Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:42:22 (3521924): wrapper (7.7.26015): starting
03:42:22 (3521924): wrapper: running run_atlas (--nthreads 11)
[2025-12-02 03:42:22] Arguments: --nthreads 11
[2025-12-02 03:42:22] Threads: 11
[2025-12-02 03:42:22] Checking for CVMFS
[2025-12-02 03:42:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 03:42:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 03:42:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 03:42:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 03:42:23] 2.13.3.0 14328 38442 275940 153549 2 376 30285616 40960000 46073 16776704 0 487155355 99.722 353534184 48990 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 03:42:23] CVMFS is ok
[2025-12-02 03:42:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 03:42:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 03:42:23] Further information can be found at the LHC@home message board.
[2025-12-02 03:42:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 03:42:23] Checking for apptainer binary...
[2025-12-02 03:42:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 03:42:23] Running /usr/bin/apptainer --version
[2025-12-02 03:42:24] apptainer version 1.4.4-1.el9
[2025-12-02 03:42:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 03:42:24] c8-16-2.aglt2.org
[2025-12-02 03:42:24] apptainer works
[2025-12-02 03:42:24] Set ATHENA_PROC_NUMBER=11
[2025-12-02 03:42:24] Set ATHENA_CORE_NUMBER=11
[2025-12-02 03:42:24] Starting ATLAS job with PandaID=6895340051
[2025-12-02 03:42:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 13:21:06]  *** The last 200 lines of the pilot log: ***
[2025-12-02 13:21:06] 2025-12-02 18:19:40,509 | INFO     | time since job start (34605s) is within the limit (172800.0s)
[2025-12-02 13:21:06] 2025-12-02 18:19:42,216 | INFO     | monitor loop #1725: job 0:6895340051 is in state 'finished'
[2025-12-02 13:21:06] 2025-12-02 18:19:42,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 13:21:06] 2025-12-02 18:19:42,550 | INFO     | time since job start (34607s) is within the limit (172800.0s)
[2025-12-02 13:21:06] 2025-12-02 18:19:44,557 | INFO     | time since job start (34609s) is within the limit (172800.0s)
[2025-12-02 13:21:06] 2025-12-02 18:19:44,721 | INFO     | monitor loop #1726: job 0:6895340051 is in state 'finished'
[2025-12-02 13:21:06] 2025-12-02 18:19:44,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 13:21:06] 2025-12-02 18:19:46,566 | INFO     | time since job start (34611s) is within the limit (172800.0s)
[2025-12-02 13:21:06] 2025-12-02 18:19:47,238 | INFO     | monitor loop #1727: job 0:6895340051 is in state 'finished'
[2025-12-02 13:21:06] 2025-12-02 18:19:47,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 13:21:06] 2025-12-02 18:19:48,578 | INFO     | time since job start (34613s) is within the limit (172800.0s)
[2025-12-02 13:21:06] 2025-12-02 18:19:49,786 | INFO     | monitor loop #1728: job 0:6895340051 is in state 'finished'
[2025-12-02 13:21:06] 2025-12-02 18:19:49,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 13:21:06] 2025-12-02 18:19:50,587 | INFO     | time since job start (34615s) is within the limit (172800.0s)
[2025-12-02 13:21:06] 2025-12-02 18:19:52,144 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-02 13:21:06] 2025-12-02 18:19:52,208 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.0271171874997
[2025-12-02 13:21:06] 2025-12-02 18:19:52,231 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895340051/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 13:21:06] 2025-12-02 18:19:52,231 | INFO     | extracted standard info from prmon json
[2025-12-02 13:21:06] 2025-12-02 18:19:52,231 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 13:21:06] 2025-12-02 18:19:52,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 13:21:06] 2025-12-02 18:19:52,245 | INFO     | fitting pss+swap vs Time
[2025-12-02 13:21:06] 2025-12-02 18:19:52,254 | INFO     | sum of square deviations: 56220872852.53889
[2025-12-02 13:21:06] 2025-12-02 18:19:52,259 | INFO     | sum of deviations: 696758771753.5012
[2025-12-02 13:21:06] 2025-12-02 18:19:52,260 | INFO     | mean x: 1764682277.7014134
[2025-12-02 13:21:06] 2025-12-02 18:19:52,260 | INFO     | mean y: 3186425.5
[2025-12-02 13:21:06] 2025-12-02 18:19:52,260 | INFO     | intersect: -21866944612.33361
[2025-12-02 13:21:06] 2025-12-02 18:19:52,260 | INFO     | chi2: 24.524352300035783
[2025-12-02 13:21:06] 2025-12-02 18:19:52,260 | INFO     | sum of square deviations: 54744322840.591835
[2025-12-02 13:21:06] 2025-12-02 18:19:52,269 | INFO     | sum of deviations: 931483637389.2694
[2025-12-02 13:21:06] 2025-12-02 18:19:52,269 | INFO     | mean x: 1764682125.2210338
[2025-12-02 13:21:06] 2025-12-02 18:19:52,269 | INFO     | mean y: 3210668.570409982
[2025-12-02 13:21:06] 2025-12-02 18:19:52,269 | INFO     | intersect: -30023145299.392902
[2025-12-02 13:21:06] 2025-12-02 18:19:52,269 | INFO     | chi2: 20.30255826092207
[2025-12-02 13:21:06] 2025-12-02 18:19:52,269 | INFO     | current chi2=20.30255826092207 (change=17.214701483095045 %)
[2025-12-02 13:21:06] 2025-12-02 18:19:52,269 | INFO     | right removable region: 560
[2025-12-02 13:21:06] 2025-12-02 18:19:52,270 | INFO     | sum of square deviations: 54743562780.59187
[2025-12-02 13:21:06] 2025-12-02 18:19:52,278 | INFO     | sum of deviations: 463536574311.75757
[2025-12-02 13:21:06] 2025-12-02 18:19:52,278 | INFO     | mean x: 1764682430.2210338
[2025-12-02 13:21:06] 2025-12-02 18:19:52,283 | INFO     | mean y: 3210492.9696969697
[2025-12-02 13:21:06] 2025-12-02 18:19:52,283 | INFO     | intersect: -14939091522.178053
[2025-12-02 13:21:06] 2025-12-02 18:19:52,284 | INFO     | chi2: 20.861662283880285
[2025-12-02 13:21:06] 2025-12-02 18:19:52,284 | INFO     | current chi2=20.861662283880285 (change=14.934910293839456 %)
[2025-12-02 13:21:06] 2025-12-02 18:19:52,284 | INFO     | left removable region: 10
[2025-12-02 13:21:06] 2025-12-02 18:19:52,284 | INFO     | sum of square deviations: 51585914408.743614
[2025-12-02 13:21:06] 2025-12-02 18:19:52,317 | INFO     | monitor loop #1729: job 0:6895340051 is in state 'finished'
[2025-12-02 13:21:06] 2025-12-02 18:19:52,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 13:21:06] 2025-12-02 18:19:52,318 | INFO     | sum of deviations: 497559692798.98444
[2025-12-02 13:21:06] 2025-12-02 18:19:52,319 | INFO     | mean x: 1764682399.7654545
[2025-12-02 13:21:06] 2025-12-02 18:19:52,319 | INFO     | mean y: 3266749.178181818
[2025-12-02 13:21:06] 2025-12-02 18:19:52,319 | INFO     | intersect: -17017558465.974943
[2025-12-02 13:21:06] 2025-12-02 18:19:52,319 | INFO     | chi2: 11.708473330292055
[2025-12-02 13:21:06] 2025-12-02 18:19:52,319 | INFO     | current memory leak: 9.65 B/s (using 550 data points, chi2=11.71)
[2025-12-02 13:21:06] 2025-12-02 18:19:52,320 | INFO     | could have reported an average CPU frequency of 3800 MHz (22 samples)
[2025-12-02 13:21:06] 2025-12-02 18:19:52,320 | INFO     | ..............................
[2025-12-02 13:21:06] 2025-12-02 18:19:52,320 | INFO     | . Timing measurements:
[2025-12-02 13:21:06] 2025-12-02 18:19:52,320 | INFO     | . get job = 0 s
[2025-12-02 13:21:06] 2025-12-02 18:19:52,320 | INFO     | . initial setup = 3 s
[2025-12-02 13:21:06] 2025-12-02 18:19:52,320 | INFO     | . payload setup = 17 s
[2025-12-02 13:21:06] 2025-12-02 18:19:52,320 | INFO     | . stage-in = 0 s
[2025-12-02 13:21:06] 2025-12-02 18:19:52,320 | INFO     | . payload execution = 34507 s
[2025-12-02 13:21:06] 2025-12-02 18:19:52,320 | INFO     | . stage-out = 9 s
[2025-12-02 13:21:06] 2025-12-02 18:19:52,321 | INFO     | . log creation = 2 s
[2025-12-02 13:21:06] 2025-12-02 18:19:52,321 | INFO     | ..............................
[2025-12-02 13:21:06] 2025-12-02 18:19:52,635 | INFO     | time since job start (34617s) is within the limit (172800.0s)
[2025-12-02 13:21:06] 2025-12-02 18:19:52,696 | INFO     | 
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | job summary report
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | --------------------------------------------------
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | PanDA job id: 6895340051
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | task id: 47556137
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | errors: (none)
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | pilot state: finished 
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | transexitcode: 0
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | exeerrorcode: 0
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | exeerrordiag: 
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | exitcode: 0
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | exitmsg: OK
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | cpuconsumptiontime: 136890 s
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | nevents: 1000
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | neventsw: 0
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | pid: 3550367
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | pgrp: 3550367
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | corecount: 11
[2025-12-02 13:21:06] 2025-12-02 18:19:52,697 | INFO     | event service: False
[2025-12-02 13:21:06] 2025-12-02 18:19:52,698 | INFO     | sizes: {0: 2284213, 11: 2284213, 14: 2284503, 21: 2284531, 34527: 2325191, 34538: 2334185, 34541: 2334369, 34581: 2334615}
[2025-12-02 13:21:06] 2025-12-02 18:19:52,698 | INFO     | --------------------------------------------------
[2025-12-02 13:21:06] 2025-12-02 18:19:52,698 | INFO     | 
[2025-12-02 13:21:06] 2025-12-02 18:19:52,698 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-02 13:21:06] 2025-12-02 18:19:52,962 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,963 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,963 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,963 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,963 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,963 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,963 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,963 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,967 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,967 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,967 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,967 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,967 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,967 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,967 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,967 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 13:21:06] 2025-12-02 18:19:52,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,968 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 13:21:06] 2025-12-02 18:19:52,968 | INFO     | job 6895340051 has completed (purged errors)
[2025-12-02 13:21:06] 2025-12-02 18:19:52,968 | INFO     | overall cleanup function is called
[2025-12-02 13:21:06] 2025-12-02 18:19:54,038 | INFO     | --- collectZombieJob: --- 10, [3550367]
[2025-12-02 13:21:06] 2025-12-02 18:19:54,041 | INFO     | zombie collector waiting for pid 3550367
[2025-12-02 13:21:06] 2025-12-02 18:19:54,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 13:21:06] 2025-12-02 18:19:54,041 | INFO     | collected zombie processes
[2025-12-02 13:21:06] 2025-12-02 18:19:54,041 | INFO     | will attempt to kill all subprocesses of pid=3550367
[2025-12-02 13:21:06] 2025-12-02 18:19:57,692 | INFO     | process IDs to be killed: [3550367] (in reverse order)
[2025-12-02 13:21:06] 2025-12-02 18:19:58,151 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 13:21:06] 2025-12-02 18:19:58,152 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 13:21:06] 2025-12-02 18:19:58,238 | INFO     | did not find any defunct processes belonging to 3550367
[2025-12-02 13:21:06] 2025-12-02 18:19:58,411 | INFO     | did not find any defunct processes belonging to 3550367
[2025-12-02 13:21:06] 2025-12-02 18:19:58,419 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 13:21:06] 2025-12-02 18:19:58,420 | INFO     | ready for new job
[2025-12-02 13:21:06] 2025-12-02 18:19:58,420 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 13:21:06] 2025-12-02 18:19:58,424 | INFO     | ***************************************
[2025-12-02 13:21:06] 2025-12-02 18:19:58,424 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 13:21:06] 2025-12-02 18:19:58,424 | INFO     | ***************************************
[2025-12-02 13:21:06] 2025-12-02 18:19:58,424 | INFO     | 
[2025-12-02 13:21:06] 2025-12-02 18:19:58,461 | INFO     | architecture information:
[2025-12-02 13:21:06] 2025-12-02 18:19:58,465 | INFO     | executing command: cat /etc/os-release
[2025-12-02 13:21:06] 2025-12-02 18:19:58,577 | INFO     | cat /etc/os-release:
[2025-12-02 13:21:06] NAME="CentOS Linux"
[2025-12-02 13:21:06] VERSION="7 (Core)"
[2025-12-02 13:21:06] ID="centos"
[2025-12-02 13:21:06] ID_LIKE="rhel fedora"
[2025-12-02 13:21:06] VERSION_ID="7"
[2025-12-02 13:21:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 13:21:06] ANSI_COLOR="0;31"
[2025-12-02 13:21:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 13:21:06] HOME_URL="https://www.centos.org/"
[2025-12-02 13:21:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 13:21:06] 
[2025-12-02 13:21:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 13:21:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 13:21:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 13:21:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 13:21:06] 
[2025-12-02 13:21:06] 2025-12-02 18:19:58,578 | INFO     | ***************************************
[2025-12-02 13:21:06] 2025-12-02 18:19:59,081 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-02 13:21:06] 2025-12-02 18:19:59,182 | INFO     | sufficient remaining disk space (163756113920 B)
[2025-12-02 13:21:06] 2025-12-02 18:19:59,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 13:21:06] 2025-12-02 18:19:59,183 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 13:21:06] 2025-12-02 18:19:59,183 | INFO     | update_server=False
[2025-12-02 13:21:06] 2025-12-02 18:19:59,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 13:21:06] 2025-12-02 18:19:59,188 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 13:21:06] 2025-12-02 18:19:59,188 | INFO     | aborting loop
[2025-12-02 13:21:06] 2025-12-02 18:19:59,415 | INFO     | all data control threads have been joined
[2025-12-02 13:21:06] 2025-12-02 18:19:59,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 13:21:06] 2025-12-02 18:19:59,722 | INFO     | all payload control threads have been joined
[2025-12-02 13:21:06] 2025-12-02 18:20:00,193 | INFO     | [job] retrieve thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:00,194 | INFO     | [job] job monitor thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:00,250 | INFO     | [payload] failed_post thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:00,388 | INFO     | [payload] validate_post thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:00,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 13:21:06] 2025-12-02 18:20:00,462 | INFO     | [data] control thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:00,730 | INFO     | [payload] control thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:00,872 | INFO     | all job control threads have been joined
[2025-12-02 13:21:06] 2025-12-02 18:20:00,935 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:00,965 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:01,443 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:01,444 | INFO     | [job] validate thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:01,467 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:01,512 | INFO     | [data] copytool_in thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:01,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 13:21:06] 2025-12-02 18:20:01,878 | INFO     | [job] control thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:02,437 | INFO     | [data] copytool_out thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:02,744 | INFO     | [job] queue monitor thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:03,694 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 13:21:06] 2025-12-02 18:20:31,349 | INFO     | PID=3534277 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 13:21:06] 2025-12-02 18:20:31,379 | INFO     | .. there are 112 such processes running
[2025-12-02 13:21:06] 2025-12-02 18:20:31,386 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 13:21:06] 2025-12-02 18:20:31,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 13:21:06] 2025-12-02 18:20:31,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 13:21:06] 2025-12-02 18:20:58,140 | INFO     | [monitor] cgroup control has ended
[2025-12-02 13:21:06] 2025-12-02 18:20:59,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140153063683904)>', '<ExcThread(monitor, started 140152791865088)>']
[2025-12-02 13:21:06] 2025-12-02 18:20:59,623 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 13:21:06] 2025-12-02 18:20:59,623 | INFO     | [monitor] control thread has ended
[2025-12-02 13:21:06] 2025-12-02 18:21:04,501 | INFO     | all workflow threads have been joined
[2025-12-02 13:21:06] 2025-12-02 18:21:04,501 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 13:21:06] 2025-12-02 18:21:04,501 | INFO     | traces error code: 0
[2025-12-02 13:21:06] 2025-12-02 18:21:04,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 13:21:06] 2025-12-02 18:21:05,072 [wrapper] ==== pilot stdout END ====
[2025-12-02 13:21:06] 2025-12-02 18:21:05,105 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 13:21:06] 2025-12-02 18:21:05,118 [wrapper] pilotpid: 3534277
[2025-12-02 13:21:06] 2025-12-02 18:21:05,150 [wrapper] Pilot exit status: 0
[2025-12-02 13:21:06] 2025-12-02 18:21:05,265 [wrapper] pandaids: 6895340051
[2025-12-02 13:21:06] 2025-12-02 18:21:05,748 [wrapper] cleanup supervisor_pilot  751204 3534278
[2025-12-02 13:21:06] 2025-12-02 18:21:05,751 [wrapper] Test setup, not cleaning
[2025-12-02 13:21:06] 2025-12-02 18:21:05,758 [wrapper] apfmon messages muted
[2025-12-02 13:21:06] 2025-12-02 18:21:05,761 [wrapper] ==== wrapper stdout END ====
[2025-12-02 13:21:06] 2025-12-02 18:21:05,765 [wrapper] ==== wrapper stderr END ====
[2025-12-02 13:21:06]  *** Error codes and diagnostics ***
[2025-12-02 13:21:06]     "exeErrorCode": 0,
[2025-12-02 13:21:06]     "exeErrorDiag": "",
[2025-12-02 13:21:06]     "pilotErrorCode": 0,
[2025-12-02 13:21:06]     "pilotErrorDiag": "",
[2025-12-02 13:21:06]  *** Listing of results directory ***
[2025-12-02 13:21:06] total 1317124
[2025-12-02 13:21:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 07:20 pilot3.tar.gz
[2025-12-02 13:21:06] -rwx------. 1 boincer umatlas     36292 Nov 22 07:28 runpilot2-wrapper.sh
[2025-12-02 13:21:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 07:28 queuedata.json
[2025-12-02 13:21:06] -rw-r--r--. 1 boincer umatlas       100 Dec  2 03:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 13:21:06] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 03:42 run_atlas
[2025-12-02 13:21:06] -rw-r--r--. 1 boincer umatlas       105 Dec  2 03:42 job.xml
[2025-12-02 13:21:06] -rw-r--r--. 2 boincer umatlas 408986791 Dec  2 03:42 EVNT.47483658._000369.pool.root.1
[2025-12-02 13:21:06] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 03:42 start_atlas.sh
[2025-12-02 13:21:06] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 03:42 shared
[2025-12-02 13:21:06] -rw-r--r--. 2 boincer umatlas    590098 Dec  2 03:42 input.tar.gz
[2025-12-02 13:21:06] -rw-r--r--. 1 boincer umatlas         0 Dec  2 03:42 boinc_lockfile
[2025-12-02 13:21:06] -rw-r--r--. 1 boincer umatlas      2784 Dec  2 03:42 pandaJob.out
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas        57 Dec  2 03:42 setup.sh.local
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas    990249 Dec  2 03:42 agis_schedconf.cvmfs.json
[2025-12-02 13:21:06] drwx------. 5 boincer umatlas      4096 Dec  2 03:42 pilot3
[2025-12-02 13:21:06] -rw-r--r--. 1 boincer umatlas       533 Dec  2 12:58 boinc_task_state.xml
[2025-12-02 13:21:06] -rw-r--r--. 1 boincer umatlas      7173 Dec  2 13:09 init_data.xml
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas 923699802 Dec  2 13:17 HITS.47556137._003654.pool.root.1
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas      1049 Dec  2 13:18 memory_monitor_summary.json
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas   1516240 Dec  2 13:19 agis_ddmendpoints.agis.ALL.json
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas   2094828 Dec  2 13:19 log.47556137._003654.job.log.tgz.1
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas      8585 Dec  2 13:19 heartbeat.json
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas        95 Dec  2 13:20 pilot_heartbeat.json
[2025-12-02 13:21:06] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 13:21 boinc_mmap_file
[2025-12-02 13:21:06] -rw-r--r--. 1 boincer umatlas        29 Dec  2 13:21 wrapper_checkpoint.txt
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas      4826 Dec  2 13:21 pilotlog.txt
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas   3969944 Dec  2 13:21 log.47556137._003654.job.log.1
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas       353 Dec  2 13:21 output.list
[2025-12-02 13:21:06] -rw-r--r--. 1 boincer umatlas       620 Dec  2 13:21 runtime_log
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas   6082560 Dec  2 13:21 result.tar.gz
[2025-12-02 13:21:06] -rw-r--r--. 1 boincer umatlas      9340 Dec  2 13:21 runtime_log.err
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas       659 Dec  2 13:21 RmOKDmXu1g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmK9JKDmZV8iNm.diag
[2025-12-02 13:21:06] -rw-r--r--. 1 boincer umatlas     21780 Dec  2 13:21 stderr.txt
[2025-12-02 13:21:06] HITS file was successfully produced:
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas 923699802 Dec  2 13:17 shared/HITS.pool.root.1
[2025-12-02 13:21:06]  *** Contents of shared directory: ***
[2025-12-02 13:21:06] total 1308000
[2025-12-02 13:21:06] -rw-r--r--. 2 boincer umatlas 408986791 Dec  2 03:42 ATLAS.root_0
[2025-12-02 13:21:06] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 03:42 start_atlas.sh
[2025-12-02 13:21:06] -rw-r--r--. 2 boincer umatlas    590098 Dec  2 03:42 input.tar.gz
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas 923699802 Dec  2 13:17 HITS.pool.root.1
[2025-12-02 13:21:06] -rw-------. 1 boincer umatlas   6082560 Dec  2 13:21 result.tar.gz
13:21:07 (3521924): run_atlas exited; CPU time 137477.102462
13:21:07 (3521924): called boinc_finish(0)

</stderr_txt>
]]>

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