Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:55:17 (1998340): wrapper (7.7.26015): starting
00:55:17 (1998340): wrapper: running run_atlas (--nthreads 9)
[2025-12-02 00:55:17] Arguments: --nthreads 9
[2025-12-02 00:55:17] Threads: 9
[2025-12-02 00:55:17] Checking for CVMFS
[2025-12-02 00:55:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 00:55:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 00:55:17] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 00:55:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 00:55:17] 2.13.3.0 4548 1979 88408 153545 2 64 5685682 37030913 1888 16776704 0 2416054 99.693 757415 48166 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 00:55:17] CVMFS is ok
[2025-12-02 00:55:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 00:55:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 00:55:17] Further information can be found at the LHC@home message board.
[2025-12-02 00:55:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 00:55:17] Checking for apptainer binary...
[2025-12-02 00:55:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 00:55:17] Running /usr/bin/apptainer --version
[2025-12-02 00:55:17] apptainer version 1.4.4-1.el9
[2025-12-02 00:55:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 00:55:18] c-205-36.aglt2.org
[2025-12-02 00:55:18] apptainer works
[2025-12-02 00:55:18] Set ATHENA_PROC_NUMBER=9
[2025-12-02 00:55:18] Set ATHENA_CORE_NUMBER=9
[2025-12-02 00:55:18] Starting ATLAS job with PandaID=6901249335
[2025-12-02 00:55:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 08:28:16]  *** The last 200 lines of the pilot log: ***
[2025-12-02 08:28:16] 2025-12-02 13:27:26,065 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 08:28:16] 2025-12-02 13:27:26,071 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2731.1561875
[2025-12-02 08:28:16] 2025-12-02 13:27:26,078 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6901249335/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 08:28:16] 2025-12-02 13:27:26,078 | INFO     | extracted standard info from prmon json
[2025-12-02 08:28:16] 2025-12-02 13:27:26,079 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 08:28:16] 2025-12-02 13:27:26,079 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 08:28:16] 2025-12-02 13:27:26,088 | INFO     | fitting pss+swap vs Time
[2025-12-02 08:28:16] 2025-12-02 13:27:26,089 | INFO     | sum of square deviations: 27140955395.0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,094 | INFO     | sum of deviations: 410064489083.5
[2025-12-02 08:28:16] 2025-12-02 13:27:26,094 | INFO     | mean x: 1764668466.5
[2025-12-02 08:28:16] 2025-12-02 13:27:26,094 | INFO     | mean y: 3576202.231981982
[2025-12-02 08:28:16] 2025-12-02 13:27:26,094 | INFO     | intersect: -26658266116.34738
[2025-12-02 08:28:16] 2025-12-02 13:27:26,095 | INFO     | chi2: 5.00932153399223
[2025-12-02 08:28:16] 2025-12-02 13:27:26,096 | INFO     | sum of square deviations: 26234315140.0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,101 | INFO     | sum of deviations: 561071351670.9999
[2025-12-02 08:28:16] 2025-12-02 13:27:26,101 | INFO     | mean x: 1764668314.0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,101 | INFO     | mean y: 3601565.437357631
[2025-12-02 08:28:16] 2025-12-02 13:27:26,102 | INFO     | intersect: -37737228751.77307
[2025-12-02 08:28:16] 2025-12-02 13:27:26,102 | INFO     | chi2: 2.746630781445083
[2025-12-02 08:28:16] 2025-12-02 13:27:26,102 | INFO     | current chi2=2.746630781445083 (change=45.169605049166655 %)
[2025-12-02 08:28:16] 2025-12-02 13:27:26,103 | INFO     | sum of square deviations: 25348093872.5
[2025-12-02 08:28:16] 2025-12-02 13:27:26,108 | INFO     | sum of deviations: 585606567412.5
[2025-12-02 08:28:16] 2025-12-02 13:27:26,108 | INFO     | mean x: 1764668161.5
[2025-12-02 08:28:16] 2025-12-02 13:27:26,108 | INFO     | mean y: 3605742.6658986174
[2025-12-02 08:28:16] 2025-12-02 13:27:26,108 | INFO     | intersect: -40764795616.273094
[2025-12-02 08:28:16] 2025-12-02 13:27:26,109 | INFO     | chi2: 2.472679211787209
[2025-12-02 08:28:16] 2025-12-02 13:27:26,109 | INFO     | current chi2=2.472679211787209 (change=9.974095226360934 %)
[2025-12-02 08:28:16] 2025-12-02 13:27:26,109 | INFO     | right removable region: 433
[2025-12-02 08:28:16] 2025-12-02 13:27:26,110 | INFO     | sum of square deviations: 26234315140.0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,114 | INFO     | sum of deviations: 255742550386.0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,115 | INFO     | mean x: 1764668619.0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,115 | INFO     | mean y: 3602086.4077448747
[2025-12-02 08:28:16] 2025-12-02 13:27:26,115 | INFO     | intersect: -17199090295.719387
[2025-12-02 08:28:16] 2025-12-02 13:27:26,115 | INFO     | chi2: 2.634447989326901
[2025-12-02 08:28:16] 2025-12-02 13:27:26,116 | INFO     | current chi2=2.634447989326901 (change=47.409085812318565 %)
[2025-12-02 08:28:16] 2025-12-02 13:27:26,116 | INFO     | sum of square deviations: 25348093872.5
[2025-12-02 08:28:16] 2025-12-02 13:27:26,121 | INFO     | sum of deviations: 227551134670.0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,121 | INFO     | mean x: 1764668771.5
[2025-12-02 08:28:16] 2025-12-02 13:27:26,122 | INFO     | mean y: 3606930.543778802
[2025-12-02 08:28:16] 2025-12-02 13:27:26,122 | INFO     | intersect: -15837914853.7503
[2025-12-02 08:28:16] 2025-12-02 13:27:26,122 | INFO     | chi2: 2.603501492002685
[2025-12-02 08:28:16] 2025-12-02 13:27:26,123 | INFO     | current chi2=2.603501492002685 (change=1.1746862131874152 %)
[2025-12-02 08:28:16] 2025-12-02 13:27:26,123 | INFO     | left removable region: 20
[2025-12-02 08:28:16] 2025-12-02 13:27:26,123 | INFO     | sum of square deviations: 21843691422.0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,128 | INFO     | sum of deviations: 368404990148.0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,128 | INFO     | mean x: 1764668741.0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,128 | INFO     | mean y: 3643531.6198547217
[2025-12-02 08:28:16] 2025-12-02 13:27:26,129 | INFO     | intersect: -29758394284.379677
[2025-12-02 08:28:16] 2025-12-02 13:27:26,129 | INFO     | chi2: 0.03053467093380541
[2025-12-02 08:28:16] 2025-12-02 13:27:26,129 | INFO     | current memory leak: 16.87 B/s (using 413 data points, chi2=0.03)
[2025-12-02 08:28:16] 2025-12-02 13:27:26,130 | INFO     | could have reported an average CPU frequency of 2621 MHz (18 samples)
[2025-12-02 08:28:16] 2025-12-02 13:27:26,130 | INFO     | ..............................
[2025-12-02 08:28:16] 2025-12-02 13:27:26,130 | INFO     | . Timing measurements:
[2025-12-02 08:28:16] 2025-12-02 13:27:26,131 | INFO     | . get job = 0 s
[2025-12-02 08:28:16] 2025-12-02 13:27:26,131 | INFO     | . initial setup = 2 s
[2025-12-02 08:28:16] 2025-12-02 13:27:26,131 | INFO     | . payload setup = 8 s
[2025-12-02 08:28:16] 2025-12-02 13:27:26,131 | INFO     | . stage-in = 0 s
[2025-12-02 08:28:16] 2025-12-02 13:27:26,131 | INFO     | . payload execution = 27082 s
[2025-12-02 08:28:16] 2025-12-02 13:27:26,131 | INFO     | . stage-out = 3 s
[2025-12-02 08:28:16] 2025-12-02 13:27:26,131 | INFO     | . log creation = 0 s
[2025-12-02 08:28:16] 2025-12-02 13:27:26,131 | INFO     | ..............................
[2025-12-02 08:28:16] 2025-12-02 13:27:26,391 | INFO     | time since job start (27118s) is within the limit (172800.0s)
[2025-12-02 08:28:16] 2025-12-02 13:27:26,554 | INFO     | 
[2025-12-02 08:28:16] 2025-12-02 13:27:26,554 | INFO     | job summary report
[2025-12-02 08:28:16] 2025-12-02 13:27:26,554 | INFO     | --------------------------------------------------
[2025-12-02 08:28:16] 2025-12-02 13:27:26,555 | INFO     | PanDA job id: 6901249335
[2025-12-02 08:28:16] 2025-12-02 13:27:26,555 | INFO     | task id: 47531058
[2025-12-02 08:28:16] 2025-12-02 13:27:26,555 | INFO     | errors: (none)
[2025-12-02 08:28:16] 2025-12-02 13:27:26,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 08:28:16] 2025-12-02 13:27:26,555 | INFO     | pilot state: finished 
[2025-12-02 08:28:16] 2025-12-02 13:27:26,555 | INFO     | transexitcode: 0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,555 | INFO     | exeerrorcode: 0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,555 | INFO     | exeerrordiag: 
[2025-12-02 08:28:16] 2025-12-02 13:27:26,556 | INFO     | exitcode: 0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,556 | INFO     | exitmsg: OK
[2025-12-02 08:28:16] 2025-12-02 13:27:26,556 | INFO     | cpuconsumptiontime: 237668 s
[2025-12-02 08:28:16] 2025-12-02 13:27:26,556 | INFO     | nevents: 1000
[2025-12-02 08:28:16] 2025-12-02 13:27:26,556 | INFO     | neventsw: 0
[2025-12-02 08:28:16] 2025-12-02 13:27:26,556 | INFO     | pid: 2009109
[2025-12-02 08:28:16] 2025-12-02 13:27:26,556 | INFO     | pgrp: 2009109
[2025-12-02 08:28:16] 2025-12-02 13:27:26,556 | INFO     | corecount: 9
[2025-12-02 08:28:16] 2025-12-02 13:27:26,556 | INFO     | event service: False
[2025-12-02 08:28:16] 2025-12-02 13:27:26,557 | INFO     | sizes: {0: 2284339, 1: 2284453, 4: 2284743, 11: 2284771, 27094: 2340799, 27098: 2349977, 27104: 2350195}
[2025-12-02 08:28:16] 2025-12-02 13:27:26,557 | INFO     | --------------------------------------------------
[2025-12-02 08:28:16] 2025-12-02 13:27:26,557 | INFO     | 
[2025-12-02 08:28:16] 2025-12-02 13:27:26,557 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-02 08:28:16] 2025-12-02 13:27:26,573 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,573 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,574 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,574 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,575 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,575 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,575 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,575 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,575 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,575 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 08:28:16] 2025-12-02 13:27:26,576 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,576 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 08:28:16] 2025-12-02 13:27:26,576 | INFO     | job 6901249335 has completed (purged errors)
[2025-12-02 08:28:16] 2025-12-02 13:27:26,576 | INFO     | overall cleanup function is called
[2025-12-02 08:28:16] 2025-12-02 13:27:27,593 | INFO     | --- collectZombieJob: --- 10, [2009109]
[2025-12-02 08:28:16] 2025-12-02 13:27:27,593 | INFO     | zombie collector waiting for pid 2009109
[2025-12-02 08:28:16] 2025-12-02 13:27:27,593 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 08:28:16] 2025-12-02 13:27:27,593 | INFO     | collected zombie processes
[2025-12-02 08:28:16] 2025-12-02 13:27:27,593 | INFO     | will attempt to kill all subprocesses of pid=2009109
[2025-12-02 08:28:16] 2025-12-02 13:27:27,791 | INFO     | process IDs to be killed: [2009109] (in reverse order)
[2025-12-02 08:28:16] 2025-12-02 13:27:27,847 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 08:28:16] 2025-12-02 13:27:27,848 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 08:28:16] 2025-12-02 13:27:27,853 | INFO     | did not find any defunct processes belonging to 2009109
[2025-12-02 08:28:16] 2025-12-02 13:27:27,858 | INFO     | did not find any defunct processes belonging to 2009109
[2025-12-02 08:28:16] 2025-12-02 13:27:27,860 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 08:28:16] 2025-12-02 13:27:27,860 | INFO     | ready for new job
[2025-12-02 08:28:16] 2025-12-02 13:27:27,860 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 08:28:16] 2025-12-02 13:27:27,863 | INFO     | ***************************************
[2025-12-02 08:28:16] 2025-12-02 13:27:27,863 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 08:28:16] 2025-12-02 13:27:27,863 | INFO     | ***************************************
[2025-12-02 08:28:16] 2025-12-02 13:27:27,863 | INFO     | 
[2025-12-02 08:28:16] 2025-12-02 13:27:27,865 | INFO     | architecture information:
[2025-12-02 08:28:16] 2025-12-02 13:27:27,866 | INFO     | executing command: cat /etc/os-release
[2025-12-02 08:28:16] 2025-12-02 13:27:27,877 | INFO     | cat /etc/os-release:
[2025-12-02 08:28:16] NAME="CentOS Linux"
[2025-12-02 08:28:16] VERSION="7 (Core)"
[2025-12-02 08:28:16] ID="centos"
[2025-12-02 08:28:16] ID_LIKE="rhel fedora"
[2025-12-02 08:28:16] VERSION_ID="7"
[2025-12-02 08:28:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 08:28:16] ANSI_COLOR="0;31"
[2025-12-02 08:28:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 08:28:16] HOME_URL="https://www.centos.org/"
[2025-12-02 08:28:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 08:28:16] 
[2025-12-02 08:28:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 08:28:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 08:28:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 08:28:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 08:28:16] 
[2025-12-02 08:28:16] 2025-12-02 13:27:27,877 | INFO     | ***************************************
[2025-12-02 08:28:16] 2025-12-02 13:27:28,380 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-02 08:28:16] 2025-12-02 13:27:28,393 | INFO     | sufficient remaining disk space (39720058880 B)
[2025-12-02 08:28:16] 2025-12-02 13:27:28,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 08:28:16] 2025-12-02 13:27:28,393 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 08:28:16] 2025-12-02 13:27:28,393 | INFO     | update_server=False
[2025-12-02 08:28:16] 2025-12-02 13:27:28,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 08:28:16] 2025-12-02 13:27:28,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 08:28:16] 2025-12-02 13:27:28,394 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-02 08:28:16] 2025-12-02 13:27:28,394 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 08:28:16] 2025-12-02 13:27:28,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 08:28:16] 2025-12-02 13:27:28,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 08:28:16] 2025-12-02 13:27:28,454 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-02 08:28:16] 2025-12-02 13:27:28,455 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-02 08:28:16] 2025-12-02 13:27:28,455 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 08:28:16] 2025-12-02 13:27:28,455 | INFO     | will abort loop
[2025-12-02 08:28:16] 2025-12-02 13:27:29,399 | INFO     | [job] retrieve thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:29,460 | INFO     | [job] job monitor thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:29,476 | INFO     | all payload control threads have been joined
[2025-12-02 08:28:16] 2025-12-02 13:27:29,497 | INFO     | all data control threads have been joined
[2025-12-02 08:28:16] 2025-12-02 13:27:29,629 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:29,663 | INFO     | all job control threads have been joined
[2025-12-02 08:28:16] 2025-12-02 13:27:30,237 | INFO     | [data] copytool_in thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:30,400 | INFO     | [data] copytool_out thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:30,482 | INFO     | [payload] control thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:30,503 | INFO     | [data] control thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:30,539 | INFO     | [payload] validate_post thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:30,608 | INFO     | [job] validate thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:30,668 | INFO     | [job] control thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:30,723 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:30,857 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:30,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 08:28:16] 2025-12-02 13:27:30,997 | INFO     | [payload] failed_post thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:31,248 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 08:28:16] 2025-12-02 13:27:32,250 | INFO     | [job] queue monitor thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:34,991 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:27:38,994 | INFO     | job.realtimelogging is not enabled
[2025-12-02 08:28:16] 2025-12-02 13:27:39,999 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 08:28:16] 2025-12-02 13:28:10,546 | INFO     | [monitor] cgroup control has ended
[2025-12-02 08:28:16] 2025-12-02 13:28:11,277 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656848869184)>', '<ExcThread(monitor, started 139656213550848)>']
[2025-12-02 08:28:16] 2025-12-02 13:28:11,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 08:28:16] 2025-12-02 13:28:11,609 | INFO     | [monitor] control thread has ended
[2025-12-02 08:28:16] 2025-12-02 13:28:16,300 | INFO     | all workflow threads have been joined
[2025-12-02 08:28:16] 2025-12-02 13:28:16,300 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 08:28:16] 2025-12-02 13:28:16,301 | INFO     | traces error code: 0
[2025-12-02 08:28:16] 2025-12-02 13:28:16,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 08:28:16] 2025-12-02 13:28:16,402 [wrapper] ==== pilot stdout END ====
[2025-12-02 08:28:16] 2025-12-02 13:28:16,404 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 08:28:16] 2025-12-02 13:28:16,407 [wrapper] pilotpid: 2002043
[2025-12-02 08:28:16] 2025-12-02 13:28:16,409 [wrapper] Pilot exit status: 0
[2025-12-02 08:28:16] 2025-12-02 13:28:16,417 [wrapper] pandaids: 6901249335
[2025-12-02 08:28:16] 2025-12-02 13:28:16,456 [wrapper] cleanup supervisor_pilot 2431662 2002044
[2025-12-02 08:28:16] 2025-12-02 13:28:16,458 [wrapper] Test setup, not cleaning
[2025-12-02 08:28:16] 2025-12-02 13:28:16,461 [wrapper] apfmon messages muted
[2025-12-02 08:28:16] 2025-12-02 13:28:16,463 [wrapper] ==== wrapper stdout END ====
[2025-12-02 08:28:16] 2025-12-02 13:28:16,466 [wrapper] ==== wrapper stderr END ====
[2025-12-02 08:28:16]  *** Error codes and diagnostics ***
[2025-12-02 08:28:16]     "exeErrorCode": 0,
[2025-12-02 08:28:16]     "exeErrorDiag": "",
[2025-12-02 08:28:16]     "pilotErrorCode": 0,
[2025-12-02 08:28:16]     "pilotErrorDiag": "",
[2025-12-02 08:28:16]  *** Listing of results directory ***
[2025-12-02 08:28:16] total 1077960
[2025-12-02 08:28:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 29 04:19 pilot3.tar.gz
[2025-12-02 08:28:16] -rwx------. 1 boincer umatlas     36292 Nov 29 04:19 runpilot2-wrapper.sh
[2025-12-02 08:28:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 29 04:20 queuedata.json
[2025-12-02 08:28:16] -rw-r--r--. 1 boincer umatlas       100 Dec  2 00:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 08:28:16] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 00:55 run_atlas
[2025-12-02 08:28:16] -rw-r--r--. 1 boincer umatlas       105 Dec  2 00:55 job.xml
[2025-12-02 08:28:16] -rw-r--r--. 2 boincer umatlas 377731314 Dec  2 00:55 EVNT.47531050._000576.pool.root.1
[2025-12-02 08:28:16] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 00:55 shared
[2025-12-02 08:28:16] -rw-r--r--. 2 boincer umatlas    590117 Dec  2 00:55 input.tar.gz
[2025-12-02 08:28:16] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 00:55 start_atlas.sh
[2025-12-02 08:28:16] -rw-r--r--. 1 boincer umatlas         0 Dec  2 00:55 boinc_lockfile
[2025-12-02 08:28:16] -rw-r--r--. 1 boincer umatlas      2880 Dec  2 00:55 pandaJob.out
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas    992001 Dec  2 00:55 agis_schedconf.cvmfs.json
[2025-12-02 08:28:16] drwx------. 5 boincer umatlas      4096 Dec  2 00:55 pilot3
[2025-12-02 08:28:16] -rw-r--r--. 1 boincer umatlas       533 Dec  2 08:18 boinc_task_state.xml
[2025-12-02 08:28:16] -rw-r--r--. 1 boincer umatlas      6527 Dec  2 08:21 init_data.xml
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas        95 Dec  2 08:26 pilot_heartbeat.json
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas 710548820 Dec  2 08:26 HITS.47531058._001919.pool.root.1
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas      1043 Dec  2 08:27 memory_monitor_summary.json
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas   1516240 Dec  2 08:27 agis_ddmendpoints.agis.ALL.json
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas   1931732 Dec  2 08:27 log.47531058._001919.job.log.tgz.1
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas     27476 Dec  2 08:27 heartbeat.json
[2025-12-02 08:28:16] -rw-r--r--. 1 boincer umatlas        29 Dec  2 08:28 wrapper_checkpoint.txt
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas      4810 Dec  2 08:28 pilotlog.txt
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas   3867268 Dec  2 08:28 log.47531058._001919.job.log.1
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas       353 Dec  2 08:28 output.list
[2025-12-02 08:28:16] -rw-r--r--. 1 boincer umatlas       620 Dec  2 08:28 runtime_log
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas   5836800 Dec  2 08:28 result.tar.gz
[2025-12-02 08:28:16] -rw-r--r--. 1 boincer umatlas      8818 Dec  2 08:28 runtime_log.err
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas       659 Dec  2 08:28 AKLLDm9HWj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmb0OKDmbzUrCo.diag
[2025-12-02 08:28:16] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 08:28 boinc_mmap_file
[2025-12-02 08:28:16] -rw-r--r--. 1 boincer umatlas     21118 Dec  2 08:28 stderr.txt
[2025-12-02 08:28:16] HITS file was successfully produced:
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas 710548820 Dec  2 08:26 shared/HITS.pool.root.1
[2025-12-02 08:28:16]  *** Contents of shared directory: ***
[2025-12-02 08:28:16] total 1069080
[2025-12-02 08:28:16] -rw-r--r--. 2 boincer umatlas 377731314 Dec  2 00:55 ATLAS.root_0
[2025-12-02 08:28:16] -rw-r--r--. 2 boincer umatlas    590117 Dec  2 00:55 input.tar.gz
[2025-12-02 08:28:16] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 00:55 start_atlas.sh
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas 710548820 Dec  2 08:26 HITS.pool.root.1
[2025-12-02 08:28:16] -rw-------. 1 boincer umatlas   5836800 Dec  2 08:28 result.tar.gz
08:28:17 (1998340): run_atlas exited; CPU time 238068.943140
08:28:17 (1998340): called boinc_finish(0)

</stderr_txt>
]]>

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