Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:22:48 (2298926): wrapper (7.7.26015): starting
06:22:48 (2298926): wrapper: running run_atlas (--nthreads 9)
[2025-12-02 06:22:48] Arguments: --nthreads 9
[2025-12-02 06:22:48] Threads: 9
[2025-12-02 06:22:48] Checking for CVMFS
[2025-12-02 06:22:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 06:22:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 06:22:48] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 06:22:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 06:22:48] 2.13.3.0 4548 2306 88388 153554 3 57 6140916 37030912 1888 16776704 0 2712109 99.726 769264 47980 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 06:22:48] CVMFS is ok
[2025-12-02 06:22:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 06:22:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 06:22:48] Further information can be found at the LHC@home message board.
[2025-12-02 06:22:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 06:22:48] Checking for apptainer binary...
[2025-12-02 06:22:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 06:22:48] Running /usr/bin/apptainer --version
[2025-12-02 06:22:48] apptainer version 1.4.4-1.el9
[2025-12-02 06:22:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 06:22:49] c-205-36.aglt2.org
[2025-12-02 06:22:49] apptainer works
[2025-12-02 06:22:49] Set ATHENA_PROC_NUMBER=9
[2025-12-02 06:22:49] Set ATHENA_CORE_NUMBER=9
[2025-12-02 06:22:49] Starting ATLAS job with PandaID=6900761833
[2025-12-02 06:22:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 14:00:49]  *** The last 200 lines of the pilot log: ***
[2025-12-02 14:00:49] 2025-12-02 18:59:53,265 | INFO     | time since job start (27414s) is within the limit (172800.0s)
[2025-12-02 14:00:49] 2025-12-02 18:59:53,751 | INFO     | monitor loop #2041: job 0:6900761833 is in state 'finished'
[2025-12-02 14:00:49] 2025-12-02 18:59:53,751 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 14:00:49] 2025-12-02 18:59:54,397 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 14:00:49] 2025-12-02 18:59:54,403 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2712.6557187500002
[2025-12-02 14:00:49] 2025-12-02 18:59:54,409 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6900761833/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 14:00:49] 2025-12-02 18:59:54,410 | INFO     | extracted standard info from prmon json
[2025-12-02 14:00:49] 2025-12-02 18:59:54,410 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 14:00:49] 2025-12-02 18:59:54,410 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 14:00:49] 2025-12-02 18:59:54,419 | INFO     | fitting pss+swap vs Time
[2025-12-02 14:00:49] 2025-12-02 18:59:54,420 | INFO     | sum of square deviations: 28068187428.81958
[2025-12-02 14:00:49] 2025-12-02 18:59:54,426 | INFO     | sum of deviations: 357398031774.94226
[2025-12-02 14:00:49] 2025-12-02 18:59:54,426 | INFO     | mean x: 1764688271.0200446
[2025-12-02 14:00:49] 2025-12-02 18:59:54,426 | INFO     | mean y: 3638896.89532294
[2025-12-02 14:00:49] 2025-12-02 18:59:54,426 | INFO     | intersect: -22466501590.741215
[2025-12-02 14:00:49] 2025-12-02 18:59:54,427 | INFO     | chi2: 6.270399369907693
[2025-12-02 14:00:49] 2025-12-02 18:59:54,428 | INFO     | sum of square deviations: 27140898368.81755
[2025-12-02 14:00:49] 2025-12-02 18:59:54,434 | INFO     | sum of deviations: 542812903675.16895
[2025-12-02 14:00:49] 2025-12-02 18:59:54,434 | INFO     | mean x: 1764688118.5202703
[2025-12-02 14:00:49] 2025-12-02 18:59:54,434 | INFO     | mean y: 3669373.5923423423
[2025-12-02 14:00:49] 2025-12-02 18:59:54,434 | INFO     | intersect: -35289763757.40506
[2025-12-02 14:00:49] 2025-12-02 18:59:54,435 | INFO     | chi2: 3.1554324140957886
[2025-12-02 14:00:49] 2025-12-02 18:59:54,435 | INFO     | current chi2=3.1554324140957886 (change=49.677329497718425 %)
[2025-12-02 14:00:49] 2025-12-02 18:59:54,436 | INFO     | sum of square deviations: 26234260858.81531
[2025-12-02 14:00:49] 2025-12-02 18:59:54,441 | INFO     | sum of deviations: 604877188337.7694
[2025-12-02 14:00:49] 2025-12-02 18:59:54,441 | INFO     | mean x: 1764687966.0205011
[2025-12-02 14:00:49] 2025-12-02 18:59:54,441 | INFO     | mean y: 3679777.13667426
[2025-12-02 14:00:49] 2025-12-02 18:59:54,442 | INFO     | intersect: -40684316005.34411
[2025-12-02 14:00:49] 2025-12-02 18:59:54,442 | INFO     | chi2: 2.626273643603329
[2025-12-02 14:00:49] 2025-12-02 18:59:54,442 | INFO     | current chi2=2.626273643603329 (change=16.76977038483309 %)
[2025-12-02 14:00:49] 2025-12-02 18:59:54,443 | INFO     | right removable region: 438
[2025-12-02 14:00:49] 2025-12-02 18:59:54,443 | INFO     | sum of square deviations: 27140892878.81755
[2025-12-02 14:00:49] 2025-12-02 18:59:54,449 | INFO     | sum of deviations: 194442691728.392
[2025-12-02 14:00:49] 2025-12-02 18:59:54,449 | INFO     | mean x: 1764688423.5202703
[2025-12-02 14:00:49] 2025-12-02 18:59:54,449 | INFO     | mean y: 3665622.7342342343
[2025-12-02 14:00:49] 2025-12-02 18:59:54,449 | INFO     | intersect: -12638909132.019493
[2025-12-02 14:00:49] 2025-12-02 18:59:54,450 | INFO     | chi2: 3.7931419252725567
[2025-12-02 14:00:49] 2025-12-02 18:59:54,450 | INFO     | current chi2=3.7931419252725567 (change=39.507171688676735 %)
[2025-12-02 14:00:49] 2025-12-02 18:59:54,451 | INFO     | sum of square deviations: 26234249878.81531
[2025-12-02 14:00:49] 2025-12-02 18:59:54,456 | INFO     | sum of deviations: 162936276525.39194
[2025-12-02 14:00:49] 2025-12-02 18:59:54,457 | INFO     | mean x: 1764688576.0205011
[2025-12-02 14:00:49] 2025-12-02 18:59:54,457 | INFO     | mean y: 3670915.4009111617
[2025-12-02 14:00:49] 2025-12-02 18:59:54,457 | INFO     | intersect: -10956497076.132334
[2025-12-02 14:00:49] 2025-12-02 18:59:54,458 | INFO     | chi2: 3.750157021279291
[2025-12-02 14:00:49] 2025-12-02 18:59:54,458 | INFO     | current chi2=3.750157021279291 (change=1.1332268826238825 %)
[2025-12-02 14:00:49] 2025-12-02 18:59:54,458 | INFO     | left removable region: 20
[2025-12-02 14:00:49] 2025-12-02 18:59:54,458 | INFO     | sum of square deviations: 22646654224.346874
[2025-12-02 14:00:49] 2025-12-02 18:59:54,463 | INFO     | sum of deviations: 374009603804.16254
[2025-12-02 14:00:49] 2025-12-02 18:59:54,463 | INFO     | mean x: 1764688545.5191388
[2025-12-02 14:00:49] 2025-12-02 18:59:54,464 | INFO     | mean y: 3719219.2296650717
[2025-12-02 14:00:49] 2025-12-02 18:59:54,464 | INFO     | intersect: -29140120626.11913
[2025-12-02 14:00:49] 2025-12-02 18:59:54,464 | INFO     | chi2: 0.05175464751715848
[2025-12-02 14:00:49] 2025-12-02 18:59:54,465 | INFO     | current memory leak: 16.52 B/s (using 418 data points, chi2=0.05)
[2025-12-02 14:00:49] 2025-12-02 18:59:54,465 | INFO     | could have reported an average CPU frequency of 2623 MHz (19 samples)
[2025-12-02 14:00:49] 2025-12-02 18:59:54,465 | INFO     | ..............................
[2025-12-02 14:00:49] 2025-12-02 18:59:54,465 | INFO     | . Timing measurements:
[2025-12-02 14:00:49] 2025-12-02 18:59:54,466 | INFO     | . get job = 0 s
[2025-12-02 14:00:49] 2025-12-02 18:59:54,466 | INFO     | . initial setup = 2 s
[2025-12-02 14:00:49] 2025-12-02 18:59:54,466 | INFO     | . payload setup = 9 s
[2025-12-02 14:00:49] 2025-12-02 18:59:54,466 | INFO     | . stage-in = 0 s
[2025-12-02 14:00:49] 2025-12-02 18:59:54,466 | INFO     | . payload execution = 27376 s
[2025-12-02 14:00:49] 2025-12-02 18:59:54,466 | INFO     | . stage-out = 3 s
[2025-12-02 14:00:49] 2025-12-02 18:59:54,466 | INFO     | . log creation = 0 s
[2025-12-02 14:00:49] 2025-12-02 18:59:54,466 | INFO     | ..............................
[2025-12-02 14:00:49] 2025-12-02 18:59:54,588 | INFO     | 
[2025-12-02 14:00:49] 2025-12-02 18:59:54,589 | INFO     | job summary report
[2025-12-02 14:00:49] 2025-12-02 18:59:54,589 | INFO     | --------------------------------------------------
[2025-12-02 14:00:49] 2025-12-02 18:59:54,589 | INFO     | PanDA job id: 6900761833
[2025-12-02 14:00:49] 2025-12-02 18:59:54,589 | INFO     | task id: 47530783
[2025-12-02 14:00:49] 2025-12-02 18:59:54,589 | INFO     | errors: (none)
[2025-12-02 14:00:49] 2025-12-02 18:59:54,589 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 14:00:49] 2025-12-02 18:59:54,589 | INFO     | pilot state: finished 
[2025-12-02 14:00:49] 2025-12-02 18:59:54,589 | INFO     | transexitcode: 0
[2025-12-02 14:00:49] 2025-12-02 18:59:54,590 | INFO     | exeerrorcode: 0
[2025-12-02 14:00:49] 2025-12-02 18:59:54,590 | INFO     | exeerrordiag: 
[2025-12-02 14:00:49] 2025-12-02 18:59:54,590 | INFO     | exitcode: 0
[2025-12-02 14:00:49] 2025-12-02 18:59:54,590 | INFO     | exitmsg: OK
[2025-12-02 14:00:49] 2025-12-02 18:59:54,590 | INFO     | cpuconsumptiontime: 239771 s
[2025-12-02 14:00:49] 2025-12-02 18:59:54,590 | INFO     | nevents: 1000
[2025-12-02 14:00:49] 2025-12-02 18:59:54,590 | INFO     | neventsw: 0
[2025-12-02 14:00:49] 2025-12-02 18:59:54,590 | INFO     | pid: 2309669
[2025-12-02 14:00:49] 2025-12-02 18:59:54,591 | INFO     | pgrp: 2309669
[2025-12-02 14:00:49] 2025-12-02 18:59:54,591 | INFO     | corecount: 9
[2025-12-02 14:00:49] 2025-12-02 18:59:54,591 | INFO     | event service: False
[2025-12-02 14:00:49] 2025-12-02 18:59:54,591 | INFO     | sizes: {0: 2284272, 1: 2284471, 4: 2284733, 12: 2284761, 27388: 2341361, 27392: 2350355, 27395: 2350539, 27400: 2350785}
[2025-12-02 14:00:49] 2025-12-02 18:59:54,591 | INFO     | --------------------------------------------------
[2025-12-02 14:00:49] 2025-12-02 18:59:54,591 | INFO     | 
[2025-12-02 14:00:49] 2025-12-02 18:59:54,591 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-02 14:00:49] 2025-12-02 18:59:54,607 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,608 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,608 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,608 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,609 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,609 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,609 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,610 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,610 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,610 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 14:00:49] 2025-12-02 18:59:54,610 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,610 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 14:00:49] 2025-12-02 18:59:54,610 | INFO     | job 6900761833 has completed (purged errors)
[2025-12-02 14:00:49] 2025-12-02 18:59:54,611 | INFO     | overall cleanup function is called
[2025-12-02 14:00:49] 2025-12-02 18:59:55,623 | INFO     | --- collectZombieJob: --- 10, [2309669]
[2025-12-02 14:00:49] 2025-12-02 18:59:55,623 | INFO     | zombie collector waiting for pid 2309669
[2025-12-02 14:00:49] 2025-12-02 18:59:55,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 14:00:49] 2025-12-02 18:59:55,623 | INFO     | collected zombie processes
[2025-12-02 14:00:49] 2025-12-02 18:59:55,624 | INFO     | will attempt to kill all subprocesses of pid=2309669
[2025-12-02 14:00:49] 2025-12-02 18:59:55,820 | INFO     | process IDs to be killed: [2309669] (in reverse order)
[2025-12-02 14:00:49] 2025-12-02 18:59:55,876 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 14:00:49] 2025-12-02 18:59:55,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 14:00:49] 2025-12-02 18:59:55,882 | INFO     | did not find any defunct processes belonging to 2309669
[2025-12-02 14:00:49] 2025-12-02 18:59:55,886 | INFO     | did not find any defunct processes belonging to 2309669
[2025-12-02 14:00:49] 2025-12-02 18:59:55,888 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 14:00:49] 2025-12-02 18:59:55,888 | INFO     | ready for new job
[2025-12-02 14:00:49] 2025-12-02 18:59:55,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 14:00:49] 2025-12-02 18:59:55,891 | INFO     | ***************************************
[2025-12-02 14:00:49] 2025-12-02 18:59:55,891 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 14:00:49] 2025-12-02 18:59:55,891 | INFO     | ***************************************
[2025-12-02 14:00:49] 2025-12-02 18:59:55,891 | INFO     | 
[2025-12-02 14:00:49] 2025-12-02 18:59:55,893 | INFO     | architecture information:
[2025-12-02 14:00:49] 2025-12-02 18:59:55,894 | INFO     | executing command: cat /etc/os-release
[2025-12-02 14:00:49] 2025-12-02 18:59:55,906 | INFO     | cat /etc/os-release:
[2025-12-02 14:00:49] NAME="CentOS Linux"
[2025-12-02 14:00:49] VERSION="7 (Core)"
[2025-12-02 14:00:49] ID="centos"
[2025-12-02 14:00:49] ID_LIKE="rhel fedora"
[2025-12-02 14:00:49] VERSION_ID="7"
[2025-12-02 14:00:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 14:00:49] ANSI_COLOR="0;31"
[2025-12-02 14:00:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 14:00:49] HOME_URL="https://www.centos.org/"
[2025-12-02 14:00:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 14:00:49] 
[2025-12-02 14:00:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 14:00:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 14:00:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 14:00:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 14:00:49] 
[2025-12-02 14:00:49] 2025-12-02 18:59:55,906 | INFO     | ***************************************
[2025-12-02 14:00:49] 2025-12-02 18:59:56,409 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-02 14:00:49] 2025-12-02 18:59:56,423 | INFO     | sufficient remaining disk space (38705037312 B)
[2025-12-02 14:00:49] 2025-12-02 18:59:56,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 14:00:49] 2025-12-02 18:59:56,424 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 14:00:49] 2025-12-02 18:59:56,424 | INFO     | update_server=False
[2025-12-02 14:00:49] 2025-12-02 18:59:56,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 14:00:49] 2025-12-02 18:59:56,424 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 14:00:49] 2025-12-02 18:59:56,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 14:00:49] 2025-12-02 18:59:57,006 | INFO     | all payload control threads have been joined
[2025-12-02 14:00:49] 2025-12-02 18:59:57,017 | INFO     | all job control threads have been joined
[2025-12-02 14:00:49] 2025-12-02 18:59:57,207 | INFO     | all data control threads have been joined
[2025-12-02 14:00:49] 2025-12-02 18:59:57,259 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 14:00:49] 2025-12-02 18:59:57,259 | INFO     | aborting loop
[2025-12-02 14:00:49] 2025-12-02 18:59:57,426 | INFO     | [job] retrieve thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:57,430 | INFO     | [job] queue monitor thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:57,731 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:58,012 | INFO     | [payload] control thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:58,023 | INFO     | [job] control thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:58,036 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:58,076 | INFO     | [payload] validate_post thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:58,212 | INFO     | [data] control thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:58,265 | INFO     | [job] job monitor thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:58,549 | INFO     | [data] copytool_in thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:58,570 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:58,801 | INFO     | [job] validate thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:58,886 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:58,915 | INFO     | [data] copytool_out thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:58,927 | INFO     | [payload] failed_post thread has finished
[2025-12-02 14:00:49] 2025-12-02 18:59:59,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 14:00:49] 2025-12-02 19:00:03,277 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 14:00:49] 2025-12-02 19:00:26,591 | INFO     | PID=2302627 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 14:00:49] 2025-12-02 19:00:26,591 | INFO     | .. there are 3 such processes running
[2025-12-02 14:00:49] 2025-12-02 19:00:26,592 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 14:00:49] 2025-12-02 19:00:26,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 14:00:49] 2025-12-02 19:00:26,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 14:00:49] 2025-12-02 19:00:42,710 | INFO     | [monitor] cgroup control has ended
[2025-12-02 14:00:49] 2025-12-02 19:00:44,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139742370236224)>', '<ExcThread(monitor, started 139742020609792)>']
[2025-12-02 14:00:49] 2025-12-02 19:00:44,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 14:00:49] 2025-12-02 19:00:44,681 | INFO     | [monitor] control thread has ended
[2025-12-02 14:00:49] 2025-12-02 19:00:49,274 | INFO     | all workflow threads have been joined
[2025-12-02 14:00:49] 2025-12-02 19:00:49,274 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 14:00:49] 2025-12-02 19:00:49,274 | INFO     | traces error code: 0
[2025-12-02 14:00:49] 2025-12-02 19:00:49,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 14:00:49] 2025-12-02 19:00:49,374 [wrapper] ==== pilot stdout END ====
[2025-12-02 14:00:49] 2025-12-02 19:00:49,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 14:00:49] 2025-12-02 19:00:49,379 [wrapper] pilotpid: 2302627
[2025-12-02 14:00:49] 2025-12-02 19:00:49,381 [wrapper] Pilot exit status: 0
[2025-12-02 14:00:49] 2025-12-02 19:00:49,389 [wrapper] pandaids: 6900761833
[2025-12-02 14:00:49] 2025-12-02 19:00:49,426 [wrapper] cleanup supervisor_pilot 2730851 2302628
[2025-12-02 14:00:49] 2025-12-02 19:00:49,429 [wrapper] Test setup, not cleaning
[2025-12-02 14:00:49] 2025-12-02 19:00:49,431 [wrapper] apfmon messages muted
[2025-12-02 14:00:49] 2025-12-02 19:00:49,434 [wrapper] ==== wrapper stdout END ====
[2025-12-02 14:00:49] 2025-12-02 19:00:49,436 [wrapper] ==== wrapper stderr END ====
[2025-12-02 14:00:49]  *** Error codes and diagnostics ***
[2025-12-02 14:00:49]     "exeErrorCode": 0,
[2025-12-02 14:00:49]     "exeErrorDiag": "",
[2025-12-02 14:00:49]     "pilotErrorCode": 0,
[2025-12-02 14:00:49]     "pilotErrorDiag": "",
[2025-12-02 14:00:49]  *** Listing of results directory ***
[2025-12-02 14:00:49] total 1068572
[2025-12-02 14:00:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 29 04:19 pilot3.tar.gz
[2025-12-02 14:00:49] -rwx------. 1 boincer umatlas     36292 Nov 29 04:19 runpilot2-wrapper.sh
[2025-12-02 14:00:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 29 04:19 queuedata.json
[2025-12-02 14:00:49] -rw-r--r--. 1 boincer umatlas       100 Dec  2 06:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 14:00:49] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 06:22 run_atlas
[2025-12-02 14:00:49] -rw-r--r--. 1 boincer umatlas       105 Dec  2 06:22 job.xml
[2025-12-02 14:00:49] -rw-r--r--. 2 boincer umatlas 378130889 Dec  2 06:22 EVNT.47530775._000069.pool.root.1
[2025-12-02 14:00:49] -rw-r--r--. 2 boincer umatlas    590112 Dec  2 06:22 input.tar.gz
[2025-12-02 14:00:49] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 06:22 start_atlas.sh
[2025-12-02 14:00:49] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 06:22 shared
[2025-12-02 14:00:49] -rw-r--r--. 1 boincer umatlas         0 Dec  2 06:22 boinc_lockfile
[2025-12-02 14:00:49] -rw-r--r--. 1 boincer umatlas      2875 Dec  2 06:22 pandaJob.out
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas    986783 Dec  2 06:22 agis_schedconf.cvmfs.json
[2025-12-02 14:00:49] drwx------. 5 boincer umatlas      4096 Dec  2 06:22 pilot3
[2025-12-02 14:00:49] -rw-r--r--. 1 boincer umatlas       533 Dec  2 13:49 boinc_task_state.xml
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas 700403102 Dec  2 13:59 HITS.47530783._000681.pool.root.1
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas      1043 Dec  2 13:59 memory_monitor_summary.json
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas   1516240 Dec  2 13:59 agis_ddmendpoints.agis.ALL.json
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas   1955414 Dec  2 13:59 log.47530783._000681.job.log.tgz.1
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas     27923 Dec  2 13:59 heartbeat.json
[2025-12-02 14:00:49] -rw-r--r--. 1 boincer umatlas      6527 Dec  2 14:00 init_data.xml
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas        95 Dec  2 14:00 pilot_heartbeat.json
[2025-12-02 14:00:49] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 14:00 boinc_mmap_file
[2025-12-02 14:00:49] -rw-r--r--. 1 boincer umatlas        29 Dec  2 14:00 wrapper_checkpoint.txt
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas      4823 Dec  2 14:00 pilotlog.txt
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas   3914415 Dec  2 14:00 log.47530783._000681.job.log.1
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas       353 Dec  2 14:00 output.list
[2025-12-02 14:00:49] -rw-r--r--. 1 boincer umatlas       620 Dec  2 14:00 runtime_log
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas   5908480 Dec  2 14:00 result.tar.gz
[2025-12-02 14:00:49] -rw-r--r--. 1 boincer umatlas      8818 Dec  2 14:00 runtime_log.err
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas       659 Dec  2 14:00 H1vLDmmHWj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnfLKDmqz4UJn.diag
[2025-12-02 14:00:49] -rw-r--r--. 1 boincer umatlas     21333 Dec  2 14:00 stderr.txt
[2025-12-02 14:00:49] HITS file was successfully produced:
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas 700403102 Dec  2 13:59 shared/HITS.pool.root.1
[2025-12-02 14:00:49]  *** Contents of shared directory: ***
[2025-12-02 14:00:49] total 1059632
[2025-12-02 14:00:49] -rw-r--r--. 2 boincer umatlas 378130889 Dec  2 06:22 ATLAS.root_0
[2025-12-02 14:00:49] -rw-r--r--. 2 boincer umatlas    590112 Dec  2 06:22 input.tar.gz
[2025-12-02 14:00:49] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 06:22 start_atlas.sh
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas 700403102 Dec  2 13:59 HITS.pool.root.1
[2025-12-02 14:00:49] -rw-------. 1 boincer umatlas   5908480 Dec  2 14:00 result.tar.gz
14:00:51 (2298926): run_atlas exited; CPU time 240020.087606
14:00:51 (2298926): called boinc_finish(0)

</stderr_txt>
]]>

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