Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:41:16 (3501496): wrapper (7.7.26015): starting
03:41:16 (3501496): wrapper: running run_atlas (--nthreads 11)
[2025-12-02 03:41:16] Arguments: --nthreads 11
[2025-12-02 03:41:16] Threads: 11
[2025-12-02 03:41:16] Checking for CVMFS
[2025-12-02 03:41:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 03:41:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 03:41:16] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 03:41:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 03:41:17] 2.13.3.0 14328 38441 273448 153549 3 355 30281740 40960001 45418 16776704 0 487106920 99.722 353533502 48990 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 03:41:17] CVMFS is ok
[2025-12-02 03:41:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 03:41:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 03:41:17] Further information can be found at the LHC@home message board.
[2025-12-02 03:41:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 03:41:17] Checking for apptainer binary...
[2025-12-02 03:41:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 03:41:17] Running /usr/bin/apptainer --version
[2025-12-02 03:41:17] apptainer version 1.4.4-1.el9
[2025-12-02 03:41:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 03:41:18] c8-16-2.aglt2.org
[2025-12-02 03:41:18] apptainer works
[2025-12-02 03:41:18] Set ATHENA_PROC_NUMBER=11
[2025-12-02 03:41:18] Set ATHENA_CORE_NUMBER=11
[2025-12-02 03:41:18] Starting ATLAS job with PandaID=6908987604
[2025-12-02 03:41:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 05:26:08]  *** The last 200 lines of the pilot log: ***
[2025-12-02 05:26:08] 2025-12-02 10:25:10,149 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-02 05:26:08] 2025-12-02 10:25:10,162 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.0209531250002
[2025-12-02 05:26:08] 2025-12-02 10:25:10,254 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6908987604/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 05:26:08] 2025-12-02 10:25:10,254 | INFO     | extracted standard info from prmon json
[2025-12-02 05:26:08] 2025-12-02 10:25:10,254 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 05:26:08] 2025-12-02 10:25:10,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 05:26:08] 2025-12-02 10:25:10,255 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-02 05:26:08] 2025-12-02 10:25:10,255 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-02 05:26:08] 2025-12-02 10:25:10,256 | INFO     | fitting pss+swap vs Time
[2025-12-02 05:26:08] 2025-12-02 10:25:10,256 | INFO     | sum of square deviations: 310061666.50999916
[2025-12-02 05:26:08] 2025-12-02 10:25:10,256 | INFO     | sum of deviations: -12467034883.260004
[2025-12-02 05:26:08] 2025-12-02 10:25:10,256 | INFO     | mean x: 1764667998.57
[2025-12-02 05:26:08] 2025-12-02 10:25:10,256 | INFO     | mean y: 2718905.18
[2025-12-02 05:26:08] 2025-12-02 10:25:10,256 | INFO     | intersect: 70956918897.6364
[2025-12-02 05:26:08] 2025-12-02 10:25:10,257 | INFO     | chi2: 2.3339996764291673
[2025-12-02 05:26:08] 2025-12-02 10:25:10,257 | INFO     | sum of square deviations: 265833859.62105316
[2025-12-02 05:26:08] 2025-12-02 10:25:10,257 | INFO     | sum of deviations: -4874298095.326316
[2025-12-02 05:26:08] 2025-12-02 10:25:10,257 | INFO     | mean x: 1764667846.0631578
[2025-12-02 05:26:08] 2025-12-02 10:25:10,257 | INFO     | mean y: 2744150.2210526317
[2025-12-02 05:26:08] 2025-12-02 10:25:10,257 | INFO     | intersect: 32359484308.19313
[2025-12-02 05:26:08] 2025-12-02 10:25:10,257 | INFO     | chi2: 1.6472835717989327
[2025-12-02 05:26:08] 2025-12-02 10:25:10,257 | INFO     | current chi2=1.6472835717989327 (change=29.42228791054741 %)
[2025-12-02 05:26:08] 2025-12-02 10:25:10,257 | INFO     | sum of square deviations: 226030292.10000023
[2025-12-02 05:26:08] 2025-12-02 10:25:10,257 | INFO     | sum of deviations: -4173202552.166666
[2025-12-02 05:26:08] 2025-12-02 10:25:10,258 | INFO     | mean x: 1764667693.5666666
[2025-12-02 05:26:08] 2025-12-02 10:25:10,258 | INFO     | mean y: 2746833.611111111
[2025-12-02 05:26:08] 2025-12-02 10:25:10,258 | INFO     | intersect: 32583847597.13337
[2025-12-02 05:26:08] 2025-12-02 10:25:10,258 | INFO     | chi2: 1.6470180991275667
[2025-12-02 05:26:08] 2025-12-02 10:25:10,258 | INFO     | current chi2=1.6470180991275667 (change=0.016115784550445985 %)
[2025-12-02 05:26:08] 2025-12-02 10:25:10,258 | INFO     | right removable region: 89
[2025-12-02 05:26:08] 2025-12-02 10:25:10,258 | INFO     | sum of square deviations: 265835446.48420998
[2025-12-02 05:26:08] 2025-12-02 10:25:10,278 | INFO     | time since job start (6203s) is within the limit (172800.0s)
[2025-12-02 05:26:08] 2025-12-02 10:25:10,279 | INFO     | sum of deviations: -26547266979.28421
[2025-12-02 05:26:08] 2025-12-02 10:25:10,279 | INFO     | mean x: 1764668151.0736842
[2025-12-02 05:26:08] 2025-12-02 10:25:10,279 | INFO     | mean y: 2765988.3263157895
[2025-12-02 05:26:08] 2025-12-02 10:25:10,279 | INFO     | intersect: 176228762769.29193
[2025-12-02 05:26:08] 2025-12-02 10:25:10,279 | INFO     | chi2: 0.890595574100364
[2025-12-02 05:26:08] 2025-12-02 10:25:10,280 | INFO     | current chi2=0.890595574100364 (change=61.84251509996335 %)
[2025-12-02 05:26:08] 2025-12-02 10:25:10,280 | INFO     | sum of square deviations: 226027913.95555547
[2025-12-02 05:26:08] 2025-12-02 10:25:10,280 | INFO     | sum of deviations: -22351253464.08889
[2025-12-02 05:26:08] 2025-12-02 10:25:10,280 | INFO     | mean x: 1764668303.5777779
[2025-12-02 05:26:08] 2025-12-02 10:25:10,280 | INFO     | mean y: 2749851.1555555556
[2025-12-02 05:26:08] 2025-12-02 10:25:10,280 | INFO     | intersect: 174505747481.20215
[2025-12-02 05:26:08] 2025-12-02 10:25:10,280 | INFO     | chi2: 0.8886434392356402
[2025-12-02 05:26:08] 2025-12-02 10:25:10,280 | INFO     | current chi2=0.8886434392356402 (change=0.21919431462432862 %)
[2025-12-02 05:26:08] 2025-12-02 10:25:10,280 | INFO     | left removable region: 20
[2025-12-02 05:26:08] 2025-12-02 10:25:10,280 | INFO     | sum of square deviations: 101844265.47826073
[2025-12-02 05:26:08] 2025-12-02 10:25:10,280 | INFO     | sum of deviations: -6185721163.304349
[2025-12-02 05:26:08] 2025-12-02 10:25:10,280 | INFO     | mean x: 1764668273.0869565
[2025-12-02 05:26:08] 2025-12-02 10:25:10,280 | INFO     | mean y: 2740661.217391304
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | intersect: 107183501716.20047
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | chi2: 0.1081335123294731
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | current memory leak: -60.74 B/s (using 69 data points, chi2=0.11)
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | ..............................
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | . Timing measurements:
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | . get job = 0 s
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | . initial setup = 2 s
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | . payload setup = 17 s
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | . stage-in = 0 s
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | . payload execution = 6085 s
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | . stage-out = 2 s
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | . log creation = 0 s
[2025-12-02 05:26:08] 2025-12-02 10:25:10,281 | INFO     | ..............................
[2025-12-02 05:26:08] 2025-12-02 10:25:10,943 | INFO     | 
[2025-12-02 05:26:08] 2025-12-02 10:25:10,944 | INFO     | job summary report
[2025-12-02 05:26:08] 2025-12-02 10:25:10,944 | INFO     | --------------------------------------------------
[2025-12-02 05:26:08] 2025-12-02 10:25:10,944 | INFO     | PanDA job id: 6908987604
[2025-12-02 05:26:08] 2025-12-02 10:25:10,944 | INFO     | task id: 46965017
[2025-12-02 05:26:08] 2025-12-02 10:25:10,944 | INFO     | errors: (none)
[2025-12-02 05:26:08] 2025-12-02 10:25:10,944 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 05:26:08] 2025-12-02 10:25:10,944 | INFO     | pilot state: finished 
[2025-12-02 05:26:08] 2025-12-02 10:25:10,944 | INFO     | transexitcode: 0
[2025-12-02 05:26:08] 2025-12-02 10:25:10,944 | INFO     | exeerrorcode: 0
[2025-12-02 05:26:08] 2025-12-02 10:25:10,944 | INFO     | exeerrordiag: 
[2025-12-02 05:26:08] 2025-12-02 10:25:10,944 | INFO     | exitcode: 0
[2025-12-02 05:26:08] 2025-12-02 10:25:10,945 | INFO     | exitmsg: OK
[2025-12-02 05:26:08] 2025-12-02 10:25:10,945 | INFO     | cpuconsumptiontime: 27540 s
[2025-12-02 05:26:08] 2025-12-02 10:25:10,945 | INFO     | nevents: 400
[2025-12-02 05:26:08] 2025-12-02 10:25:10,945 | INFO     | neventsw: 0
[2025-12-02 05:26:08] 2025-12-02 10:25:10,945 | INFO     | pid: 3529973
[2025-12-02 05:26:08] 2025-12-02 10:25:10,945 | INFO     | pgrp: 3529973
[2025-12-02 05:26:08] 2025-12-02 10:25:10,945 | INFO     | corecount: 11
[2025-12-02 05:26:08] 2025-12-02 10:25:10,945 | INFO     | event service: False
[2025-12-02 05:26:08] 2025-12-02 10:25:10,945 | INFO     | sizes: {0: 2283807, 1: 2284006, 12: 2284006, 14: 2284296, 23: 2284324, 6107: 2311215, 6110: 2320213, 6112: 2320269, 6165: 2320463}
[2025-12-02 05:26:08] 2025-12-02 10:25:10,945 | INFO     | --------------------------------------------------
[2025-12-02 05:26:08] 2025-12-02 10:25:10,945 | INFO     | 
[2025-12-02 05:26:08] 2025-12-02 10:25:10,945 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-12-02 05:26:08] 2025-12-02 10:25:11,205 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,205 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,205 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,205 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | job 6908987604 has completed (purged errors)
[2025-12-02 05:26:08] 2025-12-02 10:25:11,206 | INFO     | overall cleanup function is called
[2025-12-02 05:26:08] 2025-12-02 10:25:12,263 | INFO     | --- collectZombieJob: --- 10, [3529973]
[2025-12-02 05:26:08] 2025-12-02 10:25:12,263 | INFO     | zombie collector waiting for pid 3529973
[2025-12-02 05:26:08] 2025-12-02 10:25:12,263 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 05:26:08] 2025-12-02 10:25:12,263 | INFO     | collected zombie processes
[2025-12-02 05:26:08] 2025-12-02 10:25:12,263 | INFO     | will attempt to kill all subprocesses of pid=3529973
[2025-12-02 05:26:08] 2025-12-02 10:25:15,188 | INFO     | process IDs to be killed: [3529973] (in reverse order)
[2025-12-02 05:26:08] 2025-12-02 10:25:16,447 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 05:26:08] 2025-12-02 10:25:16,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 05:26:08] 2025-12-02 10:25:16,519 | INFO     | did not find any defunct processes belonging to 3529973
[2025-12-02 05:26:08] 2025-12-02 10:25:16,597 | INFO     | did not find any defunct processes belonging to 3529973
[2025-12-02 05:26:08] 2025-12-02 10:25:16,602 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 05:26:08] 2025-12-02 10:25:16,602 | INFO     | ready for new job
[2025-12-02 05:26:08] 2025-12-02 10:25:16,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 05:26:08] 2025-12-02 10:25:16,603 | INFO     | ***************************************
[2025-12-02 05:26:08] 2025-12-02 10:25:16,603 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 05:26:08] 2025-12-02 10:25:16,603 | INFO     | ***************************************
[2025-12-02 05:26:08] 2025-12-02 10:25:16,603 | INFO     | 
[2025-12-02 05:26:08] 2025-12-02 10:25:16,618 | INFO     | architecture information:
[2025-12-02 05:26:08] 2025-12-02 10:25:16,625 | INFO     | executing command: cat /etc/os-release
[2025-12-02 05:26:08] 2025-12-02 10:25:16,715 | INFO     | cat /etc/os-release:
[2025-12-02 05:26:08] NAME="CentOS Linux"
[2025-12-02 05:26:08] VERSION="7 (Core)"
[2025-12-02 05:26:08] ID="centos"
[2025-12-02 05:26:08] ID_LIKE="rhel fedora"
[2025-12-02 05:26:08] VERSION_ID="7"
[2025-12-02 05:26:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 05:26:08] ANSI_COLOR="0;31"
[2025-12-02 05:26:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 05:26:08] HOME_URL="https://www.centos.org/"
[2025-12-02 05:26:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 05:26:08] 
[2025-12-02 05:26:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 05:26:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 05:26:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 05:26:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 05:26:08] 
[2025-12-02 05:26:08] 2025-12-02 10:25:16,716 | INFO     | ***************************************
[2025-12-02 05:26:08] 2025-12-02 10:25:17,235 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-12-02 05:26:08] 2025-12-02 10:25:17,291 | INFO     | sufficient remaining disk space (166381748224 B)
[2025-12-02 05:26:08] 2025-12-02 10:25:17,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 05:26:08] 2025-12-02 10:25:17,291 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 05:26:08] 2025-12-02 10:25:17,291 | INFO     | update_server=False
[2025-12-02 05:26:08] 2025-12-02 10:25:17,291 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 05:26:08] 2025-12-02 10:25:17,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 05:26:08] 2025-12-02 10:25:17,812 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 05:26:08] 2025-12-02 10:25:17,812 | INFO     | aborting loop
[2025-12-02 05:26:08] 2025-12-02 10:25:17,909 | INFO     | all data control threads have been joined
[2025-12-02 05:26:08] 2025-12-02 10:25:18,299 | INFO     | [job] retrieve thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:18,317 | INFO     | all payload control threads have been joined
[2025-12-02 05:26:08] 2025-12-02 10:25:18,386 | INFO     | [job] validate thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:18,635 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:18,661 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 05:26:08] 2025-12-02 10:25:18,819 | INFO     | [job] job monitor thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:18,831 | INFO     | all job control threads have been joined
[2025-12-02 05:26:08] 2025-12-02 10:25:18,867 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:18,916 | INFO     | [data] control thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:18,986 | INFO     | [data] copytool_in thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:19,187 | INFO     | [payload] validate_post thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:19,298 | INFO     | [data] copytool_out thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:19,315 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:19,315 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:19,323 | INFO     | [payload] control thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:19,522 | INFO     | [payload] failed_post thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:19,837 | INFO     | [job] control thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:19,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 05:26:08] 2025-12-02 10:25:20,992 | INFO     | [job] queue monitor thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:22,683 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 05:26:08] 2025-12-02 10:25:45,542 | INFO     | PID=3513986 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 05:26:08] 2025-12-02 10:25:45,549 | INFO     | .. there are 114 such processes running
[2025-12-02 05:26:08] 2025-12-02 10:25:45,549 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 05:26:08] 2025-12-02 10:25:45,549 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 05:26:08] 2025-12-02 10:25:45,549 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 05:26:08] 2025-12-02 10:25:58,510 | INFO     | [monitor] cgroup control has ended
[2025-12-02 05:26:08] 2025-12-02 10:25:59,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866026489664)>', '<ExcThread(monitor, started 139865391879936)>']
[2025-12-02 05:26:08] 2025-12-02 10:25:59,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 05:26:08] 2025-12-02 10:25:59,648 | INFO     | [monitor] control thread has ended
[2025-12-02 05:26:08] 2025-12-02 10:26:04,603 | INFO     | all workflow threads have been joined
[2025-12-02 05:26:08] 2025-12-02 10:26:04,603 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 05:26:08] 2025-12-02 10:26:04,603 | INFO     | traces error code: 0
[2025-12-02 05:26:08] 2025-12-02 10:26:04,604 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 05:26:08] 2025-12-02 10:26:06,072 [wrapper] ==== pilot stdout END ====
[2025-12-02 05:26:08] 2025-12-02 10:26:06,113 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 05:26:08] 2025-12-02 10:26:06,144 [wrapper] pilotpid: 3513986
[2025-12-02 05:26:08] 2025-12-02 10:26:06,175 [wrapper] Pilot exit status: 0
[2025-12-02 05:26:08] 2025-12-02 10:26:06,264 [wrapper] pandaids: 6908987604
[2025-12-02 05:26:08] 2025-12-02 10:26:06,891 [wrapper] cleanup supervisor_pilot 4079479 3513987
[2025-12-02 05:26:08] 2025-12-02 10:26:06,904 [wrapper] Test setup, not cleaning
[2025-12-02 05:26:08] 2025-12-02 10:26:06,950 [wrapper] apfmon messages muted
[2025-12-02 05:26:08] 2025-12-02 10:26:06,977 [wrapper] ==== wrapper stdout END ====
[2025-12-02 05:26:08] 2025-12-02 10:26:07,021 [wrapper] ==== wrapper stderr END ====
[2025-12-02 05:26:08]  *** Error codes and diagnostics ***
[2025-12-02 05:26:08]     "exeErrorCode": 0,
[2025-12-02 05:26:08]     "exeErrorDiag": "",
[2025-12-02 05:26:08]     "pilotErrorCode": 0,
[2025-12-02 05:26:08]     "pilotErrorDiag": "",
[2025-12-02 05:26:08]  *** Listing of results directory ***
[2025-12-02 05:26:08] total 463932
[2025-12-02 05:26:08] -rw-r--r--. 1 boincer umatlas    576529 Nov 30 06:05 pilot3.tar.gz
[2025-12-02 05:26:08] -rwx------. 1 boincer umatlas     36292 Nov 30 06:08 runpilot2-wrapper.sh
[2025-12-02 05:26:08] -rw-r--r--. 1 boincer umatlas      5112 Nov 30 06:09 queuedata.json
[2025-12-02 05:26:08] -rw-r--r--. 1 boincer umatlas       100 Dec  2 03:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 05:26:08] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 03:41 run_atlas
[2025-12-02 05:26:08] -rw-r--r--. 1 boincer umatlas       105 Dec  2 03:41 job.xml
[2025-12-02 05:26:08] -rw-r--r--. 2 boincer umatlas 275857836 Dec  2 03:41 EVNT.46965009._000068.pool.root.1
[2025-12-02 05:26:08] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 03:41 start_atlas.sh
[2025-12-02 05:26:08] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 03:41 shared
[2025-12-02 05:26:08] -rw-r--r--. 2 boincer umatlas    589973 Dec  2 03:41 input.tar.gz
[2025-12-02 05:26:08] -rw-r--r--. 1 boincer umatlas         0 Dec  2 03:41 boinc_lockfile
[2025-12-02 05:26:08] -rw-r--r--. 1 boincer umatlas      2651 Dec  2 03:41 pandaJob.out
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas        57 Dec  2 03:41 setup.sh.local
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas    990249 Dec  2 03:41 agis_schedconf.cvmfs.json
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas   1516240 Dec  2 03:41 agis_ddmendpoints.agis.ALL.json
[2025-12-02 05:26:08] drwx------. 5 boincer umatlas      4096 Dec  2 03:41 pilot3
[2025-12-02 05:26:08] -rw-r--r--. 1 boincer umatlas      7172 Dec  2 05:20 init_data.xml
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas 193005054 Dec  2 05:23 HITS.46965017._001747.pool.root.1
[2025-12-02 05:26:08] -rw-r--r--. 1 boincer umatlas       529 Dec  2 05:23 boinc_task_state.xml
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas      1045 Dec  2 05:24 memory_monitor_summary.json
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas    370989 Dec  2 05:24 log.46965017._001747.job.log.tgz.1
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas        95 Dec  2 05:24 pilot_heartbeat.json
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas      7770 Dec  2 05:25 heartbeat.json
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas      4826 Dec  2 05:26 pilotlog.txt
[2025-12-02 05:26:08] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 05:26 boinc_mmap_file
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas    772675 Dec  2 05:26 log.46965017._001747.job.log.1
[2025-12-02 05:26:08] -rw-r--r--. 1 boincer umatlas        27 Dec  2 05:26 wrapper_checkpoint.txt
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas       357 Dec  2 05:26 output.list
[2025-12-02 05:26:08] -rw-r--r--. 1 boincer umatlas       620 Dec  2 05:26 runtime_log
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas   1167360 Dec  2 05:26 result.tar.gz
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas       652 Dec  2 05:26 SOdKDmTTuj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRfPKDmKVh1zm.diag
[2025-12-02 05:26:08] -rw-r--r--. 1 boincer umatlas      9339 Dec  2 05:26 runtime_log.err
[2025-12-02 05:26:08] -rw-r--r--. 1 boincer umatlas     21297 Dec  2 05:26 stderr.txt
[2025-12-02 05:26:08] HITS file was successfully produced:
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas 193005054 Dec  2 05:23 shared/HITS.pool.root.1
[2025-12-02 05:26:08]  *** Contents of shared directory: ***
[2025-12-02 05:26:08] total 459620
[2025-12-02 05:26:08] -rw-r--r--. 2 boincer umatlas 275857836 Dec  2 03:41 ATLAS.root_0
[2025-12-02 05:26:08] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 03:41 start_atlas.sh
[2025-12-02 05:26:08] -rw-r--r--. 2 boincer umatlas    589973 Dec  2 03:41 input.tar.gz
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas 193005054 Dec  2 05:23 HITS.pool.root.1
[2025-12-02 05:26:08] -rw-------. 1 boincer umatlas   1167360 Dec  2 05:26 result.tar.gz
05:26:09 (3501496): run_atlas exited; CPU time 27798.669923
05:26:09 (3501496): called boinc_finish(0)

</stderr_txt>
]]>

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