Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:21:08 (3278554): wrapper (7.7.26015): starting
20:21:08 (3278554): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 20:21:08] Arguments: --nthreads 8
[2025-12-02 20:21:08] Threads: 8
[2025-12-02 20:21:08] Checking for CVMFS
[2025-12-02 20:21:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 20:21:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 20:21:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 20:21:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 20:21:10] 2.13.3.0 12601 39463 381072 153576 3 378 17160727 32935936 36378 16776704 0 199304159 99.500 243379153 32292 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 20:21:10] CVMFS is ok
[2025-12-02 20:21:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 20:21:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 20:21:10] Further information can be found at the LHC@home message board.
[2025-12-02 20:21:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 20:21:10] Checking for apptainer binary...
[2025-12-02 20:21:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 20:21:10] Running /usr/bin/apptainer --version
[2025-12-02 20:21:11] apptainer version 1.4.4-1.el9
[2025-12-02 20:21:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 20:21:11] c6-12-27-4.aglt2.org
[2025-12-02 20:21:11] apptainer works
[2025-12-02 20:21:11] Set ATHENA_PROC_NUMBER=8
[2025-12-02 20:21:11] Set ATHENA_CORE_NUMBER=8
[2025-12-02 20:21:11] Starting ATLAS job with PandaID=6898490979
[2025-12-02 20:21:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 15:27:42]  *** The last 200 lines of the pilot log: ***
[2025-12-03 15:27:42] 2025-12-03 20:26:48,557 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 15:27:42] 2025-12-03 20:26:48,573 | INFO     | fitting pss+swap vs Time
[2025-12-03 15:27:42] 2025-12-03 20:26:48,575 | INFO     | sum of square deviations: 439109071315.79193
[2025-12-03 15:27:42] 2025-12-03 20:26:48,599 | INFO     | sum of deviations: 4665101258787.1045
[2025-12-03 15:27:42] 2025-12-03 20:26:48,600 | INFO     | mean x: 1764759329.1745324
[2025-12-03 15:27:42] 2025-12-03 20:26:48,601 | INFO     | mean y: 2849928.535173642
[2025-12-03 15:27:42] 2025-12-03 20:26:48,601 | INFO     | intersect: -18745979248.04922
[2025-12-03 15:27:42] 2025-12-03 20:26:48,602 | INFO     | chi2: 16.587588181949364
[2025-12-03 15:27:42] 2025-12-03 20:26:48,604 | INFO     | sum of square deviations: 433270069399.54346
[2025-12-03 15:27:42] 2025-12-03 20:26:48,630 | INFO     | sum of deviations: 5037608992058.122
[2025-12-03 15:27:42] 2025-12-03 20:26:48,630 | INFO     | mean x: 1764759176.6842575
[2025-12-03 15:27:42] 2025-12-03 20:26:48,630 | INFO     | mean y: 2859659.6717352415
[2025-12-03 15:27:42] 2025-12-03 20:26:48,631 | INFO     | intersect: -20515905252.020252
[2025-12-03 15:27:42] 2025-12-03 20:26:48,632 | INFO     | chi2: 13.474448557087507
[2025-12-03 15:27:42] 2025-12-03 20:26:48,632 | INFO     | current chi2=13.474448557087507 (change=18.767885907907814 %)
[2025-12-03 15:27:42] 2025-12-03 20:26:48,632 | INFO     | right removable region: 1117
[2025-12-03 15:27:42] 2025-12-03 20:26:48,634 | INFO     | sum of square deviations: 433268648041.91095
[2025-12-03 15:27:42] 2025-12-03 20:26:48,661 | INFO     | sum of deviations: 4205359286154.165
[2025-12-03 15:27:42] 2025-12-03 20:26:48,661 | INFO     | mean x: 1764759481.6833632
[2025-12-03 15:27:42] 2025-12-03 20:26:48,661 | INFO     | mean y: 2861932.169946333
[2025-12-03 15:27:42] 2025-12-03 20:26:48,661 | INFO     | intersect: -17126112683.615896
[2025-12-03 15:27:42] 2025-12-03 20:26:48,663 | INFO     | chi2: 12.015208358894629
[2025-12-03 15:27:42] 2025-12-03 20:26:48,663 | INFO     | current chi2=12.015208358894629 (change=27.565067162870637 %)
[2025-12-03 15:27:42] 2025-12-03 20:26:48,664 | INFO     | sum of square deviations: 427480157785.46735
[2025-12-03 15:27:42] 2025-12-03 20:26:48,701 | INFO     | sum of deviations: 3810461507000.0923
[2025-12-03 15:27:42] 2025-12-03 20:26:48,701 | INFO     | mean x: 1764759634.1931715
[2025-12-03 15:27:42] 2025-12-03 20:26:48,701 | INFO     | mean y: 2872336.6181491464
[2025-12-03 15:27:42] 2025-12-03 20:26:48,701 | INFO     | intersect: -15727796169.814344
[2025-12-03 15:27:42] 2025-12-03 20:26:48,703 | INFO     | chi2: 8.822574147598676
[2025-12-03 15:27:42] 2025-12-03 20:26:48,703 | INFO     | current chi2=8.822574147598676 (change=26.571609213355895 %)
[2025-12-03 15:27:42] 2025-12-03 20:26:48,704 | INFO     | sum of square deviations: 421743435941.3099
[2025-12-03 15:27:42] 2025-12-03 20:26:48,731 | INFO     | sum of deviations: 3408537332262.314
[2025-12-03 15:27:42] 2025-12-03 20:26:48,731 | INFO     | mean x: 1764759786.7030685
[2025-12-03 15:27:42] 2025-12-03 20:26:48,731 | INFO     | mean y: 2883019.760830325
[2025-12-03 15:27:42] 2025-12-03 20:26:48,731 | INFO     | intersect: -14259934377.804483
[2025-12-03 15:27:42] 2025-12-03 20:26:48,733 | INFO     | chi2: 5.553710099250724
[2025-12-03 15:27:42] 2025-12-03 20:26:48,733 | INFO     | current chi2=5.553710099250724 (change=37.05113715862247 %)
[2025-12-03 15:27:42] 2025-12-03 20:26:48,734 | INFO     | sum of square deviations: 416058317416.3581
[2025-12-03 15:27:42] 2025-12-03 20:26:48,759 | INFO     | sum of deviations: 3141995176120.3813
[2025-12-03 15:27:42] 2025-12-03 20:26:48,760 | INFO     | mean x: 1764759939.2121487
[2025-12-03 15:27:42] 2025-12-03 20:26:48,760 | INFO     | mean y: 2890168.4342701724
[2025-12-03 15:27:42] 2025-12-03 20:26:48,760 | INFO     | intersect: -13324249282.707157
[2025-12-03 15:27:42] 2025-12-03 20:26:48,761 | INFO     | chi2: 4.308815650423429
[2025-12-03 15:27:42] 2025-12-03 20:26:48,762 | INFO     | current chi2=4.308815650423429 (change=22.415546122856668 %)
[2025-12-03 15:27:42] 2025-12-03 20:26:48,762 | INFO     | left removable region: 40
[2025-12-03 15:27:42] 2025-12-03 20:26:48,763 | INFO     | sum of square deviations: 387323994765.05225
[2025-12-03 15:27:42] 2025-12-03 20:26:48,787 | INFO     | sum of deviations: 3258027486624.566
[2025-12-03 15:27:42] 2025-12-03 20:26:48,787 | INFO     | mean x: 1764760366.194986
[2025-12-03 15:27:42] 2025-12-03 20:26:48,787 | INFO     | mean y: 2909471.5116063138
[2025-12-03 15:27:42] 2025-12-03 20:26:48,787 | INFO     | intersect: -14841607930.144815
[2025-12-03 15:27:42] 2025-12-03 20:26:48,789 | INFO     | chi2: 0.7983960342376694
[2025-12-03 15:27:42] 2025-12-03 20:26:48,789 | INFO     | current memory leak: 8.41 B/s (using 1077 data points, chi2=0.80)
[2025-12-03 15:27:42] 2025-12-03 20:26:48,791 | INFO     | could have reported an average CPU frequency of 2634 MHz (41 samples)
[2025-12-03 15:27:42] 2025-12-03 20:26:48,791 | INFO     | ..............................
[2025-12-03 15:27:42] 2025-12-03 20:26:48,791 | INFO     | . Timing measurements:
[2025-12-03 15:27:42] 2025-12-03 20:26:48,791 | INFO     | . get job = 0 s
[2025-12-03 15:27:42] 2025-12-03 20:26:48,791 | INFO     | . initial setup = 6 s
[2025-12-03 15:27:42] 2025-12-03 20:26:48,791 | INFO     | . payload setup = 52 s
[2025-12-03 15:27:42] 2025-12-03 20:26:48,791 | INFO     | . stage-in = 0 s
[2025-12-03 15:27:42] 2025-12-03 20:26:48,791 | INFO     | . payload execution = 68513 s
[2025-12-03 15:27:42] 2025-12-03 20:26:48,791 | INFO     | . stage-out = 5 s
[2025-12-03 15:27:42] 2025-12-03 20:26:48,791 | INFO     | . log creation = 1 s
[2025-12-03 15:27:42] 2025-12-03 20:26:48,792 | INFO     | ..............................
[2025-12-03 15:27:42] 2025-12-03 20:26:48,847 | INFO     | time since job start (68656s) is within the limit (172800.0s)
[2025-12-03 15:27:42] 2025-12-03 20:26:48,896 | INFO     | 
[2025-12-03 15:27:42] 2025-12-03 20:26:48,896 | INFO     | job summary report
[2025-12-03 15:27:42] 2025-12-03 20:26:48,896 | INFO     | --------------------------------------------------
[2025-12-03 15:27:42] 2025-12-03 20:26:48,897 | INFO     | PanDA job id: 6898490979
[2025-12-03 15:27:42] 2025-12-03 20:26:48,897 | INFO     | task id: 47556161
[2025-12-03 15:27:42] 2025-12-03 20:26:48,897 | INFO     | errors: (none)
[2025-12-03 15:27:42] 2025-12-03 20:26:48,897 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 15:27:42] 2025-12-03 20:26:48,897 | INFO     | pilot state: finished 
[2025-12-03 15:27:42] 2025-12-03 20:26:48,897 | INFO     | transexitcode: 0
[2025-12-03 15:27:42] 2025-12-03 20:26:48,897 | INFO     | exeerrorcode: 0
[2025-12-03 15:27:42] 2025-12-03 20:26:48,898 | INFO     | exeerrordiag: 
[2025-12-03 15:27:42] 2025-12-03 20:26:48,898 | INFO     | exitcode: 0
[2025-12-03 15:27:42] 2025-12-03 20:26:48,898 | INFO     | exitmsg: OK
[2025-12-03 15:27:42] 2025-12-03 20:26:48,898 | INFO     | cpuconsumptiontime: 272799 s
[2025-12-03 15:27:42] 2025-12-03 20:26:48,898 | INFO     | nevents: 1000
[2025-12-03 15:27:42] 2025-12-03 20:26:48,898 | INFO     | neventsw: 0
[2025-12-03 15:27:42] 2025-12-03 20:26:48,898 | INFO     | pid: 3302071
[2025-12-03 15:27:42] 2025-12-03 20:26:48,898 | INFO     | pgrp: 3302071
[2025-12-03 15:27:42] 2025-12-03 20:26:48,898 | INFO     | corecount: 8
[2025-12-03 15:27:42] 2025-12-03 20:26:48,898 | INFO     | event service: False
[2025-12-03 15:27:42] 2025-12-03 20:26:48,898 | INFO     | sizes: {0: 2283488, 2: 2284089, 3: 2284173, 4: 2284229, 5: 2284456, 16: 2284456, 28: 2284612, 38: 2284902, 39: 2284930, 68569: 2340903, 68570: 2340902, 68575: 2350
[2025-12-03 15:27:42] 2025-12-03 20:26:48,898 | INFO     | --------------------------------------------------
[2025-12-03 15:27:42] 2025-12-03 20:26:48,899 | INFO     | 
[2025-12-03 15:27:42] 2025-12-03 20:26:48,899 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-03 15:27:42] 2025-12-03 20:26:48,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,921 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,922 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,922 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,923 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,923 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,924 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 15:27:42] 2025-12-03 20:26:48,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,924 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 15:27:42] 2025-12-03 20:26:48,924 | INFO     | job 6898490979 has completed (purged errors)
[2025-12-03 15:27:42] 2025-12-03 20:26:48,924 | INFO     | overall cleanup function is called
[2025-12-03 15:27:42] 2025-12-03 20:26:49,940 | INFO     | --- collectZombieJob: --- 10, [3302071]
[2025-12-03 15:27:42] 2025-12-03 20:26:49,940 | INFO     | zombie collector waiting for pid 3302071
[2025-12-03 15:27:42] 2025-12-03 20:26:49,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 15:27:42] 2025-12-03 20:26:49,941 | INFO     | collected zombie processes
[2025-12-03 15:27:42] 2025-12-03 20:26:49,941 | INFO     | will attempt to kill all subprocesses of pid=3302071
[2025-12-03 15:27:42] 2025-12-03 20:26:50,431 | INFO     | process IDs to be killed: [3302071] (in reverse order)
[2025-12-03 15:27:42] 2025-12-03 20:26:50,595 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 15:27:42] 2025-12-03 20:26:50,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 15:27:42] 2025-12-03 20:26:50,630 | INFO     | did not find any defunct processes belonging to 3302071
[2025-12-03 15:27:42] 2025-12-03 20:26:50,649 | INFO     | did not find any defunct processes belonging to 3302071
[2025-12-03 15:27:42] 2025-12-03 20:26:50,660 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 15:27:42] 2025-12-03 20:26:50,661 | INFO     | ready for new job
[2025-12-03 15:27:42] 2025-12-03 20:26:50,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 15:27:42] 2025-12-03 20:26:50,666 | INFO     | ***************************************
[2025-12-03 15:27:42] 2025-12-03 20:26:50,667 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 15:27:42] 2025-12-03 20:26:50,667 | INFO     | ***************************************
[2025-12-03 15:27:42] 2025-12-03 20:26:50,667 | INFO     | 
[2025-12-03 15:27:42] 2025-12-03 20:26:50,672 | INFO     | architecture information:
[2025-12-03 15:27:42] 2025-12-03 20:26:50,708 | INFO     | executing command: cat /etc/os-release
[2025-12-03 15:27:42] 2025-12-03 20:26:50,722 | INFO     | cat /etc/os-release:
[2025-12-03 15:27:42] NAME="CentOS Linux"
[2025-12-03 15:27:42] VERSION="7 (Core)"
[2025-12-03 15:27:42] ID="centos"
[2025-12-03 15:27:42] ID_LIKE="rhel fedora"
[2025-12-03 15:27:42] VERSION_ID="7"
[2025-12-03 15:27:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 15:27:42] ANSI_COLOR="0;31"
[2025-12-03 15:27:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 15:27:42] HOME_URL="https://www.centos.org/"
[2025-12-03 15:27:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 15:27:42] 
[2025-12-03 15:27:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 15:27:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 15:27:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 15:27:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 15:27:42] 
[2025-12-03 15:27:42] 2025-12-03 20:26:50,722 | INFO     | ***************************************
[2025-12-03 15:27:42] 2025-12-03 20:26:51,225 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-03 15:27:42] 2025-12-03 20:26:51,250 | INFO     | sufficient remaining disk space (91011153920 B)
[2025-12-03 15:27:42] 2025-12-03 20:26:51,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 15:27:42] 2025-12-03 20:26:51,250 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 15:27:42] 2025-12-03 20:26:51,250 | INFO     | update_server=False
[2025-12-03 15:27:42] 2025-12-03 20:26:51,250 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 15:27:42] 2025-12-03 20:26:51,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 15:27:42] 2025-12-03 20:26:51,251 | INFO     | aborting loop
[2025-12-03 15:27:42] 2025-12-03 20:26:51,348 | INFO     | all payload control threads have been joined
[2025-12-03 15:27:42] 2025-12-03 20:26:51,401 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 15:27:42] 2025-12-03 20:26:51,543 | INFO     | all data control threads have been joined
[2025-12-03 15:27:42] 2025-12-03 20:26:52,111 | INFO     | all job control threads have been joined
[2025-12-03 15:27:42] 2025-12-03 20:26:52,257 | INFO     | [job] job monitor thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:52,258 | INFO     | [job] retrieve thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:52,355 | INFO     | [payload] control thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:52,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:52,549 | INFO     | [data] control thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:52,756 | INFO     | [payload] failed_post thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:52,917 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:52,927 | INFO     | [job] validate thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:53,056 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:53,118 | INFO     | [job] control thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:53,396 | INFO     | [payload] validate_post thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:53,408 | INFO     | [data] copytool_out thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:53,483 | INFO     | [data] copytool_in thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:53,697 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:53,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 15:27:42] 2025-12-03 20:26:54,596 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 15:27:42] 2025-12-03 20:26:54,927 | INFO     | [job] queue monitor thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:26:58,604 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 15:27:42] 2025-12-03 20:27:22,582 | INFO     | PID=3283643 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 15:27:42] 2025-12-03 20:27:22,583 | INFO     | .. there are 26 such processes running
[2025-12-03 15:27:42] 2025-12-03 20:27:22,583 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 15:27:42] 2025-12-03 20:27:22,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 15:27:42] 2025-12-03 20:27:22,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 15:27:42] 2025-12-03 20:27:35,087 | INFO     | [monitor] cgroup control has ended
[2025-12-03 15:27:42] 2025-12-03 20:27:35,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139928838903616)>', '<ExcThread(monitor, started 139928197383936)>']
[2025-12-03 15:27:42] 2025-12-03 20:27:36,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 15:27:42] 2025-12-03 20:27:36,670 | INFO     | [monitor] control thread has ended
[2025-12-03 15:27:42] 2025-12-03 20:27:40,704 | INFO     | all workflow threads have been joined
[2025-12-03 15:27:42] 2025-12-03 20:27:40,704 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 15:27:42] 2025-12-03 20:27:40,705 | INFO     | traces error code: 0
[2025-12-03 15:27:42] 2025-12-03 20:27:40,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 15:27:42] 2025-12-03 20:27:42,114 [wrapper] ==== pilot stdout END ====
[2025-12-03 15:27:42] 2025-12-03 20:27:42,121 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 15:27:42] 2025-12-03 20:27:42,126 [wrapper] pilotpid: 3283643
[2025-12-03 15:27:42] 2025-12-03 20:27:42,130 [wrapper] Pilot exit status: 0
[2025-12-03 15:27:42] 2025-12-03 20:27:42,156 [wrapper] pandaids: 6898490979
[2025-12-03 15:27:42] 2025-12-03 20:27:42,250 [wrapper] cleanup supervisor_pilot 3380200 3283644
[2025-12-03 15:27:42] 2025-12-03 20:27:42,256 [wrapper] Test setup, not cleaning
[2025-12-03 15:27:42] 2025-12-03 20:27:42,259 [wrapper] apfmon messages muted
[2025-12-03 15:27:42] 2025-12-03 20:27:42,262 [wrapper] ==== wrapper stdout END ====
[2025-12-03 15:27:42] 2025-12-03 20:27:42,269 [wrapper] ==== wrapper stderr END ====
[2025-12-03 15:27:42]  *** Error codes and diagnostics ***
[2025-12-03 15:27:42]     "exeErrorCode": 0,
[2025-12-03 15:27:42]     "exeErrorDiag": "",
[2025-12-03 15:27:42]     "pilotErrorCode": 0,
[2025-12-03 15:27:42]     "pilotErrorDiag": "",
[2025-12-03 15:27:42]  *** Listing of results directory ***
[2025-12-03 15:27:42] total 1324000
[2025-12-03 15:27:42] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-12-03 15:27:42] -rwx------. 1 boincer umatlas     36292 Nov 26 11:39 runpilot2-wrapper.sh
[2025-12-03 15:27:42] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:41 queuedata.json
[2025-12-03 15:27:42] -rw-r--r--. 1 boincer umatlas       100 Dec  2 20:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 15:27:42] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 20:21 run_atlas
[2025-12-03 15:27:42] -rw-r--r--. 1 boincer umatlas       105 Dec  2 20:21 job.xml
[2025-12-03 15:27:42] -rw-r--r--. 2 boincer umatlas 408871275 Dec  2 20:21 EVNT.47483658._002659.pool.root.1
[2025-12-03 15:27:42] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 20:21 start_atlas.sh
[2025-12-03 15:27:42] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 20:21 shared
[2025-12-03 15:27:42] -rw-r--r--. 2 boincer umatlas    590101 Dec  2 20:21 input.tar.gz
[2025-12-03 15:27:42] -rw-r--r--. 1 boincer umatlas         0 Dec  2 20:21 boinc_lockfile
[2025-12-03 15:27:42] -rw-r--r--. 1 boincer umatlas      2787 Dec  2 20:21 pandaJob.out
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas        57 Dec  2 20:21 setup.sh.local
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas    989300 Dec  2 20:22 agis_schedconf.cvmfs.json
[2025-12-03 15:27:42] drwx------. 5 boincer umatlas      4096 Dec  2 20:22 pilot3
[2025-12-03 15:27:42] -rw-r--r--. 1 boincer umatlas       533 Dec  3 15:15 boinc_task_state.xml
[2025-12-03 15:27:42] -rw-r--r--. 1 boincer umatlas      6880 Dec  3 15:22 init_data.xml
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas 921804838 Dec  3 15:25 HITS.47556161._006419.pool.root.1
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas      1072 Dec  3 15:26 memory_monitor_summary.json
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas        95 Dec  3 15:26 pilot_heartbeat.json
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas   1516240 Dec  3 15:26 agis_ddmendpoints.agis.ALL.json
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas   2220852 Dec  3 15:26 log.47556161._006419.job.log.tgz.1
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas      8670 Dec  3 15:26 heartbeat.json
[2025-12-03 15:27:42] -rw-r--r--. 1 boincer umatlas        29 Dec  3 15:27 wrapper_checkpoint.txt
[2025-12-03 15:27:42] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 15:27 boinc_mmap_file
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas      4824 Dec  3 15:27 pilotlog.txt
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas   8368062 Dec  3 15:27 log.47556161._006419.job.log.1
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas       353 Dec  3 15:27 output.list
[2025-12-03 15:27:42] -rw-r--r--. 1 boincer umatlas       620 Dec  3 15:27 runtime_log
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas  10608640 Dec  3 15:27 result.tar.gz
[2025-12-03 15:27:42] -rw-r--r--. 1 boincer umatlas      9353 Dec  3 15:27 runtime_log.err
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas       667 Dec  3 15:27 L3MKDmwiXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLJNKDmI6mFum.diag
[2025-12-03 15:27:42] -rw-r--r--. 1 boincer umatlas     21202 Dec  3 15:27 stderr.txt
[2025-12-03 15:27:42] HITS file was successfully produced:
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas 921804838 Dec  3 15:25 shared/HITS.pool.root.1
[2025-12-03 15:27:42]  *** Contents of shared directory: ***
[2025-12-03 15:27:42] total 1310460
[2025-12-03 15:27:42] -rw-r--r--. 2 boincer umatlas 408871275 Dec  2 20:21 ATLAS.root_0
[2025-12-03 15:27:42] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 20:21 start_atlas.sh
[2025-12-03 15:27:42] -rw-r--r--. 2 boincer umatlas    590101 Dec  2 20:21 input.tar.gz
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas 921804838 Dec  3 15:25 HITS.pool.root.1
[2025-12-03 15:27:42] -rw-------. 1 boincer umatlas  10608640 Dec  3 15:27 result.tar.gz
15:27:44 (3278554): run_atlas exited; CPU time 275488.418192
15:27:44 (3278554): called boinc_finish(0)

</stderr_txt>
]]>

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