threads have been joined
[2025-12-02 16:03:52] 2025-12-02 21:03:35,682 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 16:03:52] 2025-12-02 21:03:35,683 | INFO     | traces error code: 0
[2025-12-02 16:03:52] 2025-12-02 21:03:35,683 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 16:03:52] 2025-12-02 21:03:51,557 | INFO     | PID=779605 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-02 16:03:52] 2025-12-02 21:03:51,558 | INFO     | .. there are 64 such processes running
[2025-12-02 16:03:52] 2025-12-02 21:03:51,558 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 16:03:52] 2025-12-02 21:03:51,558 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 16:03:52] 2025-12-02 21:03:51,558 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 16:03:52] 2025-12-02 21:03:51,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 16:03:52] 2025-12-02 21:03:51,558 | INFO     | [monitor] control thread has ended
[2025-12-02 16:03:52] 2025-12-02 21:03:51,764 [wrapper] ==== pilot stdout END ====
[2025-12-02 16:03:52] 2025-12-02 21:03:51,767 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 16:03:52] 2025-12-02 21:03:51,769 [wrapper] pilotpid: 779605
[2025-12-02 16:03:52] 2025-12-02 21:03:51,771 [wrapper] Pilot exit status: 0
[2025-12-02 16:03:52] 2025-12-02 21:03:51,874 [wrapper] pandaids: 6904402506
[2025-12-02 16:03:52] 2025-12-02 21:03:52,058 [wrapper] cleanup supervisor_pilot 1937928 779606
[2025-12-02 16:03:52] 2025-12-02 21:03:52,061 [wrapper] Test setup, not cleaning
[2025-12-02 16:03:52] 2025-12-02 21:03:52,064 [wrapper] apfmon messages muted
[2025-12-02 16:03:52] 2025-12-02 21:03:52,066 [wrapper] ==== wrapper stdout END ====
[2025-12-02 16:03:52] 2025-12-02 21:03:52,069 [wrapper] ==== wrapper stderr END ====
[2025-12-02 16:03:52]  *** Error codes and diagnostics ***
[2025-12-02 16:03:52]     "exeErrorCode": 0,
[2025-12-02 16:03:52]     "exeErrorDiag": "",
[2025-12-02 16:03:52]     "pilotErrorCode": 0,
[2025-12-02 16:03:52]     "pilotErrorDiag": "",
[2025-12-02 16:03:52]  *** Listing of results directory ***
[2025-12-02 16:03:52] total 628348
[2025-12-02 16:03:52] -rw-r--r--. 1 boincer umatlas    576529 Nov 29 04:19 pilot3.tar.gz
[2025-12-02 16:03:52] -rwx------. 1 boincer umatlas     36292 Nov 29 04:22 runpilot2-wrapper.sh
[2025-12-02 16:03:52] -rw-r--r--. 1 boincer umatlas      5112 Nov 29 04:25 queuedata.json
[2025-12-02 16:03:52] -rw-r--r--. 1 boincer umatlas       100 Dec  2 07:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 16:03:52] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 07:45 run_atlas
[2025-12-02 16:03:52] -rw-r--r--. 1 boincer umatlas       105 Dec  2 07:45 job.xml
[2025-12-02 16:03:52] -rw-r--r--. 2 boincer umatlas 292752703 Dec  2 07:45 EVNT.47523665._000002.pool.root.1
[2025-12-02 16:03:52] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 07:45 shared
[2025-12-02 16:03:52] -rw-r--r--. 2 boincer umatlas    589961 Dec  2 07:45 input.tar.gz
[2025-12-02 16:03:52] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 07:45 start_atlas.sh
[2025-12-02 16:03:52] -rw-r--r--. 1 boincer umatlas         0 Dec  2 07:45 boinc_lockfile
[2025-12-02 16:03:52] -rw-r--r--. 1 boincer umatlas      2618 Dec  2 07:45 pandaJob.out
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas        57 Dec  2 07:45 setup.sh.local
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas    987476 Dec  2 07:46 agis_schedconf.cvmfs.json
[2025-12-02 16:03:52] drwx------. 5 boincer umatlas      4096 Dec  2 07:46 pilot3
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas 338567857 Dec  2 16:02 HITS.47523667._000130.pool.root.1
[2025-12-02 16:03:52] -rw-r--r--. 1 boincer umatlas       531 Dec  2 16:02 boinc_task_state.xml
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas      1036 Dec  2 16:03 memory_monitor_summary.json
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas   1516240 Dec  2 16:03 agis_ddmendpoints.agis.ALL.json
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas    630836 Dec  2 16:03 log.47523667._000130.job.log.tgz.1
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas        95 Dec  2 16:03 pilot_heartbeat.json
[2025-12-02 16:03:52] -rw-r--r--. 1 boincer umatlas      6946 Dec  2 16:03 init_data.xml
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas      7760 Dec  2 16:03 heartbeat.json
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas       822 Dec  2 16:03 pilotlog.txt
[2025-12-02 16:03:52] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 16:03 boinc_mmap_file
[2025-12-02 16:03:52] -rw-r--r--. 1 boincer umatlas        28 Dec  2 16:03 wrapper_checkpoint.txt
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas   3468197 Dec  2 16:03 log.47523667._000130.job.log.1
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas       357 Dec  2 16:03 output.list
[2025-12-02 16:03:52] -rw-r--r--. 1 boincer umatlas       620 Dec  2 16:03 runtime_log
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas   4116480 Dec  2 16:03 result.tar.gz
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas       658 Dec  2 16:03 Sq7LDmiKWj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmV6OKDmE7SnCn.diag
[2025-12-02 16:03:52] -rw-r--r--. 1 boincer umatlas      9338 Dec  2 16:03 runtime_log.err
[2025-12-02 16:03:52] -rw-r--r--. 1 boincer umatlas     21283 Dec  2 16:03 stderr.txt
[2025-12-02 16:03:52] HITS file was successfully produced:
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas 338567857 Dec  2 16:02 shared/HITS.pool.root.1
[2025-12-02 16:03:52]  *** Contents of shared directory: ***
[2025-12-02 16:03:52] total 621152
[2025-12-02 16:03:52] -rw-r--r--. 2 boincer umatlas 292752703 Dec  2 07:45 ATLAS.root_0
[2025-12-02 16:03:52] -rw-r--r--. 2 boincer umatlas    589961 Dec  2 07:45 input.tar.gz
[2025-12-02 16:03:52] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 07:45 start_atlas.sh
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas 338567857 Dec  2 16:02 HITS.pool.root.1
[2025-12-02 16:03:52] -rw-------. 1 boincer umatlas   4116480 Dec  2 16:03 result.tar.gz
16:03:53 (771085): run_atlas exited; CPU time 90374.639458
16:03:53 (771085): called boinc_finish(0)

</stderr_txt>
]]>

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