Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:46:01 (1278221): wrapper (7.7.26015): starting
04:46:01 (1278221): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 04:46:01] Arguments: --nthreads 8
[2025-12-02 04:46:01] Threads: 8
[2025-12-02 04:46:01] Checking for CVMFS
[2025-12-02 04:46:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 04:46:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 04:46:02] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 04:46:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 04:46:03] 2.13.3.0 11888 38481 377496 153550 2 267 29458475 32935937 32920 16776704 0 201603952 99.515 251590949 35027 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 04:46:03] CVMFS is ok
[2025-12-02 04:46:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 04:46:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 04:46:03] Further information can be found at the LHC@home message board.
[2025-12-02 04:46:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 04:46:03] Checking for apptainer binary...
[2025-12-02 04:46:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 04:46:03] Running /usr/bin/apptainer --version
[2025-12-02 04:46:03] apptainer version 1.4.4-1.el9
[2025-12-02 04:46:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 04:46:05] c6-2-11-3.aglt2.org
[2025-12-02 04:46:05] apptainer works
[2025-12-02 04:46:05] Set ATHENA_PROC_NUMBER=8
[2025-12-02 04:46:05] Set ATHENA_CORE_NUMBER=8
[2025-12-02 04:46:05] Starting ATLAS job with PandaID=6908987581
[2025-12-02 04:46:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 09:42:00]  *** The last 200 lines of the pilot log: ***
[2025-12-02 09:42:00] 2025-12-02 14:40:55,560 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-02 09:42:00] 2025-12-02 14:40:55,629 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2688.507041666667
[2025-12-02 09:42:00] 2025-12-02 14:40:55,747 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6908987581/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 09:42:00] 2025-12-02 14:40:55,748 | INFO     | extracted standard info from prmon json
[2025-12-02 09:42:00] 2025-12-02 14:40:55,748 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 09:42:00] 2025-12-02 14:40:55,748 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 09:42:00] 2025-12-02 14:40:55,762 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-02 09:42:00] 2025-12-02 14:40:55,763 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-02 09:42:00] 2025-12-02 14:40:55,792 | INFO     | fitting pss+swap vs Time
[2025-12-02 09:42:00] 2025-12-02 14:40:55,792 | INFO     | sum of square deviations: 7253851290.828683
[2025-12-02 09:42:00] 2025-12-02 14:40:55,821 | INFO     | sum of deviations: 24853577037.202824
[2025-12-02 09:42:00] 2025-12-02 14:40:55,821 | INFO     | mean x: 1764677687.7937062
[2025-12-02 09:42:00] 2025-12-02 14:40:55,821 | INFO     | mean y: 2519824.2237762236
[2025-12-02 09:42:00] 2025-12-02 14:40:55,821 | INFO     | intersect: -6043723902.17655
[2025-12-02 09:42:00] 2025-12-02 14:40:55,822 | INFO     | chi2: 4.43897682846597
[2025-12-02 09:42:00] 2025-12-02 14:40:55,822 | INFO     | sum of square deviations: 6880037342.88971
[2025-12-02 09:42:00] 2025-12-02 14:40:55,844 | INFO     | sum of deviations: 61923980818.13881
[2025-12-02 09:42:00] 2025-12-02 14:40:55,845 | INFO     | mean x: 1764677535.2989323
[2025-12-02 09:42:00] 2025-12-02 14:40:55,845 | INFO     | mean y: 2534783.462633452
[2025-12-02 09:42:00] 2025-12-02 14:40:55,845 | INFO     | intersect: -15880497880.449362
[2025-12-02 09:42:00] 2025-12-02 14:40:55,845 | INFO     | chi2: 2.9525982341994066
[2025-12-02 09:42:00] 2025-12-02 14:40:55,846 | INFO     | current chi2=2.9525982341994066 (change=33.48471171858378 %)
[2025-12-02 09:42:00] 2025-12-02 14:40:55,846 | INFO     | sum of square deviations: 6519258880.637686
[2025-12-02 09:42:00] 2025-12-02 14:40:55,870 | INFO     | time since job start (17617s) is within the limit (172800.0s)
[2025-12-02 09:42:00] 2025-12-02 14:40:55,872 | INFO     | sum of deviations: 60175066029.49274
[2025-12-02 09:42:00] 2025-12-02 14:40:55,872 | INFO     | mean x: 1764677382.7971015
[2025-12-02 09:42:00] 2025-12-02 14:40:55,872 | INFO     | mean y: 2534044.115942029
[2025-12-02 09:42:00] 2025-12-02 14:40:55,872 | INFO     | intersect: -16286062554.793934
[2025-12-02 09:42:00] 2025-12-02 14:40:55,872 | INFO     | chi2: 2.954447070762806
[2025-12-02 09:42:00] 2025-12-02 14:40:55,873 | INFO     | current chi2=2.954447070762806 (change=-0.06261727525216793 %)
[2025-12-02 09:42:00] 2025-12-02 14:40:55,873 | INFO     | right removable region: 275
[2025-12-02 09:42:00] 2025-12-02 14:40:55,873 | INFO     | sum of square deviations: 6879986102.889709
[2025-12-02 09:42:00] 2025-12-02 14:40:55,899 | INFO     | sum of deviations: -48373412023.42707
[2025-12-02 09:42:00] 2025-12-02 14:40:55,900 | INFO     | mean x: 1764677840.2989323
[2025-12-02 09:42:00] 2025-12-02 14:40:55,900 | INFO     | mean y: 2549595.5765124555
[2025-12-02 09:42:00] 2025-12-02 14:40:55,900 | INFO     | intersect: 12410058416.202995
[2025-12-02 09:42:00] 2025-12-02 14:40:55,900 | INFO     | chi2: 1.8748235757388965
[2025-12-02 09:42:00] 2025-12-02 14:40:55,901 | INFO     | current chi2=1.8748235757388965 (change=57.764510872952634 %)
[2025-12-02 09:42:00] 2025-12-02 14:40:55,901 | INFO     | sum of square deviations: 6519190927.434821
[2025-12-02 09:42:00] 2025-12-02 14:40:55,932 | INFO     | sum of deviations: -58257192966.13046
[2025-12-02 09:42:00] 2025-12-02 14:40:55,932 | INFO     | mean x: 1764677992.8043478
[2025-12-02 09:42:00] 2025-12-02 14:40:55,933 | INFO     | mean y: 2553747.775362319
[2025-12-02 09:42:00] 2025-12-02 14:40:55,933 | INFO     | intersect: 15772177232.378317
[2025-12-02 09:42:00] 2025-12-02 14:40:55,933 | INFO     | chi2: 1.8029527133403942
[2025-12-02 09:42:00] 2025-12-02 14:40:55,933 | INFO     | current chi2=1.8029527133403942 (change=3.8334733640298326 %)
[2025-12-02 09:42:00] 2025-12-02 14:40:55,933 | INFO     | left removable region: 20
[2025-12-02 09:42:00] 2025-12-02 14:40:55,934 | INFO     | sum of square deviations: 5141407775.6313715
[2025-12-02 09:42:00] 2025-12-02 14:40:55,966 | INFO     | sum of deviations: -1222924343.831368
[2025-12-02 09:42:00] 2025-12-02 14:40:55,966 | INFO     | mean x: 1764677962.3215687
[2025-12-02 09:42:00] 2025-12-02 14:40:55,966 | INFO     | mean y: 2559920.2784313727
[2025-12-02 09:42:00] 2025-12-02 14:40:55,966 | INFO     | intersect: 422302475.8824296
[2025-12-02 09:42:00] 2025-12-02 14:40:55,967 | INFO     | chi2: 0.15661963919257219
[2025-12-02 09:42:00] 2025-12-02 14:40:55,967 | INFO     | current memory leak: -0.24 B/s (using 255 data points, chi2=0.16)
[2025-12-02 09:42:00] 2025-12-02 14:40:55,967 | INFO     | could have reported an average CPU frequency of 2676 MHz (13 samples)
[2025-12-02 09:42:00] 2025-12-02 14:40:55,968 | INFO     | ..............................
[2025-12-02 09:42:00] 2025-12-02 14:40:55,968 | INFO     | . Timing measurements:
[2025-12-02 09:42:00] 2025-12-02 14:40:55,968 | INFO     | . get job = 0 s
[2025-12-02 09:42:00] 2025-12-02 14:40:55,968 | INFO     | . initial setup = 6 s
[2025-12-02 09:42:00] 2025-12-02 14:40:55,968 | INFO     | . payload setup = 45 s
[2025-12-02 09:42:00] 2025-12-02 14:40:55,968 | INFO     | . stage-in = 0 s
[2025-12-02 09:42:00] 2025-12-02 14:40:55,968 | INFO     | . payload execution = 17438 s
[2025-12-02 09:42:00] 2025-12-02 14:40:55,968 | INFO     | . stage-out = 9 s
[2025-12-02 09:42:00] 2025-12-02 14:40:55,968 | INFO     | . log creation = 1 s
[2025-12-02 09:42:00] 2025-12-02 14:40:55,968 | INFO     | ..............................
[2025-12-02 09:42:00] 2025-12-02 14:40:56,577 | INFO     | 
[2025-12-02 09:42:00] 2025-12-02 14:40:56,577 | INFO     | job summary report
[2025-12-02 09:42:00] 2025-12-02 14:40:56,578 | INFO     | --------------------------------------------------
[2025-12-02 09:42:00] 2025-12-02 14:40:56,578 | INFO     | PanDA job id: 6908987581
[2025-12-02 09:42:00] 2025-12-02 14:40:56,578 | INFO     | task id: 46965017
[2025-12-02 09:42:00] 2025-12-02 14:40:56,578 | INFO     | errors: (none)
[2025-12-02 09:42:00] 2025-12-02 14:40:56,578 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 09:42:00] 2025-12-02 14:40:56,578 | INFO     | pilot state: finished 
[2025-12-02 09:42:00] 2025-12-02 14:40:56,578 | INFO     | transexitcode: 0
[2025-12-02 09:42:00] 2025-12-02 14:40:56,578 | INFO     | exeerrorcode: 0
[2025-12-02 09:42:00] 2025-12-02 14:40:56,578 | INFO     | exeerrordiag: 
[2025-12-02 09:42:00] 2025-12-02 14:40:56,578 | INFO     | exitcode: 0
[2025-12-02 09:42:00] 2025-12-02 14:40:56,578 | INFO     | exitmsg: OK
[2025-12-02 09:42:00] 2025-12-02 14:40:56,578 | INFO     | cpuconsumptiontime: 51113 s
[2025-12-02 09:42:00] 2025-12-02 14:40:56,578 | INFO     | nevents: 400
[2025-12-02 09:42:00] 2025-12-02 14:40:56,579 | INFO     | neventsw: 0
[2025-12-02 09:42:00] 2025-12-02 14:40:56,579 | INFO     | pid: 1293181
[2025-12-02 09:42:00] 2025-12-02 14:40:56,579 | INFO     | pgrp: 1293181
[2025-12-02 09:42:00] 2025-12-02 14:40:56,579 | INFO     | corecount: 8
[2025-12-02 09:42:00] 2025-12-02 14:40:56,579 | INFO     | event service: False
[2025-12-02 09:42:00] 2025-12-02 14:40:56,579 | INFO     | sizes: {0: 2283152, 1: 2283753, 2: 2283837, 3: 2283893, 4: 2284092, 15: 2284092, 27: 2284248, 38: 2284276, 39: 2284566, 49: 2284594, 17487: 2315916, 17488: 2316195
[2025-12-02 09:42:00] 2025-12-02 14:40:56,579 | INFO     | --------------------------------------------------
[2025-12-02 09:42:00] 2025-12-02 14:40:56,579 | INFO     | 
[2025-12-02 09:42:00] 2025-12-02 14:40:56,579 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-12-02 09:42:00] 2025-12-02 14:40:56,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,696 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,696 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,696 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 09:42:00] 2025-12-02 14:40:56,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,702 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 09:42:00] 2025-12-02 14:40:56,703 | INFO     | job 6908987581 has completed (purged errors)
[2025-12-02 09:42:00] 2025-12-02 14:40:56,703 | INFO     | overall cleanup function is called
[2025-12-02 09:42:00] 2025-12-02 14:40:57,722 | INFO     | --- collectZombieJob: --- 10, [1293181]
[2025-12-02 09:42:00] 2025-12-02 14:40:57,722 | INFO     | zombie collector waiting for pid 1293181
[2025-12-02 09:42:00] 2025-12-02 14:40:57,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 09:42:00] 2025-12-02 14:40:57,723 | INFO     | collected zombie processes
[2025-12-02 09:42:00] 2025-12-02 14:40:57,723 | INFO     | will attempt to kill all subprocesses of pid=1293181
[2025-12-02 09:42:00] 2025-12-02 14:41:00,346 | INFO     | process IDs to be killed: [1293181] (in reverse order)
[2025-12-02 09:42:00] 2025-12-02 14:41:00,735 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 09:42:00] 2025-12-02 14:41:00,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 09:42:00] 2025-12-02 14:41:00,769 | INFO     | did not find any defunct processes belonging to 1293181
[2025-12-02 09:42:00] 2025-12-02 14:41:00,796 | INFO     | did not find any defunct processes belonging to 1293181
[2025-12-02 09:42:00] 2025-12-02 14:41:00,798 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 09:42:00] 2025-12-02 14:41:00,798 | INFO     | ready for new job
[2025-12-02 09:42:00] 2025-12-02 14:41:00,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 09:42:00] 2025-12-02 14:41:00,800 | INFO     | ***************************************
[2025-12-02 09:42:00] 2025-12-02 14:41:00,800 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 09:42:00] 2025-12-02 14:41:00,801 | INFO     | ***************************************
[2025-12-02 09:42:00] 2025-12-02 14:41:00,801 | INFO     | 
[2025-12-02 09:42:00] 2025-12-02 14:41:00,808 | INFO     | architecture information:
[2025-12-02 09:42:00] 2025-12-02 14:41:00,808 | INFO     | executing command: cat /etc/os-release
[2025-12-02 09:42:00] 2025-12-02 14:41:00,869 | INFO     | cat /etc/os-release:
[2025-12-02 09:42:00] NAME="CentOS Linux"
[2025-12-02 09:42:00] VERSION="7 (Core)"
[2025-12-02 09:42:00] ID="centos"
[2025-12-02 09:42:00] ID_LIKE="rhel fedora"
[2025-12-02 09:42:00] VERSION_ID="7"
[2025-12-02 09:42:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 09:42:00] ANSI_COLOR="0;31"
[2025-12-02 09:42:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 09:42:00] HOME_URL="https://www.centos.org/"
[2025-12-02 09:42:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 09:42:00] 
[2025-12-02 09:42:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 09:42:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 09:42:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 09:42:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 09:42:00] 
[2025-12-02 09:42:00] 2025-12-02 14:41:00,869 | INFO     | ***************************************
[2025-12-02 09:42:00] 2025-12-02 14:41:01,380 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-12-02 09:42:00] 2025-12-02 14:41:01,473 | INFO     | sufficient remaining disk space (72107425792 B)
[2025-12-02 09:42:00] 2025-12-02 14:41:01,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 09:42:00] 2025-12-02 14:41:01,474 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 09:42:00] 2025-12-02 14:41:01,474 | INFO     | update_server=False
[2025-12-02 09:42:00] 2025-12-02 14:41:01,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 09:42:00] 2025-12-02 14:41:01,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 09:42:00] 2025-12-02 14:41:01,475 | INFO     | aborting loop
[2025-12-02 09:42:00] 2025-12-02 14:41:01,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 09:42:00] 2025-12-02 14:41:02,480 | INFO     | [job] retrieve thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:02,481 | INFO     | [job] job monitor thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:02,481 | INFO     | [job] queue monitor thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:02,501 | INFO     | [payload] validate_post thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:02,555 | INFO     | all data control threads have been joined
[2025-12-02 09:42:00] 2025-12-02 14:41:02,635 | INFO     | all payload control threads have been joined
[2025-12-02 09:42:00] 2025-12-02 14:41:02,669 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:02,773 | INFO     | [payload] failed_post thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:02,862 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:02,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 09:42:00] 2025-12-02 14:41:02,919 | INFO     | all job control threads have been joined
[2025-12-02 09:42:00] 2025-12-02 14:41:03,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 09:42:00] 2025-12-02 14:41:03,493 | INFO     | [data] copytool_in thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:03,494 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:03,494 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:03,500 | INFO     | [job] validate thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:03,583 | INFO     | [data] control thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:03,647 | INFO     | [payload] control thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:03,925 | INFO     | [job] control thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:04,888 | INFO     | [data] copytool_out thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:07,316 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 09:42:00] 2025-12-02 14:41:34,661 | INFO     | PID=1282834 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 09:42:00] 2025-12-02 14:41:34,661 | INFO     | .. there are 66 such processes running
[2025-12-02 09:42:00] 2025-12-02 14:41:34,662 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 09:42:00] 2025-12-02 14:41:34,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 09:42:00] 2025-12-02 14:41:34,663 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 09:42:00] 2025-12-02 14:41:51,265 | INFO     | [monitor] cgroup control has ended
[2025-12-02 09:42:00] 2025-12-02 14:41:53,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137646901056)>', '<ExcThread(monitor, started 140136754947840)>']
[2025-12-02 09:42:00] 2025-12-02 14:41:53,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 09:42:00] 2025-12-02 14:41:53,824 | INFO     | [monitor] control thread has ended
[2025-12-02 09:42:00] 2025-12-02 14:41:58,404 | INFO     | all workflow threads have been joined
[2025-12-02 09:42:00] 2025-12-02 14:41:58,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 09:42:00] 2025-12-02 14:41:58,405 | INFO     | traces error code: 0
[2025-12-02 09:42:00] 2025-12-02 14:41:58,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 09:42:00] 2025-12-02 14:41:58,676 [wrapper] ==== pilot stdout END ====
[2025-12-02 09:42:00] 2025-12-02 14:41:58,701 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 09:42:00] 2025-12-02 14:41:58,728 [wrapper] pilotpid: 1282834
[2025-12-02 09:42:00] 2025-12-02 14:41:58,767 [wrapper] Pilot exit status: 0
[2025-12-02 09:42:00] 2025-12-02 14:41:58,945 [wrapper] pandaids: 6908987581
[2025-12-02 09:42:00] 2025-12-02 14:41:59,558 [wrapper] cleanup supervisor_pilot 2577245 1282835
[2025-12-02 09:42:00] 2025-12-02 14:41:59,578 [wrapper] Test setup, not cleaning
[2025-12-02 09:42:00] 2025-12-02 14:41:59,585 [wrapper] apfmon messages muted
[2025-12-02 09:42:00] 2025-12-02 14:41:59,620 [wrapper] ==== wrapper stdout END ====
[2025-12-02 09:42:00] 2025-12-02 14:41:59,630 [wrapper] ==== wrapper stderr END ====
[2025-12-02 09:42:00]  *** Error codes and diagnostics ***
[2025-12-02 09:42:00]     "exeErrorCode": 0,
[2025-12-02 09:42:00]     "exeErrorDiag": "",
[2025-12-02 09:42:00]     "pilotErrorCode": 0,
[2025-12-02 09:42:00]     "pilotErrorDiag": "",
[2025-12-02 09:42:00]  *** Listing of results directory ***
[2025-12-02 09:42:00] total 463764
[2025-12-02 09:42:00] -rw-r--r--. 1 boincer umatlas    576529 Nov 30 06:05 pilot3.tar.gz
[2025-12-02 09:42:00] -rwx------. 1 boincer umatlas     36292 Nov 30 06:08 runpilot2-wrapper.sh
[2025-12-02 09:42:00] -rw-r--r--. 1 boincer umatlas      5112 Nov 30 06:08 queuedata.json
[2025-12-02 09:42:00] -rw-r--r--. 1 boincer umatlas       100 Dec  2 04:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 09:42:00] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 04:46 run_atlas
[2025-12-02 09:42:00] -rw-r--r--. 1 boincer umatlas       105 Dec  2 04:46 job.xml
[2025-12-02 09:42:00] -rw-r--r--. 2 boincer umatlas 272365296 Dec  2 04:46 EVNT.46965009._000067.pool.root.1
[2025-12-02 09:42:00] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 04:46 start_atlas.sh
[2025-12-02 09:42:00] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 04:46 shared
[2025-12-02 09:42:00] -rw-r--r--. 2 boincer umatlas    589971 Dec  2 04:46 input.tar.gz
[2025-12-02 09:42:00] -rw-r--r--. 1 boincer umatlas         0 Dec  2 04:46 boinc_lockfile
[2025-12-02 09:42:00] -rw-r--r--. 1 boincer umatlas      2652 Dec  2 04:46 pandaJob.out
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas        57 Dec  2 04:46 setup.sh.local
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas    986791 Dec  2 04:47 agis_schedconf.cvmfs.json
[2025-12-02 09:42:00] drwx------. 5 boincer umatlas      4096 Dec  2 04:47 pilot3
[2025-12-02 09:42:00] -rw-r--r--. 1 boincer umatlas      6877 Dec  2 09:36 init_data.xml
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas 194028298 Dec  2 09:38 HITS.46965017._001724.pool.root.1
[2025-12-02 09:42:00] -rw-r--r--. 1 boincer umatlas       531 Dec  2 09:38 boinc_task_state.xml
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas      1044 Dec  2 09:40 memory_monitor_summary.json
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas   1516240 Dec  2 09:40 agis_ddmendpoints.agis.ALL.json
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas    454030 Dec  2 09:40 log.46965017._001724.job.log.tgz.1
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas      7836 Dec  2 09:40 heartbeat.json
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas        95 Dec  2 09:41 pilot_heartbeat.json
[2025-12-02 09:42:00] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 09:41 boinc_mmap_file
[2025-12-02 09:42:00] -rw-r--r--. 1 boincer umatlas        28 Dec  2 09:41 wrapper_checkpoint.txt
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas      4824 Dec  2 09:41 pilotlog.txt
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas   1842681 Dec  2 09:41 log.46965017._001724.job.log.1
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas       357 Dec  2 09:41 output.list
[2025-12-02 09:42:00] -rw-r--r--. 1 boincer umatlas       620 Dec  2 09:42 runtime_log
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas   2314240 Dec  2 09:42 result.tar.gz
[2025-12-02 09:42:00] -rw-r--r--. 1 boincer umatlas      9348 Dec  2 09:42 runtime_log.err
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas       657 Dec  2 09:42 fQMODmSTuj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5ePKDmnFsaQo.diag
[2025-12-02 09:42:00] -rw-r--r--. 1 boincer umatlas     21333 Dec  2 09:42 stderr.txt
[2025-12-02 09:42:00] HITS file was successfully produced:
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas 194028298 Dec  2 09:38 shared/HITS.pool.root.1
[2025-12-02 09:42:00]  *** Contents of shared directory: ***
[2025-12-02 09:42:00] total 458332
[2025-12-02 09:42:00] -rw-r--r--. 2 boincer umatlas 272365296 Dec  2 04:46 ATLAS.root_0
[2025-12-02 09:42:00] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 04:46 start_atlas.sh
[2025-12-02 09:42:00] -rw-r--r--. 2 boincer umatlas    589971 Dec  2 04:46 input.tar.gz
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas 194028298 Dec  2 09:38 HITS.pool.root.1
[2025-12-02 09:42:00] -rw-------. 1 boincer umatlas   2314240 Dec  2 09:42 result.tar.gz
09:42:02 (1278221): run_atlas exited; CPU time 52055.630967
09:42:02 (1278221): called boinc_finish(0)

</stderr_txt>
]]>

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