Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:00:14 (1689763): wrapper (7.7.26015): starting
16:00:14 (1689763): wrapper: running run_atlas (--nthreads 12)
[2025-12-02 16:00:14] Arguments: --nthreads 12
[2025-12-02 16:00:14] Threads: 12
[2025-12-02 16:00:14] Checking for CVMFS
[2025-12-02 16:00:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 16:00:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 16:00:15] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 16:00:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 16:00:15] 2.13.3.0 9777 15849 111140 153550 2 109 3448647 4097025 1037 130560 0 12079479 99.928 1345273 1702 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-12-02 16:00:15] CVMFS is ok
[2025-12-02 16:00:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 16:00:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 16:00:15] Further information can be found at the LHC@home message board.
[2025-12-02 16:00:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 16:00:15] Checking for apptainer binary...
[2025-12-02 16:00:15] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-12-02 16:00:15] apptainer is not installed, using version from CVMFS
[2025-12-02 16:00:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 16:00:15] pckelar6.cern.ch
[2025-12-02 16:00:15] apptainer works
[2025-12-02 16:00:15] Set ATHENA_PROC_NUMBER=12
[2025-12-02 16:00:15] Set ATHENA_CORE_NUMBER=12
[2025-12-02 16:00:15] Starting ATLAS job with PandaID=6901272082
[2025-12-02 16:00:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 02:19:34]  *** The last 200 lines of the pilot log: ***
[2025-12-03 02:19:34] 2025-12-03 01:18:58,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 02:19:34] 2025-12-03 01:18:58,546 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-03 02:19:34] 2025-12-03 01:18:58,552 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2808.363666666666
[2025-12-03 02:19:34] 2025-12-03 01:18:58,558 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6901272082/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 02:19:34] 2025-12-03 01:18:58,558 | INFO     | extracted standard info from prmon json
[2025-12-03 02:19:34] 2025-12-03 01:18:58,559 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 02:19:34] 2025-12-03 01:18:58,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 02:19:34] 2025-12-03 01:18:58,576 | INFO     | fitting pss+swap vs Time
[2025-12-03 02:19:34] 2025-12-03 01:18:58,577 | INFO     | sum of square deviations: 69692523501.52481
[2025-12-03 02:19:34] 2025-12-03 01:18:58,590 | INFO     | sum of deviations: 1351830879461.4546
[2025-12-03 02:19:34] 2025-12-03 01:18:58,591 | INFO     | mean x: 1764706173.4720395
[2025-12-03 02:19:34] 2025-12-03 01:18:58,591 | INFO     | mean y: 4137135.085526316
[2025-12-03 02:19:34] 2025-12-03 01:18:58,591 | INFO     | intersect: -34225995146.22828
[2025-12-03 02:19:34] 2025-12-03 01:18:58,592 | INFO     | chi2: 6.650366716877979
[2025-12-03 02:19:34] 2025-12-03 01:18:58,593 | INFO     | sum of square deviations: 67987406661.76119
[2025-12-03 02:19:34] 2025-12-03 01:18:58,606 | INFO     | sum of deviations: 1638992456878.8953
[2025-12-03 02:19:34] 2025-12-03 01:18:58,606 | INFO     | mean x: 1764706020.9800994
[2025-12-03 02:19:34] 2025-12-03 01:18:58,606 | INFO     | mean y: 4162804.7412935323
[2025-12-03 02:19:34] 2025-12-03 01:18:58,606 | INFO     | intersect: -42538125524.98726
[2025-12-03 02:19:34] 2025-12-03 01:18:58,607 | INFO     | chi2: 3.51357728531421
[2025-12-03 02:19:34] 2025-12-03 01:18:58,607 | INFO     | current chi2=3.51357728531421 (change=47.16716483623233 %)
[2025-12-03 02:19:34] 2025-12-03 01:18:58,608 | INFO     | sum of square deviations: 66310336859.41797
[2025-12-03 02:19:34] 2025-12-03 01:18:58,621 | INFO     | sum of deviations: 1755504847874.5894
[2025-12-03 02:19:34] 2025-12-03 01:18:58,621 | INFO     | mean x: 1764705868.4882944
[2025-12-03 02:19:34] 2025-12-03 01:18:58,621 | INFO     | mean y: 4173381.1555183944
[2025-12-03 02:19:34] 2025-12-03 01:18:58,622 | INFO     | intersect: -46714782575.46681
[2025-12-03 02:19:34] 2025-12-03 01:18:58,622 | INFO     | chi2: 2.7737023171359114
[2025-12-03 02:19:34] 2025-12-03 01:18:58,623 | INFO     | current chi2=2.7737023171359114 (change=21.05759765896636 %)
[2025-12-03 02:19:34] 2025-12-03 01:18:58,623 | INFO     | right removable region: 597
[2025-12-03 02:19:34] 2025-12-03 01:18:58,624 | INFO     | sum of square deviations: 67987082996.719635
[2025-12-03 02:19:34] 2025-12-03 01:18:58,637 | INFO     | sum of deviations: 1087446670762.6248
[2025-12-03 02:19:34] 2025-12-03 01:18:58,637 | INFO     | mean x: 1764706325.9784412
[2025-12-03 02:19:34] 2025-12-03 01:18:58,637 | INFO     | mean y: 4160738.048092869
[2025-12-03 02:19:34] 2025-12-03 01:18:58,637 | INFO     | intersect: -28222142472.395454
[2025-12-03 02:19:34] 2025-12-03 01:18:58,638 | INFO     | chi2: 4.097085133361584
[2025-12-03 02:19:34] 2025-12-03 01:18:58,638 | INFO     | current chi2=4.097085133361584 (change=38.39309457982846 %)
[2025-12-03 02:19:34] 2025-12-03 01:18:58,639 | INFO     | sum of square deviations: 66309836909.21736
[2025-12-03 02:19:34] 2025-12-03 01:18:58,652 | INFO     | sum of deviations: 1009882694675.8256
[2025-12-03 02:19:34] 2025-12-03 01:18:58,652 | INFO     | mean x: 1764706478.4782608
[2025-12-03 02:19:34] 2025-12-03 01:18:58,652 | INFO     | mean y: 4167787.8327759197
[2025-12-03 02:19:34] 2025-12-03 01:18:58,652 | INFO     | intersect: -26871882838.522884
[2025-12-03 02:19:34] 2025-12-03 01:18:58,653 | INFO     | chi2: 4.010082626478594
[2025-12-03 02:19:34] 2025-12-03 01:18:58,654 | INFO     | current chi2=4.010082626478594 (change=2.1235220663234267 %)
[2025-12-03 02:19:34] 2025-12-03 01:18:58,654 | INFO     | left removable region: 20
[2025-12-03 02:19:34] 2025-12-03 01:18:58,655 | INFO     | sum of square deviations: 59566805611.99302
[2025-12-03 02:19:34] 2025-12-03 01:18:58,666 | INFO     | sum of deviations: 1305219227909.7412
[2025-12-03 02:19:34] 2025-12-03 01:18:58,667 | INFO     | mean x: 1764706447.9965339
[2025-12-03 02:19:34] 2025-12-03 01:18:58,667 | INFO     | mean y: 4216602.870017331
[2025-12-03 02:19:34] 2025-12-03 01:18:58,667 | INFO     | intersect: -38663775811.30826
[2025-12-03 02:19:34] 2025-12-03 01:18:58,668 | INFO     | chi2: 0.025201730506395115
[2025-12-03 02:19:34] 2025-12-03 01:18:58,668 | INFO     | current memory leak: 21.91 B/s (using 577 data points, chi2=0.03)
[2025-12-03 02:19:34] 2025-12-03 01:18:58,669 | INFO     | could have reported an average CPU frequency of 2802 MHz (23 samples)
[2025-12-03 02:19:34] 2025-12-03 01:18:58,669 | INFO     | ..............................
[2025-12-03 02:19:34] 2025-12-03 01:18:58,670 | INFO     | . Timing measurements:
[2025-12-03 02:19:34] 2025-12-03 01:18:58,670 | INFO     | . get job = 0 s
[2025-12-03 02:19:34] 2025-12-03 01:18:58,670 | INFO     | . initial setup = 1 s
[2025-12-03 02:19:34] 2025-12-03 01:18:58,670 | INFO     | . payload setup = 12 s
[2025-12-03 02:19:34] 2025-12-03 01:18:58,670 | INFO     | . stage-in = 0 s
[2025-12-03 02:19:34] 2025-12-03 01:18:58,670 | INFO     | . payload execution = 37065 s
[2025-12-03 02:19:34] 2025-12-03 01:18:58,671 | INFO     | . stage-out = 2 s
[2025-12-03 02:19:34] 2025-12-03 01:18:58,671 | INFO     | . log creation = 0 s
[2025-12-03 02:19:34] 2025-12-03 01:18:58,671 | INFO     | ..............................
[2025-12-03 02:19:34] 2025-12-03 01:18:58,826 | INFO     | 
[2025-12-03 02:19:34] 2025-12-03 01:18:58,827 | INFO     | job summary report
[2025-12-03 02:19:34] 2025-12-03 01:18:58,827 | INFO     | --------------------------------------------------
[2025-12-03 02:19:34] 2025-12-03 01:18:58,827 | INFO     | PanDA job id: 6901272082
[2025-12-03 02:19:34] 2025-12-03 01:18:58,827 | INFO     | task id: 47531058
[2025-12-03 02:19:34] 2025-12-03 01:18:58,828 | INFO     | errors: (none)
[2025-12-03 02:19:34] 2025-12-03 01:18:58,828 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 02:19:34] 2025-12-03 01:18:58,828 | INFO     | pilot state: finished 
[2025-12-03 02:19:34] 2025-12-03 01:18:58,828 | INFO     | transexitcode: 0
[2025-12-03 02:19:34] 2025-12-03 01:18:58,828 | INFO     | exeerrorcode: 0
[2025-12-03 02:19:34] 2025-12-03 01:18:58,828 | INFO     | exeerrordiag: 
[2025-12-03 02:19:34] 2025-12-03 01:18:58,829 | INFO     | exitcode: 0
[2025-12-03 02:19:34] 2025-12-03 01:18:58,829 | INFO     | exitmsg: OK
[2025-12-03 02:19:34] 2025-12-03 01:18:58,829 | INFO     | cpuconsumptiontime: 426197 s
[2025-12-03 02:19:34] 2025-12-03 01:18:58,829 | INFO     | nevents: 1000
[2025-12-03 02:19:34] 2025-12-03 01:18:58,829 | INFO     | neventsw: 0
[2025-12-03 02:19:34] 2025-12-03 01:18:58,829 | INFO     | pid: 1701748
[2025-12-03 02:19:34] 2025-12-03 01:18:58,830 | INFO     | pgrp: 1701748
[2025-12-03 02:19:34] 2025-12-03 01:18:58,830 | INFO     | corecount: 12
[2025-12-03 02:19:34] 2025-12-03 01:18:58,830 | INFO     | event service: False
[2025-12-03 02:19:34] 2025-12-03 01:18:58,830 | INFO     | sizes: {0: 2284447, 1: 2284447, 6: 2284737, 12: 2284765, 37081: 2344977, 37084: 2353971, 37087: 2354155, 37097: 2354401}
[2025-12-03 02:19:34] 2025-12-03 01:18:58,830 | INFO     | --------------------------------------------------
[2025-12-03 02:19:34] 2025-12-03 01:18:58,830 | INFO     | 
[2025-12-03 02:19:34] 2025-12-03 01:18:58,831 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-12-03 02:19:34] 2025-12-03 01:18:58,850 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,850 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,850 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,850 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,852 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,853 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,853 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 02:19:34] 2025-12-03 01:18:58,853 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,853 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 02:19:34] 2025-12-03 01:18:58,853 | INFO     | job 6901272082 has completed (purged errors)
[2025-12-03 02:19:34] 2025-12-03 01:18:58,854 | INFO     | overall cleanup function is called
[2025-12-03 02:19:34] 2025-12-03 01:18:59,265 | INFO     | PID=1693582 has CPU usage=15.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-03 02:19:34] 2025-12-03 01:18:59,265 | INFO     | .. there are 2 such processes running
[2025-12-03 02:19:34] 2025-12-03 01:18:59,877 | INFO     | --- collectZombieJob: --- 10, [1701748]
[2025-12-03 02:19:34] 2025-12-03 01:18:59,877 | INFO     | zombie collector waiting for pid 1701748
[2025-12-03 02:19:34] 2025-12-03 01:18:59,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 02:19:34] 2025-12-03 01:18:59,877 | INFO     | collected zombie processes
[2025-12-03 02:19:34] 2025-12-03 01:18:59,878 | INFO     | will attempt to kill all subprocesses of pid=1701748
[2025-12-03 02:19:34] 2025-12-03 01:19:00,061 | INFO     | process IDs to be killed: [1701748] (in reverse order)
[2025-12-03 02:19:34] 2025-12-03 01:19:00,123 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 02:19:34] 2025-12-03 01:19:00,123 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 02:19:34] 2025-12-03 01:19:00,131 | INFO     | did not find any defunct processes belonging to 1701748
[2025-12-03 02:19:34] 2025-12-03 01:19:00,137 | INFO     | did not find any defunct processes belonging to 1701748
[2025-12-03 02:19:34] 2025-12-03 01:19:00,139 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 02:19:34] 2025-12-03 01:19:00,139 | INFO     | ready for new job
[2025-12-03 02:19:34] 2025-12-03 01:19:00,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 02:19:34] 2025-12-03 01:19:00,141 | INFO     | ***************************************
[2025-12-03 02:19:34] 2025-12-03 01:19:00,142 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 02:19:34] 2025-12-03 01:19:00,142 | INFO     | ***************************************
[2025-12-03 02:19:34] 2025-12-03 01:19:00,142 | INFO     | 
[2025-12-03 02:19:34] 2025-12-03 01:19:00,143 | INFO     | architecture information:
[2025-12-03 02:19:34] 2025-12-03 01:19:00,144 | INFO     | executing command: cat /etc/os-release
[2025-12-03 02:19:34] 2025-12-03 01:19:00,156 | INFO     | cat /etc/os-release:
[2025-12-03 02:19:34] NAME="CentOS Linux"
[2025-12-03 02:19:34] VERSION="7 (Core)"
[2025-12-03 02:19:34] ID="centos"
[2025-12-03 02:19:34] ID_LIKE="rhel fedora"
[2025-12-03 02:19:34] VERSION_ID="7"
[2025-12-03 02:19:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 02:19:34] ANSI_COLOR="0;31"
[2025-12-03 02:19:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 02:19:34] HOME_URL="https://www.centos.org/"
[2025-12-03 02:19:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 02:19:34] 
[2025-12-03 02:19:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 02:19:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 02:19:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 02:19:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 02:19:34] 
[2025-12-03 02:19:34] 2025-12-03 01:19:00,157 | INFO     | ***************************************
[2025-12-03 02:19:34] 2025-12-03 01:19:00,660 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-12-03 02:19:34] 2025-12-03 01:19:00,679 | INFO     | sufficient remaining disk space (866313568256 B)
[2025-12-03 02:19:34] 2025-12-03 01:19:00,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 02:19:34] 2025-12-03 01:19:00,679 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 02:19:34] 2025-12-03 01:19:00,679 | INFO     | update_server=False
[2025-12-03 02:19:34] 2025-12-03 01:19:00,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 02:19:34] 2025-12-03 01:19:00,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 02:19:34] 2025-12-03 01:19:00,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 02:19:34] 2025-12-03 01:19:00,714 | INFO     | all payload control threads have been joined
[2025-12-03 02:19:34] 2025-12-03 01:19:00,915 | INFO     | all job control threads have been joined
[2025-12-03 02:19:34] 2025-12-03 01:19:01,211 | INFO     | all data control threads have been joined
[2025-12-03 02:19:34] 2025-12-03 01:19:01,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 02:19:34] 2025-12-03 01:19:01,573 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 02:19:34] 2025-12-03 01:19:01,573 | INFO     | aborting loop
[2025-12-03 02:19:34] 2025-12-03 01:19:01,683 | INFO     | [job] queue monitor thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:01,685 | INFO     | [job] retrieve thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:01,719 | INFO     | [payload] control thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:01,886 | INFO     | [payload] failed_post thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:01,894 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:01,908 | INFO     | [data] copytool_in thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:01,920 | INFO     | [job] control thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:01,961 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:02,214 | INFO     | [job] validate thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:02,216 | INFO     | [data] control thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:02,286 | INFO     | [payload] validate_post thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:02,489 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:02,578 | INFO     | [job] job monitor thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:02,776 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:03,565 | INFO     | [data] copytool_out thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:04,686 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 02:19:34] 2025-12-03 01:19:27,472 | INFO     | [monitor] cgroup control has ended
[2025-12-03 02:19:34] 2025-12-03 01:19:29,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140204073453376)>', '<ExcThread(monitor, started 140203528267520)>']
[2025-12-03 02:19:34] 2025-12-03 01:19:31,587 | INFO     | PID=1693582 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 02:19:34] 2025-12-03 01:19:31,588 | INFO     | .. there are 2 such processes running
[2025-12-03 02:19:34] 2025-12-03 01:19:31,588 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 02:19:34] 2025-12-03 01:19:31,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 02:19:34] 2025-12-03 01:19:31,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 02:19:34] 2025-12-03 01:19:31,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 02:19:34] 2025-12-03 01:19:31,589 | INFO     | [monitor] control thread has ended
[2025-12-03 02:19:34] 2025-12-03 01:19:34,435 | INFO     | all workflow threads have been joined
[2025-12-03 02:19:34] 2025-12-03 01:19:34,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 02:19:34] 2025-12-03 01:19:34,435 | INFO     | traces error code: 0
[2025-12-03 02:19:34] 2025-12-03 01:19:34,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 02:19:34] 2025-12-03 01:19:34,546 [wrapper] ==== pilot stdout END ====
[2025-12-03 02:19:34] 2025-12-03 01:19:34,550 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 02:19:34] 2025-12-03 01:19:34,553 [wrapper] pilotpid: 1693582
[2025-12-03 02:19:34] 2025-12-03 01:19:34,556 [wrapper] Pilot exit status: 0
[2025-12-03 02:19:34] 2025-12-03 01:19:34,565 [wrapper] pandaids: 6901272082
[2025-12-03 02:19:34] 2025-12-03 01:19:34,604 [wrapper] cleanup supervisor_pilot 1928647 1693583
[2025-12-03 02:19:34] 2025-12-03 01:19:34,607 [wrapper] Test setup, not cleaning
[2025-12-03 02:19:34] 2025-12-03 01:19:34,610 [wrapper] apfmon messages muted
[2025-12-03 02:19:34] 2025-12-03 01:19:34,612 [wrapper] ==== wrapper stdout END ====
[2025-12-03 02:19:34] 2025-12-03 01:19:34,615 [wrapper] ==== wrapper stderr END ====
[2025-12-03 02:19:34]  *** Error codes and diagnostics ***
[2025-12-03 02:19:34]     "exeErrorCode": 0,
[2025-12-03 02:19:34]     "exeErrorDiag": "",
[2025-12-03 02:19:34]     "pilotErrorCode": 0,
[2025-12-03 02:19:34]     "pilotErrorDiag": "",
[2025-12-03 02:19:34]  *** Listing of results directory ***
[2025-12-03 02:19:34] total 1075144
[2025-12-03 02:19:34] -rw-r--r--. 1 boinc boinc    576529 Nov 29 10:19 pilot3.tar.gz
[2025-12-03 02:19:34] -rwx------. 1 boinc boinc     36292 Nov 29 10:19 runpilot2-wrapper.sh
[2025-12-03 02:19:34] -rw-r--r--. 1 boinc boinc      5112 Nov 29 10:20 queuedata.json
[2025-12-03 02:19:34] -rw-r--r--. 1 boinc boinc       100 Dec  2 16:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 02:19:34] -rwxr-xr-x. 1 boinc boinc      7986 Dec  2 16:00 run_atlas
[2025-12-03 02:19:34] -rw-r--r--. 1 boinc boinc       105 Dec  2 16:00 job.xml
[2025-12-03 02:19:34] -rw-r--r--. 1 boinc boinc      6293 Dec  2 16:00 init_data.xml
[2025-12-03 02:19:34] -rw-r--r--. 2 boinc boinc 378094304 Dec  2 16:00 EVNT.47531050._000597.pool.root.1
[2025-12-03 02:19:34] -rw-r--r--. 2 boinc boinc     15847 Dec  2 16:00 start_atlas.sh
[2025-12-03 02:19:34] drwxrwx--x. 2 boinc boinc        68 Dec  2 16:00 shared
[2025-12-03 02:19:34] -rw-r--r--. 2 boinc boinc    590121 Dec  2 16:00 input.tar.gz
[2025-12-03 02:19:34] -rw-r--r--. 1 boinc boinc         0 Dec  2 16:00 boinc_lockfile
[2025-12-03 02:19:34] -rw-r--r--. 1 boinc boinc      2877 Dec  2 16:00 pandaJob.out
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc    986791 Dec  2 16:00 agis_schedconf.cvmfs.json
[2025-12-03 02:19:34] drwx------. 5 boinc boinc      4096 Dec  2 16:00 pilot3
[2025-12-03 02:19:34] -rw-r--r--. 1 boinc boinc       533 Dec  3 02:07 boinc_task_state.xml
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc 703701996 Dec  3 02:18 HITS.47531058._002121.pool.root.1
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc      1036 Dec  3 02:18 memory_monitor_summary.json
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc   1516240 Dec  3 02:18 agis_ddmendpoints.agis.ALL.json
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc   2441998 Dec  3 02:18 log.47531058._002121.job.log.tgz.1
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc        95 Dec  3 02:18 pilot_heartbeat.json
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc     27740 Dec  3 02:18 heartbeat.json
[2025-12-03 02:19:34] -rw-r--r--. 1 boinc boinc      8192 Dec  3 02:19 boinc_mmap_file
[2025-12-03 02:19:34] -rw-r--r--. 1 boinc boinc        29 Dec  3 02:19 wrapper_checkpoint.txt
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc      4824 Dec  3 02:19 pilotlog.txt
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc   5164440 Dec  3 02:19 log.47531058._002121.job.log.1
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc       353 Dec  3 02:19 output.list
[2025-12-03 02:19:34] -rw-r--r--. 1 boinc boinc       620 Dec  3 02:19 runtime_log
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc   7649280 Dec  3 02:19 result.tar.gz
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc       665 Dec  3 02:19 u0VLDmAIWj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm21OKDmSY4LEn.diag
[2025-12-03 02:19:34] -rw-r--r--. 1 boinc boinc      8842 Dec  3 02:19 runtime_log.err
[2025-12-03 02:19:34] -rw-r--r--. 1 boinc boinc     21520 Dec  3 02:19 stderr.txt
[2025-12-03 02:19:34] HITS file was successfully produced:
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc 703701996 Dec  3 02:18 shared/HITS.pool.root.1
[2025-12-03 02:19:34]  *** Contents of shared directory: ***
[2025-12-03 02:19:34] total 1064516
[2025-12-03 02:19:34] -rw-r--r--. 2 boinc boinc 378094304 Dec  2 16:00 ATLAS.root_0
[2025-12-03 02:19:34] -rw-r--r--. 2 boinc boinc     15847 Dec  2 16:00 start_atlas.sh
[2025-12-03 02:19:34] -rw-r--r--. 2 boinc boinc    590121 Dec  2 16:00 input.tar.gz
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc 703701996 Dec  3 02:18 HITS.pool.root.1
[2025-12-03 02:19:34] -rw-------. 1 boinc boinc   7649280 Dec  3 02:19 result.tar.gz
02:19:36 (1689763): run_atlas exited; CPU time 426334.974696
02:19:36 (1689763): called boinc_finish(0)

</stderr_txt>
]]>

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