Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:04:37 (3638882): wrapper (7.7.26015): starting
04:04:37 (3638882): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 04:04:37] Arguments: --nthreads 8
[2025-12-02 04:04:37] Threads: 8
[2025-12-02 04:04:37] Checking for CVMFS
[2025-12-02 04:04:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 04:04:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 04:04:38] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 04:04:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 04:04:39] 2.13.3.0 14328 38464 287548 153549 0 767 30781151 40960001 46658 16776704 0 487378445 99.722 353683275 48985 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 04:04:39] CVMFS is ok
[2025-12-02 04:04:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 04:04:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 04:04:39] Further information can be found at the LHC@home message board.
[2025-12-02 04:04:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 04:04:39] Checking for apptainer binary...
[2025-12-02 04:04:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 04:04:39] Running /usr/bin/apptainer --version
[2025-12-02 04:04:39] apptainer version 1.4.4-1.el9
[2025-12-02 04:04:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 04:04:40] c8-16-2.aglt2.org
[2025-12-02 04:04:40] apptainer works
[2025-12-02 04:04:40] Set ATHENA_PROC_NUMBER=8
[2025-12-02 04:04:40] Set ATHENA_CORE_NUMBER=8
[2025-12-02 04:04:40] Starting ATLAS job with PandaID=6908987341
[2025-12-02 04:04:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 07:04:53]  *** The last 200 lines of the pilot log: ***
[2025-12-02 07:04:53] 2025-12-02 12:03:25,904 | INFO     | monitor loop #574: job 0:6908987341 is in state 'finished'
[2025-12-02 07:04:53] 2025-12-02 12:03:25,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 07:04:53] 2025-12-02 12:03:25,966 | INFO     | time since job start (10638s) is within the limit (172800.0s)
[2025-12-02 07:04:53] 2025-12-02 12:03:27,974 | INFO     | time since job start (10640s) is within the limit (172800.0s)
[2025-12-02 07:04:53] 2025-12-02 12:03:28,425 | INFO     | monitor loop #575: job 0:6908987341 is in state 'finished'
[2025-12-02 07:04:53] 2025-12-02 12:03:28,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 07:04:53] 2025-12-02 12:03:28,790 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-02 07:04:53] 2025-12-02 12:03:28,811 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.0287421874996
[2025-12-02 07:04:53] 2025-12-02 12:03:28,893 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6908987341/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 07:04:53] 2025-12-02 12:03:28,894 | INFO     | extracted standard info from prmon json
[2025-12-02 07:04:53] 2025-12-02 12:03:28,894 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 07:04:53] 2025-12-02 12:03:28,894 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 07:04:53] 2025-12-02 12:03:28,894 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-02 07:04:53] 2025-12-02 12:03:28,894 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-02 07:04:53] 2025-12-02 12:03:28,896 | INFO     | fitting pss+swap vs Time
[2025-12-02 07:04:53] 2025-12-02 12:03:28,896 | INFO     | sum of square deviations: 1550464956.5029268
[2025-12-02 07:04:53] 2025-12-02 12:03:28,897 | INFO     | sum of deviations: 41675649492.210556
[2025-12-02 07:04:53] 2025-12-02 12:03:28,897 | INFO     | mean x: 1764671726.0935671
[2025-12-02 07:04:53] 2025-12-02 12:03:28,904 | INFO     | mean y: 2513802.736842105
[2025-12-02 07:04:53] 2025-12-02 12:03:28,904 | INFO     | intersect: -47430896424.97176
[2025-12-02 07:04:53] 2025-12-02 12:03:28,904 | INFO     | chi2: 4.457486191264624
[2025-12-02 07:04:53] 2025-12-02 12:03:28,905 | INFO     | sum of square deviations: 1418402243.957839
[2025-12-02 07:04:53] 2025-12-02 12:03:28,905 | INFO     | sum of deviations: 52431058923.674706
[2025-12-02 07:04:53] 2025-12-02 12:03:28,905 | INFO     | mean x: 1764671573.5963855
[2025-12-02 07:04:53] 2025-12-02 12:03:28,905 | INFO     | mean y: 2525894.4578313255
[2025-12-02 07:04:53] 2025-12-02 12:03:28,905 | INFO     | intersect: -65228334850.652534
[2025-12-02 07:04:53] 2025-12-02 12:03:28,906 | INFO     | chi2: 3.6712612071578405
[2025-12-02 07:04:53] 2025-12-02 12:03:28,906 | INFO     | current chi2=3.6712612071578405 (change=17.638304424757514 %)
[2025-12-02 07:04:53] 2025-12-02 12:03:28,906 | INFO     | right removable region: 165
[2025-12-02 07:04:53] 2025-12-02 12:03:28,906 | INFO     | sum of square deviations: 1418392483.957839
[2025-12-02 07:04:53] 2025-12-02 12:03:28,914 | INFO     | sum of deviations: -9234462721.180725
[2025-12-02 07:04:53] 2025-12-02 12:03:28,914 | INFO     | mean x: 1764671878.5963855
[2025-12-02 07:04:53] 2025-12-02 12:03:28,914 | INFO     | mean y: 2572383.698795181
[2025-12-02 07:04:53] 2025-12-02 12:03:28,915 | INFO     | intersect: 11491491609.034075
[2025-12-02 07:04:53] 2025-12-02 12:03:28,915 | INFO     | chi2: 1.0802981174662252
[2025-12-02 07:04:53] 2025-12-02 12:03:28,915 | INFO     | current chi2=1.0802981174662252 (change=75.76440910611691 %)
[2025-12-02 07:04:53] 2025-12-02 12:03:28,915 | INFO     | sum of square deviations: 1294041086.4099364
[2025-12-02 07:04:53] 2025-12-02 12:03:28,915 | INFO     | sum of deviations: -21527123712.0559
[2025-12-02 07:04:53] 2025-12-02 12:03:28,915 | INFO     | mean x: 1764672031.0993788
[2025-12-02 07:04:53] 2025-12-02 12:03:28,915 | INFO     | mean y: 2587365.4409937887
[2025-12-02 07:04:53] 2025-12-02 12:03:28,915 | INFO     | intersect: 29358929697.717644
[2025-12-02 07:04:53] 2025-12-02 12:03:28,916 | INFO     | chi2: 0.8528504464660157
[2025-12-02 07:04:53] 2025-12-02 12:03:28,916 | INFO     | current chi2=0.8528504464660157 (change=21.0541578590986 %)
[2025-12-02 07:04:53] 2025-12-02 12:03:28,916 | INFO     | left removable region: 20
[2025-12-02 07:04:53] 2025-12-02 12:03:28,916 | INFO     | sum of square deviations: 945305062.2344829
[2025-12-02 07:04:53] 2025-12-02 12:03:28,924 | INFO     | sum of deviations: -8065915110.041378
[2025-12-02 07:04:53] 2025-12-02 12:03:28,925 | INFO     | mean x: 1764672153.110345
[2025-12-02 07:04:53] 2025-12-02 12:03:28,925 | INFO     | mean y: 2600610.627586207
[2025-12-02 07:04:53] 2025-12-02 12:03:28,925 | INFO     | intersect: 15059851812.051191
[2025-12-02 07:04:53] 2025-12-02 12:03:28,925 | INFO     | chi2: 0.00731144562365785
[2025-12-02 07:04:53] 2025-12-02 12:03:28,925 | INFO     | current memory leak: -8.53 B/s (using 145 data points, chi2=0.01)
[2025-12-02 07:04:53] 2025-12-02 12:03:28,925 | INFO     | could have reported an average CPU frequency of 3800 MHz (9 samples)
[2025-12-02 07:04:53] 2025-12-02 12:03:28,926 | INFO     | ..............................
[2025-12-02 07:04:53] 2025-12-02 12:03:28,926 | INFO     | . Timing measurements:
[2025-12-02 07:04:53] 2025-12-02 12:03:28,926 | INFO     | . get job = 0 s
[2025-12-02 07:04:53] 2025-12-02 12:03:28,926 | INFO     | . initial setup = 5 s
[2025-12-02 07:04:53] 2025-12-02 12:03:28,926 | INFO     | . payload setup = 50 s
[2025-12-02 07:04:53] 2025-12-02 12:03:28,926 | INFO     | . stage-in = 0 s
[2025-12-02 07:04:53] 2025-12-02 12:03:28,926 | INFO     | . payload execution = 10457 s
[2025-12-02 07:04:53] 2025-12-02 12:03:28,926 | INFO     | . stage-out = 3 s
[2025-12-02 07:04:53] 2025-12-02 12:03:28,926 | INFO     | . log creation = 1 s
[2025-12-02 07:04:53] 2025-12-02 12:03:28,926 | INFO     | ..............................
[2025-12-02 07:04:53] 2025-12-02 12:03:29,007 | INFO     | 
[2025-12-02 07:04:53] 2025-12-02 12:03:29,007 | INFO     | job summary report
[2025-12-02 07:04:53] 2025-12-02 12:03:29,007 | INFO     | --------------------------------------------------
[2025-12-02 07:04:53] 2025-12-02 12:03:29,007 | INFO     | PanDA job id: 6908987341
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | task id: 46965017
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | errors: (none)
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | pilot state: finished 
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | transexitcode: 0
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | exeerrorcode: 0
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | exeerrordiag: 
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | exitcode: 0
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | exitmsg: OK
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | cpuconsumptiontime: 28532 s
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | nevents: 400
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | neventsw: 0
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | pid: 3676216
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | pgrp: 3676216
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | corecount: 8
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | event service: False
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | sizes: {0: 2283753, 1: 2284008, 12: 2284008, 23: 2284036, 34: 2284064, 41: 2284354, 45: 2284510, 10512: 2313192, 10516: 2322190, 10519: 2322246, 10560: 2322504}
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | --------------------------------------------------
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | 
[2025-12-02 07:04:53] 2025-12-02 12:03:29,008 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-12-02 07:04:53] 2025-12-02 12:03:29,108 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | job 6908987341 has completed (purged errors)
[2025-12-02 07:04:53] 2025-12-02 12:03:29,109 | INFO     | overall cleanup function is called
[2025-12-02 07:04:53] 2025-12-02 12:03:30,135 | INFO     | --- collectZombieJob: --- 10, [3676216]
[2025-12-02 07:04:53] 2025-12-02 12:03:30,135 | INFO     | zombie collector waiting for pid 3676216
[2025-12-02 07:04:53] 2025-12-02 12:03:30,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 07:04:53] 2025-12-02 12:03:30,135 | INFO     | collected zombie processes
[2025-12-02 07:04:53] 2025-12-02 12:03:30,135 | INFO     | will attempt to kill all subprocesses of pid=3676216
[2025-12-02 07:04:53] 2025-12-02 12:03:31,813 | INFO     | process IDs to be killed: [3676216] (in reverse order)
[2025-12-02 07:04:53] 2025-12-02 12:03:32,379 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 07:04:53] 2025-12-02 12:03:32,380 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 07:04:53] 2025-12-02 12:03:32,462 | INFO     | did not find any defunct processes belonging to 3676216
[2025-12-02 07:04:53] 2025-12-02 12:03:32,610 | INFO     | did not find any defunct processes belonging to 3676216
[2025-12-02 07:04:53] 2025-12-02 12:03:32,613 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 07:04:53] 2025-12-02 12:03:32,613 | INFO     | ready for new job
[2025-12-02 07:04:53] 2025-12-02 12:03:32,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 07:04:53] 2025-12-02 12:03:32,616 | INFO     | ***************************************
[2025-12-02 07:04:53] 2025-12-02 12:03:32,616 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 07:04:53] 2025-12-02 12:03:32,616 | INFO     | ***************************************
[2025-12-02 07:04:53] 2025-12-02 12:03:32,616 | INFO     | 
[2025-12-02 07:04:53] 2025-12-02 12:03:32,621 | INFO     | architecture information:
[2025-12-02 07:04:53] 2025-12-02 12:03:32,625 | INFO     | executing command: cat /etc/os-release
[2025-12-02 07:04:53] 2025-12-02 12:03:32,711 | INFO     | cat /etc/os-release:
[2025-12-02 07:04:53] NAME="CentOS Linux"
[2025-12-02 07:04:53] VERSION="7 (Core)"
[2025-12-02 07:04:53] ID="centos"
[2025-12-02 07:04:53] ID_LIKE="rhel fedora"
[2025-12-02 07:04:53] VERSION_ID="7"
[2025-12-02 07:04:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 07:04:53] ANSI_COLOR="0;31"
[2025-12-02 07:04:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 07:04:53] HOME_URL="https://www.centos.org/"
[2025-12-02 07:04:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 07:04:53] 
[2025-12-02 07:04:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 07:04:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 07:04:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 07:04:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 07:04:53] 
[2025-12-02 07:04:53] 2025-12-02 12:03:32,711 | INFO     | ***************************************
[2025-12-02 07:04:53] 2025-12-02 12:03:33,214 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-12-02 07:04:53] 2025-12-02 12:03:33,291 | INFO     | sufficient remaining disk space (165534498816 B)
[2025-12-02 07:04:53] 2025-12-02 12:03:33,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 07:04:53] 2025-12-02 12:03:33,292 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 07:04:53] 2025-12-02 12:03:33,292 | INFO     | update_server=False
[2025-12-02 07:04:53] 2025-12-02 12:03:33,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 07:04:53] 2025-12-02 12:03:33,451 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-02 07:04:53] 2025-12-02 12:03:33,451 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-02 07:04:53] 2025-12-02 12:03:33,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 07:04:53] 2025-12-02 12:03:33,452 | INFO     | will abort loop
[2025-12-02 07:04:53] 2025-12-02 12:03:33,533 | INFO     | all job control threads have been joined
[2025-12-02 07:04:53] 2025-12-02 12:03:33,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 07:04:53] 2025-12-02 12:03:33,912 | INFO     | all data control threads have been joined
[2025-12-02 07:04:53] 2025-12-02 12:03:34,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 07:04:53] 2025-12-02 12:03:34,116 | INFO     | all payload control threads have been joined
[2025-12-02 07:04:53] 2025-12-02 12:03:34,297 | INFO     | [job] retrieve thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:34,458 | INFO     | [job] job monitor thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:34,539 | INFO     | [job] control thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:34,548 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:34,920 | INFO     | [data] control thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:35,009 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:35,063 | INFO     | [job] queue monitor thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:35,123 | INFO     | [payload] control thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:35,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:35,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 07:04:53] 2025-12-02 12:03:35,650 | INFO     | [data] copytool_out thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:35,671 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:35,709 | INFO     | [payload] validate_post thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:35,727 | INFO     | [job] validate thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:35,786 | INFO     | [data] copytool_in thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:35,844 | INFO     | [payload] failed_post thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:03:39,209 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 07:04:53] 2025-12-02 12:04:04,817 | INFO     | PID=3657645 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 07:04:53] 2025-12-02 12:04:04,818 | INFO     | .. there are 112 such processes running
[2025-12-02 07:04:53] 2025-12-02 12:04:04,818 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 07:04:53] 2025-12-02 12:04:04,818 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 07:04:53] 2025-12-02 12:04:04,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 07:04:53] 2025-12-02 12:04:25,694 | INFO     | [monitor] cgroup control has ended
[2025-12-02 07:04:53] 2025-12-02 12:04:27,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140235495761728)>', '<ExcThread(monitor, started 140235128149760)>']
[2025-12-02 07:04:53] 2025-12-02 12:04:28,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 07:04:53] 2025-12-02 12:04:28,017 | INFO     | [monitor] control thread has ended
[2025-12-02 07:04:53] 2025-12-02 12:04:32,415 | INFO     | all workflow threads have been joined
[2025-12-02 07:04:53] 2025-12-02 12:04:32,415 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 07:04:53] 2025-12-02 12:04:32,416 | INFO     | traces error code: 0
[2025-12-02 07:04:53] 2025-12-02 12:04:32,416 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 07:04:53] 2025-12-02 12:04:32,638 [wrapper] ==== pilot stdout END ====
[2025-12-02 07:04:53] 2025-12-02 12:04:32,671 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 07:04:53] 2025-12-02 12:04:32,698 [wrapper] pilotpid: 3657645
[2025-12-02 07:04:53] 2025-12-02 12:04:32,722 [wrapper] Pilot exit status: 0
[2025-12-02 07:04:53] 2025-12-02 12:04:32,854 [wrapper] pandaids: 6908987341
[2025-12-02 07:04:53] 2025-12-02 12:04:33,422 [wrapper] cleanup supervisor_pilot  907538 3657646
[2025-12-02 07:04:53] 2025-12-02 12:04:33,436 [wrapper] Test setup, not cleaning
[2025-12-02 07:04:53] 2025-12-02 12:04:33,447 [wrapper] apfmon messages muted
[2025-12-02 07:04:53] 2025-12-02 12:04:33,470 [wrapper] ==== wrapper stdout END ====
[2025-12-02 07:04:53] 2025-12-02 12:04:33,497 [wrapper] ==== wrapper stderr END ====
[2025-12-02 07:04:53]  *** Error codes and diagnostics ***
[2025-12-02 07:04:53]     "exeErrorCode": 0,
[2025-12-02 07:04:53]     "exeErrorDiag": "",
[2025-12-02 07:04:53]     "pilotErrorCode": 0,
[2025-12-02 07:04:53]     "pilotErrorDiag": "",
[2025-12-02 07:04:53]  *** Listing of results directory ***
[2025-12-02 07:04:53] total 469708
[2025-12-02 07:04:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 30 06:05 pilot3.tar.gz
[2025-12-02 07:04:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 30 06:08 queuedata.json
[2025-12-02 07:04:53] -rwx------. 1 boincer umatlas     36292 Nov 30 06:08 runpilot2-wrapper.sh
[2025-12-02 07:04:53] -rw-r--r--. 1 boincer umatlas       100 Dec  2 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 07:04:53] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 04:04 run_atlas
[2025-12-02 07:04:53] -rw-r--r--. 1 boincer umatlas       105 Dec  2 04:04 job.xml
[2025-12-02 07:04:53] -rw-r--r--. 2 boincer umatlas 276483200 Dec  2 04:04 EVNT.46965009._000058.pool.root.1
[2025-12-02 07:04:53] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 04:04 start_atlas.sh
[2025-12-02 07:04:53] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 04:04 shared
[2025-12-02 07:04:53] -rw-r--r--. 2 boincer umatlas    589975 Dec  2 04:04 input.tar.gz
[2025-12-02 07:04:53] -rw-r--r--. 1 boincer umatlas         0 Dec  2 04:04 boinc_lockfile
[2025-12-02 07:04:53] -rw-r--r--. 1 boincer umatlas      2652 Dec  2 04:04 pandaJob.out
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas        57 Dec  2 04:04 setup.sh.local
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas    990249 Dec  2 04:06 agis_schedconf.cvmfs.json
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas   1516240 Dec  2 04:06 agis_ddmendpoints.agis.ALL.json
[2025-12-02 07:04:53] drwx------. 5 boincer umatlas      4096 Dec  2 04:06 pilot3
[2025-12-02 07:04:53] -rw-r--r--. 1 boincer umatlas      7172 Dec  2 07:00 init_data.xml
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas 197363904 Dec  2 07:01 HITS.46965017._001499.pool.root.1
[2025-12-02 07:04:53] -rw-r--r--. 1 boincer umatlas       530 Dec  2 07:01 boinc_task_state.xml
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas      1035 Dec  2 07:02 memory_monitor_summary.json
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas    380728 Dec  2 07:02 log.46965017._001499.job.log.tgz.1
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas        95 Dec  2 07:03 pilot_heartbeat.json
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas      7776 Dec  2 07:03 heartbeat.json
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas      5012 Dec  2 07:04 pilotlog.txt
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas   1231727 Dec  2 07:04 log.46965017._001499.job.log.1
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas       357 Dec  2 07:04 output.list
[2025-12-02 07:04:53] -rw-r--r--. 1 boincer umatlas       620 Dec  2 07:04 runtime_log
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas   1628160 Dec  2 07:04 result.tar.gz
[2025-12-02 07:04:53] -rw-r--r--. 1 boincer umatlas      9338 Dec  2 07:04 runtime_log.err
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas       654 Dec  2 07:04 3IuLDmITuj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEdPKDmzEOP3n.diag
[2025-12-02 07:04:53] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 07:04 boinc_mmap_file
[2025-12-02 07:04:53] -rw-r--r--. 1 boincer umatlas        27 Dec  2 07:04 wrapper_checkpoint.txt
[2025-12-02 07:04:53] -rw-r--r--. 1 boincer umatlas     21531 Dec  2 07:04 stderr.txt
[2025-12-02 07:04:53] HITS file was successfully produced:
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas 197363904 Dec  2 07:01 shared/HITS.pool.root.1
[2025-12-02 07:04:53]  *** Contents of shared directory: ***
[2025-12-02 07:04:53] total 464940
[2025-12-02 07:04:53] -rw-r--r--. 2 boincer umatlas 276483200 Dec  2 04:04 ATLAS.root_0
[2025-12-02 07:04:53] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 04:04 start_atlas.sh
[2025-12-02 07:04:53] -rw-r--r--. 2 boincer umatlas    589975 Dec  2 04:04 input.tar.gz
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas 197363904 Dec  2 07:01 HITS.pool.root.1
[2025-12-02 07:04:53] -rw-------. 1 boincer umatlas   1628160 Dec  2 07:04 result.tar.gz
07:04:55 (3638882): run_atlas exited; CPU time 28947.050279
07:04:55 (3638882): called boinc_finish(0)

</stderr_txt>
]]>

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