Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:02:22 (2819947): wrapper (7.7.26015): starting
04:02:22 (2819947): wrapper: running run_atlas (--nthreads 12)
[2025-12-06 04:02:22] Arguments: --nthreads 12
[2025-12-06 04:02:22] Threads: 12
[2025-12-06 04:02:22] Checking for CVMFS
[2025-12-06 04:02:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-06 04:02:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-06 04:02:22] Running cvmfs_config stat atlas.cern.ch
[2025-12-06 04:02:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-06 04:02:22] 2.13.0.0 2525189 19876 70156 153675 2 76 4009348 4096000 2640 130560 0 26174049 99.926 2229149 346 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-12-06 04:02:22] CVMFS is ok
[2025-12-06 04:02:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-06 04:02:22] Checking for apptainer binary...
[2025-12-06 04:02:22] apptainer is not installed, using version from CVMFS
[2025-12-06 04:02:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-06 04:02:23] dualxeon2
[2025-12-06 04:02:23] apptainer works
[2025-12-06 04:02:23] Set ATHENA_PROC_NUMBER=12
[2025-12-06 04:02:23] Set ATHENA_CORE_NUMBER=12
[2025-12-06 04:02:23] Starting ATLAS job with PandaID=6904565370
[2025-12-06 04:02:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-06 08:47:22]  *** The last 200 lines of the pilot log: ***
[2025-12-06 08:47:22] 2025-12-06 08:46:49,372 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/3/PanDA_Pilot-6904565370/memory_monitor_summary.json (trf name=prmon)
[2025-12-06 08:47:22] 2025-12-06 08:46:49,373 | INFO     | extracted standard info from prmon json
[2025-12-06 08:47:22] 2025-12-06 08:46:49,377 | INFO     | extracted standard memory fields from prmon json
[2025-12-06 08:47:22] 2025-12-06 08:46:49,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-06 08:47:22] 2025-12-06 08:46:49,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-06 08:47:22] 2025-12-06 08:46:49,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-06 08:47:22] 2025-12-06 08:46:49,388 | INFO     | fitting pss+swap vs Time
[2025-12-06 08:47:22] 2025-12-06 08:46:49,388 | INFO     | sum of square deviations: 6734191380.0
[2025-12-06 08:47:22] 2025-12-06 08:46:49,393 | INFO     | sum of deviations: 48884819402.0
[2025-12-06 08:47:22] 2025-12-06 08:46:49,394 | INFO     | mean x: 1765002256.0
[2025-12-06 08:47:22] 2025-12-06 08:46:49,394 | INFO     | mean y: 2754916.1612903224
[2025-12-06 08:47:22] 2025-12-06 08:46:49,394 | INFO     | intersect: -12809743520.537811
[2025-12-06 08:47:22] 2025-12-06 08:46:49,394 | INFO     | chi2: 2.226531900741925
[2025-12-06 08:47:22] 2025-12-06 08:46:49,399 | INFO     | sum of square deviations: 6378584712.5
[2025-12-06 08:47:22] 2025-12-06 08:46:49,401 | INFO     | sum of deviations: 69001885785.5
[2025-12-06 08:47:22] 2025-12-06 08:46:49,401 | INFO     | mean x: 1765002103.5
[2025-12-06 08:47:22] 2025-12-06 08:46:49,401 | INFO     | mean y: 2763409.7335766423
[2025-12-06 08:47:22] 2025-12-06 08:46:49,402 | INFO     | intersect: -19090574540.016865
[2025-12-06 08:47:22] 2025-12-06 08:46:49,402 | INFO     | chi2: 1.3896150807809322
[2025-12-06 08:47:22] 2025-12-06 08:46:49,402 | INFO     | current chi2=1.3896150807809322 (change=37.58835971234526 %)
[2025-12-06 08:47:22] 2025-12-06 08:46:49,403 | INFO     | sum of square deviations: 6035722470.0
[2025-12-06 08:47:22] 2025-12-06 08:46:49,405 | INFO     | sum of deviations: 67375973211.00001
[2025-12-06 08:47:22] 2025-12-06 08:46:49,409 | INFO     | mean x: 1765001951.0
[2025-12-06 08:47:22] 2025-12-06 08:46:49,409 | INFO     | mean y: 2762686.717472119
[2025-12-06 08:47:22] 2025-12-06 08:46:49,409 | INFO     | intersect: -19699721110.212105
[2025-12-06 08:47:22] 2025-12-06 08:46:49,410 | INFO     | chi2: 1.3895789688151103
[2025-12-06 08:47:22] 2025-12-06 08:46:49,410 | INFO     | current chi2=1.3895789688151103 (change=0.002598702786211715 %)
[2025-12-06 08:47:22] 2025-12-06 08:46:49,410 | INFO     | right removable region: 268
[2025-12-06 08:47:22] 2025-12-06 08:46:49,410 | INFO     | sum of square deviations: 6378584712.5
[2025-12-06 08:47:22] 2025-12-06 08:46:49,413 | INFO     | sum of deviations: 2156389985.500004
[2025-12-06 08:47:22] 2025-12-06 08:46:49,416 | INFO     | mean x: 1765002408.5
[2025-12-06 08:47:22] 2025-12-06 08:46:49,416 | INFO     | mean y: 2774804.799270073
[2025-12-06 08:47:22] 2025-12-06 08:46:49,416 | INFO     | intersect: -593914537.6835804
[2025-12-06 08:47:22] 2025-12-06 08:46:49,417 | INFO     | chi2: 0.8977258157927165
[2025-12-06 08:47:22] 2025-12-06 08:46:49,417 | INFO     | current chi2=0.8977258157927165 (change=59.68053206452707 %)
[2025-12-06 08:47:22] 2025-12-06 08:46:49,417 | INFO     | sum of square deviations: 6035722470.0
[2025-12-06 08:47:22] 2025-12-06 08:46:49,419 | INFO     | sum of deviations: -2197565930.999996
[2025-12-06 08:47:22] 2025-12-06 08:46:49,420 | INFO     | mean x: 1765002561.0
[2025-12-06 08:47:22] 2025-12-06 08:46:49,420 | INFO     | mean y: 2776716.31598513
[2025-12-06 08:47:22] 2025-12-06 08:46:49,424 | INFO     | intersect: 645402270.3337699
[2025-12-06 08:47:22] 2025-12-06 08:46:49,424 | INFO     | chi2: 0.8707385322990014
[2025-12-06 08:47:22] 2025-12-06 08:46:49,425 | INFO     | current chi2=0.8707385322990014 (change=3.00618329326806 %)
[2025-12-06 08:47:22] 2025-12-06 08:46:49,425 | INFO     | left removable region: 20
[2025-12-06 08:47:22] 2025-12-06 08:46:49,425 | INFO     | sum of square deviations: 4729621702.0
[2025-12-06 08:47:22] 2025-12-06 08:46:49,427 | INFO     | sum of deviations: 8229952615.999999
[2025-12-06 08:47:22] 2025-12-06 08:46:49,427 | INFO     | mean x: 1765002530.5
[2025-12-06 08:47:22] 2025-12-06 08:46:49,427 | INFO     | mean y: 2790216.193548387
[2025-12-06 08:47:22] 2025-12-06 08:46:49,427 | INFO     | intersect: -3068467509.766348
[2025-12-06 08:47:22] 2025-12-06 08:46:49,428 | INFO     | chi2: 0.003438526617418135
[2025-12-06 08:47:22] 2025-12-06 08:46:49,434 | INFO     | current memory leak: 1.74 B/s (using 248 data points, chi2=0.00)
[2025-12-06 08:47:22] 2025-12-06 08:46:49,435 | INFO     | could have reported an average CPU frequency of 2587 MHz (13 samples)
[2025-12-06 08:47:22] 2025-12-06 08:46:49,435 | INFO     | ..............................
[2025-12-06 08:47:22] 2025-12-06 08:46:49,435 | INFO     | . Timing measurements:
[2025-12-06 08:47:22] 2025-12-06 08:46:49,435 | INFO     | . get job = 0 s
[2025-12-06 08:47:22] 2025-12-06 08:46:49,435 | INFO     | . initial setup = 1 s
[2025-12-06 08:47:22] 2025-12-06 08:46:49,435 | INFO     | . payload setup = 5 s
[2025-12-06 08:47:22] 2025-12-06 08:46:49,435 | INFO     | . stage-in = 0 s
[2025-12-06 08:47:22] 2025-12-06 08:46:49,435 | INFO     | . payload execution = 17014 s
[2025-12-06 08:47:22] 2025-12-06 08:46:49,436 | INFO     | . stage-out = 2 s
[2025-12-06 08:47:22] 2025-12-06 08:46:49,436 | INFO     | . log creation = 0 s
[2025-12-06 08:47:22] 2025-12-06 08:46:49,436 | INFO     | ..............................
[2025-12-06 08:47:22] 2025-12-06 08:46:49,697 | INFO     | 
[2025-12-06 08:47:22] 2025-12-06 08:46:49,697 | INFO     | job summary report
[2025-12-06 08:47:22] 2025-12-06 08:46:49,697 | INFO     | --------------------------------------------------
[2025-12-06 08:47:22] 2025-12-06 08:46:49,698 | INFO     | PanDA job id: 6904565370
[2025-12-06 08:47:22] 2025-12-06 08:46:49,698 | INFO     | task id: 47523877
[2025-12-06 08:47:22] 2025-12-06 08:46:49,698 | INFO     | errors: (none)
[2025-12-06 08:47:22] 2025-12-06 08:46:49,698 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-06 08:47:22] 2025-12-06 08:46:49,698 | INFO     | pilot state: finished 
[2025-12-06 08:47:22] 2025-12-06 08:46:49,698 | INFO     | transexitcode: 0
[2025-12-06 08:47:22] 2025-12-06 08:46:49,698 | INFO     | exeerrorcode: 0
[2025-12-06 08:47:22] 2025-12-06 08:46:49,698 | INFO     | exeerrordiag: 
[2025-12-06 08:47:22] 2025-12-06 08:46:49,699 | INFO     | exitcode: 0
[2025-12-06 08:47:22] 2025-12-06 08:46:49,699 | INFO     | exitmsg: OK
[2025-12-06 08:47:22] 2025-12-06 08:46:49,699 | INFO     | cpuconsumptiontime: 127796 s
[2025-12-06 08:47:22] 2025-12-06 08:46:49,699 | INFO     | nevents: 400
[2025-12-06 08:47:22] 2025-12-06 08:46:49,699 | INFO     | neventsw: 0
[2025-12-06 08:47:22] 2025-12-06 08:46:49,699 | INFO     | pid: 2830447
[2025-12-06 08:47:22] 2025-12-06 08:46:49,699 | INFO     | pgrp: 2830447
[2025-12-06 08:47:22] 2025-12-06 08:46:49,699 | INFO     | corecount: 12
[2025-12-06 08:47:22] 2025-12-06 08:46:49,700 | INFO     | event service: False
[2025-12-06 08:47:22] 2025-12-06 08:46:49,700 | INFO     | sizes: {0: 2283774, 1: 2283973, 4: 2284235, 11: 2284263, 17024: 2316258, 17026: 2325302, 17029: 2325486, 17042: 2325680}
[2025-12-06 08:47:22] 2025-12-06 08:46:49,700 | INFO     | --------------------------------------------------
[2025-12-06 08:47:22] 2025-12-06 08:46:49,700 | INFO     | 
[2025-12-06 08:47:22] 2025-12-06 08:46:49,700 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/3
[2025-12-06 08:47:22] 2025-12-06 08:46:49,735 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,735 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,735 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,735 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,735 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,736 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,736 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,736 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,736 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,736 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,737 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,737 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,737 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,737 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-06 08:47:22] 2025-12-06 08:46:49,737 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,737 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-06 08:47:22] 2025-12-06 08:46:49,737 | INFO     | job 6904565370 has completed (purged errors)
[2025-12-06 08:47:22] 2025-12-06 08:46:49,738 | INFO     | overall cleanup function is called
[2025-12-06 08:47:22] 2025-12-06 08:46:50,752 | INFO     | --- collectZombieJob: --- 10, [2830447]
[2025-12-06 08:47:22] 2025-12-06 08:46:50,752 | INFO     | zombie collector waiting for pid 2830447
[2025-12-06 08:47:22] 2025-12-06 08:46:50,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-06 08:47:22] 2025-12-06 08:46:50,753 | INFO     | collected zombie processes
[2025-12-06 08:47:22] 2025-12-06 08:46:50,753 | INFO     | will attempt to kill all subprocesses of pid=2830447
[2025-12-06 08:47:22] 2025-12-06 08:46:51,114 | INFO     | process IDs to be killed: [2830447] (in reverse order)
[2025-12-06 08:47:22] 2025-12-06 08:46:51,234 | WARNING  | found no corresponding commands to process id(s)
[2025-12-06 08:47:22] 2025-12-06 08:46:51,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-06 08:47:22] 2025-12-06 08:46:51,248 | INFO     | did not find any defunct processes belonging to 2830447
[2025-12-06 08:47:22] 2025-12-06 08:46:51,254 | INFO     | did not find any defunct processes belonging to 2830447
[2025-12-06 08:47:22] 2025-12-06 08:46:51,262 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-06 08:47:22] 2025-12-06 08:46:51,262 | INFO     | ready for new job
[2025-12-06 08:47:22] 2025-12-06 08:46:51,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-06 08:47:22] 2025-12-06 08:46:51,265 | INFO     | ***************************************
[2025-12-06 08:47:22] 2025-12-06 08:46:51,268 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-06 08:47:22] 2025-12-06 08:46:51,268 | INFO     | ***************************************
[2025-12-06 08:47:22] 2025-12-06 08:46:51,268 | INFO     | 
[2025-12-06 08:47:22] 2025-12-06 08:46:51,270 | INFO     | architecture information:
[2025-12-06 08:47:22] 2025-12-06 08:46:51,274 | INFO     | executing command: cat /etc/os-release
[2025-12-06 08:47:22] 2025-12-06 08:46:51,298 | INFO     | cat /etc/os-release:
[2025-12-06 08:47:22] NAME="CentOS Linux"
[2025-12-06 08:47:22] VERSION="7 (Core)"
[2025-12-06 08:47:22] ID="centos"
[2025-12-06 08:47:22] ID_LIKE="rhel fedora"
[2025-12-06 08:47:22] VERSION_ID="7"
[2025-12-06 08:47:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-06 08:47:22] ANSI_COLOR="0;31"
[2025-12-06 08:47:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-06 08:47:22] HOME_URL="https://www.centos.org/"
[2025-12-06 08:47:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-06 08:47:22] 
[2025-12-06 08:47:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-06 08:47:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-06 08:47:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-06 08:47:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-06 08:47:22] 
[2025-12-06 08:47:22] 2025-12-06 08:46:51,299 | INFO     | ***************************************
[2025-12-06 08:47:22] 2025-12-06 08:46:51,801 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/3
[2025-12-06 08:47:22] 2025-12-06 08:46:51,829 | INFO     | sufficient remaining disk space (91614085120 B)
[2025-12-06 08:47:22] 2025-12-06 08:46:51,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-06 08:47:22] 2025-12-06 08:46:51,830 | INFO     | current server update state: UPDATING_FINAL
[2025-12-06 08:47:22] 2025-12-06 08:46:51,830 | INFO     | update_server=False
[2025-12-06 08:47:22] 2025-12-06 08:46:51,830 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-06 08:47:22] 2025-12-06 08:46:52,010 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-06 08:47:22] 2025-12-06 08:46:52,010 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-06 08:47:22] 2025-12-06 08:46:52,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-06 08:47:22] 2025-12-06 08:46:52,011 | INFO     | will abort loop
[2025-12-06 08:47:22] 2025-12-06 08:46:52,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-06 08:47:22] 2025-12-06 08:46:52,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-06 08:47:22] 2025-12-06 08:46:52,835 | INFO     | [job] retrieve thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:52,838 | INFO     | [job] create_data_payload thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:52,862 | INFO     | [payload] validate_pre thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:52,879 | INFO     | all data control threads have been joined
[2025-12-06 08:47:22] 2025-12-06 08:46:52,930 | INFO     | all payload control threads have been joined
[2025-12-06 08:47:22] 2025-12-06 08:46:53,016 | INFO     | [job] job monitor thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:53,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:53,219 | INFO     | all job control threads have been joined
[2025-12-06 08:47:22] 2025-12-06 08:46:53,541 | INFO     | [payload] validate_post thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:53,577 | INFO     | [payload] execute_payloads thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:53,829 | INFO     | [data] copytool_in thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:53,833 | INFO     | [job] validate thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:53,884 | INFO     | [data] control thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:53,935 | INFO     | [payload] control thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:54,053 | INFO     | [payload] failed_post thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:54,224 | INFO     | [job] control thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:54,321 | INFO     | [data] copytool_out thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:54,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-06 08:47:22] 2025-12-06 08:46:55,601 | INFO     | [job] queue monitor thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:46:56,291 | INFO     | [data] queue_monitor thread has finished
[2025-12-06 08:47:22] 2025-12-06 08:47:00,736 | INFO     | [monitor] cgroup control has ended
[2025-12-06 08:47:22] 2025-12-06 08:47:02,673 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139930501654336)>', '<ExcThread(monitor, started 139930000930560)>']
[2025-12-06 08:47:22] 2025-12-06 08:47:07,698 | INFO     | all workflow threads have been joined
[2025-12-06 08:47:22] 2025-12-06 08:47:07,698 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-06 08:47:22] 2025-12-06 08:47:07,699 | INFO     | traces error code: 0
[2025-12-06 08:47:22] 2025-12-06 08:47:07,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-06 08:47:22] 2025-12-06 08:47:20,714 | INFO     | 17059s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-06 08:47:22] 2025-12-06 08:47:22,048 | INFO     | PID=2823788 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-06 08:47:22] 2025-12-06 08:47:22,052 | INFO     | .. there are 4 such processes running
[2025-12-06 08:47:22] 2025-12-06 08:47:22,052 | INFO     | found 0 job(s) in 20 queues
[2025-12-06 08:47:22] 2025-12-06 08:47:22,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-06 08:47:22] 2025-12-06 08:47:22,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-06 08:47:22] 2025-12-06 08:47:22,052 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-06 08:47:22] 2025-12-06 08:47:22,052 | INFO     | [monitor] control thread has ended
[2025-12-06 08:47:22] 2025-12-06 08:47:22,219 [wrapper] ==== pilot stdout END ====
[2025-12-06 08:47:22] 2025-12-06 08:47:22,225 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-06 08:47:22] 2025-12-06 08:47:22,230 [wrapper] pilotpid: 2823788
[2025-12-06 08:47:22] 2025-12-06 08:47:22,236 [wrapper] Pilot exit status: 0
[2025-12-06 08:47:22] 2025-12-06 08:47:22,261 [wrapper] pandaids: 6904565370
[2025-12-06 08:47:22] 2025-12-06 08:47:22,334 [wrapper] cleanup supervisor_pilot 2920576 2823789
[2025-12-06 08:47:22] 2025-12-06 08:47:22,339 [wrapper] Test setup, not cleaning
[2025-12-06 08:47:22] 2025-12-06 08:47:22,344 [wrapper] apfmon messages muted
[2025-12-06 08:47:22] 2025-12-06 08:47:22,350 [wrapper] ==== wrapper stdout END ====
[2025-12-06 08:47:22] 2025-12-06 08:47:22,357 [wrapper] ==== wrapper stderr END ====
[2025-12-06 08:47:22]  *** Error codes and diagnostics ***
[2025-12-06 08:47:22]     "exeErrorCode": 0,
[2025-12-06 08:47:22]     "exeErrorDiag": "",
[2025-12-06 08:47:22]     "pilotErrorCode": 0,
[2025-12-06 08:47:22]     "pilotErrorDiag": "",
[2025-12-06 08:47:22]  *** Listing of results directory ***
[2025-12-06 08:47:22] total 622480
[2025-12-06 08:47:22] -rw-r--r-- 1 boinc boinc    576529 Nov 29 09:19 pilot3.tar.gz
[2025-12-06 08:47:22] -rwx------ 1 boinc boinc     36292 Nov 29 09:22 runpilot2-wrapper.sh
[2025-12-06 08:47:22] -rw-r--r-- 1 boinc boinc      5112 Nov 29 09:25 queuedata.json
[2025-12-06 08:47:22] -rw-rw-r-- 1 boinc boinc       100 Dez  6 04:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-06 08:47:22] -rwxr-xr-x 1 boinc boinc      7986 Dez  6 04:02 run_atlas
[2025-12-06 08:47:22] -rw-rw-r-- 1 boinc boinc       105 Dez  6 04:02 job.xml
[2025-12-06 08:47:22] -rw-r--r-- 2 boinc boinc 304186420 Dez  6 04:02 EVNT.47523873._000001.pool.root.1
[2025-12-06 08:47:22] -rw-rw-r-- 1 boinc boinc      6623 Dez  6 04:02 init_data.xml
[2025-12-06 08:47:22] -rw-r--r-- 2 boinc boinc     15847 Dez  6 04:02 start_atlas.sh
[2025-12-06 08:47:22] drwxrwx--x 2 boinc boinc      4096 Dez  6 04:02 shared
[2025-12-06 08:47:22] -rw-r--r-- 2 boinc boinc    589970 Dez  6 04:02 input.tar.gz
[2025-12-06 08:47:22] -rw-rw-r-- 1 boinc boinc         0 Dez  6 04:02 boinc_lockfile
[2025-12-06 08:47:22] -rw-rw-r-- 1 boinc boinc      2638 Dez  6 04:02 pandaJob.out
[2025-12-06 08:47:22] -rw------- 1 boinc boinc    985860 Dez  6 04:02 agis_schedconf.cvmfs.json
[2025-12-06 08:47:22] drwx------ 5 boinc boinc      4096 Dez  6 04:02 pilot3
[2025-12-06 08:47:22] -rw------- 1 boinc boinc 323324159 Dez  6 08:45 HITS.47523877._000133.pool.root.1
[2025-12-06 08:47:22] -rw-rw-r-- 1 boinc boinc       531 Dez  6 08:45 boinc_task_state.xml
[2025-12-06 08:47:22] -rw------- 1 boinc boinc      1024 Dez  6 08:46 memory_monitor_summary.json
[2025-12-06 08:47:22] -rw------- 1 boinc boinc   1516240 Dez  6 08:46 agis_ddmendpoints.agis.ALL.json
[2025-12-06 08:47:22] -rw------- 1 boinc boinc    559830 Dez  6 08:46 log.47523877._000133.job.log.tgz.1
[2025-12-06 08:47:22] -rw------- 1 boinc boinc        95 Dez  6 08:46 pilot_heartbeat.json
[2025-12-06 08:47:22] -rw------- 1 boinc boinc      7762 Dez  6 08:46 heartbeat.json
[2025-12-06 08:47:22] -rw-rw-r-- 1 boinc boinc      8192 Dez  6 08:47 boinc_mmap_file
[2025-12-06 08:47:22] -rw-rw-r-- 1 boinc boinc        29 Dez  6 08:47 wrapper_checkpoint.txt
[2025-12-06 08:47:22] -rw------- 1 boinc boinc       938 Dez  6 08:47 pilotlog.txt
[2025-12-06 08:47:22] -rw------- 1 boinc boinc   2442431 Dez  6 08:47 log.47523877._000133.job.log.1
[2025-12-06 08:47:22] -rw------- 1 boinc boinc       357 Dez  6 08:47 output.list
[2025-12-06 08:47:22] -rw-rw-r-- 1 boinc boinc       620 Dez  6 08:47 runtime_log
[2025-12-06 08:47:22] -rw------- 1 boinc boinc   3020800 Dez  6 08:47 result.tar.gz
[2025-12-06 08:47:22] -rw-rw-r-- 1 boinc boinc      9173 Dez  6 08:47 runtime_log.err
[2025-12-06 08:47:22] -rw------- 1 boinc boinc       659 Dez  6 08:47 mZ2NDmsKWj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9oLKDmgvuiVn.diag
[2025-12-06 08:47:22] -rw-rw-r-- 1 boinc boinc     21025 Dez  6 08:47 stderr.txt
[2025-12-06 08:47:22] HITS file was successfully produced:
[2025-12-06 08:47:22] -rw------- 1 boinc boinc 323324159 Dez  6 08:45 shared/HITS.pool.root.1
[2025-12-06 08:47:22]  *** Contents of shared directory: ***
[2025-12-06 08:47:22] total 616364
[2025-12-06 08:47:22] -rw-r--r-- 2 boinc boinc 304186420 Dez  6 04:02 ATLAS.root_0
[2025-12-06 08:47:22] -rw-r--r-- 2 boinc boinc     15847 Dez  6 04:02 start_atlas.sh
[2025-12-06 08:47:22] -rw-r--r-- 2 boinc boinc    589970 Dez  6 04:02 input.tar.gz
[2025-12-06 08:47:22] -rw------- 1 boinc boinc 323324159 Dez  6 08:45 HITS.pool.root.1
[2025-12-06 08:47:22] -rw------- 1 boinc boinc   3020800 Dez  6 08:47 result.tar.gz
08:47:24 (2819947): run_atlas exited; CPU time 128094.701592
08:47:24 (2819947): called boinc_finish(0)

</stderr_txt>
]]>

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