Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:06:38 (2808422): wrapper (7.7.26015): starting
04:06:38 (2808422): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 04:06:38] Arguments: --nthreads 8
[2025-12-02 04:06:38] Threads: 8
[2025-12-02 04:06:38] Checking for CVMFS
[2025-12-02 04:06:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 04:06:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 04:06:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 04:06:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 04:06:39] 2.13.2.0 5195 45003 163220 153549 0 373 36040056 40960000 22759 16776704 0 98536639 99.760 56154261 37279 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 04:06:39] CVMFS is ok
[2025-12-02 04:06:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 04:06:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 04:06:39] Further information can be found at the LHC@home message board.
[2025-12-02 04:06:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 04:06:39] Checking for apptainer binary...
[2025-12-02 04:06:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 04:06:39] Running /usr/bin/apptainer --version
[2025-12-02 04:06:39] apptainer version 1.4.4-1.el9
[2025-12-02 04:06:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 04:06:40] c-212-19.aglt2.org
[2025-12-02 04:06:40] apptainer works
[2025-12-02 04:06:40] Set ATHENA_PROC_NUMBER=8
[2025-12-02 04:06:40] Set ATHENA_CORE_NUMBER=8
[2025-12-02 04:06:40] Starting ATLAS job with PandaID=6897834960
[2025-12-02 04:06:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 17:14:26]  *** The last 200 lines of the pilot log: ***
[2025-12-02 17:14:47] 2025-12-02 22:13:53,999 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 17:14:47] 2025-12-02 22:13:53,999 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 17:14:47] 2025-12-02 22:13:54,014 | INFO     | fitting pss+swap vs Time
[2025-12-02 17:14:47] 2025-12-02 22:13:54,016 | INFO     | sum of square deviations: 143775790623.58173
[2025-12-02 17:14:47] 2025-12-02 22:13:54,028 | INFO     | sum of deviations: 655241861490.6967
[2025-12-02 17:14:47] 2025-12-02 22:13:54,028 | INFO     | mean x: 1764690031.9767442
[2025-12-02 17:14:47] 2025-12-02 22:13:54,028 | INFO     | mean y: 3356524.3720930233
[2025-12-02 17:14:47] 2025-12-02 22:13:54,028 | INFO     | intersect: -8039018179.265015
[2025-12-02 17:14:47] 2025-12-02 22:13:54,029 | INFO     | chi2: 12.12707983945008
[2025-12-02 17:14:47] 2025-12-02 22:13:54,030 | INFO     | sum of square deviations: 141007886160.21094
[2025-12-02 17:14:47] 2025-12-02 22:13:54,042 | INFO     | sum of deviations: 961678295013.0211
[2025-12-02 17:14:47] 2025-12-02 22:13:54,042 | INFO     | mean x: 1764689879.492848
[2025-12-02 17:14:47] 2025-12-02 22:13:54,042 | INFO     | mean y: 3373401.9128738623
[2025-12-02 17:14:47] 2025-12-02 22:13:54,043 | INFO     | intersect: -12031868035.642174
[2025-12-02 17:14:47] 2025-12-02 22:13:54,043 | INFO     | chi2: 8.748318578623268
[2025-12-02 17:14:47] 2025-12-02 22:13:54,044 | INFO     | current chi2=8.748318578623268 (change=27.86129311885545 %)
[2025-12-02 17:14:47] 2025-12-02 22:13:54,044 | INFO     | sum of square deviations: 138275749808.93585
[2025-12-02 17:14:47] 2025-12-02 22:13:54,055 | INFO     | sum of deviations: 1253572720053.9556
[2025-12-02 17:14:47] 2025-12-02 22:13:54,056 | INFO     | mean x: 1764689727.0091622
[2025-12-02 17:14:47] 2025-12-02 22:13:54,056 | INFO     | mean y: 3389693.14921466
[2025-12-02 17:14:47] 2025-12-02 22:13:54,056 | INFO     | intersect: -15994837792.110025
[2025-12-02 17:14:47] 2025-12-02 22:13:54,057 | INFO     | chi2: 5.75875436982264
[2025-12-02 17:14:47] 2025-12-02 22:13:54,057 | INFO     | current chi2=5.75875436982264 (change=34.1730148706027 %)
[2025-12-02 17:14:47] 2025-12-02 22:13:54,058 | INFO     | sum of square deviations: 135579149007.24886
[2025-12-02 17:14:47] 2025-12-02 22:13:54,069 | INFO     | sum of deviations: 1537057926084.2646
[2025-12-02 17:14:47] 2025-12-02 22:13:54,070 | INFO     | mean x: 1764689574.5256917
[2025-12-02 17:14:47] 2025-12-02 22:13:54,070 | INFO     | mean y: 3405714.7812911724
[2025-12-02 17:14:47] 2025-12-02 22:13:54,070 | INFO     | intersect: -20002842424.87889
[2025-12-02 17:14:47] 2025-12-02 22:13:54,071 | INFO     | chi2: 2.8639537106803408
[2025-12-02 17:14:47] 2025-12-02 22:13:54,071 | INFO     | current chi2=2.8639537106803408 (change=50.26782656874206 %)
[2025-12-02 17:14:47] 2025-12-02 22:13:54,072 | INFO     | sum of square deviations: 132917805141.72539
[2025-12-02 17:14:47] 2025-12-02 22:13:54,083 | INFO     | sum of deviations: 1624971347373.0227
[2025-12-02 17:14:47] 2025-12-02 22:13:54,083 | INFO     | mean x: 1764689422.041114
[2025-12-02 17:14:47] 2025-12-02 22:13:54,083 | INFO     | mean y: 3410737.450928382
[2025-12-02 17:14:47] 2025-12-02 22:13:54,084 | INFO     | intersect: -21570596934.218685
[2025-12-02 17:14:47] 2025-12-02 22:13:54,084 | INFO     | chi2: 2.322044325228873
[2025-12-02 17:14:47] 2025-12-02 22:13:54,085 | INFO     | current chi2=2.322044325228873 (change=18.92172291160165 %)
[2025-12-02 17:14:47] 2025-12-02 22:13:54,085 | INFO     | right removable region: 753
[2025-12-02 17:14:47] 2025-12-02 22:13:54,085 | INFO     | sum of square deviations: 141006810736.17673
[2025-12-02 17:14:47] 2025-12-02 22:13:54,106 | INFO     | sum of deviations: 410566139444.88947
[2025-12-02 17:14:47] 2025-12-02 22:13:54,106 | INFO     | mean x: 1764690184.490247
[2025-12-02 17:14:47] 2025-12-02 22:13:54,106 | INFO     | mean y: 3369978.318595579
[2025-12-02 17:14:47] 2025-12-02 22:13:54,106 | INFO     | intersect: -5134835989.037328
[2025-12-02 17:14:47] 2025-12-02 22:13:54,107 | INFO     | chi2: 9.951637839496152
[2025-12-02 17:14:47] 2025-12-02 22:13:54,107 | INFO     | current chi2=9.951637839496152 (change=17.938712606451972 %)
[2025-12-02 17:14:47] 2025-12-02 22:13:54,107 | INFO     | left removable region: 10
[2025-12-02 17:14:47] 2025-12-02 22:13:54,108 | INFO     | sum of square deviations: 127185192224.94203
[2025-12-02 17:14:47] 2025-12-02 22:13:54,129 | INFO     | sum of deviations: 1329802264559.3855
[2025-12-02 17:14:47] 2025-12-02 22:13:54,129 | INFO     | mean x: 1764689696.5329745
[2025-12-02 17:14:47] 2025-12-02 22:13:54,129 | INFO     | mean y: 3427299.943472409
[2025-12-02 17:14:47] 2025-12-02 22:13:54,129 | INFO     | intersect: -18447528457.10542
[2025-12-02 17:14:47] 2025-12-02 22:13:54,130 | INFO     | chi2: 0.04349502544112544
[2025-12-02 17:14:47] 2025-12-02 22:13:54,130 | INFO     | current memory leak: 10.46 B/s (using 743 data points, chi2=0.04)
[2025-12-02 17:14:47] 2025-12-02 22:13:54,131 | INFO     | could have reported an average CPU frequency of 3088 MHz (29 samples)
[2025-12-02 17:14:47] 2025-12-02 22:13:54,132 | INFO     | ..............................
[2025-12-02 17:14:47] 2025-12-02 22:13:54,132 | INFO     | . Timing measurements:
[2025-12-02 17:14:47] 2025-12-02 22:13:54,132 | INFO     | . get job = 0 s
[2025-12-02 17:14:47] 2025-12-02 22:13:54,132 | INFO     | . initial setup = 2 s
[2025-12-02 17:14:47] 2025-12-02 22:13:54,132 | INFO     | . payload setup = 15 s
[2025-12-02 17:14:47] 2025-12-02 22:13:54,132 | INFO     | . stage-in = 0 s
[2025-12-02 17:14:47] 2025-12-02 22:13:54,132 | INFO     | . payload execution = 47173 s
[2025-12-02 17:14:47] 2025-12-02 22:13:54,132 | INFO     | . stage-out = 4 s
[2025-12-02 17:14:47] 2025-12-02 22:13:54,132 | INFO     | . log creation = 0 s
[2025-12-02 17:14:47] 2025-12-02 22:13:54,132 | INFO     | ..............................
[2025-12-02 17:14:47] 2025-12-02 22:13:54,368 | INFO     | 
[2025-12-02 17:14:47] 2025-12-02 22:13:54,368 | INFO     | job summary report
[2025-12-02 17:14:47] 2025-12-02 22:13:54,368 | INFO     | --------------------------------------------------
[2025-12-02 17:14:47] 2025-12-02 22:13:54,368 | INFO     | PanDA job id: 6897834960
[2025-12-02 17:14:47] 2025-12-02 22:13:54,368 | INFO     | task id: 47531058
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | errors: (none)
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | pilot state: finished 
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | transexitcode: 0
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | exeerrorcode: 0
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | exeerrordiag: 
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | exitcode: 0
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | exitmsg: OK
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | cpuconsumptiontime: 177294 s
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | nevents: 1000
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | neventsw: 0
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | pid: 2822035
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | pgrp: 2822035
[2025-12-02 17:14:47] 2025-12-02 22:13:54,369 | INFO     | corecount: 8
[2025-12-02 17:14:47] 2025-12-02 22:13:54,370 | INFO     | event service: False
[2025-12-02 17:14:47] 2025-12-02 22:13:54,370 | INFO     | sizes: {0: 2284283, 1: 2284482, 6: 2284744, 11: 2284772, 47189: 2351946, 47190: 2351945, 47194: 2361179, 47202: 2361369}
[2025-12-02 17:14:47] 2025-12-02 22:13:54,370 | INFO     | --------------------------------------------------
[2025-12-02 17:14:47] 2025-12-02 22:13:54,370 | INFO     | 
[2025-12-02 17:14:47] 2025-12-02 22:13:54,370 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-02 17:14:47] 2025-12-02 22:13:54,395 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,396 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,396 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,396 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,396 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,396 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,397 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 17:14:47] 2025-12-02 22:13:54,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,397 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 17:14:47] 2025-12-02 22:13:54,397 | INFO     | job 6897834960 has completed (purged errors)
[2025-12-02 17:14:47] 2025-12-02 22:13:54,397 | INFO     | overall cleanup function is called
[2025-12-02 17:14:47] 2025-12-02 22:13:55,415 | INFO     | --- collectZombieJob: --- 10, [2822035]
[2025-12-02 17:14:47] 2025-12-02 22:13:55,415 | INFO     | zombie collector waiting for pid 2822035
[2025-12-02 17:14:47] 2025-12-02 22:13:55,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 17:14:47] 2025-12-02 22:13:55,415 | INFO     | collected zombie processes
[2025-12-02 17:14:47] 2025-12-02 22:13:55,415 | INFO     | will attempt to kill all subprocesses of pid=2822035
[2025-12-02 17:14:47] 2025-12-02 22:13:55,814 | INFO     | process IDs to be killed: [2822035] (in reverse order)
[2025-12-02 17:14:47] 2025-12-02 22:13:55,961 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 17:14:47] 2025-12-02 22:13:55,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 17:14:47] 2025-12-02 22:13:55,980 | INFO     | did not find any defunct processes belonging to 2822035
[2025-12-02 17:14:47] 2025-12-02 22:13:55,997 | INFO     | did not find any defunct processes belonging to 2822035
[2025-12-02 17:14:47] 2025-12-02 22:13:55,999 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 17:14:47] 2025-12-02 22:13:55,999 | INFO     | ready for new job
[2025-12-02 17:14:47] 2025-12-02 22:13:55,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 17:14:47] 2025-12-02 22:13:56,004 | INFO     | ***************************************
[2025-12-02 17:14:47] 2025-12-02 22:13:56,004 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 17:14:47] 2025-12-02 22:13:56,004 | INFO     | ***************************************
[2025-12-02 17:14:47] 2025-12-02 22:13:56,004 | INFO     | 
[2025-12-02 17:14:47] 2025-12-02 22:13:56,010 | INFO     | architecture information:
[2025-12-02 17:14:47] 2025-12-02 22:13:56,010 | INFO     | executing command: cat /etc/os-release
[2025-12-02 17:14:47] 2025-12-02 22:13:56,046 | INFO     | cat /etc/os-release:
[2025-12-02 17:14:47] NAME="CentOS Linux"
[2025-12-02 17:14:47] VERSION="7 (Core)"
[2025-12-02 17:14:47] ID="centos"
[2025-12-02 17:14:47] ID_LIKE="rhel fedora"
[2025-12-02 17:14:47] VERSION_ID="7"
[2025-12-02 17:14:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 17:14:47] ANSI_COLOR="0;31"
[2025-12-02 17:14:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 17:14:47] HOME_URL="https://www.centos.org/"
[2025-12-02 17:14:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 17:14:47] 
[2025-12-02 17:14:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 17:14:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 17:14:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 17:14:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 17:14:47] 
[2025-12-02 17:14:47] 2025-12-02 22:13:56,046 | INFO     | ***************************************
[2025-12-02 17:14:47] 2025-12-02 22:13:56,551 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-02 17:14:47] 2025-12-02 22:13:56,581 | INFO     | sufficient remaining disk space (124108406784 B)
[2025-12-02 17:14:47] 2025-12-02 22:13:56,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 17:14:47] 2025-12-02 22:13:56,582 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 17:14:47] 2025-12-02 22:13:56,582 | INFO     | update_server=False
[2025-12-02 17:14:47] 2025-12-02 22:13:56,582 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 17:14:47] 2025-12-02 22:13:56,582 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 17:14:47] 2025-12-02 22:13:56,731 | INFO     | all payload control threads have been joined
[2025-12-02 17:14:47] 2025-12-02 22:13:56,792 | INFO     | all data control threads have been joined
[2025-12-02 17:14:47] 2025-12-02 22:13:56,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 17:14:47] 2025-12-02 22:13:57,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 17:14:47] 2025-12-02 22:13:57,009 | INFO     | aborting loop
[2025-12-02 17:14:47] 2025-12-02 22:13:57,274 | INFO     | all job control threads have been joined
[2025-12-02 17:14:47] 2025-12-02 22:13:57,590 | INFO     | [job] retrieve thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:57,737 | INFO     | [payload] control thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:57,765 | INFO     | [job] validate thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:57,799 | INFO     | [data] control thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:57,966 | INFO     | [data] copytool_in thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:58,014 | INFO     | [job] job monitor thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:58,281 | INFO     | [job] control thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:58,367 | INFO     | [payload] failed_post thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:58,428 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:58,467 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:58,602 | INFO     | [data] copytool_out thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:58,695 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:58,882 | INFO     | [payload] validate_post thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:58,977 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:13:59,223 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 17:14:47] 2025-12-02 22:14:00,229 | INFO     | [job] queue monitor thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:14:00,982 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 17:14:47] 2025-12-02 22:14:17,096 | INFO     | [monitor] cgroup control has ended
[2025-12-02 17:14:47] 2025-12-02 22:14:17,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911355488064)>', '<ExcThread(monitor, started 139910480643840)>']
[2025-12-02 17:14:47] 2025-12-02 22:14:22,130 | INFO     | all workflow threads have been joined
[2025-12-02 17:14:47] 2025-12-02 22:14:22,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 17:14:47] 2025-12-02 22:14:22,130 | INFO     | traces error code: 0
[2025-12-02 17:14:47] 2025-12-02 22:14:22,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 17:14:47] 2025-12-02 22:14:26,204 | INFO     | PID=2812485 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 17:14:47] 2025-12-02 22:14:26,204 | INFO     | .. there are 17 such processes running
[2025-12-02 17:14:47] 2025-12-02 22:14:26,204 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 17:14:47] 2025-12-02 22:14:26,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 17:14:47] 2025-12-02 22:14:26,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 17:14:47] 2025-12-02 22:14:26,205 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 17:14:47] 2025-12-02 22:14:26,205 | INFO     | [monitor] control thread has ended
[2025-12-02 17:14:47] 2025-12-02 22:14:26,378 [wrapper] ==== pilot stdout END ====
[2025-12-02 17:14:47] 2025-12-02 22:14:26,386 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 17:14:47] 2025-12-02 22:14:26,391 [wrapper] pilotpid: 2812485
[2025-12-02 17:14:47] 2025-12-02 22:14:26,394 [wrapper] Pilot exit status: 0
[2025-12-02 17:14:47] 2025-12-02 22:14:26,422 [wrapper] pandaids: 6897834960
[2025-12-02 17:14:47] 2025-12-02 22:14:26,581 [wrapper] cleanup supervisor_pilot  265533 2812486
[2025-12-02 17:14:47] 2025-12-02 22:14:26,593 [wrapper] Test setup, not cleaning
[2025-12-02 17:14:47] 2025-12-02 22:14:26,617 [wrapper] apfmon messages muted
[2025-12-02 17:14:47] 2025-12-02 22:14:26,624 [wrapper] ==== wrapper stdout END ====
[2025-12-02 17:14:47] 2025-12-02 22:14:26,634 [wrapper] ==== wrapper stderr END ====
[2025-12-02 17:14:47]  *** Error codes and diagnostics ***
[2025-12-02 17:14:47]     "exeErrorCode": 0,
[2025-12-02 17:14:47]     "exeErrorDiag": "",
[2025-12-02 17:14:47]     "pilotErrorCode": 0,
[2025-12-02 17:14:47]     "pilotErrorDiag": "",
[2025-12-02 17:14:47]  *** Listing of results directory ***
[2025-12-02 17:14:47] total 1067192
[2025-12-02 17:14:47] -rw-r--r--. 1 boincer umatlas    576529 Nov 28 17:41 pilot3.tar.gz
[2025-12-02 17:14:47] -rwx------. 1 boincer umatlas     36292 Nov 28 17:46 runpilot2-wrapper.sh
[2025-12-02 17:14:47] -rw-r--r--. 1 boincer umatlas      5112 Nov 28 17:49 queuedata.json
[2025-12-02 17:14:47] -rw-r--r--. 1 boincer umatlas       100 Dec  2 04:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 17:14:47] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 04:06 run_atlas
[2025-12-02 17:14:47] -rw-r--r--. 1 boincer umatlas       105 Dec  2 04:06 job.xml
[2025-12-02 17:14:47] -rw-r--r--. 2 boincer umatlas 379053909 Dec  2 04:06 EVNT.47531050._000486.pool.root.1
[2025-12-02 17:14:47] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 04:06 start_atlas.sh
[2025-12-02 17:14:47] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 04:06 shared
[2025-12-02 17:14:47] -rw-r--r--. 2 boincer umatlas    590127 Dec  2 04:06 input.tar.gz
[2025-12-02 17:14:47] -rw-r--r--. 1 boincer umatlas         0 Dec  2 04:06 boinc_lockfile
[2025-12-02 17:14:47] -rw-r--r--. 1 boincer umatlas      2881 Dec  2 04:06 pandaJob.out
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas        57 Dec  2 04:06 setup.sh.local
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas    990249 Dec  2 04:06 agis_schedconf.cvmfs.json
[2025-12-02 17:14:47] drwx------. 5 boincer umatlas      4096 Dec  2 04:06 pilot3
[2025-12-02 17:14:47] -rw-r--r--. 1 boincer umatlas       533 Dec  2 16:54 boinc_task_state.xml
[2025-12-02 17:14:47] -rw-r--r--. 1 boincer umatlas      6948 Dec  2 17:12 init_data.xml
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas 693148108 Dec  2 17:12 HITS.47531058._001014.pool.root.1
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas      1064 Dec  2 17:13 memory_monitor_summary.json
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas        95 Dec  2 17:13 pilot_heartbeat.json
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas   1516240 Dec  2 17:13 agis_ddmendpoints.agis.ALL.json
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas   2080302 Dec  2 17:13 log.47531058._001014.job.log.tgz.1
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas     28085 Dec  2 17:13 heartbeat.json
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas       823 Dec  2 17:14 pilotlog.txt
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas   6244236 Dec  2 17:14 log.47531058._001014.job.log.1
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas       353 Dec  2 17:14 output.list
[2025-12-02 17:14:47] -rw-r--r--. 1 boincer umatlas       620 Dec  2 17:14 runtime_log
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas   8366080 Dec  2 17:14 result.tar.gz
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas       665 Dec  2 17:14 VLTLDmZPMj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUtOKDmzE29wn.diag
[2025-12-02 17:14:47] -rw-r--r--. 1 boincer umatlas      9343 Dec  2 17:14 runtime_log.err
[2025-12-02 17:14:47] -rw-r--r--. 1 boincer umatlas        29 Dec  2 17:14 wrapper_checkpoint.txt
[2025-12-02 17:14:47] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 17:14 boinc_mmap_file
[2025-12-02 17:14:47] -rw-r--r--. 1 boincer umatlas     21130 Dec  2 17:14 stderr.txt
[2025-12-02 17:14:47] HITS file was successfully produced:
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas 693148108 Dec  2 17:12 shared/HITS.pool.root.1
[2025-12-02 17:14:47]  *** Contents of shared directory: ***
[2025-12-02 17:14:47] total 1055852
[2025-12-02 17:14:47] -rw-r--r--. 2 boincer umatlas 379053909 Dec  2 04:06 ATLAS.root_0
[2025-12-02 17:14:47] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 04:06 start_atlas.sh
[2025-12-02 17:14:47] -rw-r--r--. 2 boincer umatlas    590127 Dec  2 04:06 input.tar.gz
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas 693148108 Dec  2 17:12 HITS.pool.root.1
[2025-12-02 17:14:47] -rw-------. 1 boincer umatlas   8366080 Dec  2 17:14 result.tar.gz
17:14:49 (2808422): run_atlas exited; CPU time 177421.785939
17:14:49 (2808422): called boinc_finish(0)

</stderr_txt>
]]>

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