Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:04:00 (1166890): wrapper (7.7.26015): starting
04:04:00 (1166890): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 04:04:00] Arguments: --nthreads 8
[2025-12-02 04:04:00] Threads: 8
[2025-12-02 04:04:00] Checking for CVMFS
[2025-12-02 04:04:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 04:04:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 04:04:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 04:04:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 04:04:02] 2.13.3.0 11888 38439 378900 153549 0 413 28993500 32935936 31012 16776704 0 201435810 99.515 251467715 35033 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 04:04:02] CVMFS is ok
[2025-12-02 04:04:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 04:04:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 04:04:02] Further information can be found at the LHC@home message board.
[2025-12-02 04:04:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 04:04:02] Checking for apptainer binary...
[2025-12-02 04:04:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 04:04:02] Running /usr/bin/apptainer --version
[2025-12-02 04:04:02] apptainer version 1.4.4-1.el9
[2025-12-02 04:04:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 04:04:03] c6-2-11-3.aglt2.org
[2025-12-02 04:04:03] apptainer works
[2025-12-02 04:04:03] Set ATHENA_PROC_NUMBER=8
[2025-12-02 04:04:03] Set ATHENA_CORE_NUMBER=8
[2025-12-02 04:04:03] Starting ATLAS job with PandaID=6908987379
[2025-12-02 04:04:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 08:11:10]  *** The last 200 lines of the pilot log: ***
[2025-12-02 08:11:10] 2025-12-02 13:09:58,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 08:11:10] 2025-12-02 13:09:59,378 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-02 08:11:10] 2025-12-02 13:09:59,401 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2714.181885416666
[2025-12-02 08:11:10] 2025-12-02 13:09:59,418 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6908987379/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 08:11:10] 2025-12-02 13:09:59,419 | INFO     | extracted standard info from prmon json
[2025-12-02 08:11:10] 2025-12-02 13:09:59,419 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 08:11:10] 2025-12-02 13:09:59,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 08:11:10] 2025-12-02 13:09:59,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-02 08:11:10] 2025-12-02 13:09:59,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-02 08:11:10] 2025-12-02 13:09:59,424 | INFO     | fitting pss+swap vs Time
[2025-12-02 08:11:10] 2025-12-02 13:09:59,425 | INFO     | sum of square deviations: 4286587236.7958508
[2025-12-02 08:11:10] 2025-12-02 13:09:59,426 | INFO     | sum of deviations: 27331498270.733364
[2025-12-02 08:11:10] 2025-12-02 13:09:59,426 | INFO     | mean x: 1764673643.6958334
[2025-12-02 08:11:10] 2025-12-02 13:09:59,426 | INFO     | mean y: 2502544.1333333333
[2025-12-02 08:11:10] 2025-12-02 13:09:59,426 | INFO     | intersect: -11249146372.997623
[2025-12-02 08:11:10] 2025-12-02 13:09:59,427 | INFO     | chi2: 3.3740343942777415
[2025-12-02 08:11:10] 2025-12-02 13:09:59,427 | INFO     | sum of square deviations: 4024233861.5999875
[2025-12-02 08:11:10] 2025-12-02 13:09:59,429 | INFO     | sum of deviations: 58858780471.00001
[2025-12-02 08:11:10] 2025-12-02 13:09:59,429 | INFO     | mean x: 1764673491.2
[2025-12-02 08:11:10] 2025-12-02 13:09:59,429 | INFO     | mean y: 2520635.425531915
[2025-12-02 08:11:10] 2025-12-02 13:09:59,429 | INFO     | intersect: -25807741191.71338
[2025-12-02 08:11:10] 2025-12-02 13:09:59,429 | INFO     | chi2: 1.7902532338986747
[2025-12-02 08:11:10] 2025-12-02 13:09:59,430 | INFO     | current chi2=1.7902532338986747 (change=46.940279063696295 %)
[2025-12-02 08:11:10] 2025-12-02 13:09:59,430 | INFO     | sum of square deviations: 3772796832.3000007
[2025-12-02 08:11:10] 2025-12-02 13:09:59,431 | INFO     | sum of deviations: 57413126036.60001
[2025-12-02 08:11:10] 2025-12-02 13:09:59,431 | INFO     | mean x: 1764673338.7
[2025-12-02 08:11:10] 2025-12-02 13:09:59,432 | INFO     | mean y: 2519758.486956522
[2025-12-02 08:11:10] 2025-12-02 13:09:59,432 | INFO     | intersect: -26851672850.248398
[2025-12-02 08:11:10] 2025-12-02 13:09:59,432 | INFO     | chi2: 1.7904568712912394
[2025-12-02 08:11:10] 2025-12-02 13:09:59,432 | INFO     | current chi2=1.7904568712912394 (change=-0.01137478143922779 %)
[2025-12-02 08:11:10] 2025-12-02 13:09:59,432 | INFO     | right removable region: 229
[2025-12-02 08:11:10] 2025-12-02 13:09:59,433 | INFO     | sum of square deviations: 4024205191.5999875
[2025-12-02 08:11:10] 2025-12-02 13:09:59,434 | INFO     | sum of deviations: -18525472082.199997
[2025-12-02 08:11:10] 2025-12-02 13:09:59,434 | INFO     | mean x: 1764673796.2
[2025-12-02 08:11:10] 2025-12-02 13:09:59,434 | INFO     | mean y: 2529014.685106383
[2025-12-02 08:11:10] 2025-12-02 13:09:59,434 | INFO     | intersect: 8126223903.288732
[2025-12-02 08:11:10] 2025-12-02 13:09:59,435 | INFO     | chi2: 1.6623227554362605
[2025-12-02 08:11:10] 2025-12-02 13:09:59,435 | INFO     | current chi2=1.6623227554362605 (change=50.731896561116606 %)
[2025-12-02 08:11:10] 2025-12-02 13:09:59,435 | INFO     | sum of square deviations: 3772782008.695646
[2025-12-02 08:11:10] 2025-12-02 13:09:59,436 | INFO     | sum of deviations: -25475950280.26087
[2025-12-02 08:11:10] 2025-12-02 13:09:59,437 | INFO     | mean x: 1764673948.6956522
[2025-12-02 08:11:10] 2025-12-02 13:09:59,437 | INFO     | mean y: 2533219.639130435
[2025-12-02 08:11:10] 2025-12-02 13:09:59,437 | INFO     | intersect: 11918606206.15786
[2025-12-02 08:11:10] 2025-12-02 13:09:59,437 | INFO     | chi2: 1.6293947132499644
[2025-12-02 08:11:10] 2025-12-02 13:09:59,437 | INFO     | current chi2=1.6293947132499644 (change=1.980845300866644 %)
[2025-12-02 08:11:10] 2025-12-02 13:09:59,437 | INFO     | left removable region: 20
[2025-12-02 08:11:10] 2025-12-02 13:09:59,438 | INFO     | sum of square deviations: 2830888292.956949
[2025-12-02 08:11:10] 2025-12-02 13:09:59,439 | INFO     | sum of deviations: 2457168234.459331
[2025-12-02 08:11:10] 2025-12-02 13:09:59,439 | INFO     | mean x: 1764673918.1961722
[2025-12-02 08:11:10] 2025-12-02 13:09:59,439 | INFO     | mean y: 2554749.5741626793
[2025-12-02 08:11:10] 2025-12-02 13:09:59,439 | INFO     | intersect: -1529155529.0540798
[2025-12-02 08:11:10] 2025-12-02 13:09:59,439 | INFO     | chi2: 0.0011450917633477465
[2025-12-02 08:11:10] 2025-12-02 13:09:59,440 | INFO     | current memory leak: 0.87 B/s (using 209 data points, chi2=0.00)
[2025-12-02 08:11:10] 2025-12-02 13:09:59,440 | INFO     | could have reported an average CPU frequency of 2685 MHz (11 samples)
[2025-12-02 08:11:10] 2025-12-02 13:09:59,440 | INFO     | ..............................
[2025-12-02 08:11:10] 2025-12-02 13:09:59,440 | INFO     | . Timing measurements:
[2025-12-02 08:11:10] 2025-12-02 13:09:59,441 | INFO     | . get job = 0 s
[2025-12-02 08:11:10] 2025-12-02 13:09:59,441 | INFO     | . initial setup = 3 s
[2025-12-02 08:11:10] 2025-12-02 13:09:59,441 | INFO     | . payload setup = 21 s
[2025-12-02 08:11:10] 2025-12-02 13:09:59,441 | INFO     | . stage-in = 0 s
[2025-12-02 08:11:10] 2025-12-02 13:09:59,441 | INFO     | . payload execution = 14615 s
[2025-12-02 08:11:10] 2025-12-02 13:09:59,441 | INFO     | . stage-out = 7 s
[2025-12-02 08:11:10] 2025-12-02 13:09:59,441 | INFO     | . log creation = 1 s
[2025-12-02 08:11:10] 2025-12-02 13:09:59,441 | INFO     | ..............................
[2025-12-02 08:11:10] 2025-12-02 13:09:59,690 | INFO     | 
[2025-12-02 08:11:10] 2025-12-02 13:09:59,690 | INFO     | job summary report
[2025-12-02 08:11:10] 2025-12-02 13:09:59,691 | INFO     | --------------------------------------------------
[2025-12-02 08:11:10] 2025-12-02 13:09:59,691 | INFO     | PanDA job id: 6908987379
[2025-12-02 08:11:10] 2025-12-02 13:09:59,691 | INFO     | task id: 46965017
[2025-12-02 08:11:10] 2025-12-02 13:09:59,691 | INFO     | errors: (none)
[2025-12-02 08:11:10] 2025-12-02 13:09:59,691 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 08:11:10] 2025-12-02 13:09:59,691 | INFO     | pilot state: finished 
[2025-12-02 08:11:10] 2025-12-02 13:09:59,691 | INFO     | transexitcode: 0
[2025-12-02 08:11:10] 2025-12-02 13:09:59,691 | INFO     | exeerrorcode: 0
[2025-12-02 08:11:10] 2025-12-02 13:09:59,691 | INFO     | exeerrordiag: 
[2025-12-02 08:11:10] 2025-12-02 13:09:59,691 | INFO     | exitcode: 0
[2025-12-02 08:11:10] 2025-12-02 13:09:59,691 | INFO     | exitmsg: OK
[2025-12-02 08:11:10] 2025-12-02 13:09:59,691 | INFO     | cpuconsumptiontime: 46811 s
[2025-12-02 08:11:10] 2025-12-02 13:09:59,691 | INFO     | nevents: 400
[2025-12-02 08:11:10] 2025-12-02 13:09:59,692 | INFO     | neventsw: 0
[2025-12-02 08:11:10] 2025-12-02 13:09:59,692 | INFO     | pid: 1183785
[2025-12-02 08:11:10] 2025-12-02 13:09:59,692 | INFO     | pgrp: 1183785
[2025-12-02 08:11:10] 2025-12-02 13:09:59,692 | INFO     | corecount: 8
[2025-12-02 08:11:10] 2025-12-02 13:09:59,692 | INFO     | event service: False
[2025-12-02 08:11:10] 2025-12-02 13:09:59,692 | INFO     | sizes: {0: 2283809, 1: 2284008, 12: 2284008, 16: 2284298, 23: 2284326, 14641: 2315139, 14651: 2324193, 14684: 2324331}
[2025-12-02 08:11:10] 2025-12-02 13:09:59,692 | INFO     | --------------------------------------------------
[2025-12-02 08:11:10] 2025-12-02 13:09:59,692 | INFO     | 
[2025-12-02 08:11:10] 2025-12-02 13:09:59,692 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-02 08:11:10] 2025-12-02 13:09:59,775 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,776 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,776 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,776 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,776 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,776 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,776 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,776 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,777 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,777 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,777 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,777 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,777 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,777 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,777 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 08:11:10] 2025-12-02 13:09:59,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,777 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 08:11:10] 2025-12-02 13:09:59,777 | INFO     | job 6908987379 has completed (purged errors)
[2025-12-02 08:11:10] 2025-12-02 13:09:59,777 | INFO     | overall cleanup function is called
[2025-12-02 08:11:10] 2025-12-02 13:10:00,806 | INFO     | --- collectZombieJob: --- 10, [1183785]
[2025-12-02 08:11:10] 2025-12-02 13:10:00,806 | INFO     | zombie collector waiting for pid 1183785
[2025-12-02 08:11:10] 2025-12-02 13:10:00,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 08:11:10] 2025-12-02 13:10:00,807 | INFO     | collected zombie processes
[2025-12-02 08:11:10] 2025-12-02 13:10:00,807 | INFO     | will attempt to kill all subprocesses of pid=1183785
[2025-12-02 08:11:10] 2025-12-02 13:10:02,031 | INFO     | process IDs to be killed: [1183785] (in reverse order)
[2025-12-02 08:11:10] 2025-12-02 13:10:02,557 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 08:11:10] 2025-12-02 13:10:02,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 08:11:10] 2025-12-02 13:10:02,585 | INFO     | did not find any defunct processes belonging to 1183785
[2025-12-02 08:11:10] 2025-12-02 13:10:02,620 | INFO     | did not find any defunct processes belonging to 1183785
[2025-12-02 08:11:10] 2025-12-02 13:10:02,625 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 08:11:10] 2025-12-02 13:10:02,626 | INFO     | ready for new job
[2025-12-02 08:11:10] 2025-12-02 13:10:02,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 08:11:10] 2025-12-02 13:10:02,628 | INFO     | ***************************************
[2025-12-02 08:11:10] 2025-12-02 13:10:02,628 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 08:11:10] 2025-12-02 13:10:02,628 | INFO     | ***************************************
[2025-12-02 08:11:10] 2025-12-02 13:10:02,628 | INFO     | 
[2025-12-02 08:11:10] 2025-12-02 13:10:02,642 | INFO     | architecture information:
[2025-12-02 08:11:10] 2025-12-02 13:10:02,646 | INFO     | executing command: cat /etc/os-release
[2025-12-02 08:11:10] 2025-12-02 13:10:02,692 | INFO     | cat /etc/os-release:
[2025-12-02 08:11:10] NAME="CentOS Linux"
[2025-12-02 08:11:10] VERSION="7 (Core)"
[2025-12-02 08:11:10] ID="centos"
[2025-12-02 08:11:10] ID_LIKE="rhel fedora"
[2025-12-02 08:11:10] VERSION_ID="7"
[2025-12-02 08:11:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 08:11:10] ANSI_COLOR="0;31"
[2025-12-02 08:11:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 08:11:10] HOME_URL="https://www.centos.org/"
[2025-12-02 08:11:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 08:11:10] 
[2025-12-02 08:11:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 08:11:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 08:11:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 08:11:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 08:11:10] 
[2025-12-02 08:11:10] 2025-12-02 13:10:02,692 | INFO     | ***************************************
[2025-12-02 08:11:10] 2025-12-02 13:10:03,195 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-02 08:11:10] 2025-12-02 13:10:03,214 | INFO     | sufficient remaining disk space (71929167872 B)
[2025-12-02 08:11:10] 2025-12-02 13:10:03,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 08:11:10] 2025-12-02 13:10:03,214 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 08:11:10] 2025-12-02 13:10:03,215 | INFO     | update_server=False
[2025-12-02 08:11:10] 2025-12-02 13:10:03,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 08:11:10] 2025-12-02 13:10:03,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 08:11:10] 2025-12-02 13:10:03,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 08:11:10] 2025-12-02 13:10:03,215 | INFO     | aborting loop
[2025-12-02 08:11:10] 2025-12-02 13:10:03,382 | INFO     | all job control threads have been joined
[2025-12-02 08:11:10] 2025-12-02 13:10:03,486 | INFO     | all payload control threads have been joined
[2025-12-02 08:11:10] 2025-12-02 13:10:04,224 | INFO     | [job] retrieve thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:04,225 | INFO     | [job] job monitor thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:04,312 | INFO     | all data control threads have been joined
[2025-12-02 08:11:10] 2025-12-02 13:10:04,388 | INFO     | [job] control thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:04,492 | INFO     | [payload] control thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:04,533 | INFO     | [data] copytool_in thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:04,688 | INFO     | [job] validate thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:04,692 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:04,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 08:11:10] 2025-12-02 13:10:04,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 08:11:10] 2025-12-02 13:10:05,039 | INFO     | [payload] failed_post thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:05,232 | INFO     | [data] copytool_out thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:05,318 | INFO     | [data] control thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:05,404 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:05,634 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:05,635 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:05,719 | INFO     | [payload] validate_post thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:05,729 | INFO     | [job] queue monitor thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:08,799 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 08:11:10] 2025-12-02 13:10:33,696 | INFO     | PID=1176465 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 08:11:10] 2025-12-02 13:10:33,696 | INFO     | .. there are 66 such processes running
[2025-12-02 08:11:10] 2025-12-02 13:10:33,723 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 08:11:10] 2025-12-02 13:10:33,724 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 08:11:10] 2025-12-02 13:10:33,724 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 08:11:10] 2025-12-02 13:11:01,463 | INFO     | [monitor] cgroup control has ended
[2025-12-02 08:11:10] 2025-12-02 13:11:03,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140020957005632)>', '<ExcThread(monitor, started 140020027488000)>']
[2025-12-02 08:11:10] 2025-12-02 13:11:03,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 08:11:10] 2025-12-02 13:11:03,918 | INFO     | [monitor] control thread has ended
[2025-12-02 08:11:10] 2025-12-02 13:11:08,592 | INFO     | all workflow threads have been joined
[2025-12-02 08:11:10] 2025-12-02 13:11:08,593 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 08:11:10] 2025-12-02 13:11:08,593 | INFO     | traces error code: 0
[2025-12-02 08:11:10] 2025-12-02 13:11:08,593 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 08:11:10] 2025-12-02 13:11:08,867 [wrapper] ==== pilot stdout END ====
[2025-12-02 08:11:10] 2025-12-02 13:11:08,878 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 08:11:10] 2025-12-02 13:11:08,892 [wrapper] pilotpid: 1176465
[2025-12-02 08:11:10] 2025-12-02 13:11:08,918 [wrapper] Pilot exit status: 0
[2025-12-02 08:11:10] 2025-12-02 13:11:09,085 [wrapper] pandaids: 6908987379
[2025-12-02 08:11:10] 2025-12-02 13:11:09,558 [wrapper] cleanup supervisor_pilot 2346853 1176466
[2025-12-02 08:11:10] 2025-12-02 13:11:09,582 [wrapper] Test setup, not cleaning
[2025-12-02 08:11:10] 2025-12-02 13:11:09,606 [wrapper] apfmon messages muted
[2025-12-02 08:11:10] 2025-12-02 13:11:09,625 [wrapper] ==== wrapper stdout END ====
[2025-12-02 08:11:10] 2025-12-02 13:11:09,641 [wrapper] ==== wrapper stderr END ====
[2025-12-02 08:11:10]  *** Error codes and diagnostics ***
[2025-12-02 08:11:10]     "exeErrorCode": 0,
[2025-12-02 08:11:10]     "exeErrorDiag": "",
[2025-12-02 08:11:10]     "pilotErrorCode": 0,
[2025-12-02 08:11:10]     "pilotErrorDiag": "",
[2025-12-02 08:11:10]  *** Listing of results directory ***
[2025-12-02 08:11:10] total 473640
[2025-12-02 08:11:10] -rw-r--r--. 1 boincer umatlas    576529 Nov 30 06:05 pilot3.tar.gz
[2025-12-02 08:11:10] -rwx------. 1 boincer umatlas     36292 Nov 30 06:08 runpilot2-wrapper.sh
[2025-12-02 08:11:10] -rw-r--r--. 1 boincer umatlas      5112 Nov 30 06:08 queuedata.json
[2025-12-02 08:11:10] -rw-r--r--. 1 boincer umatlas       100 Dec  2 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 08:11:10] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 04:04 run_atlas
[2025-12-02 08:11:10] -rw-r--r--. 1 boincer umatlas       105 Dec  2 04:04 job.xml
[2025-12-02 08:11:10] -rw-r--r--. 2 boincer umatlas 275592293 Dec  2 04:04 EVNT.46965009._000059.pool.root.1
[2025-12-02 08:11:10] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 04:04 start_atlas.sh
[2025-12-02 08:11:10] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 04:04 shared
[2025-12-02 08:11:10] -rw-r--r--. 2 boincer umatlas    589974 Dec  2 04:04 input.tar.gz
[2025-12-02 08:11:10] -rw-r--r--. 1 boincer umatlas         0 Dec  2 04:04 boinc_lockfile
[2025-12-02 08:11:10] -rw-r--r--. 1 boincer umatlas      2652 Dec  2 04:04 pandaJob.out
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas        57 Dec  2 04:04 setup.sh.local
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas    990249 Dec  2 04:04 agis_schedconf.cvmfs.json
[2025-12-02 08:11:10] drwx------. 5 boincer umatlas      4096 Dec  2 04:04 pilot3
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas 201078666 Dec  2 08:07 HITS.46965017._001537.pool.root.1
[2025-12-02 08:11:10] -rw-r--r--. 1 boincer umatlas       531 Dec  2 08:07 boinc_task_state.xml
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas      1042 Dec  2 08:09 memory_monitor_summary.json
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas   1516240 Dec  2 08:09 agis_ddmendpoints.agis.ALL.json
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas    456754 Dec  2 08:09 log.46965017._001537.job.log.tgz.1
[2025-12-02 08:11:10] -rw-r--r--. 1 boincer umatlas      6877 Dec  2 08:09 init_data.xml
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas      7824 Dec  2 08:09 heartbeat.json
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas        95 Dec  2 08:10 pilot_heartbeat.json
[2025-12-02 08:11:10] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 08:11 boinc_mmap_file
[2025-12-02 08:11:10] -rw-r--r--. 1 boincer umatlas        28 Dec  2 08:11 wrapper_checkpoint.txt
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas      4824 Dec  2 08:11 pilotlog.txt
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas   1752362 Dec  2 08:11 log.46965017._001537.job.log.1
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas       357 Dec  2 08:11 output.list
[2025-12-02 08:11:10] -rw-r--r--. 1 boincer umatlas       620 Dec  2 08:11 runtime_log
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas   2232320 Dec  2 08:11 result.tar.gz
[2025-12-02 08:11:10] -rw-r--r--. 1 boincer umatlas      9348 Dec  2 08:11 runtime_log.err
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas       656 Dec  2 08:11 0rhMDmITuj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpdPKDmrzb1Uo.diag
[2025-12-02 08:11:10] -rw-r--r--. 1 boincer umatlas     21297 Dec  2 08:11 stderr.txt
[2025-12-02 08:11:10] HITS file was successfully produced:
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas 201078666 Dec  2 08:07 shared/HITS.pool.root.1
[2025-12-02 08:11:10]  *** Contents of shared directory: ***
[2025-12-02 08:11:10] total 468288
[2025-12-02 08:11:10] -rw-r--r--. 2 boincer umatlas 275592293 Dec  2 04:04 ATLAS.root_0
[2025-12-02 08:11:10] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 04:04 start_atlas.sh
[2025-12-02 08:11:10] -rw-r--r--. 2 boincer umatlas    589974 Dec  2 04:04 input.tar.gz
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas 201078666 Dec  2 08:07 HITS.pool.root.1
[2025-12-02 08:11:10] -rw-------. 1 boincer umatlas   2232320 Dec  2 08:11 result.tar.gz
08:11:11 (1166890): run_atlas exited; CPU time 47658.254024
08:11:11 (1166890): called boinc_finish(0)

</stderr_txt>
]]>

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