Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:35:40 (40158): wrapper (7.7.26015): starting
16:35:40 (40158): wrapper: running run_atlas (--nthreads 3)
[2025-12-08 16:35:40] Arguments: --nthreads 3
[2025-12-08 16:35:40] Threads: 3
[2025-12-08 16:35:40] Checking for CVMFS
[2025-12-08 16:35:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-08 16:35:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-08 16:35:40] Running cvmfs_config stat atlas.cern.ch
[2025-12-08 16:35:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-08 16:35:40] 2.12.7.0 8569 10187 74312 153770 1 80 5317113 6144001 2359 130560 0 13051820 99.979 664279 2269 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-12-08 16:35:40] CVMFS is ok
[2025-12-08 16:35:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-08 16:35:40] Checking for apptainer binary...
[2025-12-08 16:35:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-08 16:35:40] Running /usr/bin/apptainer --version
[2025-12-08 16:35:41] apptainer version 1.4.2
[2025-12-08 16:35:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-08 16:35:41] Ryzen3
[2025-12-08 16:35:41] apptainer works
[2025-12-08 16:35:41] Set ATHENA_PROC_NUMBER=3
[2025-12-08 16:35:41] Set ATHENA_CORE_NUMBER=3
[2025-12-08 16:35:41] Starting ATLAS job with PandaID=6900972944
[2025-12-08 16:35:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-09 05:19:14]  *** The last 200 lines of the pilot log: ***
[2025-12-09 05:19:14] 2025-12-09 04:18:16,685 | INFO     | time since job start (45743s) is within the limit (172800.0s)
[2025-12-09 05:19:14] 2025-12-09 04:18:17,237 | INFO     | monitor loop #3414: job 0:6900972944 is in state 'finished'
[2025-12-09 05:19:14] 2025-12-09 04:18:17,237 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-09 05:19:14] 2025-12-09 04:18:18,284 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-09 05:19:14] 2025-12-09 04:18:18,286 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3967.1770833333335
[2025-12-09 05:19:14] 2025-12-09 04:18:18,288 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6900972944/memory_monitor_summary.json (trf name=prmon)
[2025-12-09 05:19:14] 2025-12-09 04:18:18,288 | INFO     | extracted standard info from prmon json
[2025-12-09 05:19:14] 2025-12-09 04:18:18,288 | INFO     | extracted standard memory fields from prmon json
[2025-12-09 05:19:14] 2025-12-09 04:18:18,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-09 05:19:14] 2025-12-09 04:18:18,297 | INFO     | fitting pss+swap vs Time
[2025-12-09 05:19:14] 2025-12-09 04:18:18,298 | INFO     | sum of square deviations: 130816173687.5
[2025-12-09 05:19:14] 2025-12-09 04:18:18,306 | INFO     | sum of deviations: 488861810226.5
[2025-12-09 05:19:14] 2025-12-09 04:18:18,306 | INFO     | mean x: 1765231023.5
[2025-12-09 05:19:14] 2025-12-09 04:18:18,307 | INFO     | mean y: 2563363.966666667
[2025-12-09 05:19:14] 2025-12-09 04:18:18,307 | INFO     | intersect: -6594128843.815329
[2025-12-09 05:19:14] 2025-12-09 04:18:18,307 | INFO     | chi2: 3.319057315887989
[2025-12-09 05:19:14] 2025-12-09 04:18:18,308 | INFO     | sum of square deviations: 128217250540.0
[2025-12-09 05:19:14] 2025-12-09 04:18:18,317 | INFO     | sum of deviations: 634067999631.0001
[2025-12-09 05:19:14] 2025-12-09 04:18:18,318 | INFO     | mean x: 1765230871.0
[2025-12-09 05:19:14] 2025-12-09 04:18:18,318 | INFO     | mean y: 2571871.132885906
[2025-12-09 05:19:14] 2025-12-09 04:18:18,318 | INFO     | intersect: -8726958691.626116
[2025-12-09 05:19:14] 2025-12-09 04:18:18,318 | INFO     | chi2: 1.632784105825102
[2025-12-09 05:19:14] 2025-12-09 04:18:18,318 | INFO     | current chi2=1.632784105825102 (change=50.80578759489537 %)
[2025-12-09 05:19:14] 2025-12-09 04:18:18,319 | INFO     | sum of square deviations: 125652979205.0
[2025-12-09 05:19:14] 2025-12-09 04:18:18,327 | INFO     | sum of deviations: 626850136872.0001
[2025-12-09 05:19:14] 2025-12-09 04:18:18,328 | INFO     | mean x: 1765230718.5
[2025-12-09 05:19:14] 2025-12-09 04:18:18,328 | INFO     | mean y: 2571441.8351351353
[2025-12-09 05:19:14] 2025-12-09 04:18:18,328 | INFO     | intersect: -8803706964.800152
[2025-12-09 05:19:14] 2025-12-09 04:18:18,328 | INFO     | chi2: 1.631731870910439
[2025-12-09 05:19:14] 2025-12-09 04:18:18,328 | INFO     | current chi2=1.631731870910439 (change=0.06444421591986148 %)
[2025-12-09 05:19:14] 2025-12-09 04:18:18,328 | INFO     | right removable region: 739
[2025-12-09 05:19:14] 2025-12-09 04:18:18,329 | INFO     | sum of square deviations: 128217250540.0
[2025-12-09 05:19:14] 2025-12-09 04:18:18,338 | INFO     | sum of deviations: 363635837761.9998
[2025-12-09 05:19:14] 2025-12-09 04:18:18,338 | INFO     | mean x: 1765231176.0
[2025-12-09 05:19:14] 2025-12-09 04:18:18,338 | INFO     | mean y: 2570689.322147651
[2025-12-09 05:19:14] 2025-12-09 04:18:18,338 | INFO     | intersect: -5003786215.266957
[2025-12-09 05:19:14] 2025-12-09 04:18:18,339 | INFO     | chi2: 1.783457851620022
[2025-12-09 05:19:14] 2025-12-09 04:18:18,339 | INFO     | current chi2=1.783457851620022 (change=46.26613276357745 %)
[2025-12-09 05:19:14] 2025-12-09 04:18:18,339 | INFO     | sum of square deviations: 125652979205.0
[2025-12-09 05:19:14] 2025-12-09 04:18:18,348 | INFO     | sum of deviations: 351436250579.5001
[2025-12-09 05:19:14] 2025-12-09 04:18:18,348 | INFO     | mean x: 1765231328.5
[2025-12-09 05:19:14] 2025-12-09 04:18:18,348 | INFO     | mean y: 2571414.733783784
[2025-12-09 05:19:14] 2025-12-09 04:18:18,348 | INFO     | intersect: -4934568026.117804
[2025-12-09 05:19:14] 2025-12-09 04:18:18,349 | INFO     | chi2: 1.7826743975700812
[2025-12-09 05:19:14] 2025-12-09 04:18:18,349 | INFO     | current chi2=1.7826743975700812 (change=0.04392893553548667 %)
[2025-12-09 05:19:14] 2025-12-09 04:18:18,349 | INFO     | left removable region: 20
[2025-12-09 05:19:14] 2025-12-09 04:18:18,350 | INFO     | sum of square deviations: 115256188920.0
[2025-12-09 05:19:14] 2025-12-09 04:18:18,358 | INFO     | sum of deviations: 467668485645.9999
[2025-12-09 05:19:14] 2025-12-09 04:18:18,358 | INFO     | mean x: 1765231298.0
[2025-12-09 05:19:14] 2025-12-09 04:18:18,358 | INFO     | mean y: 2580912.271210014
[2025-12-09 05:19:14] 2025-12-09 04:18:18,358 | INFO     | intersect: -7160097774.975659
[2025-12-09 05:19:14] 2025-12-09 04:18:18,359 | INFO     | chi2: 0.08542898146443735
[2025-12-09 05:19:14] 2025-12-09 04:18:18,359 | INFO     | current memory leak: 4.06 B/s (using 719 data points, chi2=0.09)
[2025-12-09 05:19:14] 2025-12-09 04:18:18,359 | INFO     | could have reported an average CPU frequency of 3944 MHz (29 samples)
[2025-12-09 05:19:14] 2025-12-09 04:18:18,359 | INFO     | ..............................
[2025-12-09 05:19:14] 2025-12-09 04:18:18,359 | INFO     | . Timing measurements:
[2025-12-09 05:19:14] 2025-12-09 04:18:18,359 | INFO     | . get job = 0 s
[2025-12-09 05:19:14] 2025-12-09 04:18:18,360 | INFO     | . initial setup = 3 s
[2025-12-09 05:19:14] 2025-12-09 04:18:18,360 | INFO     | . payload setup = 7 s
[2025-12-09 05:19:14] 2025-12-09 04:18:18,360 | INFO     | . stage-in = 0 s
[2025-12-09 05:19:14] 2025-12-09 04:18:18,360 | INFO     | . payload execution = 45713 s
[2025-12-09 05:19:14] 2025-12-09 04:18:18,360 | INFO     | . stage-out = 1 s
[2025-12-09 05:19:14] 2025-12-09 04:18:18,360 | INFO     | . log creation = 1 s
[2025-12-09 05:19:14] 2025-12-09 04:18:18,360 | INFO     | ..............................
[2025-12-09 05:19:14] 2025-12-09 04:18:18,687 | INFO     | time since job start (45745s) is within the limit (172800.0s)
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | 
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | job summary report
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | --------------------------------------------------
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | PanDA job id: 6900972944
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | task id: 47531058
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | errors: (none)
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | pilot state: finished 
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | transexitcode: 0
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | exeerrorcode: 0
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | exeerrordiag: 
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | exitcode: 0
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | exitmsg: OK
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | cpuconsumptiontime: 134662 s
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | nevents: 1000
[2025-12-09 05:19:14] 2025-12-09 04:18:18,921 | INFO     | neventsw: 0
[2025-12-09 05:19:14] 2025-12-09 04:18:18,922 | INFO     | pid: 50998
[2025-12-09 05:19:14] 2025-12-09 04:18:18,922 | INFO     | pgrp: 50998
[2025-12-09 05:19:14] 2025-12-09 04:18:18,922 | INFO     | corecount: 3
[2025-12-09 05:19:14] 2025-12-09 04:18:18,922 | INFO     | event service: False
[2025-12-09 05:19:14] 2025-12-09 04:18:18,922 | INFO     | sizes: {0: 2284455, 1: 2284455, 3: 2284745, 11: 2284773, 45724: 2350804, 45726: 2359984, 45731: 2360174}
[2025-12-09 05:19:14] 2025-12-09 04:18:18,922 | INFO     | --------------------------------------------------
[2025-12-09 05:19:14] 2025-12-09 04:18:18,922 | INFO     | 
[2025-12-09 05:19:14] 2025-12-09 04:18:18,922 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-12-09 05:19:14] 2025-12-09 04:18:18,937 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,937 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,937 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,938 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,938 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-09 05:19:14] 2025-12-09 04:18:18,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-09 05:19:14] 2025-12-09 04:18:18,938 | INFO     | job 6900972944 has completed (purged errors)
[2025-12-09 05:19:14] 2025-12-09 04:18:18,938 | INFO     | overall cleanup function is called
[2025-12-09 05:19:14] 2025-12-09 04:18:19,974 | INFO     | --- collectZombieJob: --- 10, [50998]
[2025-12-09 05:19:14] 2025-12-09 04:18:19,974 | INFO     | zombie collector waiting for pid 50998
[2025-12-09 05:19:14] 2025-12-09 04:18:19,974 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-09 05:19:14] 2025-12-09 04:18:19,974 | INFO     | collected zombie processes
[2025-12-09 05:19:14] 2025-12-09 04:18:19,974 | INFO     | will attempt to kill all subprocesses of pid=50998
[2025-12-09 05:19:14] 2025-12-09 04:18:20,054 | INFO     | process IDs to be killed: [50998] (in reverse order)
[2025-12-09 05:19:14] 2025-12-09 04:18:20,091 | WARNING  | found no corresponding commands to process id(s)
[2025-12-09 05:19:14] 2025-12-09 04:18:20,091 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-09 05:19:14] 2025-12-09 04:18:20,094 | INFO     | did not find any defunct processes belonging to 50998
[2025-12-09 05:19:14] 2025-12-09 04:18:20,096 | INFO     | did not find any defunct processes belonging to 50998
[2025-12-09 05:19:14] 2025-12-09 04:18:20,101 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-09 05:19:14] 2025-12-09 04:18:20,101 | INFO     | ready for new job
[2025-12-09 05:19:14] 2025-12-09 04:18:20,101 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-09 05:19:14] 2025-12-09 04:18:20,103 | INFO     | ***************************************
[2025-12-09 05:19:14] 2025-12-09 04:18:20,103 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-09 05:19:14] 2025-12-09 04:18:20,103 | INFO     | ***************************************
[2025-12-09 05:19:14] 2025-12-09 04:18:20,103 | INFO     | 
[2025-12-09 05:19:14] 2025-12-09 04:18:20,104 | INFO     | architecture information:
[2025-12-09 05:19:14] 2025-12-09 04:18:20,104 | INFO     | executing command: cat /etc/os-release
[2025-12-09 05:19:14] 2025-12-09 04:18:20,116 | INFO     | cat /etc/os-release:
[2025-12-09 05:19:14] NAME="CentOS Linux"
[2025-12-09 05:19:14] VERSION="7 (Core)"
[2025-12-09 05:19:14] ID="centos"
[2025-12-09 05:19:14] ID_LIKE="rhel fedora"
[2025-12-09 05:19:14] VERSION_ID="7"
[2025-12-09 05:19:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-09 05:19:14] ANSI_COLOR="0;31"
[2025-12-09 05:19:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-09 05:19:14] HOME_URL="https://www.centos.org/"
[2025-12-09 05:19:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-09 05:19:14] 
[2025-12-09 05:19:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-09 05:19:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-09 05:19:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-09 05:19:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-09 05:19:14] 
[2025-12-09 05:19:14] 2025-12-09 04:18:20,116 | INFO     | ***************************************
[2025-12-09 05:19:14] 2025-12-09 04:18:20,619 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-12-09 05:19:14] 2025-12-09 04:18:20,631 | INFO     | sufficient remaining disk space (231663992832 B)
[2025-12-09 05:19:14] 2025-12-09 04:18:20,631 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-09 05:19:14] 2025-12-09 04:18:20,631 | INFO     | current server update state: UPDATING_FINAL
[2025-12-09 05:19:14] 2025-12-09 04:18:20,631 | INFO     | update_server=False
[2025-12-09 05:19:14] 2025-12-09 04:18:20,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-09 05:19:14] 2025-12-09 04:18:20,632 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-09 05:19:14] 2025-12-09 04:18:20,632 | INFO     | found 0 job(s) in 20 queues
[2025-12-09 05:19:14] 2025-12-09 04:18:20,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-09 05:19:14] 2025-12-09 04:18:20,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-09 05:19:14] 2025-12-09 04:18:20,717 | INFO     | all data control threads have been joined
[2025-12-09 05:19:14] 2025-12-09 04:18:20,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-09 05:19:14] 2025-12-09 04:18:20,744 | INFO     | aborting loop
[2025-12-09 05:19:14] 2025-12-09 04:18:21,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-09 05:19:14] 2025-12-09 04:18:21,536 | INFO     | all job control threads have been joined
[2025-12-09 05:19:14] 2025-12-09 04:18:21,634 | INFO     | [job] retrieve thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:21,676 | INFO     | all payload control threads have been joined
[2025-12-09 05:19:14] 2025-12-09 04:18:21,720 | INFO     | [data] control thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:21,747 | INFO     | [job] job monitor thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:21,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:21,970 | INFO     | [payload] validate_post thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:22,540 | INFO     | [job] control thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:22,664 | INFO     | [payload] failed_post thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:22,681 | INFO     | [payload] control thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:22,812 | INFO     | [payload] execute_payloads thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:23,040 | INFO     | [job] validate thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:23,070 | INFO     | [job] create_data_payload thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:23,080 | INFO     | [payload] validate_pre thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:23,114 | INFO     | [data] copytool_in thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:23,347 | INFO     | [data] copytool_out thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:23,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-09 05:19:14] 2025-12-09 04:18:23,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-09 05:19:14] 2025-12-09 04:18:24,434 | INFO     | [job] queue monitor thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:18:27,901 | INFO     | [data] queue_monitor thread has finished
[2025-12-09 05:19:14] 2025-12-09 04:19:08,824 | INFO     | [monitor] cgroup control has ended
[2025-12-09 05:19:14] 2025-12-09 04:19:09,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140250449176384)>', '<ExcThread(monitor, started 140249732736768)>']
[2025-12-09 05:19:14] 2025-12-09 04:19:09,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-09 05:19:14] 2025-12-09 04:19:09,821 | INFO     | [monitor] control thread has ended
[2025-12-09 05:19:14] 2025-12-09 04:19:14,164 | INFO     | all workflow threads have been joined
[2025-12-09 05:19:14] 2025-12-09 04:19:14,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-09 05:19:14] 2025-12-09 04:19:14,164 | INFO     | traces error code: 0
[2025-12-09 05:19:14] 2025-12-09 04:19:14,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-09 05:19:14] 2025-12-09 04:19:14,245 [wrapper] ==== pilot stdout END ====
[2025-12-09 05:19:14] 2025-12-09 04:19:14,247 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-09 05:19:14] 2025-12-09 04:19:14,248 [wrapper] pilotpid: 43881
[2025-12-09 05:19:14] 2025-12-09 04:19:14,250 [wrapper] Pilot exit status: 0
[2025-12-09 05:19:14] 2025-12-09 04:19:14,269 [wrapper] pandaids: 6900972944
[2025-12-09 05:19:14] 2025-12-09 04:19:14,293 [wrapper] cleanup supervisor_pilot  386302 43882
[2025-12-09 05:19:14] 2025-12-09 04:19:14,295 [wrapper] Test setup, not cleaning
[2025-12-09 05:19:14] 2025-12-09 04:19:14,297 [wrapper] apfmon messages muted
[2025-12-09 05:19:14] 2025-12-09 04:19:14,299 [wrapper] ==== wrapper stdout END ====
[2025-12-09 05:19:14] 2025-12-09 04:19:14,300 [wrapper] ==== wrapper stderr END ====
[2025-12-09 05:19:14]  *** Error codes and diagnostics ***
[2025-12-09 05:19:14]     "exeErrorCode": 0,
[2025-12-09 05:19:14]     "exeErrorDiag": "",
[2025-12-09 05:19:14]     "pilotErrorCode": 0,
[2025-12-09 05:19:14]     "pilotErrorDiag": "",
[2025-12-09 05:19:14]  *** Listing of results directory ***
[2025-12-09 05:19:14] insgesamt 1052344
[2025-12-09 05:19:14] -rw-r--r-- 1 boinc boinc    576529 29. Nov 10:19 pilot3.tar.gz
[2025-12-09 05:19:14] -rwx------ 1 boinc boinc     36292 29. Nov 10:19 runpilot2-wrapper.sh
[2025-12-09 05:19:14] -rw-r--r-- 1 boinc boinc      5112 29. Nov 10:19 queuedata.json
[2025-12-09 05:19:14] -rw-r--r-- 1 boinc boinc       100  8. Dez 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-09 05:19:14] -rwxr-xr-x 1 boinc boinc      7986  8. Dez 16:35 run_atlas
[2025-12-09 05:19:14] -rw-r--r-- 1 boinc boinc       105  8. Dez 16:35 job.xml
[2025-12-09 05:19:14] -rw-r--r-- 2 boinc boinc 374892250  8. Dez 16:35 EVNT.47531050._000520.pool.root.1
[2025-12-09 05:19:14] drwxrwx--x 2 boinc boinc      4096  8. Dez 16:35 shared
[2025-12-09 05:19:14] -rw-r--r-- 2 boinc boinc    590118  8. Dez 16:35 input.tar.gz
[2025-12-09 05:19:14] -rw-r--r-- 2 boinc boinc     15847  8. Dez 16:35 start_atlas.sh
[2025-12-09 05:19:14] -rw-r--r-- 1 boinc boinc         0  8. Dez 16:35 boinc_lockfile
[2025-12-09 05:19:14] -rw-r--r-- 1 boinc boinc      2881  8. Dez 16:35 pandaJob.out
[2025-12-09 05:19:14] -rw------- 1 boinc boinc        52  8. Dez 16:35 setup.sh.local
[2025-12-09 05:19:14] -rw------- 1 boinc boinc    985713  8. Dez 16:35 agis_schedconf.cvmfs.json
[2025-12-09 05:19:14] drwx------ 5 boinc boinc      4096  8. Dez 16:35 pilot3
[2025-12-09 05:19:14] -rw-r--r-- 1 boinc boinc      6927  9. Dez 01:19 init_data.xml
[2025-12-09 05:19:14] -rw-r--r-- 1 boinc boinc       532  9. Dez 05:13 boinc_task_state.xml
[2025-12-09 05:19:14] -rw------- 1 boinc boinc 682837525  9. Dez 05:17 HITS.47531058._001355.pool.root.1
[2025-12-09 05:19:14] -rw------- 1 boinc boinc        95  9. Dez 05:18 pilot_heartbeat.json
[2025-12-09 05:19:14] -rw------- 1 boinc boinc      1035  9. Dez 05:18 memory_monitor_summary.json
[2025-12-09 05:19:14] -rw------- 1 boinc boinc   1516240  9. Dez 05:18 agis_ddmendpoints.agis.ALL.json
[2025-12-09 05:19:14] -rw------- 1 boinc boinc   1465211  9. Dez 05:18 log.47531058._001355.job.log.tgz.1
[2025-12-09 05:19:14] -rw------- 1 boinc boinc     28324  9. Dez 05:18 heartbeat.json
[2025-12-09 05:19:14] -rw-r--r-- 1 boinc boinc        29  9. Dez 05:19 wrapper_checkpoint.txt
[2025-12-09 05:19:14] -rw-r--r-- 1 boinc boinc      8192  9. Dez 05:19 boinc_mmap_file
[2025-12-09 05:19:14] -rw------- 1 boinc boinc      4554  9. Dez 05:19 pilotlog.txt
[2025-12-09 05:19:14] -rw------- 1 boinc boinc   6492463  9. Dez 05:19 log.47531058._001355.job.log.1
[2025-12-09 05:19:14] -rw------- 1 boinc boinc       353  9. Dez 05:19 output.list
[2025-12-09 05:19:14] -rw-r--r-- 1 boinc boinc       620  9. Dez 05:19 runtime_log
[2025-12-09 05:19:14] -rw------- 1 boinc boinc   7997440  9. Dez 05:19 result.tar.gz
[2025-12-09 05:19:14] -rw-r--r-- 1 boinc boinc      9291  9. Dez 05:19 runtime_log.err
[2025-12-09 05:19:14] -rw------- 1 boinc boinc       658  9. Dez 05:19 7nWMDmmHWj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIxOKDmFIWoYm.diag
[2025-12-09 05:19:14] -rw-r--r-- 1 boinc boinc     20853  9. Dez 05:19 stderr.txt
[2025-12-09 05:19:14] HITS file was successfully produced:
[2025-12-09 05:19:14] -rw------- 1 boinc boinc 682837525  9. Dez 05:17 shared/HITS.pool.root.1
[2025-12-09 05:19:14]  *** Contents of shared directory: ***
[2025-12-09 05:19:14] insgesamt 1041360
[2025-12-09 05:19:14] -rw-r--r-- 2 boinc boinc 374892250  8. Dez 16:35 ATLAS.root_0
[2025-12-09 05:19:14] -rw-r--r-- 2 boinc boinc    590118  8. Dez 16:35 input.tar.gz
[2025-12-09 05:19:14] -rw-r--r-- 2 boinc boinc     15847  8. Dez 16:35 start_atlas.sh
[2025-12-09 05:19:14] -rw------- 1 boinc boinc 682837525  9. Dez 05:17 HITS.pool.root.1
[2025-12-09 05:19:14] -rw------- 1 boinc boinc   7997440  9. Dez 05:19 result.tar.gz
05:19:16 (40158): run_atlas exited; CPU time 134757.400391
05:19:16 (40158): called boinc_finish(0)

</stderr_txt>
]]>

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